![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 116 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision cb61484e15676f5193c68158b2dbf39b585f2360 (refs/remotes/origin/master) Commit message: "Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f" > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 > git rev-list --no-walk cb61484e15676f5193c68158b2dbf39b585f2360 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 [Pipeline] pwd > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 104 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.1 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-27 00:42:16,518 [ scc.config] DEBUG Found github.token 2024-06-27 00:42:16,520 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-27 00:42:16,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:42:17,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:42:17,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-27 00:42:17,574 [ scc.gh] DEBUG 4182 remaining from 5000 (Reset at 01:06 2024-06-27 00:42:17,575 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:17,580 [ scc.git] DEBUG Check current status 2024-06-27 00:42:17,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:17,584 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-27 00:42:17,585 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:17,633 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-27 00:42:17,635 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-27 00:42:17,638 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-27 00:42:17,641 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-27 00:42:17,645 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-27 00:42:17,648 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-27 00:42:17,651 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-27 00:42:17,666 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-27 00:42:17,669 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-27 00:42:17,672 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-27 00:42:17,675 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-27 00:42:17,677 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-27 00:42:17,680 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-27 00:42:17,683 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-27 00:42:17,706 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-27 00:42:17,709 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-27 00:42:17,712 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-27 00:42:17,714 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-27 00:42:17,717 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-27 00:42:17,720 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-27 00:42:17,723 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-27 00:42:17,726 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-27 00:42:17,730 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:18,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-27 00:42:18,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:18,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:19,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:19,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:19,800 [ scc.git] DEBUG Resetting... 2024-06-27 00:42:19,800 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-27 00:42:19,810 [ scc.git] DEBUG HEAD is now at cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-27 00:42:19,811 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-27 00:42:19,938 [ scc.git] DEBUG Check current status 2024-06-27 00:42:19,938 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:19,943 [ scc.git] DEBUG cb61484 Merge pull request #376 from ome/dependabot/submodules/omero-iviewer-a8f380f 2024-06-27 00:42:19,943 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:19,993 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-27 00:42:19,996 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-27 00:42:19,999 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-27 00:42:20,002 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-27 00:42:20,006 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-27 00:42:20,008 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-27 00:42:20,011 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-27 00:42:20,014 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-27 00:42:20,017 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-27 00:42:20,020 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-27 00:42:20,022 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-27 00:42:20,025 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-27 00:42:20,028 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-27 00:42:20,031 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-27 00:42:20,034 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-27 00:42:20,037 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-27 00:42:20,039 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-27 00:42:20,042 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-27 00:42:20,044 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-27 00:42:20,047 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-27 00:42:20,050 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-27 00:42:20,053 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-27 00:42:20,054 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-27 00:42:20,055 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-27 00:42:20,055 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-27 00:42:20,055 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-27 00:42:20,055 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-27 00:42:20,055 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:42:20,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-27 00:42:20,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-27 00:42:20,778 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:42:20,778 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-27 00:42:20,779 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:42:20,779 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:42:20,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:42:20,783 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:42:20,786 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:42:20,787 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:42:20,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:42:20,795 [ scc.git] DEBUG Already up to date. 2024-06-27 00:42:20,795 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-27 00:42:21,178 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-27 00:42:21,178 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-27 00:42:21,183 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:42:21,183 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:42:21,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:42:21,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-27 00:42:21,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:42:21,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-27 00:42:21,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:42:21,236 [ scc.git] DEBUG scripts | 2 +- 2024-06-27 00:42:21,236 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-27 00:42:21,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:42:21,385 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:42:21,463 [ scc.git] DEBUG Submodule path 'scripts': checked out 'c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-27 00:42:21,464 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:42:21,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:42:21,467 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:42:21,940 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff01f2e3160> has no local changes 2024-06-27 00:42:21,941 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:42:22,055 [ scc.git] DEBUG [detached HEAD 17b23b9] merge master -Dorg -Snone 2024-06-27 00:42:22,055 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-27 00:42:22,055 [ scc.merge] INFO Already up to date. 2024-06-27 00:42:22,056 [ scc.merge] INFO 2024-06-27 00:42:22,056 [ scc.merge] INFO Merged PRs: 2024-06-27 00:42:22,056 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-27 00:42:22,056 [ scc.merge] INFO 2024-06-27 00:42:22,056 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-27 00:42:22,056 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-27 00:42:31,175 [ scc.config] DEBUG Found github.token 2024-06-27 00:42:31,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-27 00:42:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:42:31,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:42:32,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-27 00:42:32,205 [ scc.gh] DEBUG 4172 remaining from 5000 (Reset at 01:06 2024-06-27 00:42:32,206 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:32,210 [ scc.git] DEBUG Check current status 2024-06-27 00:42:32,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:32,214 [ scc.git] DEBUG 17b23b9 merge master -Dorg -Snone 2024-06-27 00:42:32,214 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:32,313 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-27 00:42:32,318 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-27 00:42:32,322 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-27 00:42:32,325 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-27 00:42:32,330 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-27 00:42:32,333 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-27 00:42:32,335 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-27 00:42:32,338 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-27 00:42:32,341 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-27 00:42:32,344 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-27 00:42:32,347 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-27 00:42:32,349 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-27 00:42:32,352 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-27 00:42:32,355 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-27 00:42:32,358 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-27 00:42:32,361 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-27 00:42:32,363 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-27 00:42:32,366 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-27 00:42:32,368 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-27 00:42:32,370 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-27 00:42:32,373 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-27 00:42:32,376 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-27 00:42:32,381 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:32,381 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-27 00:42:32,383 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-27 00:42:32,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-27 00:42:33,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:33,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:33,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:34,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:34,383 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:34,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-27 00:42:34,451 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:34,455 [ scc.git] DEBUG Check current status 2024-06-27 00:42:34,455 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:34,458 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-27 00:42:34,459 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:34,500 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-27 00:42:35,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:35,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:36,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:36,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:36,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:36,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:36,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-27 00:42:36,655 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:36,658 [ scc.git] DEBUG Check current status 2024-06-27 00:42:36,659 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:36,662 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-27 00:42:36,662 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:36,701 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:37,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-27 00:42:37,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:37,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:38,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:38,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:38,776 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:38,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:38,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-27 00:42:38,817 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:38,820 [ scc.git] DEBUG Check current status 2024-06-27 00:42:38,820 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:38,823 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-27 00:42:38,824 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:38,867 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:39,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-27 00:42:39,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:40,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:40,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:40,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:40,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:40,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:40,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-27 00:42:40,966 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:40,970 [ scc.git] DEBUG Check current status 2024-06-27 00:42:40,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:40,974 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-27 00:42:40,975 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:41,022 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:41,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-27 00:42:41,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:42,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:42,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:43,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:43,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:43,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:43,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-27 00:42:43,096 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:43,099 [ scc.git] DEBUG Check current status 2024-06-27 00:42:43,099 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:43,103 [ scc.git] DEBUG 9ffbc8b7 Merge pull request #570 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-27 00:42:43,104 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:43,145 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:43,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-27 00:42:43,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:44,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:44,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:45,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:45,221 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:45,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:45,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-27 00:42:45,260 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:45,264 [ scc.git] DEBUG Check current status 2024-06-27 00:42:45,264 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:45,267 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-27 00:42:45,268 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:45,309 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:45,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-27 00:42:46,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:46,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:46,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:47,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:47,407 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:47,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:47,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-27 00:42:47,446 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:47,451 [ scc.git] DEBUG Check current status 2024-06-27 00:42:47,451 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:47,455 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-27 00:42:47,455 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:47,504 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:47,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-27 00:42:48,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:48,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:49,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:49,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:49,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:49,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:49,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-27 00:42:49,600 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:49,604 [ scc.git] DEBUG Check current status 2024-06-27 00:42:49,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:49,609 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-06-27 00:42:49,609 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:49,650 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:50,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-27 00:42:50,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:50,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:51,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:51,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:51,762 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:51,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:51,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-27 00:42:51,802 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:51,806 [ scc.git] DEBUG Check current status 2024-06-27 00:42:51,806 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:51,810 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-27 00:42:51,811 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:51,849 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:52,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-27 00:42:52,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:53,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:53,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:53,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:53,939 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:53,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:53,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-27 00:42:53,979 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:53,983 [ scc.git] DEBUG Check current status 2024-06-27 00:42:53,983 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:53,987 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-27 00:42:53,988 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:54,029 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:54,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-27 00:42:54,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:55,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:55,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:56,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:56,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:56,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:56,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-27 00:42:56,178 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:56,182 [ scc.git] DEBUG Check current status 2024-06-27 00:42:56,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:56,186 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-27 00:42:56,186 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:56,233 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:56,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-27 00:42:57,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:42:57,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:42:58,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:42:58,342 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:42:58,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:42:58,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-27 00:42:58,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:42:58,414 [ scc.git] DEBUG Check current status 2024-06-27 00:42:58,415 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:42:58,419 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-27 00:42:58,419 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:42:58,464 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:42:58,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-27 00:42:59,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:42:59,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:00,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:00,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:00,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:00,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:00,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-27 00:43:00,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:00,581 [ scc.git] DEBUG Check current status 2024-06-27 00:43:00,581 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:00,585 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-27 00:43:00,585 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:00,624 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:01,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-27 00:43:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:01,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:02,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:02,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:02,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:02,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:02,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-27 00:43:02,772 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:02,777 [ scc.git] DEBUG Check current status 2024-06-27 00:43:02,777 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:02,781 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-27 00:43:02,781 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:02,822 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:03,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-27 00:43:03,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:04,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:04,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:04,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:04,948 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:04,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:04,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-27 00:43:04,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:04,999 [ scc.git] DEBUG Check current status 2024-06-27 00:43:04,999 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:05,006 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-27 00:43:05,006 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:05,052 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:05,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-27 00:43:05,380 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-27 00:43:05,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-27 00:43:06,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:06,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:06,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:07,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:07,308 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:07,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:07,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-27 00:43:07,351 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:07,356 [ scc.git] DEBUG Check current status 2024-06-27 00:43:07,357 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:07,362 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-27 00:43:07,363 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:07,407 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:07,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-27 00:43:08,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:08,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:09,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:09,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:09,581 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:09,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:09,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-27 00:43:09,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:09,624 [ scc.git] DEBUG Check current status 2024-06-27 00:43:09,624 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:09,628 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-27 00:43:09,629 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:09,670 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:10,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-27 00:43:10,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:10,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:11,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:11,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:11,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:11,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:11,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-27 00:43:11,814 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:11,819 [ scc.git] DEBUG Check current status 2024-06-27 00:43:11,819 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:11,823 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-27 00:43:11,823 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:11,868 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:11,869 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-27 00:43:12,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-27 00:43:12,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:13,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:13,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:13,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:13,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:13,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:13,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-27 00:43:13,995 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:14,001 [ scc.git] DEBUG Check current status 2024-06-27 00:43:14,001 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:14,006 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-27 00:43:14,006 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:14,049 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:14,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-27 00:43:14,382 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-27 00:43:14,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-27 00:43:15,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:15,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:15,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:16,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:16,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:16,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:16,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-27 00:43:16,364 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:16,369 [ scc.git] DEBUG Check current status 2024-06-27 00:43:16,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:16,374 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-27 00:43:16,374 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:16,415 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:16,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-27 00:43:16,731 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-27 00:43:16,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-27 00:43:17,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:17,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:18,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:18,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:18,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:18,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:18,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-27 00:43:18,695 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:18,700 [ scc.git] DEBUG Check current status 2024-06-27 00:43:18,700 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:18,705 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-27 00:43:18,705 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:18,749 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:19,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-27 00:43:19,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:20,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:20,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:20,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:20,855 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:20,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:20,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-27 00:43:20,896 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-27 00:43:20,901 [ scc.git] DEBUG Check current status 2024-06-27 00:43:20,901 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:20,906 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-27 00:43:20,906 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:20,947 [ scc.config] DEBUG Found remote.origin.url 2024-06-27 00:43:20,947 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-27 00:43:21,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-27 00:43:21,279 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-27 00:43:21,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-27 00:43:21,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-27 00:43:22,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-27 00:43:22,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:23,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-27 00:43:23,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:23,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:23,226 [ scc.git] DEBUG Resetting... 2024-06-27 00:43:23,226 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-27 00:43:23,237 [ scc.git] DEBUG HEAD is now at 17b23b9 merge master -Dorg -Snone 2024-06-27 00:43:23,238 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-27 00:43:23,334 [ scc.git] DEBUG Check current status 2024-06-27 00:43:23,335 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-27 00:43:23,341 [ scc.git] DEBUG 17b23b9 merge master -Dorg -Snone 2024-06-27 00:43:23,341 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-27 00:43:23,388 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-27 00:43:23,390 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-27 00:43:23,393 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-27 00:43:23,395 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-27 00:43:23,399 [ scc.git] DEBUG 9ffbc8b7af1f8539c21b5ef24cfc71166e16dfc3 omero-figure (v7.0.0-3-g9ffbc8b7) 2024-06-27 00:43:23,401 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-27 00:43:23,404 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-27 00:43:23,407 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-06-27 00:43:23,410 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-27 00:43:23,413 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-27 00:43:23,416 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-27 00:43:23,418 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-27 00:43:23,421 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-27 00:43:23,424 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-27 00:43:23,427 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-27 00:43:23,429 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-27 00:43:23,432 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-27 00:43:23,434 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-27 00:43:23,436 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-27 00:43:23,439 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-27 00:43:23,442 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-27 00:43:23,445 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-06-27 00:43:23,446 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-27 00:43:23,446 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-27 00:43:23,446 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-27 00:43:23,446 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-27 00:43:23,446 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-27 00:43:23,447 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-27 00:43:23,447 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:43:23,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-27 00:43:24,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/378 HTTP/1.1" 200 None 2024-06-27 00:43:24,155 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:43:24,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-27 00:43:25,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:25,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/037763f1d0b88b101a1a9631a7570806073a41be HTTP/1.1" 200 None 2024-06-27 00:43:26,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/037763f1d0b88b101a1a9631a7570806073a41be?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:26,096 [ scc.repo] DEBUG - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-27 00:43:26,096 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:43:26,096 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:26,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:26,102 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:43:26,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:43:26,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:43:26,115 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:43:26,122 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:26,122 [ scc.git] DEBUG Calling 'git fetch origin pull/378/head' 2024-06-27 00:43:26,521 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-27 00:43:26,521 [ scc.git] DEBUG * branch refs/pull/378/head -> FETCH_HEAD 2024-06-27 00:43:26,526 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:43:26,526 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:26,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:26,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-27 00:43:26,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:26,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 378 (Bump scripts from `5a90893` to `c20d273`) 037763f1d0b88b101a1a9631a7570806073a41be' 2024-06-27 00:43:26,553 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:26,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:43:26,709 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:43:26,765 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:26,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:26,772 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:43:27,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-27 00:43:27,133 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:43:27,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-27 00:43:27,134 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:27,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:27,141 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:43:27,148 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:43:27,149 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:43:27,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:43:27,166 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:27,166 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:43:27,166 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:27,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:27,174 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:43:27,220 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:27,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:27,227 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:27,272 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:43:27,281 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f1233eca0> has no local changes 2024-06-27 00:43:27,281 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:43:27,292 [ scc.git] DEBUG [detached HEAD 7864899] merge master -Dorg -Ssuccess-only 2024-06-27 00:43:27,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:27,293 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:43:27,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-27 00:43:28,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-27 00:43:28,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-27 00:43:29,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-27 00:43:29,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:30,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:43:30,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-27 00:43:31,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:31,075 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-27 00:43:31,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-27 00:43:32,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-27 00:43:32,016 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:43:32,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-27 00:43:32,016 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:32,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:32,023 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:43:32,030 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:43:32,030 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:43:32,037 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:43:32,045 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:32,046 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-27 00:43:32,493 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-27 00:43:32,494 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-27 00:43:32,500 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:43:32,501 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:32,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:32,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-27 00:43:32,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:32,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-27 00:43:32,530 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:43:32,533 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-27 00:43:32,533 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-27 00:43:32,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:43:32,685 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:43:32,731 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:32,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:32,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:32,789 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:43:32,804 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f112e46a0> has no local changes 2024-06-27 00:43:32,804 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:43:32,827 [ scc.git] DEBUG [detached HEAD c89f6f1] merge master -Dorg -Ssuccess-only 2024-06-27 00:43:32,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:32,829 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:43:33,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-27 00:43:33,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-27 00:43:34,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-27 00:43:34,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-27 00:43:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:35,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-27 00:43:36,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:36,124 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-27 00:43:36,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-27 00:43:37,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-27 00:43:37,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:38,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-27 00:43:38,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:38,427 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-27 00:43:38,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-27 00:43:39,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-27 00:43:39,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-27 00:43:40,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-27 00:43:40,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-27 00:43:41,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:41,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-27 00:43:42,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:42,222 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-27 00:43:42,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-27 00:43:43,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-27 00:43:43,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-27 00:43:44,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-27 00:43:44,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-27 00:43:44,521 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:43:44,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-27 00:43:44,523 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:44,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:44,570 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:43:44,581 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:43:44,581 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:43:44,590 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:43:44,600 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:44,600 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-27 00:43:45,028 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-27 00:43:45,028 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-27 00:43:45,033 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-27 00:43:45,425 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-27 00:43:45,426 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-27 00:43:45,430 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-27 00:43:45,850 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-27 00:43:45,850 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-27 00:43:45,856 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:43:45,856 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:45,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:45,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-27 00:43:45,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:45,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-27 00:43:45,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:43:45,941 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-27 00:43:45,943 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-27 00:43:46,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:43:46,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-27 00:43:46,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:46,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-27 00:43:46,185 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-27 00:43:46,186 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:43:46,189 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-27 00:43:46,189 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-27 00:43:46,189 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-27 00:43:46,189 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-27 00:43:46,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:43:46,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-27 00:43:46,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:46,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-27 00:43:46,566 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-27 00:43:46,567 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-27 00:43:46,567 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:43:46,571 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-27 00:43:46,571 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-27 00:43:46,571 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-27 00:43:46,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:43:46,943 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:43:46,985 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:46,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:46,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:43:47,032 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:43:47,039 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f123aa460> has no local changes 2024-06-27 00:43:47,039 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:43:47,048 [ scc.git] DEBUG [detached HEAD 9cc4559] merge master -Dorg -Ssuccess-only 2024-06-27 00:43:47,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:43:47,049 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:43:47,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-27 00:43:47,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-27 00:43:48,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-27 00:43:48,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-27 00:43:49,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-27 00:43:49,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:50,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:43:50,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-27 00:43:51,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:51,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-27 00:43:52,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-27 00:43:52,264 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-27 00:43:52,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-27 00:43:53,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-27 00:43:53,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-27 00:43:54,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-27 00:43:54,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:55,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-27 00:43:55,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:55,674 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-27 00:43:56,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-27 00:43:56,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-27 00:43:57,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-27 00:43:57,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-27 00:43:58,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:43:58,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-27 00:43:58,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:43:59,000 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-27 00:43:59,002 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:43:59,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-27 00:43:59,003 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:43:59,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:43:59,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:43:59,021 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:43:59,022 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:43:59,028 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:43:59,035 [ scc.git] DEBUG Already up to date. 2024-06-27 00:43:59,035 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-27 00:43:59,431 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-27 00:43:59,432 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-27 00:43:59,440 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-27 00:43:59,852 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-27 00:43:59,852 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-27 00:43:59,861 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-27 00:44:00,252 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-27 00:44:00,252 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-27 00:44:00,259 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:00,259 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:00,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:00,266 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-27 00:44:00,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:00,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-27 00:44:00,373 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-27 00:44:00,373 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-27 00:44:00,373 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-27 00:44:00,373 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:44:00,373 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:44:00,380 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-27 00:44:00,388 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-27 00:44:00,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:00,544 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-27 00:44:00,552 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-27 00:44:00,558 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-27 00:44:00,565 [ scc.config] DEBUG Found github.token 2024-06-27 00:44:00,565 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-27 00:44:00,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-27 00:44:00,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:00,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-27 00:44:00,610 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-27 00:44:00,611 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-27 00:44:00,611 [ scc.git] DEBUG Auto-merging setup.py 2024-06-27 00:44:00,611 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-27 00:44:00,611 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-27 00:44:00,611 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-27 00:44:00,611 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-27 00:44:00,611 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:44:00,611 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:44:00,617 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-27 00:44:00,625 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-27 00:44:00,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:00,949 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-27 00:44:00,956 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-27 00:44:00,964 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-27 00:44:00,971 [ scc.config] DEBUG Found github.token 2024-06-27 00:44:00,971 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-27 00:44:00,971 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-27 00:44:00,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:00,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-27 00:44:01,001 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-27 00:44:01,001 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-27 00:44:01,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:01,006 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-27 00:44:01,006 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-27 00:44:01,006 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-27 00:44:01,007 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-27 00:44:01,007 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-27 00:44:01,007 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-27 00:44:01,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:01,569 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:01,621 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:01,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:01,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:01,672 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:01,678 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f112e48e0> has no local changes 2024-06-27 00:44:01,679 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:01,693 [ scc.git] DEBUG [detached HEAD 7971ec4] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:01,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:01,694 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:02,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-27 00:44:02,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-06-27 00:44:03,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-06-27 00:44:03,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-27 00:44:04,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:04,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:05,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-06-27 00:44:05,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:05,426 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-27 00:44:05,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-27 00:44:06,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-27 00:44:06,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-27 00:44:07,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:07,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:08,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-27 00:44:08,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:08,823 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-27 00:44:09,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-27 00:44:09,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-27 00:44:10,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:10,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:11,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-27 00:44:11,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:11,695 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-27 00:44:11,695 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:11,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-27 00:44:11,696 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:11,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:11,703 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:11,709 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:11,709 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:11,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:11,722 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:11,722 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-27 00:44:12,997 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-27 00:44:12,997 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-27 00:44:13,004 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-27 00:44:13,577 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-27 00:44:13,578 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-27 00:44:13,584 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-06-27 00:44:13,977 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-27 00:44:13,977 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-06-27 00:44:13,982 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:13,982 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:13,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:13,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-27 00:44:13,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:14,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-27 00:44:14,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-27 00:44:14,153 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-27 00:44:14,155 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-27 00:44:14,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:14,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-27 00:44:14,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:14,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-27 00:44:14,367 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-27 00:44:14,367 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-27 00:44:14,368 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-27 00:44:14,368 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:14,374 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-27 00:44:14,374 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-27 00:44:14,374 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-27 00:44:14,374 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-27 00:44:14,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:14,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-27 00:44:14,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:14,739 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-06-27 00:44:14,759 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:14,762 [ scc.git] DEBUG setup.py | 2 +- 2024-06-27 00:44:14,762 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-27 00:44:15,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:15,133 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:15,172 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:15,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:15,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:15,215 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:15,224 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f1129fb50> has no local changes 2024-06-27 00:44:15,224 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:15,235 [ scc.git] DEBUG [detached HEAD 32b8a31e] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:15,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:15,235 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:15,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-27 00:44:16,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-27 00:44:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-27 00:44:17,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-27 00:44:17,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:18,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-27 00:44:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:18,447 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-27 00:44:18,447 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:18,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-27 00:44:18,447 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:18,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:18,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:18,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:18,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:18,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:18,472 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:18,473 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-27 00:44:18,870 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-27 00:44:18,871 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-27 00:44:18,877 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:18,878 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:18,878 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:18,886 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-27 00:44:18,893 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:18,900 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-27 00:44:18,924 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-27 00:44:18,925 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:18,928 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-27 00:44:18,928 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-27 00:44:19,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:19,092 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:19,133 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:19,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:19,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:19,180 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:19,187 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f1024c1c0> has no local changes 2024-06-27 00:44:19,187 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:19,196 [ scc.git] DEBUG [detached HEAD 5868f0a] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:19,197 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:19,197 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:19,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-27 00:44:20,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-27 00:44:20,023 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:44:20,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-27 00:44:21,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:21,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:22,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-27 00:44:22,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:22,473 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-27 00:44:22,473 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:22,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-27 00:44:22,474 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:22,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:22,481 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:22,486 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:22,486 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:22,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:22,496 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:22,497 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-27 00:44:22,860 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-27 00:44:22,861 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-27 00:44:22,865 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:22,865 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:22,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:22,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-27 00:44:22,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:22,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-27 00:44:22,902 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:22,909 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-27 00:44:22,909 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-27 00:44:23,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:23,070 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:23,130 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:23,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:23,141 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:23,192 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:23,203 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f112f9fa0> has no local changes 2024-06-27 00:44:23,203 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:23,214 [ scc.git] DEBUG [detached HEAD e7d271f] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:23,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:23,215 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:23,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-27 00:44:24,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-06-27 00:44:24,087 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:44:24,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-27 00:44:25,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:25,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:26,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-06-27 00:44:26,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:26,769 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-27 00:44:27,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-06-27 00:44:27,243 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:44:27,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-27 00:44:28,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:28,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:29,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-06-27 00:44:29,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:29,672 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-27 00:44:30,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-27 00:44:30,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-27 00:44:31,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-27 00:44:31,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:32,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:32,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-27 00:44:32,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:32,929 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-27 00:44:33,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-27 00:44:33,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-27 00:44:34,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-27 00:44:34,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:35,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:35,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-27 00:44:36,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:36,316 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-27 00:44:36,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-27 00:44:37,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-27 00:44:37,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-27 00:44:38,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:38,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-27 00:44:39,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:39,059 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-27 00:44:39,059 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:39,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-27 00:44:39,060 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:39,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:39,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:39,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:39,074 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:39,154 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:39,161 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:39,161 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-27 00:44:39,733 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-27 00:44:39,734 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-27 00:44:39,740 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-27 00:44:40,996 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-27 00:44:40,997 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-27 00:44:41,003 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-27 00:44:41,416 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-27 00:44:41,416 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-27 00:44:41,423 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-06-27 00:44:41,781 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-27 00:44:41,781 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-06-27 00:44:41,789 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-06-27 00:44:42,150 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-27 00:44:42,150 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-06-27 00:44:42,160 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:42,160 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:42,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:42,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-27 00:44:42,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:42,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-27 00:44:42,218 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-27 00:44:42,219 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:42,223 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-27 00:44:42,223 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-27 00:44:42,223 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-27 00:44:42,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:42,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-27 00:44:42,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:42,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-27 00:44:42,467 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-27 00:44:42,467 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-27 00:44:42,467 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-27 00:44:42,467 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-27 00:44:42,468 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:42,472 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-27 00:44:42,472 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-27 00:44:42,472 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-27 00:44:42,472 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-27 00:44:42,472 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-27 00:44:42,472 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-27 00:44:42,472 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-27 00:44:42,472 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-27 00:44:42,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:42,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-27 00:44:42,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:42,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-27 00:44:42,850 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-27 00:44:42,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:42,855 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-27 00:44:42,856 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-27 00:44:42,856 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-27 00:44:43,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:43,202 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-27 00:44:43,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:43,233 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-06-27 00:44:43,255 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:43,268 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-06-27 00:44:43,268 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-06-27 00:44:43,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:43,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-27 00:44:43,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:43,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-06-27 00:44:43,730 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-27 00:44:43,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:44,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:44,027 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:44,069 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:44,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:44,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:44,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:44,129 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10257340> has no local changes 2024-06-27 00:44:44,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:44,141 [ scc.git] DEBUG [detached HEAD afe5f06] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:44,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:44,141 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:44,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-27 00:44:44,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-27 00:44:45,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-27 00:44:46,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-27 00:44:46,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:46,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:47,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-27 00:44:47,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:47,838 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-27 00:44:47,839 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:47,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-27 00:44:47,839 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:47,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:47,846 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:47,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:47,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:47,860 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:47,868 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:47,868 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-27 00:44:48,250 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-27 00:44:48,250 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-27 00:44:48,256 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:48,256 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:48,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:48,263 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-27 00:44:48,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:48,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-27 00:44:48,289 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:44:48,292 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-27 00:44:48,293 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-27 00:44:48,293 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-27 00:44:48,293 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-27 00:44:48,293 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-27 00:44:48,293 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-27 00:44:48,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:48,464 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:48,508 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:48,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:48,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:48,574 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:48,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f1026ab80> has no local changes 2024-06-27 00:44:48,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:48,593 [ scc.git] DEBUG [detached HEAD 5197975] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:48,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:48,594 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:48,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-27 00:44:49,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-27 00:44:49,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-27 00:44:50,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-27 00:44:50,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:51,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-27 00:44:51,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:51,832 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-27 00:44:52,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-27 00:44:52,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-27 00:44:53,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-27 00:44:53,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:54,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-27 00:44:54,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:44:54,709 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-27 00:44:54,710 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:44:54,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-27 00:44:54,710 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:54,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:54,718 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:44:54,726 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:44:54,727 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:44:54,735 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:44:54,743 [ scc.git] DEBUG Already up to date. 2024-06-27 00:44:54,743 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-27 00:44:55,355 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-27 00:44:55,355 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-27 00:44:55,360 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-27 00:44:56,032 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-27 00:44:56,034 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-27 00:44:56,042 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:44:56,042 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:56,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:56,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-27 00:44:56,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:56,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-27 00:44:56,154 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-27 00:44:56,154 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-27 00:44:56,154 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:44:56,155 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-27 00:44:56,155 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-27 00:44:56,155 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:44:56,163 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-27 00:44:56,195 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-27 00:44:56,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:56,372 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-27 00:44:56,390 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-27 00:44:56,403 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-27 00:44:56,410 [ scc.config] DEBUG Found github.token 2024-06-27 00:44:56,411 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-27 00:44:56,411 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-27 00:44:56,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:56,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-27 00:44:56,447 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-27 00:44:56,448 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-27 00:44:56,448 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-27 00:44:56,448 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:44:56,448 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:44:56,455 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-27 00:44:56,464 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-27 00:44:56,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:44:56,794 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-27 00:44:56,809 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-27 00:44:56,817 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-27 00:44:56,822 [ scc.config] DEBUG Found github.token 2024-06-27 00:44:56,822 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-27 00:44:56,822 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:44:56,865 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:44:56,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:44:56,871 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:44:56,911 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:44:56,920 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f11296f70> has no local changes 2024-06-27 00:44:56,920 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:44:56,931 [ scc.git] DEBUG [detached HEAD 2e9927c] merge master -Dorg -Ssuccess-only 2024-06-27 00:44:56,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:44:56,932 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:44:57,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-27 00:44:57,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-27 00:44:57,848 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:44:58,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-27 00:44:58,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:44:59,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:44:59,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-27 00:45:00,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:00,360 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-27 00:45:00,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-27 00:45:00,827 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:45:01,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-27 00:45:01,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:02,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:45:02,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-27 00:45:03,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:03,273 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-27 00:45:03,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-27 00:45:03,743 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-27 00:45:04,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-27 00:45:04,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:05,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:45:05,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-27 00:45:06,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:06,253 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-27 00:45:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-27 00:45:07,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-27 00:45:07,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-27 00:45:08,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-27 00:45:08,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-27 00:45:09,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-27 00:45:09,140 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:09,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-27 00:45:09,140 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:09,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:09,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:09,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:09,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:09,159 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:09,165 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:09,165 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-27 00:45:09,553 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-27 00:45:09,553 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-27 00:45:09,559 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-27 00:45:09,921 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-27 00:45:09,921 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-27 00:45:09,927 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-27 00:45:10,269 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-27 00:45:10,269 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-27 00:45:10,278 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:10,278 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:10,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:10,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-27 00:45:10,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:10,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-27 00:45:10,332 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:10,350 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-27 00:45:10,352 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-27 00:45:10,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:10,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-27 00:45:10,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:10,528 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-27 00:45:10,565 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-27 00:45:10,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:10,569 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-27 00:45:10,570 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-27 00:45:10,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:10,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-27 00:45:10,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:10,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-27 00:45:10,991 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-27 00:45:10,995 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:11,004 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-27 00:45:11,004 [ scc.git] DEBUG package.json | 2 +- 2024-06-27 00:45:11,004 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-27 00:45:11,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:11,337 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:11,409 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:11,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:11,424 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:11,541 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:11,557 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f112c9e50> has no local changes 2024-06-27 00:45:11,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:11,581 [ scc.git] DEBUG [detached HEAD e13eea7] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:11,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:11,582 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:11,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-27 00:45:12,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-27 00:45:12,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-27 00:45:13,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:13,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-27 00:45:14,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:14,306 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-27 00:45:14,306 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:14,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-27 00:45:14,306 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:14,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:14,313 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:14,320 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:14,320 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:14,327 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:14,335 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:14,335 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-27 00:45:14,708 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-27 00:45:14,708 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-27 00:45:14,717 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:14,717 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:14,717 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:14,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-27 00:45:14,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:14,739 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-27 00:45:14,750 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:14,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:14,915 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:14,999 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:15,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:15,017 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:15,105 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:15,115 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10222fd0> has no local changes 2024-06-27 00:45:15,115 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:15,129 [ scc.git] DEBUG [detached HEAD 5fc833e] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:15,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:15,130 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:15,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-27 00:45:15,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-27 00:45:16,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-27 00:45:16,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-27 00:45:17,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-27 00:45:17,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:18,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-27 00:45:18,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:18,789 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-27 00:45:18,789 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:18,789 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-27 00:45:18,790 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:18,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:18,797 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:18,803 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:18,804 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:18,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:18,819 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:18,819 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-27 00:45:19,392 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-27 00:45:19,392 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-27 00:45:19,397 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:19,397 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:19,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:19,403 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-27 00:45:19,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:19,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-27 00:45:19,429 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-27 00:45:19,430 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:19,433 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-27 00:45:19,433 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-27 00:45:19,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:19,590 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:19,633 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:19,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:19,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:19,686 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:19,693 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f101d9580> has no local changes 2024-06-27 00:45:19,693 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:19,703 [ scc.git] DEBUG [detached HEAD 6be8ad0] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:19,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:19,704 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:20,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-27 00:45:20,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-27 00:45:21,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-27 00:45:21,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-27 00:45:21,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-27 00:45:22,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:22,851 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-27 00:45:22,851 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:22,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-27 00:45:22,852 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:22,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:22,858 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:22,863 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:22,863 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:22,869 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:22,875 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:22,875 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-27 00:45:23,305 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-27 00:45:23,305 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-27 00:45:23,310 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:23,310 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:23,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:23,316 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-27 00:45:23,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:23,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-27 00:45:23,364 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG Auto-merging setup.py 2024-06-27 00:45:23,364 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-27 00:45:23,365 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:45:23,365 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:45:23,372 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-27 00:45:23,380 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-27 00:45:23,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:23,534 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-27 00:45:23,540 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-27 00:45:23,547 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2024-06-27 00:45:23,554 [ scc.config] DEBUG Found github.token 2024-06-27 00:45:23,554 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-27 00:45:23,555 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:23,597 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:23,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:23,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:23,646 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:23,655 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10253e80> has no local changes 2024-06-27 00:45:23,655 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:23,665 [ scc.git] DEBUG [detached HEAD dfe46c0] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:23,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:23,666 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:24,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-27 00:45:24,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-27 00:45:24,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-27 00:45:25,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-27 00:45:25,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:26,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-27 00:45:26,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:26,838 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-27 00:45:26,838 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:26,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-27 00:45:26,839 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:26,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:26,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:26,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:26,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:26,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:26,864 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:26,865 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-27 00:45:27,303 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-27 00:45:27,303 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-27 00:45:27,308 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:27,308 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:27,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:27,314 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-27 00:45:27,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:27,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-27 00:45:27,342 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-27 00:45:27,345 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-27 00:45:27,347 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-27 00:45:27,347 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-27 00:45:27,348 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-27 00:45:27,348 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-27 00:45:27,349 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-27 00:45:27,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:27,511 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:27,551 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:27,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:27,556 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:27,595 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:27,602 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f101d9730> has no local changes 2024-06-27 00:45:27,603 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:27,613 [ scc.git] DEBUG [detached HEAD b59a311] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:27,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:27,613 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:27,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-27 00:45:27,933 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:27,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-27 00:45:27,933 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:27,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:27,939 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:27,944 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:27,944 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:27,950 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:27,956 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:27,956 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:27,956 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:27,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:27,962 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:28,001 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:28,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:28,007 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:28,054 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:28,060 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f101eabe0> has no local changes 2024-06-27 00:45:28,060 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:28,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:28,070 [ scc.git] DEBUG [detached HEAD 8bdb24b] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:28,071 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:28,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-27 00:45:28,378 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:28,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-27 00:45:28,379 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:28,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:28,384 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:28,390 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:28,390 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:28,396 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:28,402 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:28,402 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:28,402 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:28,402 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:28,407 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:28,446 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:28,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:28,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:28,492 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:28,500 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10229370> has no local changes 2024-06-27 00:45:28,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:28,509 [ scc.git] DEBUG [detached HEAD 077b1f8] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:28,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:28,510 [ scc.git] INFO Overriding base-branch from master to main 2024-06-27 00:45:28,510 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:28,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-27 00:45:29,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-27 00:45:29,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-27 00:45:30,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-27 00:45:30,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-27 00:45:31,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:31,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-27 00:45:32,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-27 00:45:32,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:32,706 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-27 00:45:32,706 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:32,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-27 00:45:32,706 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:32,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:32,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-27 00:45:32,720 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:32,720 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-27 00:45:32,726 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-27 00:45:32,732 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:32,732 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-27 00:45:33,145 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-27 00:45:33,145 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-27 00:45:33,150 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:33,150 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:33,150 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-27 00:45:33,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-27 00:45:33,210 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-27 00:45:33,211 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-27 00:45:33,211 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:45:33,211 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:45:33,217 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-27 00:45:33,223 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-27 00:45:33,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:33,374 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-27 00:45:33,381 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-27 00:45:33,387 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-27 00:45:33,393 [ scc.config] DEBUG Found github.token 2024-06-27 00:45:33,394 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-27 00:45:33,394 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:33,442 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:33,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:33,507 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:33,514 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10231f10> has no local changes 2024-06-27 00:45:33,515 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:33,524 [ scc.git] DEBUG [detached HEAD ed2c99f] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:33,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:33,525 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:33,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-27 00:45:33,811 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:33,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-27 00:45:33,811 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:33,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,818 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:33,825 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:33,826 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:33,834 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:33,843 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:33,843 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:33,843 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:33,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,851 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:33,900 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:33,900 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:33,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:33,947 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:33,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f101cbeb0> has no local changes 2024-06-27 00:45:33,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:33,963 [ scc.git] DEBUG [detached HEAD 1f383ab] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:33,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:33,964 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:34,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-27 00:45:34,244 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:34,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-27 00:45:34,244 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:34,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:34,250 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:34,256 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:34,257 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:34,264 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:34,272 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:34,272 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:34,272 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:34,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:34,279 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:34,324 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:34,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:34,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:34,370 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:34,383 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f10156520> has no local changes 2024-06-27 00:45:34,384 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:34,409 [ scc.git] DEBUG [detached HEAD 2849a18] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:34,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:34,410 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:34,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-27 00:45:35,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-27 00:45:35,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-27 00:45:36,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-27 00:45:36,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:37,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-27 00:45:37,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:37,585 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-27 00:45:37,586 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:37,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-27 00:45:37,586 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:37,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:37,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-27 00:45:37,613 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:37,614 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-27 00:45:37,624 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-27 00:45:37,636 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:37,636 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-27 00:45:38,048 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-27 00:45:38,049 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-27 00:45:38,057 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:38,058 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:38,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:38,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-27 00:45:38,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:38,084 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-27 00:45:38,116 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-27 00:45:38,116 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-27 00:45:38,116 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:45:38,117 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:45:38,128 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-27 00:45:38,141 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-27 00:45:38,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:38,302 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-27 00:45:38,311 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-27 00:45:38,319 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-27 00:45:38,326 [ scc.config] DEBUG Found github.token 2024-06-27 00:45:38,326 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-27 00:45:38,327 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:38,381 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:38,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:38,391 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:38,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:38,463 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f1019bbe0> has no local changes 2024-06-27 00:45:38,463 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:38,477 [ scc.git] DEBUG [detached HEAD ad419af] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:38,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:38,478 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-27 00:45:38,478 [ scc.repo] DEBUG ## PRs found: 2024-06-27 00:45:38,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-27 00:45:39,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-27 00:45:39,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-27 00:45:40,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-27 00:45:40,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-27 00:45:41,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-27 00:45:41,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-27 00:45:42,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-27 00:45:42,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-27 00:45:43,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-27 00:45:43,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-27 00:45:43,558 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-27 00:45:44,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-27 00:45:44,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-27 00:45:45,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-27 00:45:45,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-27 00:45:45,511 [ scc.repo] DEBUG ## Branches found: 2024-06-27 00:45:45,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-27 00:45:45,511 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:45,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:45,520 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-27 00:45:45,530 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-27 00:45:45,530 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-27 00:45:45,543 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-27 00:45:45,558 [ scc.git] DEBUG Already up to date. 2024-06-27 00:45:45,560 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-27 00:45:46,025 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-27 00:45:46,025 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-27 00:45:46,031 [ scc.git] DEBUG ## Unique users: [] 2024-06-27 00:45:46,032 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:46,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:46,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-27 00:45:46,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:46,053 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-27 00:45:46,091 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-27 00:45:46,092 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-27 00:45:46,092 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-27 00:45:46,092 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-27 00:45:46,098 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-27 00:45:46,107 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-06-27 00:45:46,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:46,271 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-27 00:45:46,280 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-06-27 00:45:46,288 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#108](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-27 00:45:46,300 [ scc.config] DEBUG Found github.token 2024-06-27 00:45:46,301 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-27 00:45:46,302 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-27 00:45:46,351 [ scc.git] DEBUG Get sha1 of %s 2024-06-27 00:45:46,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-27 00:45:46,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:46,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:46,415 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f101563d0> has no local changes 2024-06-27 00:45:46,415 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:46,426 [ scc.git] DEBUG [detached HEAD e6f3609] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:46,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:46,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-27 00:45:46,512 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-27 00:45:46,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:46,695 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-27 00:45:46,701 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-27 00:45:47,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:47,108 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-27 00:45:47,113 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-27 00:45:47,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:47,511 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-27 00:45:47,517 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-27 00:45:47,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:47,937 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-27 00:45:48,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:48,343 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-27 00:45:48,350 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-27 00:45:48,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:48,754 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-27 00:45:48,761 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-27 00:45:49,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:49,174 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-27 00:45:49,180 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-27 00:45:49,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:49,571 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-27 00:45:49,578 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-27 00:45:49,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:49,984 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-27 00:45:49,990 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-27 00:45:50,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:50,388 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-27 00:45:50,393 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-27 00:45:50,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:50,798 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-27 00:45:50,804 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-27 00:45:51,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:51,234 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-27 00:45:51,241 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-27 00:45:51,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:51,674 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-27 00:45:52,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:52,090 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-27 00:45:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:52,486 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-27 00:45:52,495 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-27 00:45:52,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:52,907 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-27 00:45:53,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:53,322 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-27 00:45:53,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:53,723 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-27 00:45:53,730 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-27 00:45:54,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:54,132 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-27 00:45:54,138 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-27 00:45:54,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:54,543 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-27 00:45:54,548 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-27 00:45:54,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:54,950 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-27 00:45:54,957 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-27 00:45:55,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-27 00:45:55,367 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-27 00:45:55,367 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-27 00:45:55,463 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1f125f9160> has local changes 2024-06-27 00:45:55,464 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#108 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/108/)' 2024-06-27 00:45:55,481 [ scc.git] DEBUG [detached HEAD fce77ff] merge master -Dorg -Ssuccess-only 2024-06-27 00:45:55,482 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-27 00:45:55,482 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-27 00:45:55,482 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,482 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 378 dependabot[bot] 'Bump scripts from `5a90893` to `c20d273`' 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-27 00:45:55,483 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-27 00:45:55,483 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-27 00:45:55,483 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-27 00:45:55,483 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-27 00:45:55,483 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-27 00:45:55,483 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,483 [ scc.merge] INFO 2024-06-27 00:45:55,483 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-27 00:45:55,484 [ scc.merge] INFO 2024-06-27 00:45:55,484 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-27 00:45:55,484 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-27 00:45:55,484 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,484 [ scc.merge] INFO 2024-06-27 00:45:55,484 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-27 00:45:55,484 [ scc.merge] INFO 2024-06-27 00:45:55,484 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-27 00:45:55,484 [ scc.merge] INFO 2024-06-27 00:45:55,484 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-27 00:45:55,484 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-27 00:45:55,484 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-27 00:45:55,484 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,484 [ scc.merge] INFO 2024-06-27 00:45:55,484 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-27 00:45:55,485 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-27 00:45:55,485 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-27 00:45:55,485 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-27 00:45:55,485 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,485 [ scc.merge] INFO 2024-06-27 00:45:55,485 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-27 00:45:55,485 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-06-27 00:45:55,486 [ scc.merge] INFO 2024-06-27 00:45:55,486 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-27 00:45:55,486 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-27 00:45:55,486 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,486 [ scc.merge] INFO 2024-06-27 00:45:55,486 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-27 00:45:55,486 [ scc.merge] INFO 2024-06-27 00:45:55,486 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-27 00:45:55,486 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,486 [ scc.merge] INFO 2024-06-27 00:45:55,486 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-27 00:45:55,486 [ scc.merge] INFO 2024-06-27 00:45:55,486 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-27 00:45:55,486 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-27 00:45:55,486 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-27 00:45:55,486 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-27 00:45:55,487 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-27 00:45:55,487 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-27 00:45:55,487 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-27 00:45:55,487 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,487 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,487 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-27 00:45:55,487 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-27 00:45:55,488 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Merged PRs: 2024-06-27 00:45:55,488 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-27 00:45:55,488 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-27 00:45:55,488 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-27 00:45:55,488 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,488 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-27 00:45:55,488 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,488 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,488 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-27 00:45:55,488 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,488 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-27 00:45:55,489 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-27 00:45:55,489 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO Repository: ome/scripts 2024-06-27 00:45:55,489 [ scc.merge] INFO Excluded PRs: 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-27 00:45:55,489 [ scc.merge] INFO Already up to date. 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-27 00:45:55,489 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-27 00:45:55,489 [ scc.merge] INFO 2024-06-27 00:45:55,489 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-27 00:45:55,490 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-27 00:45:55,497 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-27 00:45:55,504 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-27 00:45:55,511 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-27 00:45:55,518 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-27 00:45:55,524 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-27 00:45:55,531 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-27 00:45:55,539 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-27 00:45:55,547 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-27 00:45:55,555 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-27 00:45:55,561 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-27 00:45:55,568 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-27 00:45:55,574 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-27 00:45:55,581 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-27 00:45:55,588 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-27 00:45:55,594 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-27 00:45:55,601 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-27 00:45:55,610 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-27 00:45:55,618 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-27 00:45:55,625 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-27 00:45:55,632 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-27 00:45:55,639 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-27 00:45:55,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-27 00:45:55,648 [ scc.git] DEBUG Calling 'git remote' 2024-06-27 00:45:55,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 3970839] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9ffbc8b7 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD 138d614] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-27 00:46:42,453 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-27 00:46:51,374 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-27 00:46:53,720 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-27 00:46:58,247 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-27 00:47:46,049 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS