![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 110 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision cb61484e15676f5193c68158b2dbf39b585f2360 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Commit message: "Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f" > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 99 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-21 00:44:05,206 [ scc.config] DEBUG Found github.token 2024-06-21 00:44:05,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-21 00:44:05,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:44:05,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:44:06,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-21 00:44:06,286 [ scc.gh] DEBUG 3679 remaining from 5000 (Reset at 00:06 2024-06-21 00:44:06,287 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:06,292 [ scc.git] DEBUG Check current status 2024-06-21 00:44:06,293 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:06,297 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-21 00:44:06,298 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:06,344 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-21 00:44:06,347 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-21 00:44:06,350 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-21 00:44:06,354 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-21 00:44:06,358 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-21 00:44:06,362 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-21 00:44:06,366 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-21 00:44:06,380 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-21 00:44:06,384 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-21 00:44:06,387 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-21 00:44:06,390 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-21 00:44:06,393 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-21 00:44:06,397 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-21 00:44:06,400 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-21 00:44:06,418 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-21 00:44:06,422 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-21 00:44:06,424 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-21 00:44:06,427 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-21 00:44:06,429 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-21 00:44:06,432 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-21 00:44:06,435 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-21 00:44:06,439 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-21 00:44:06,444 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:06,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-21 00:44:07,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:07,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:08,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:08,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:08,483 [ scc.git] DEBUG Resetting... 2024-06-21 00:44:08,483 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-21 00:44:08,496 [ scc.git] DEBUG HEAD is now at cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-21 00:44:08,496 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-21 00:44:08,628 [ scc.git] DEBUG Check current status 2024-06-21 00:44:08,629 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:08,635 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-21 00:44:08,636 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:08,704 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-21 00:44:08,707 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-21 00:44:08,711 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-21 00:44:08,715 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-21 00:44:08,719 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-21 00:44:08,723 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-21 00:44:08,727 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-21 00:44:08,731 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-21 00:44:08,735 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-21 00:44:08,741 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-21 00:44:08,745 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-21 00:44:08,749 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-21 00:44:08,753 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-21 00:44:08,756 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-21 00:44:08,760 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-21 00:44:08,765 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-21 00:44:08,769 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-21 00:44:08,773 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-21 00:44:08,779 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-21 00:44:08,784 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-21 00:44:08,788 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-21 00:44:08,795 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-21 00:44:08,796 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-21 00:44:08,796 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-21 00:44:08,796 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-21 00:44:08,796 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-21 00:44:08,796 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-21 00:44:08,796 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:44:08,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-06-21 00:44:08,958 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:44:08,958 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:44:08,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:44:08,965 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:44:08,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:44:08,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:44:08,979 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:44:08,986 [ scc.git] DEBUG Already up to date. 2024-06-21 00:44:08,987 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:44:08,987 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:44:08,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:44:08,994 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:44:09,070 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:44:09,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:44:09,078 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:44:09,792 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbf7bfbe460> has no local changes 2024-06-21 00:44:09,792 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:44:09,874 [ scc.git] DEBUG [detached HEAD 8095238] merge master -Dorg -Snone 2024-06-21 00:44:09,874 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-21 00:44:09,874 [ scc.merge] INFO Already up to date. 2024-06-21 00:44:09,874 [ scc.merge] INFO 2024-06-21 00:44:09,874 [ scc.merge] INFO 2024-06-21 00:44:09,874 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-21 00:44:09,874 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/scripts 5a90893..c20d273 develop -> origin/develop Submodule path 'scripts': checked out 'c20d2734b711c659cecea83db6e2ebd7b7013636' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-21 00:44:19,490 [ scc.config] DEBUG Found github.token 2024-06-21 00:44:19,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-21 00:44:19,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:44:20,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:44:20,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-21 00:44:20,506 [ scc.gh] DEBUG 3671 remaining from 5000 (Reset at 00:06 2024-06-21 00:44:20,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:20,511 [ scc.git] DEBUG Check current status 2024-06-21 00:44:20,511 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:20,514 [ scc.git] DEBUG 8095238 merge master -Dorg -Snone 2024-06-21 00:44:20,514 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:20,563 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-21 00:44:20,565 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-21 00:44:20,568 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-21 00:44:20,571 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-21 00:44:20,574 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-21 00:44:20,577 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-21 00:44:20,580 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-21 00:44:20,583 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-21 00:44:20,586 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-21 00:44:20,589 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-21 00:44:20,591 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-21 00:44:20,594 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-21 00:44:20,597 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-21 00:44:20,599 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-21 00:44:20,602 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-21 00:44:20,605 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-21 00:44:20,607 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-21 00:44:20,610 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-21 00:44:20,612 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-21 00:44:20,614 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-21 00:44:20,617 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-21 00:44:20,621 [ scc.git] DEBUG +c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-21 00:44:20,625 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:20,626 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-21 00:44:20,627 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-21 00:44:20,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-21 00:44:21,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:21,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:22,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:22,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:22,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:22,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-21 00:44:22,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:22,858 [ scc.git] DEBUG Check current status 2024-06-21 00:44:22,859 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:22,862 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-21 00:44:22,862 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:22,909 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:23,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-21 00:44:23,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:24,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:24,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:25,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:25,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:25,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:25,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-21 00:44:25,052 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:25,058 [ scc.git] DEBUG Check current status 2024-06-21 00:44:25,058 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:25,063 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-21 00:44:25,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:25,113 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:25,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-21 00:44:25,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:26,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:26,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:27,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:27,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:27,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:27,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-21 00:44:27,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:27,232 [ scc.git] DEBUG Check current status 2024-06-21 00:44:27,233 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:27,236 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-21 00:44:27,236 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:27,277 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:27,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-21 00:44:28,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:28,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:29,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:29,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:29,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:29,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:29,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-21 00:44:29,490 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:29,494 [ scc.git] DEBUG Check current status 2024-06-21 00:44:29,494 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:29,497 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-21 00:44:29,498 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:29,537 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:29,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-21 00:44:30,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:30,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:31,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:31,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:31,677 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:31,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:31,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-21 00:44:31,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:31,721 [ scc.git] DEBUG Check current status 2024-06-21 00:44:31,721 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:31,733 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-21 00:44:31,733 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:31,789 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:32,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-21 00:44:32,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:33,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:33,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:33,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:33,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:33,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:33,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-21 00:44:33,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:33,993 [ scc.git] DEBUG Check current status 2024-06-21 00:44:33,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:33,997 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-21 00:44:33,997 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:34,038 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:34,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-21 00:44:34,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:35,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:35,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:36,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:36,183 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:36,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:36,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-21 00:44:36,223 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:36,228 [ scc.git] DEBUG Check current status 2024-06-21 00:44:36,228 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:36,232 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-21 00:44:36,233 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:36,273 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:36,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-21 00:44:37,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:37,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:38,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:38,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:38,443 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:38,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:38,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-21 00:44:38,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:38,491 [ scc.git] DEBUG Check current status 2024-06-21 00:44:38,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:38,495 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-21 00:44:38,495 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:38,535 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:38,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-21 00:44:39,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:39,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:40,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:40,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:40,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:40,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:40,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-21 00:44:40,726 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:40,731 [ scc.git] DEBUG Check current status 2024-06-21 00:44:40,731 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:40,735 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-21 00:44:40,736 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:40,779 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:41,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-21 00:44:41,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:42,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:42,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:42,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:42,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:42,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:42,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-21 00:44:42,946 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:42,952 [ scc.git] DEBUG Check current status 2024-06-21 00:44:42,952 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:42,956 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-21 00:44:42,957 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:43,005 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:43,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-21 00:44:43,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:44,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:44,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:45,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:45,084 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:45,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:45,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-21 00:44:45,123 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:45,128 [ scc.git] DEBUG Check current status 2024-06-21 00:44:45,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:45,133 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-21 00:44:45,133 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:45,177 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:45,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-21 00:44:46,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:46,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:46,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:47,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:47,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:47,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:47,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-21 00:44:47,384 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:47,390 [ scc.git] DEBUG Check current status 2024-06-21 00:44:47,390 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:47,394 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-21 00:44:47,395 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:47,443 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:47,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-21 00:44:48,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:48,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:49,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:49,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:49,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:49,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:49,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-21 00:44:49,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:49,631 [ scc.git] DEBUG Check current status 2024-06-21 00:44:49,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:49,637 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-21 00:44:49,638 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:49,686 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:50,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-21 00:44:50,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:50,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:51,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:51,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:51,783 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:51,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:51,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-21 00:44:51,826 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:51,831 [ scc.git] DEBUG Check current status 2024-06-21 00:44:51,831 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:51,837 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-21 00:44:51,837 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:51,884 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:52,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-21 00:44:52,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:53,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:53,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:53,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:53,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:54,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:54,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-21 00:44:54,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:54,038 [ scc.git] DEBUG Check current status 2024-06-21 00:44:54,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:54,042 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-21 00:44:54,042 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:54,086 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:54,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-21 00:44:54,412 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-21 00:44:54,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-21 00:44:55,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:55,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:56,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:56,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:56,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:56,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:56,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-21 00:44:56,489 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:56,495 [ scc.git] DEBUG Check current status 2024-06-21 00:44:56,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:56,501 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-21 00:44:56,501 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:56,558 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:56,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-21 00:44:57,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:44:57,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:44:58,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:44:58,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:44:58,665 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:44:58,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:44:58,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-21 00:44:58,708 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:44:58,713 [ scc.git] DEBUG Check current status 2024-06-21 00:44:58,713 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:44:58,718 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-21 00:44:58,719 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:44:58,765 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:44:59,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-21 00:44:59,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:00,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:00,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:00,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:00,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:00,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:00,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-21 00:45:00,901 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:45:00,906 [ scc.git] DEBUG Check current status 2024-06-21 00:45:00,906 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:00,911 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-21 00:45:00,911 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:00,963 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:45:00,964 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-21 00:45:01,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-21 00:45:01,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:02,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:02,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:03,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:03,063 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:03,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:03,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-21 00:45:03,109 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:45:03,116 [ scc.git] DEBUG Check current status 2024-06-21 00:45:03,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:03,121 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-21 00:45:03,121 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:03,165 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:45:03,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-21 00:45:03,493 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-21 00:45:03,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-21 00:45:04,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:04,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:05,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:05,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:05,557 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:05,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:05,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-21 00:45:05,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:45:05,604 [ scc.git] DEBUG Check current status 2024-06-21 00:45:05,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:05,610 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-21 00:45:05,610 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:05,658 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:45:05,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-21 00:45:05,984 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-21 00:45:06,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-21 00:45:06,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:07,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:07,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:07,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:07,988 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:08,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:08,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-21 00:45:08,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:45:08,046 [ scc.git] DEBUG Check current status 2024-06-21 00:45:08,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:08,053 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-21 00:45:08,053 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:08,101 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:45:08,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-21 00:45:09,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:09,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:09,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:10,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:10,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:10,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:10,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-21 00:45:10,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-21 00:45:10,316 [ scc.git] DEBUG Check current status 2024-06-21 00:45:10,316 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:10,343 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-21 00:45:10,343 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:10,394 [ scc.config] DEBUG Found remote.origin.url 2024-06-21 00:45:10,395 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-21 00:45:10,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-21 00:45:10,691 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-21 00:45:10,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-21 00:45:11,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-21 00:45:11,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-21 00:45:12,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:12,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-21 00:45:12,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:12,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:12,759 [ scc.git] DEBUG Resetting... 2024-06-21 00:45:12,759 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-21 00:45:12,770 [ scc.git] DEBUG HEAD is now at 8095238 merge master -Dorg -Snone 2024-06-21 00:45:12,771 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-21 00:45:12,882 [ scc.git] DEBUG Submodule path 'scripts': checked out '5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-21 00:45:12,885 [ scc.git] DEBUG Check current status 2024-06-21 00:45:12,885 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-21 00:45:12,891 [ scc.git] DEBUG 8095238 merge master -Dorg -Snone 2024-06-21 00:45:12,891 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-21 00:45:12,938 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-21 00:45:12,941 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-21 00:45:12,945 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-21 00:45:12,948 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-21 00:45:12,952 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-21 00:45:12,956 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-21 00:45:12,959 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-21 00:45:12,962 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-21 00:45:12,965 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-21 00:45:12,968 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-21 00:45:12,971 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-21 00:45:12,974 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-21 00:45:12,977 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-21 00:45:12,979 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-21 00:45:12,983 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-21 00:45:12,985 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-21 00:45:12,988 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-21 00:45:12,990 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-21 00:45:12,993 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-21 00:45:12,995 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-21 00:45:12,998 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-21 00:45:13,002 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-21 00:45:13,003 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-21 00:45:13,003 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-21 00:45:13,003 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-21 00:45:13,003 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-21 00:45:13,003 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-21 00:45:13,004 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-21 00:45:13,004 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:13,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-06-21 00:45:13,204 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:13,204 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,211 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:13,218 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:13,218 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:13,224 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:13,231 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:13,232 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:45:13,232 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,238 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:45:13,300 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,305 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:13,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-21 00:45:13,642 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:13,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-21 00:45:13,642 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,648 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:13,652 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:13,652 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:13,657 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:13,662 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:13,662 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:45:13,662 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,667 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:45:13,705 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:13,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:13,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:13,760 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:45:13,766 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736c812dc0> has no local changes 2024-06-21 00:45:13,766 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:45:13,775 [ scc.git] DEBUG [detached HEAD 0a3a063] merge master -Dorg -Ssuccess-only 2024-06-21 00:45:13,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:13,776 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:14,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-21 00:45:14,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-21 00:45:15,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-21 00:45:15,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-21 00:45:16,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:16,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:45:17,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-21 00:45:17,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:17,593 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-21 00:45:18,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-21 00:45:18,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-21 00:45:18,572 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:18,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-21 00:45:18,572 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:18,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:18,578 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:18,583 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:18,583 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:18,589 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:18,594 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:18,595 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-21 00:45:18,976 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-21 00:45:18,976 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-21 00:45:18,982 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:45:18,982 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:18,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:18,988 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-21 00:45:18,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:19,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-21 00:45:19,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:45:19,013 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-21 00:45:19,013 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-21 00:45:19,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:19,180 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:45:19,220 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:19,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:19,226 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:19,267 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:45:19,273 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b74c6a0> has no local changes 2024-06-21 00:45:19,273 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:45:19,281 [ scc.git] DEBUG [detached HEAD f279425] merge master -Dorg -Ssuccess-only 2024-06-21 00:45:19,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:19,282 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:19,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-21 00:45:20,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-21 00:45:20,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-21 00:45:21,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-21 00:45:21,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:22,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-21 00:45:22,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:22,636 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-21 00:45:23,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-21 00:45:23,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-21 00:45:24,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:24,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-21 00:45:25,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:25,012 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-21 00:45:25,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-21 00:45:25,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-21 00:45:26,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-21 00:45:26,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-21 00:45:27,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-21 00:45:27,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:28,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-21 00:45:28,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:28,696 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-21 00:45:29,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-21 00:45:29,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-21 00:45:30,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-21 00:45:30,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-21 00:45:31,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-21 00:45:31,009 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:31,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-21 00:45:31,010 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:31,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:31,019 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:31,025 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:31,026 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:31,035 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:31,043 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:31,043 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-21 00:45:31,556 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-21 00:45:31,557 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-21 00:45:31,564 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-21 00:45:31,939 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-21 00:45:31,939 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-21 00:45:31,944 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-21 00:45:32,378 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-21 00:45:32,378 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-21 00:45:32,384 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:45:32,384 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:32,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:32,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-21 00:45:32,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:32,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-21 00:45:32,436 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:45:32,441 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-21 00:45:32,442 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-21 00:45:32,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:32,616 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-21 00:45:32,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:32,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-21 00:45:32,752 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-21 00:45:32,752 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:45:32,756 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-21 00:45:32,756 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-21 00:45:32,756 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-21 00:45:32,757 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-21 00:45:33,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:33,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-21 00:45:33,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:33,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-21 00:45:33,117 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-21 00:45:33,117 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-21 00:45:33,117 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:45:33,121 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-21 00:45:33,121 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-21 00:45:33,121 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-21 00:45:33,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:33,458 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:45:33,531 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:33,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:33,542 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:33,601 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:45:33,611 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736c812430> has no local changes 2024-06-21 00:45:33,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:45:33,626 [ scc.git] DEBUG [detached HEAD d57f932] merge master -Dorg -Ssuccess-only 2024-06-21 00:45:33,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:33,626 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-21 00:45:34,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-21 00:45:34,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-21 00:45:35,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-21 00:45:35,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-21 00:45:36,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:36,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:45:37,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-21 00:45:38,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:38,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-21 00:45:39,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-21 00:45:39,036 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-21 00:45:39,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-21 00:45:40,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-21 00:45:40,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-21 00:45:41,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-21 00:45:41,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:42,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-21 00:45:42,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:42,543 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-21 00:45:43,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-21 00:45:43,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-21 00:45:44,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-21 00:45:44,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-21 00:45:44,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:45,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-21 00:45:45,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:45,905 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-21 00:45:45,905 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:45,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-21 00:45:45,906 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:45,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:45,911 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:45,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:45,916 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:45,922 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:45,927 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:45,927 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-21 00:45:46,359 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-21 00:45:46,359 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-21 00:45:46,364 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-21 00:45:46,789 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-21 00:45:46,789 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-21 00:45:46,796 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-21 00:45:47,205 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-21 00:45:47,206 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-21 00:45:47,211 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:45:47,211 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:47,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:47,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-21 00:45:47,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:47,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-21 00:45:47,324 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-21 00:45:47,324 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-21 00:45:47,324 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-21 00:45:47,325 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:45:47,326 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:45:47,334 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-21 00:45:47,341 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-21 00:45:47,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:47,496 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-21 00:45:47,505 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-21 00:45:47,512 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-21 00:45:47,517 [ scc.config] DEBUG Found github.token 2024-06-21 00:45:47,517 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-21 00:45:47,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-21 00:45:47,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:47,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-21 00:45:47,565 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-21 00:45:47,565 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-21 00:45:47,565 [ scc.git] DEBUG Auto-merging setup.py 2024-06-21 00:45:47,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-21 00:45:47,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-21 00:45:47,565 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-21 00:45:47,565 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-21 00:45:47,566 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:45:47,566 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:45:47,572 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-21 00:45:47,580 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-21 00:45:47,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:47,900 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-21 00:45:47,907 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-21 00:45:47,913 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-21 00:45:47,918 [ scc.config] DEBUG Found github.token 2024-06-21 00:45:47,918 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-21 00:45:47,919 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-21 00:45:47,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:47,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-21 00:45:47,957 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-21 00:45:47,957 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-21 00:45:47,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:45:47,961 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-21 00:45:47,961 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-21 00:45:47,961 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-21 00:45:47,961 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-21 00:45:47,961 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-21 00:45:47,961 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-21 00:45:48,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:45:48,314 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:45:48,354 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:48,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:48,360 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:45:48,396 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:45:48,403 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b707b50> has no local changes 2024-06-21 00:45:48,403 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:45:48,412 [ scc.git] DEBUG [detached HEAD 2250249] merge master -Dorg -Ssuccess-only 2024-06-21 00:45:48,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:45:48,412 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:45:48,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-21 00:45:49,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-21 00:45:49,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-21 00:45:50,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-21 00:45:50,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:51,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:45:51,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-21 00:45:52,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:52,140 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-21 00:45:52,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-21 00:45:53,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-21 00:45:53,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-21 00:45:54,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:54,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:45:54,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-21 00:45:55,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:55,417 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-21 00:45:55,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-21 00:45:56,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-21 00:45:56,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:45:57,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:45:57,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-21 00:45:58,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:45:58,284 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-21 00:45:58,284 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:45:58,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-21 00:45:58,284 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:45:58,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:45:58,292 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:45:58,300 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:45:58,300 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:45:58,308 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:45:58,315 [ scc.git] DEBUG Already up to date. 2024-06-21 00:45:58,316 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-21 00:45:59,473 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-21 00:45:59,474 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-21 00:45:59,480 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-21 00:46:00,023 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-21 00:46:00,023 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-21 00:46:00,030 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-21 00:46:00,447 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-21 00:46:00,448 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-21 00:46:00,454 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:00,454 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:00,454 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:00,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-21 00:46:00,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:00,476 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-21 00:46:00,669 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:00,676 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-21 00:46:00,677 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-21 00:46:00,677 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-21 00:46:00,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:00,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-21 00:46:00,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:00,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-21 00:46:00,951 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-21 00:46:00,951 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-21 00:46:00,951 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-21 00:46:00,952 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:00,958 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-21 00:46:00,958 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-21 00:46:00,958 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-21 00:46:00,958 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-21 00:46:01,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:01,250 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-21 00:46:01,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:01,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-21 00:46:01,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:01,285 [ scc.git] DEBUG setup.py | 2 +- 2024-06-21 00:46:01,285 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-21 00:46:01,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:01,661 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:01,704 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:01,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:01,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:01,757 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:01,766 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b75c2b0> has no local changes 2024-06-21 00:46:01,766 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:01,777 [ scc.git] DEBUG [detached HEAD 8ad3410a] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:01,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:01,778 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:02,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-21 00:46:02,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-21 00:46:03,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-21 00:46:03,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-21 00:46:04,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:04,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-21 00:46:05,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:05,103 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-21 00:46:05,103 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:05,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-21 00:46:05,103 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:05,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:05,110 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:05,116 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:05,116 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:05,124 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:05,133 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:05,133 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-21 00:46:05,576 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-21 00:46:05,576 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-21 00:46:05,583 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:05,584 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:05,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:05,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-21 00:46:05,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:05,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-21 00:46:05,644 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-21 00:46:05,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:05,647 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-21 00:46:05,647 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-21 00:46:05,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:05,811 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:05,855 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:05,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:05,864 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:05,908 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:05,914 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b75ce20> has no local changes 2024-06-21 00:46:05,915 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:05,923 [ scc.git] DEBUG [detached HEAD 37050d3] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:05,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:05,924 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:06,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-21 00:46:06,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-21 00:46:06,772 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:07,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-21 00:46:07,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:08,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:08,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-21 00:46:09,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:09,335 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-21 00:46:09,335 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:09,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-21 00:46:09,335 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:09,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:09,341 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:09,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:09,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:09,351 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:09,357 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:09,357 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-21 00:46:09,742 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-21 00:46:09,742 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-21 00:46:09,747 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:09,748 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:09,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:09,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-21 00:46:09,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:09,765 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-21 00:46:09,776 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:09,780 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-21 00:46:09,780 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-21 00:46:09,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:09,981 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:10,023 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:10,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:10,030 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:10,072 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:10,082 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b75c310> has no local changes 2024-06-21 00:46:10,083 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:10,094 [ scc.git] DEBUG [detached HEAD bd2e305] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:10,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:10,095 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:10,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-21 00:46:10,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-21 00:46:11,001 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:11,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-21 00:46:12,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:12,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:13,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-21 00:46:13,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:13,658 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-21 00:46:14,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-21 00:46:14,133 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:14,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-21 00:46:15,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:15,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:16,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-21 00:46:16,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:16,743 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-21 00:46:17,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-21 00:46:17,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-21 00:46:18,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-21 00:46:18,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:19,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:19,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-21 00:46:20,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:20,047 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-21 00:46:20,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-21 00:46:21,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-21 00:46:21,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-21 00:46:22,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:22,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:23,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-21 00:46:23,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:23,504 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-21 00:46:23,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-21 00:46:24,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-21 00:46:24,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-21 00:46:25,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:25,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-21 00:46:26,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:26,311 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-21 00:46:26,312 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:26,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-21 00:46:26,312 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:26,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:26,319 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:26,325 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:26,325 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:26,382 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:26,390 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:26,391 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-21 00:46:27,025 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-21 00:46:27,026 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-21 00:46:27,031 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-21 00:46:28,075 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-21 00:46:28,075 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-21 00:46:28,082 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-21 00:46:28,561 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-21 00:46:28,561 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-21 00:46:28,566 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-21 00:46:28,959 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-21 00:46:28,959 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-21 00:46:28,964 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-21 00:46:29,344 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-21 00:46:29,344 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-21 00:46:29,349 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:29,349 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:29,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:29,354 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-21 00:46:29,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:29,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-21 00:46:29,465 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-21 00:46:29,466 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:29,470 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-21 00:46:29,470 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-21 00:46:29,470 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-21 00:46:29,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:29,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-21 00:46:29,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:29,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-21 00:46:29,683 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-21 00:46:29,683 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-21 00:46:29,683 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-21 00:46:29,683 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-21 00:46:29,684 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:29,688 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-21 00:46:29,689 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-21 00:46:29,689 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-21 00:46:29,689 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-21 00:46:29,689 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-21 00:46:29,689 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-21 00:46:29,689 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-21 00:46:29,689 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-21 00:46:30,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:30,040 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-21 00:46:30,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:30,056 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-21 00:46:30,111 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-21 00:46:30,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:30,115 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-21 00:46:30,115 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-21 00:46:30,115 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-21 00:46:30,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:30,464 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-21 00:46:30,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:30,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-21 00:46:30,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:30,536 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-21 00:46:30,536 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-21 00:46:30,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:30,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-21 00:46:30,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:30,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-21 00:46:30,950 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-21 00:46:30,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:31,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:31,266 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:31,305 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:31,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:31,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:31,348 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:31,358 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b734370> has no local changes 2024-06-21 00:46:31,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:31,367 [ scc.git] DEBUG [detached HEAD d3162fc] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:31,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:31,368 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:31,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-21 00:46:32,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-21 00:46:32,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-21 00:46:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-21 00:46:33,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:34,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:34,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-21 00:46:35,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:35,187 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-21 00:46:35,187 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:35,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-21 00:46:35,188 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:35,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:35,199 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:35,206 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:35,207 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:35,213 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:35,220 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:35,220 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-21 00:46:35,598 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-21 00:46:35,599 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-21 00:46:35,604 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:35,604 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:35,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:35,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-21 00:46:35,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:35,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-21 00:46:35,639 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:35,643 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-21 00:46:35,643 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-21 00:46:35,643 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-21 00:46:35,643 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-21 00:46:35,643 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-21 00:46:35,643 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-21 00:46:35,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:35,832 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:35,877 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:35,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:35,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:35,928 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:35,936 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73686cebb0> has no local changes 2024-06-21 00:46:35,936 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:35,947 [ scc.git] DEBUG [detached HEAD f479434] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:35,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:35,948 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:36,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-21 00:46:36,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-21 00:46:37,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-21 00:46:37,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-21 00:46:38,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:38,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-21 00:46:39,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:39,252 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-21 00:46:39,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-21 00:46:40,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-21 00:46:40,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-21 00:46:41,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:41,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-21 00:46:42,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:42,018 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-21 00:46:42,019 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:42,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-21 00:46:42,019 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:42,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:42,026 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:42,032 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:42,032 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:42,039 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:42,047 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:42,048 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-21 00:46:42,531 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-21 00:46:42,532 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-21 00:46:42,538 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-21 00:46:43,817 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-21 00:46:43,817 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-21 00:46:43,822 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:43,823 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:43,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:43,828 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-21 00:46:43,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:43,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-21 00:46:43,914 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-21 00:46:43,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-21 00:46:43,914 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-21 00:46:43,914 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-21 00:46:43,914 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:46:43,915 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:46:43,921 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-21 00:46:43,929 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-21 00:46:44,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:44,101 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-21 00:46:44,109 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-21 00:46:44,115 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-21 00:46:44,120 [ scc.config] DEBUG Found github.token 2024-06-21 00:46:44,120 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-21 00:46:44,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-21 00:46:44,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:44,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-21 00:46:44,181 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-21 00:46:44,181 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-21 00:46:44,181 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-21 00:46:44,181 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:46:44,182 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:46:44,188 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-21 00:46:44,196 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-21 00:46:44,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:44,506 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-21 00:46:44,513 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-21 00:46:44,518 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-21 00:46:44,522 [ scc.config] DEBUG Found github.token 2024-06-21 00:46:44,523 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-21 00:46:44,523 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:44,561 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:44,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:44,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:44,603 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:44,610 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b6f8f40> has no local changes 2024-06-21 00:46:44,611 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:44,620 [ scc.git] DEBUG [detached HEAD 72d81fe] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:44,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:44,620 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:45,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-21 00:46:45,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-21 00:46:45,563 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:46,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-21 00:46:46,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:47,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:47,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-21 00:46:47,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:47,995 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-21 00:46:48,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-21 00:46:48,474 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:49,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-21 00:46:49,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:50,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:50,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-21 00:46:50,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:50,953 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-21 00:46:51,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-21 00:46:51,421 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-21 00:46:51,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-21 00:46:52,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:46:52,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:46:53,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-21 00:46:53,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:46:53,856 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-21 00:46:54,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-21 00:46:54,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-21 00:46:55,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-21 00:46:55,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-21 00:46:56,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-21 00:46:56,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-21 00:46:56,712 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:46:56,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-21 00:46:56,712 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:56,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:56,719 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:46:56,726 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:46:56,726 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:46:56,732 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:46:56,738 [ scc.git] DEBUG Already up to date. 2024-06-21 00:46:56,739 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-21 00:46:57,116 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-21 00:46:57,116 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-21 00:46:57,121 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-21 00:46:57,520 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-21 00:46:57,520 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-21 00:46:57,525 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-21 00:46:57,915 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-21 00:46:57,915 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-21 00:46:57,922 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:46:57,922 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:57,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:57,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-21 00:46:57,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:57,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-21 00:46:57,954 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:57,957 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-21 00:46:57,957 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-21 00:46:58,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:58,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-21 00:46:58,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:58,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-21 00:46:58,207 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-21 00:46:58,207 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:58,211 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-21 00:46:58,211 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-21 00:46:58,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:58,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-21 00:46:58,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:58,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-21 00:46:58,547 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-21 00:46:58,548 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:46:58,551 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-21 00:46:58,551 [ scc.git] DEBUG package.json | 2 +- 2024-06-21 00:46:58,551 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-21 00:46:58,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:46:58,942 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:46:58,983 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:46:58,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:46:58,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:46:59,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:46:59,063 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7368686640> has no local changes 2024-06-21 00:46:59,063 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:46:59,074 [ scc.git] DEBUG [detached HEAD b6f4bc7] merge master -Dorg -Ssuccess-only 2024-06-21 00:46:59,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:46:59,075 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:46:59,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-21 00:46:59,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-21 00:47:00,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-21 00:47:00,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:01,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-21 00:47:01,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:01,821 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-21 00:47:01,821 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:01,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-21 00:47:01,821 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:01,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:01,827 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:01,832 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:01,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:01,838 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:01,844 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:01,845 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-21 00:47:02,209 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-21 00:47:02,210 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-21 00:47:02,214 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:02,214 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:02,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:02,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-21 00:47:02,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:02,233 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-21 00:47:02,243 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:47:02,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:02,412 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:02,455 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:02,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:02,462 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:02,506 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:02,513 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736b703be0> has no local changes 2024-06-21 00:47:02,513 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:03,784 [ scc.git] DEBUG [detached HEAD 74dc8a7] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:03,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:03,785 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:04,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-21 00:47:04,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-21 00:47:04,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-21 00:47:05,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-21 00:47:05,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-21 00:47:06,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:06,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-21 00:47:07,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:07,298 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-21 00:47:07,298 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:07,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-21 00:47:07,298 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:07,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:07,305 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:07,311 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:07,311 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:07,317 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:07,324 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:07,324 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-21 00:47:07,820 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-21 00:47:07,820 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-21 00:47:07,825 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:07,825 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:07,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:07,830 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-21 00:47:07,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:07,842 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-21 00:47:07,852 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-21 00:47:07,853 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:47:07,855 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-21 00:47:07,855 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-21 00:47:08,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:08,031 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:08,077 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:08,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:08,083 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:08,122 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:08,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736863d550> has no local changes 2024-06-21 00:47:08,129 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:08,137 [ scc.git] DEBUG [detached HEAD 6e0a2d4] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:08,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:08,138 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:08,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-21 00:47:09,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-21 00:47:09,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-21 00:47:10,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-21 00:47:10,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:11,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-21 00:47:11,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:11,445 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-21 00:47:11,446 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:11,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-21 00:47:11,446 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:11,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:11,458 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:11,470 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:11,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:11,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:11,503 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:11,504 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-21 00:47:11,935 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-21 00:47:11,935 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-21 00:47:11,942 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:11,942 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:11,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:11,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-21 00:47:11,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:11,970 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-21 00:47:12,039 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG Auto-merging setup.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-21 00:47:12,040 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:47:12,041 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:47:12,051 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-21 00:47:12,059 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-21 00:47:12,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:12,221 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-21 00:47:12,229 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-21 00:47:12,237 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/urls.py - omero_signup/views.py - omero_signup/signup_settings.py --conflicts 2024-06-21 00:47:12,246 [ scc.config] DEBUG Found github.token 2024-06-21 00:47:12,246 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-21 00:47:12,246 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:12,289 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:12,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:12,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:12,339 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:12,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73686aff40> has no local changes 2024-06-21 00:47:12,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:12,355 [ scc.git] DEBUG [detached HEAD 2c69e0f] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:12,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:12,356 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:12,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-21 00:47:13,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-21 00:47:13,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-21 00:47:14,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-21 00:47:14,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:15,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-21 00:47:15,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:15,487 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-21 00:47:15,488 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:15,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-21 00:47:15,488 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:15,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:15,494 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:15,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:15,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:15,508 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:15,516 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:15,516 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-21 00:47:16,021 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-21 00:47:16,022 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-21 00:47:16,028 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:16,028 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:16,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-21 00:47:16,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,048 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-21 00:47:16,096 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-21 00:47:16,099 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-21 00:47:16,100 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-21 00:47:16,102 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-21 00:47:16,102 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-21 00:47:16,103 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-21 00:47:16,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:16,248 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:16,288 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:16,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:16,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:16,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736863d730> has no local changes 2024-06-21 00:47:16,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:16,352 [ scc.git] DEBUG [detached HEAD 7c28f19] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:16,352 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:16,352 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:16,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-21 00:47:16,664 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:16,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-21 00:47:16,664 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:16,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:16,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:16,677 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:16,683 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:16,690 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:16,690 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:16,690 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:16,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,695 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:16,734 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:16,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:16,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:16,782 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:16,788 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736864fb80> has no local changes 2024-06-21 00:47:16,788 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:16,797 [ scc.git] DEBUG [detached HEAD 8b73f93] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:16,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:16,797 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:17,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-21 00:47:17,097 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:17,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-21 00:47:17,097 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:17,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:17,103 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:17,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:17,109 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:17,115 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:17,123 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:17,123 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:17,123 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:17,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:17,132 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:17,180 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:17,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:17,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:17,246 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:17,255 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73686a6d90> has no local changes 2024-06-21 00:47:17,255 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:17,267 [ scc.git] DEBUG [detached HEAD 2a6dbcc] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:17,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:17,269 [ scc.git] INFO Overriding base-branch from master to main 2024-06-21 00:47:17,269 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:17,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-21 00:47:18,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-21 00:47:18,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-21 00:47:19,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-21 00:47:19,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-21 00:47:20,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:20,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-21 00:47:20,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-21 00:47:21,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:21,314 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-21 00:47:21,314 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:21,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-21 00:47:21,315 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:21,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:21,321 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-21 00:47:21,326 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:21,326 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-21 00:47:21,332 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-21 00:47:21,337 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:21,337 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-21 00:47:21,791 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-21 00:47:21,791 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-21 00:47:21,796 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:21,796 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:21,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:21,803 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-21 00:47:21,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:21,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-21 00:47:21,844 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-21 00:47:21,845 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-21 00:47:21,846 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:47:21,846 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:47:21,853 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-21 00:47:21,859 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-21 00:47:22,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:22,020 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-21 00:47:22,028 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-21 00:47:22,034 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-21 00:47:22,039 [ scc.config] DEBUG Found github.token 2024-06-21 00:47:22,040 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-21 00:47:22,040 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:22,084 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,090 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:22,133 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:22,140 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736867eee0> has no local changes 2024-06-21 00:47:22,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:22,149 [ scc.git] DEBUG [detached HEAD 9177a4d] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:22,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:22,150 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:22,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-21 00:47:22,439 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:22,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-21 00:47:22,439 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,447 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:22,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:22,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:22,461 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:22,467 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:22,467 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:22,467 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,472 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:22,511 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:22,556 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:22,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7368653e80> has no local changes 2024-06-21 00:47:22,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:22,571 [ scc.git] DEBUG [detached HEAD 90fe35c] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:22,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:22,572 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:22,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-21 00:47:22,872 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:22,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-21 00:47:22,872 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:22,884 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:22,884 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:22,892 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:22,899 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:22,899 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:22,899 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,907 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:22,952 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:22,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:22,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:23,003 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:23,011 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73685b9400> has no local changes 2024-06-21 00:47:23,011 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:23,022 [ scc.git] DEBUG [detached HEAD 4264819] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:23,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:23,022 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:23,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-21 00:47:23,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-21 00:47:24,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-21 00:47:24,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-21 00:47:25,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:25,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-21 00:47:26,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:26,121 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-21 00:47:26,121 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:26,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-21 00:47:26,121 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:26,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:26,130 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-21 00:47:26,137 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:26,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-21 00:47:26,145 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-21 00:47:26,153 [ scc.git] DEBUG Already up to date. 2024-06-21 00:47:26,154 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-21 00:47:26,620 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-21 00:47:26,621 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-21 00:47:26,626 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:26,626 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:26,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:26,633 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-21 00:47:26,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:26,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-21 00:47:26,697 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-21 00:47:26,697 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-21 00:47:26,697 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:47:26,698 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:47:26,704 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-21 00:47:26,712 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-21 00:47:26,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:26,877 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-21 00:47:26,883 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-21 00:47:26,889 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-21 00:47:26,895 [ scc.config] DEBUG Found github.token 2024-06-21 00:47:26,896 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-21 00:47:26,896 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:26,937 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:26,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:26,943 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:26,985 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:26,992 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73685ffb80> has no local changes 2024-06-21 00:47:26,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:27,002 [ scc.git] DEBUG [detached HEAD 103c865] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:27,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:27,003 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-21 00:47:27,003 [ scc.repo] DEBUG ## PRs found: 2024-06-21 00:47:28,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-21 00:47:28,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-21 00:47:29,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-21 00:47:29,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-21 00:47:30,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-21 00:47:30,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-21 00:47:31,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-21 00:47:31,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-21 00:47:32,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-21 00:47:32,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-21 00:47:32,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-21 00:47:32,914 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-21 00:47:33,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-21 00:47:33,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-21 00:47:34,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-21 00:47:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-21 00:47:34,880 [ scc.repo] DEBUG ## Branches found: 2024-06-21 00:47:34,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-21 00:47:34,880 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:34,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:34,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-21 00:47:34,902 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-21 00:47:34,902 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-21 00:47:34,916 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-21 00:47:34,930 [ scc.git] DEBUG Updating 5a90893..c20d273 2024-06-21 00:47:35,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/221 HTTP/1.1" 200 None 2024-06-21 00:47:35,436 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-21 00:47:35,870 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-21 00:47:35,870 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-21 00:47:35,874 [ scc.git] DEBUG ## Unique users: [] 2024-06-21 00:47:35,875 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:35,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:35,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-21 00:47:35,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:35,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-21 00:47:35,910 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-21 00:47:35,910 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-21 00:47:35,910 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-21 00:47:35,911 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-21 00:47:35,919 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-21 00:47:35,928 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-21 00:47:36,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:36,079 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-21 00:47:36,092 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-21 00:47:36,100 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#103](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-21 00:47:36,107 [ scc.config] DEBUG Found github.token 2024-06-21 00:47:36,108 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-21 00:47:36,108 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-21 00:47:36,150 [ scc.git] DEBUG Get sha1 of %s 2024-06-21 00:47:36,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-21 00:47:36,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:36,197 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:36,204 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f73685f5d60> has no local changes 2024-06-21 00:47:36,204 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 5a90893..c20d273 Previously merged: - PR 221 ehrenfeu 'Fix regression introduced in 6923640' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:36,213 [ scc.git] DEBUG [detached HEAD d0ef7e7] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:36,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:36,213 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-21 00:47:36,289 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-21 00:47:36,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:36,507 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-21 00:47:36,515 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-21 00:47:36,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:36,916 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-21 00:47:36,922 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-21 00:47:37,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:37,317 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-21 00:47:37,322 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-21 00:47:37,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:37,721 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-21 00:47:38,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:38,112 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-21 00:47:38,118 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-21 00:47:38,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:38,536 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-21 00:47:38,542 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-21 00:47:38,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:38,941 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-21 00:47:38,946 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-21 00:47:39,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:39,393 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-21 00:47:39,398 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-21 00:47:39,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:39,813 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-21 00:47:39,819 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-21 00:47:40,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:40,235 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-21 00:47:40,241 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-21 00:47:40,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:40,641 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-21 00:47:40,647 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-21 00:47:41,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:41,073 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-21 00:47:41,085 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-21 00:47:41,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:41,482 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-21 00:47:41,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:41,892 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-21 00:47:42,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:42,300 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-21 00:47:42,305 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-21 00:47:42,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:42,710 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-21 00:47:43,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:43,164 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-21 00:47:43,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:43,580 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-21 00:47:43,585 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-21 00:47:43,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:43,997 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-21 00:47:44,003 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-21 00:47:44,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:44,391 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-21 00:47:44,395 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-21 00:47:44,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:44,804 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-21 00:47:44,809 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-21 00:47:45,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-21 00:47:45,215 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-21 00:47:45,216 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-21 00:47:45,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f736c85d460> has local changes 2024-06-21 00:47:45,291 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 5a90893..c20d273 Previously merged: - PR 221 ehrenfeu 'Fix regression introduced in 6923640' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#103 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/103/)' 2024-06-21 00:47:45,306 [ scc.git] DEBUG [detached HEAD cd797e4] merge master -Dorg -Ssuccess-only 2024-06-21 00:47:45,307 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-21 00:47:45,307 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-21 00:47:45,307 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-21 00:47:45,307 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-21 00:47:45,307 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,307 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-21 00:47:45,307 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,307 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-21 00:47:45,307 [ scc.merge] INFO 2024-06-21 00:47:45,307 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-21 00:47:45,307 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,307 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-21 00:47:45,307 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-21 00:47:45,308 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-21 00:47:45,308 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-21 00:47:45,308 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-21 00:47:45,308 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-21 00:47:45,308 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-21 00:47:45,308 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,308 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-21 00:47:45,308 [ scc.merge] INFO 2024-06-21 00:47:45,308 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-21 00:47:45,309 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-21 00:47:45,309 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-21 00:47:45,309 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-21 00:47:45,309 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-21 00:47:45,309 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-21 00:47:45,309 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,309 [ scc.merge] INFO 2024-06-21 00:47:45,309 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-21 00:47:45,310 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Merged PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-21 00:47:45,310 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO 2024-06-21 00:47:45,310 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-21 00:47:45,310 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,310 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-21 00:47:45,311 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-21 00:47:45,311 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-21 00:47:45,311 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-21 00:47:45,311 [ scc.merge] INFO Already up to date. 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Repository: ome/scripts 2024-06-21 00:47:45,311 [ scc.merge] INFO Excluded PRs: 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-21 00:47:45,311 [ scc.merge] INFO Updating 5a90893..c20d273 2024-06-21 00:47:45,311 [ scc.merge] INFO Previously merged: 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 221 ehrenfeu 'Fix regression introduced in 6923640' 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-21 00:47:45,311 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-21 00:47:45,311 [ scc.merge] INFO 2024-06-21 00:47:45,311 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-21 00:47:45,311 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-21 00:47:45,317 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-21 00:47:45,322 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-21 00:47:45,326 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-21 00:47:45,331 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-21 00:47:45,335 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-21 00:47:45,340 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-21 00:47:45,344 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-21 00:47:45,349 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-21 00:47:45,354 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,359 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-21 00:47:45,359 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-21 00:47:45,364 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-21 00:47:45,368 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-21 00:47:45,373 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-21 00:47:45,378 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-21 00:47:45,383 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,388 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-21 00:47:45,388 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-21 00:47:45,393 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-21 00:47:45,398 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-21 00:47:45,403 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-21 00:47:45,407 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-21 00:47:45,412 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-21 00:47:45,417 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-21 00:47:45,417 [ scc.git] DEBUG Calling 'git remote' 2024-06-21 00:47:45,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 3bd0944] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9ffbc8b7 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 4d2e3f9] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-21 00:48:33,774 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-21 00:48:42,727 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-21 00:48:45,184 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-21 00:48:49,792 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-21 00:49:36,996 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS