![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 3ae760e47042efe970407286ec1c6f5fd98f0bc3 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10 Commit message: "Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608" > git rev-list --no-walk 3ae760e47042efe970407286ec1c6f5fd98f0bc3 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 116 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-11 08:01:14,281 [ scc.config] DEBUG Found github.token 2024-07-11 08:01:14,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-11 08:01:14,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:01:14,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:01:15,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-11 08:01:15,307 [ scc.gh] DEBUG 4986 remaining from 5000 (Reset at 08:07 2024-07-11 08:01:15,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:15,312 [ scc.git] DEBUG Check current status 2024-07-11 08:01:15,312 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:15,315 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-11 08:01:15,315 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:15,358 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-11 08:01:15,360 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-11 08:01:15,363 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-11 08:01:15,366 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-11 08:01:16,399 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-11 08:01:16,402 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-11 08:01:16,404 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-11 08:01:16,442 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-11 08:01:16,445 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-11 08:01:16,447 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-11 08:01:16,450 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-11 08:01:16,452 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-11 08:01:16,455 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-11 08:01:16,458 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-11 08:01:16,475 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-11 08:01:16,477 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-11 08:01:16,480 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-11 08:01:16,482 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-11 08:01:16,485 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-11 08:01:16,487 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-11 08:01:16,490 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-11 08:01:16,493 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-11 08:01:16,497 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:16,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-11 08:01:17,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:17,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:18,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:18,447 [ scc.git] DEBUG Resetting... 2024-07-11 08:01:18,447 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-11 08:01:18,456 [ scc.git] DEBUG HEAD is now at 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-11 08:01:18,456 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-11 08:01:18,548 [ scc.git] DEBUG Check current status 2024-07-11 08:01:18,549 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:18,552 [ scc.git] DEBUG 3ae760e Merge pull request #380 from ome/dependabot/submodules/omero-figure-6456608 2024-07-11 08:01:18,552 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:18,593 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-11 08:01:18,596 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-11 08:01:18,598 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-11 08:01:18,601 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-11 08:01:18,608 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-11 08:01:18,611 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-11 08:01:18,613 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-11 08:01:18,616 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-11 08:01:18,619 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-11 08:01:18,622 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-11 08:01:18,624 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-11 08:01:18,627 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-11 08:01:18,630 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-11 08:01:18,632 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-11 08:01:18,635 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-11 08:01:18,638 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-11 08:01:18,640 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-11 08:01:18,642 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-11 08:01:18,645 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-11 08:01:18,647 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-11 08:01:18,650 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-11 08:01:18,653 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-11 08:01:18,654 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-11 08:01:18,654 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-11 08:01:18,654 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-11 08:01:18,654 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-11 08:01:18,654 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-11 08:01:18,654 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:01:18,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-11 08:01:18,884 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:01:18,884 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:01:18,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:01:18,888 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:01:18,891 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:01:18,891 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:01:18,894 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:01:18,898 [ scc.git] DEBUG Already up to date. 2024-07-11 08:01:18,898 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:01:18,898 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:01:18,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:01:18,901 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:01:18,948 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:01:18,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:01:18,951 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:01:20,369 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9820cb4d60> has no local changes 2024-07-11 08:01:20,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:01:20,437 [ scc.git] DEBUG [detached HEAD 3582fa4] merge master -Dorg -Snone 2024-07-11 08:01:20,437 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-11 08:01:20,437 [ scc.merge] INFO Already up to date. 2024-07-11 08:01:20,438 [ scc.merge] INFO 2024-07-11 08:01:20,438 [ scc.merge] INFO 2024-07-11 08:01:20,438 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-11 08:01:20,438 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-07-11 08:01:29,385 [ scc.config] DEBUG Found github.token 2024-07-11 08:01:29,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-11 08:01:29,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:01:29,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:01:30,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-11 08:01:30,410 [ scc.gh] DEBUG 4978 remaining from 5000 (Reset at 08:07 2024-07-11 08:01:30,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:30,413 [ scc.git] DEBUG Check current status 2024-07-11 08:01:30,414 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:30,417 [ scc.git] DEBUG 3582fa4 merge master -Dorg -Snone 2024-07-11 08:01:30,417 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:30,459 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-11 08:01:30,461 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-11 08:01:30,464 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-11 08:01:30,467 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-11 08:01:30,474 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-11 08:01:30,476 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-11 08:01:30,479 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-11 08:01:30,482 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-11 08:01:30,485 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-11 08:01:30,487 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-11 08:01:30,490 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-11 08:01:30,492 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-11 08:01:30,495 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-11 08:01:30,498 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-11 08:01:30,501 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-11 08:01:30,503 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-11 08:01:30,506 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-11 08:01:30,508 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-11 08:01:30,510 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-11 08:01:30,513 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-11 08:01:30,515 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-11 08:01:30,519 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-11 08:01:30,522 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:30,522 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-11 08:01:30,524 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-07-11 08:01:30,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-11 08:01:31,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:31,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:32,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:32,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:32,661 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:32,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-11 08:01:32,727 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:32,730 [ scc.git] DEBUG Check current status 2024-07-11 08:01:32,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:32,733 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-07-11 08:01:32,733 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:32,770 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:33,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-07-11 08:01:33,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:34,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:34,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:34,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:34,877 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:34,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:34,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-11 08:01:34,916 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:34,919 [ scc.git] DEBUG Check current status 2024-07-11 08:01:34,919 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:34,923 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-07-11 08:01:34,923 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:34,960 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:35,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-07-11 08:01:35,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:36,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:36,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:37,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:37,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:37,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:37,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-11 08:01:37,148 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:37,151 [ scc.git] DEBUG Check current status 2024-07-11 08:01:37,151 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:37,155 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-07-11 08:01:37,155 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:37,194 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:37,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-07-11 08:01:38,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:38,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:38,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:39,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:39,325 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:39,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:39,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-11 08:01:39,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:39,365 [ scc.git] DEBUG Check current status 2024-07-11 08:01:39,365 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:39,368 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-11 08:01:39,368 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:39,405 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:39,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-07-11 08:01:40,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:40,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:41,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:41,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:41,539 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:41,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:41,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-11 08:01:41,576 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:41,579 [ scc.git] DEBUG Check current status 2024-07-11 08:01:41,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:41,641 [ scc.git] DEBUG 64566080 Merge pull request #574 from Tom-TBT/viterefresh 2024-07-11 08:01:41,641 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:41,678 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:42,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-07-11 08:01:42,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:42,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:43,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:43,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:43,749 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:43,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:43,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-11 08:01:43,787 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:43,790 [ scc.git] DEBUG Check current status 2024-07-11 08:01:43,790 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:43,794 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-11 08:01:43,794 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:43,831 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:44,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-07-11 08:01:44,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:45,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:45,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:45,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:45,945 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:45,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:45,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-11 08:01:45,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:45,985 [ scc.git] DEBUG Check current status 2024-07-11 08:01:45,985 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:45,989 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-07-11 08:01:45,989 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:46,028 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:46,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-07-11 08:01:46,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:47,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:47,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:48,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:48,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:48,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:48,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-11 08:01:48,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:48,260 [ scc.git] DEBUG Check current status 2024-07-11 08:01:48,260 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:48,264 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-07-11 08:01:48,264 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:48,302 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:48,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-07-11 08:01:49,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:49,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:50,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:50,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:50,441 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:50,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:50,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-11 08:01:50,477 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:50,481 [ scc.git] DEBUG Check current status 2024-07-11 08:01:50,481 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:50,485 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-07-11 08:01:50,485 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:50,522 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:50,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-07-11 08:01:51,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:51,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:52,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:52,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:52,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:52,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:52,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-11 08:01:52,740 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:52,744 [ scc.git] DEBUG Check current status 2024-07-11 08:01:52,744 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:52,748 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-11 08:01:52,748 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:52,785 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:53,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-07-11 08:01:53,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:54,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:54,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:54,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:54,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:54,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:54,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-11 08:01:54,956 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:54,960 [ scc.git] DEBUG Check current status 2024-07-11 08:01:54,960 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:54,964 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-07-11 08:01:54,964 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:55,002 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:55,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-07-11 08:01:55,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:56,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:56,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:57,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:57,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:57,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:57,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-11 08:01:57,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:57,180 [ scc.git] DEBUG Check current status 2024-07-11 08:01:57,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:57,184 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-07-11 08:01:57,184 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:57,222 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:57,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-07-11 08:01:58,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:01:58,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:01:58,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:01:59,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:01:59,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:01:59,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:01:59,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-11 08:01:59,413 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:01:59,416 [ scc.git] DEBUG Check current status 2024-07-11 08:01:59,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:01:59,420 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-07-11 08:01:59,420 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:01:59,458 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:01:59,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-07-11 08:02:00,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:00,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:01,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:01,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:01,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:01,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:01,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-11 08:02:01,642 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:01,645 [ scc.git] DEBUG Check current status 2024-07-11 08:02:01,645 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:01,649 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-11 08:02:01,649 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:01,689 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:02,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-07-11 08:02:02,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:03,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:03,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:03,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:03,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:03,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-11 08:02:03,861 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:03,865 [ scc.git] DEBUG Check current status 2024-07-11 08:02:03,865 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:03,869 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-07-11 08:02:03,869 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:03,909 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:04,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-11 08:02:04,265 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-11 08:02:04,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-07-11 08:02:04,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:05,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:06,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:06,225 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:06,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:06,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-11 08:02:06,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:06,267 [ scc.git] DEBUG Check current status 2024-07-11 08:02:06,267 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:06,271 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-07-11 08:02:06,271 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:06,309 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:06,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-07-11 08:02:07,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:07,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:08,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:08,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:08,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:08,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:08,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-11 08:02:08,517 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:08,521 [ scc.git] DEBUG Check current status 2024-07-11 08:02:08,521 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:08,525 [ scc.git] DEBUG deab817 update setup-python to v4 2024-07-11 08:02:08,525 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:08,564 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:08,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-07-11 08:02:09,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:09,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:10,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:10,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:10,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:10,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:10,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-11 08:02:10,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:10,754 [ scc.git] DEBUG Check current status 2024-07-11 08:02:10,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:10,758 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-11 08:02:10,759 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:10,799 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:10,799 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-07-11 08:02:11,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-07-11 08:02:11,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:12,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:12,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:12,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:12,966 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:13,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:13,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-11 08:02:13,004 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:13,007 [ scc.git] DEBUG Check current status 2024-07-11 08:02:13,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:13,012 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-11 08:02:13,012 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:13,050 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:13,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-11 08:02:13,388 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-11 08:02:13,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-07-11 08:02:14,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:14,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:14,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:15,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:15,342 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:15,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:15,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-11 08:02:15,378 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:15,382 [ scc.git] DEBUG Check current status 2024-07-11 08:02:15,382 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:15,386 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-07-11 08:02:15,387 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:15,426 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:15,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-11 08:02:15,763 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-11 08:02:15,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-07-11 08:02:16,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:16,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:17,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:17,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:17,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:17,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:17,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-11 08:02:17,732 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:17,736 [ scc.git] DEBUG Check current status 2024-07-11 08:02:17,737 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:17,741 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-11 08:02:17,741 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:17,782 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:18,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-07-11 08:02:18,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:19,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:19,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:19,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:19,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:20,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:20,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-11 08:02:20,027 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-11 08:02:20,031 [ scc.git] DEBUG Check current status 2024-07-11 08:02:20,031 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:20,036 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-11 08:02:20,036 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:20,077 [ scc.config] DEBUG Found remote.origin.url 2024-07-11 08:02:20,077 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-11 08:02:20,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-11 08:02:20,400 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-11 08:02:20,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-07-11 08:02:21,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-11 08:02:21,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-11 08:02:21,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-11 08:02:22,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:22,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:22,449 [ scc.git] DEBUG Resetting... 2024-07-11 08:02:22,449 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-11 08:02:22,458 [ scc.git] DEBUG HEAD is now at 3582fa4 merge master -Dorg -Snone 2024-07-11 08:02:22,458 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-11 08:02:22,552 [ scc.git] DEBUG Check current status 2024-07-11 08:02:22,552 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-11 08:02:22,556 [ scc.git] DEBUG 3582fa4 merge master -Dorg -Snone 2024-07-11 08:02:22,556 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-11 08:02:22,599 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-11 08:02:22,602 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-11 08:02:22,604 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-11 08:02:22,607 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-11 08:02:22,615 [ scc.git] DEBUG 64566080f813fb5d70a77c3cd1a141bf30eaddba omero-figure (v7.0.0-7-g64566080) 2024-07-11 08:02:22,617 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-11 08:02:22,620 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-11 08:02:22,623 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-11 08:02:22,626 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-11 08:02:22,628 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-11 08:02:22,631 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-11 08:02:22,633 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-11 08:02:22,636 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-11 08:02:22,639 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-11 08:02:22,642 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-11 08:02:22,644 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-11 08:02:22,647 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-11 08:02:22,649 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-11 08:02:22,652 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-11 08:02:22,654 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-11 08:02:22,657 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-11 08:02:22,660 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-11 08:02:22,661 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-11 08:02:22,661 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-11 08:02:22,661 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-11 08:02:22,661 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-11 08:02:22,661 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-11 08:02:22,661 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-11 08:02:22,661 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:22,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-11 08:02:22,848 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:02:22,848 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:22,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:22,853 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:02:22,857 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:02:22,857 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:02:22,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:02:22,868 [ scc.git] DEBUG Already up to date. 2024-07-11 08:02:22,868 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:02:22,868 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:22,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:22,872 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:02:22,921 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:22,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:22,925 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:23,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-07-11 08:02:23,273 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:02:23,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-11 08:02:23,274 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:23,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:23,278 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:02:23,282 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:02:23,282 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:02:23,287 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:02:23,292 [ scc.git] DEBUG Already up to date. 2024-07-11 08:02:23,292 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:02:23,292 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:23,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:23,296 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:02:23,332 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:23,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:23,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:23,371 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:02:23,376 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fc3ebdf0> has no local changes 2024-07-11 08:02:23,377 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:02:23,384 [ scc.git] DEBUG [detached HEAD e5b2623] merge master -Dorg -Ssuccess-only 2024-07-11 08:02:23,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:23,384 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:23,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-07-11 08:02:24,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-07-11 08:02:24,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-07-11 08:02:25,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-11 08:02:25,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:26,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:02:27,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-11 08:02:27,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:27,425 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-07-11 08:02:27,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-07-11 08:02:28,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-07-11 08:02:28,368 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:02:28,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-11 08:02:28,368 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:28,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:28,373 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:02:28,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:02:28,378 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:02:28,382 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:02:28,387 [ scc.git] DEBUG Already up to date. 2024-07-11 08:02:28,387 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-07-11 08:02:28,797 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-07-11 08:02:28,797 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-07-11 08:02:28,800 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:02:28,800 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:28,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:28,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-11 08:02:28,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:28,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-11 08:02:28,823 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:02:28,825 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-07-11 08:02:28,825 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-07-11 08:02:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:28,995 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:02:29,033 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:29,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:29,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:29,073 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:02:29,078 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fc476700> has no local changes 2024-07-11 08:02:29,078 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:02:29,085 [ scc.git] DEBUG [detached HEAD 4c3628f] merge master -Dorg -Ssuccess-only 2024-07-11 08:02:29,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:29,086 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:29,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-07-11 08:02:30,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-07-11 08:02:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-07-11 08:02:31,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-11 08:02:31,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:31,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-11 08:02:32,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:32,408 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-11 08:02:32,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-07-11 08:02:33,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-11 08:02:33,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:34,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-11 08:02:34,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:34,837 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-07-11 08:02:35,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-07-11 08:02:35,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-07-11 08:02:36,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-07-11 08:02:36,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-07-11 08:02:37,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-11 08:02:37,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:38,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-11 08:02:38,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:38,536 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-07-11 08:02:39,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-07-11 08:02:39,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-07-11 08:02:39,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-07-11 08:02:40,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-07-11 08:02:40,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-07-11 08:02:40,861 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:02:40,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-11 08:02:40,861 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:40,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:40,866 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:02:40,870 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:02:40,870 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:02:40,875 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:02:40,880 [ scc.git] DEBUG Already up to date. 2024-07-11 08:02:40,880 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-07-11 08:02:41,396 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-11 08:02:41,396 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-07-11 08:02:41,400 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-07-11 08:02:41,742 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-11 08:02:41,742 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-07-11 08:02:41,746 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-11 08:02:42,396 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-11 08:02:42,396 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-11 08:02:42,399 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:02:42,400 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:42,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:42,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-11 08:02:42,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:42,413 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-11 08:02:42,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:02:42,534 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-07-11 08:02:42,534 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-07-11 08:02:42,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:42,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-11 08:02:42,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:42,714 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-11 08:02:42,817 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-11 08:02:42,818 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:02:42,821 [ scc.git] DEBUG setup.py | 3 +-- 2024-07-11 08:02:42,821 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-07-11 08:02:42,821 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-07-11 08:02:42,821 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-07-11 08:02:43,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:43,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-11 08:02:43,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:43,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-11 08:02:43,223 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-11 08:02:43,224 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-07-11 08:02:43,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:02:43,227 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-07-11 08:02:43,227 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-07-11 08:02:43,227 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-07-11 08:02:43,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:43,529 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:02:43,565 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:43,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:43,569 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:43,604 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:02:43,610 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fb396c70> has no local changes 2024-07-11 08:02:43,610 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:02:43,618 [ scc.git] DEBUG [detached HEAD b86cb33] merge master -Dorg -Ssuccess-only 2024-07-11 08:02:43,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:43,618 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:44,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-07-11 08:02:44,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-07-11 08:02:45,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-07-11 08:02:45,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-11 08:02:46,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:46,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:02:47,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-11 08:02:47,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:47,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-11 08:02:48,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-07-11 08:02:48,373 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-07-11 08:02:48,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-07-11 08:02:49,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-07-11 08:02:49,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-07-11 08:02:50,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-11 08:02:50,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:51,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-11 08:02:51,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:51,763 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-11 08:02:52,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-07-11 08:02:52,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-07-11 08:02:53,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-07-11 08:02:53,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-11 08:02:54,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:02:54,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-11 08:02:55,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:02:55,074 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-07-11 08:02:55,074 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:02:55,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-11 08:02:55,075 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:55,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:55,081 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:02:55,085 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:02:55,085 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:02:55,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:02:55,095 [ scc.git] DEBUG Already up to date. 2024-07-11 08:02:55,096 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-07-11 08:02:55,629 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-11 08:02:55,629 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-07-11 08:02:55,633 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-07-11 08:02:56,001 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-11 08:02:56,001 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-07-11 08:02:56,006 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-07-11 08:02:56,571 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-11 08:02:56,571 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-07-11 08:02:56,576 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:02:56,576 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:56,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:56,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-11 08:02:56,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:56,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-11 08:02:56,648 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-11 08:02:56,648 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:02:56,648 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-11 08:02:56,648 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-11 08:02:56,648 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:02:56,653 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-11 08:02:56,658 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-11 08:02:56,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:56,822 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-11 08:02:56,828 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-11 08:02:56,833 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-07-11 08:02:56,837 [ scc.config] DEBUG Found github.token 2024-07-11 08:02:56,837 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-07-11 08:02:56,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-11 08:02:56,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:56,847 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-11 08:02:56,870 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-07-11 08:02:56,870 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-07-11 08:02:56,870 [ scc.git] DEBUG Auto-merging setup.py 2024-07-11 08:02:56,870 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-11 08:02:56,870 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-11 08:02:56,871 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-11 08:02:56,871 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-07-11 08:02:56,871 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:02:56,871 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:02:56,875 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-11 08:02:56,881 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-11 08:02:57,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:57,233 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-11 08:02:57,239 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-11 08:02:57,243 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-07-11 08:02:57,248 [ scc.config] DEBUG Found github.token 2024-07-11 08:02:57,248 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-07-11 08:02:57,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-11 08:02:57,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:57,257 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-11 08:02:57,270 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-07-11 08:02:57,270 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-11 08:02:57,270 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:02:57,273 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-07-11 08:02:57,273 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-07-11 08:02:57,273 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-07-11 08:02:57,273 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-07-11 08:02:57,273 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-07-11 08:02:57,273 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-07-11 08:02:57,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:02:57,642 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:02:57,678 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:02:57,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:02:57,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:02:57,718 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:02:57,723 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fb34d460> has no local changes 2024-07-11 08:02:57,723 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:02:57,731 [ scc.git] DEBUG [detached HEAD 0907352] merge master -Dorg -Ssuccess-only 2024-07-11 08:02:57,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:02:57,731 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:02:58,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-07-11 08:02:58,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-07-11 08:02:59,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-07-11 08:02:59,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576 HTTP/1.1" 200 None 2024-07-11 08:03:00,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576/comments HTTP/1.1" 200 None 2024-07-11 08:03:00,013 [ scc.repo] DEBUG # ... Include label: include 2024-07-11 08:03:00,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e HTTP/1.1" 200 None 2024-07-11 08:03:01,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:01,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:02,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f4b9c3912e5f22ce4ca023e06a5863f5c577598e HTTP/1.1" 200 None 2024-07-11 08:03:02,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f4b9c3912e5f22ce4ca023e06a5863f5c577598e?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:02,477 [ scc.repo] DEBUG - PR 576 Rdornier 'Color picker - popup update' 2024-07-11 08:03:02,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/575 HTTP/1.1" 200 None 2024-07-11 08:03:02,934 [ scc.repo] DEBUG # ... Include label: include 2024-07-11 08:03:03,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/049617504722215fa2dff44e8d534a9b7ecd97c9 HTTP/1.1" 200 None 2024-07-11 08:03:03,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/049617504722215fa2dff44e8d534a9b7ecd97c9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:04,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/049617504722215fa2dff44e8d534a9b7ecd97c9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:04,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/049617504722215fa2dff44e8d534a9b7ecd97c9 HTTP/1.1" 200 None 2024-07-11 08:03:05,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/049617504722215fa2dff44e8d534a9b7ecd97c9?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:05,316 [ scc.repo] DEBUG - PR 575 Tom-TBT 'Label sorting with drag and drop' 2024-07-11 08:03:05,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-07-11 08:03:06,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-07-11 08:03:06,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-11 08:03:07,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:07,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:08,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-11 08:03:08,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:08,694 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-11 08:03:09,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-07-11 08:03:09,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-07-11 08:03:10,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b000e028f28537162bf329e0cb3e4fbf7e7bede4 HTTP/1.1" 200 None 2024-07-11 08:03:10,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b000e028f28537162bf329e0cb3e4fbf7e7bede4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:11,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b000e028f28537162bf329e0cb3e4fbf7e7bede4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:11,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b000e028f28537162bf329e0cb3e4fbf7e7bede4 HTTP/1.1" 200 None 2024-07-11 08:03:12,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b000e028f28537162bf329e0cb3e4fbf7e7bede4?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:12,002 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-07-11 08:03:12,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-07-11 08:03:12,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-07-11 08:03:13,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-11 08:03:14,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:14,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:14,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-11 08:03:15,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:15,389 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-07-11 08:03:15,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-07-11 08:03:16,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-07-11 08:03:16,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-11 08:03:17,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:17,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:18,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-11 08:03:18,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:18,724 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-07-11 08:03:18,725 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:03:18,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-11 08:03:18,725 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:18,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:18,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:03:18,736 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:03:18,736 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:03:18,741 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:03:18,746 [ scc.git] DEBUG Already up to date. 2024-07-11 08:03:18,747 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-07-11 08:03:19,460 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:19,460 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-07-11 08:03:19,464 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-11 08:03:20,365 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:20,365 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-11 08:03:20,370 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-11 08:03:21,929 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:21,930 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-11 08:03:21,934 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-07-11 08:03:22,366 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:22,366 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-07-11 08:03:22,370 [ scc.git] DEBUG Calling 'git fetch origin pull/575/head' 2024-07-11 08:03:22,912 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:22,912 [ scc.git] DEBUG * branch refs/pull/575/head -> FETCH_HEAD 2024-07-11 08:03:22,914 [ scc.git] DEBUG Calling 'git fetch origin pull/576/head' 2024-07-11 08:03:23,319 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-11 08:03:23,319 [ scc.git] DEBUG * branch refs/pull/576/head -> FETCH_HEAD 2024-07-11 08:03:23,323 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:03:23,323 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:23,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:23,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-11 08:03:23,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:23,339 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-11 08:03:23,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-07-11 08:03:23,443 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++ 2024-07-11 08:03:23,445 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-) 2024-07-11 08:03:23,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:23,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-11 08:03:23,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:23,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-11 08:03:24,011 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-11 08:03:24,011 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-07-11 08:03:24,011 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-07-11 08:03:24,012 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:24,017 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-07-11 08:03:24,017 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-07-11 08:03:24,017 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-07-11 08:03:24,017 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-07-11 08:03:24,017 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-07-11 08:03:24,018 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-07-11 08:03:24,018 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-07-11 08:03:24,018 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-07-11 08:03:24,018 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-07-11 08:03:24,018 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-07-11 08:03:24,020 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-07-11 08:03:24,020 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-07-11 08:03:24,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:24,180 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b000e028f28537162bf329e0cb3e4fbf7e7bede4' 2024-07-11 08:03:24,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:24,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) b000e028f28537162bf329e0cb3e4fbf7e7bede4' 2024-07-11 08:03:25,278 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-07-11 08:03:25,279 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-11 08:03:25,279 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-07-11 08:03:25,279 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-11 08:03:25,279 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-11 08:03:25,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:25,286 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-07-11 08:03:25,286 [ scc.git] DEBUG omero_figure/urls.py | 8 +++ 2024-07-11 08:03:25,286 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-07-11 08:03:25,286 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-07-11 08:03:25,286 [ scc.git] DEBUG src/index.html | 1 + 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-07-11 08:03:25,287 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-07-11 08:03:25,287 [ scc.git] DEBUG 14 files changed, 161 insertions(+), 14 deletions(-) 2024-07-11 08:03:25,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:25,450 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-11 08:03:25,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:25,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-11 08:03:25,585 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:25,588 [ scc.git] DEBUG setup.py | 2 +- 2024-07-11 08:03:25,588 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-11 08:03:25,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:25,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...049617504722215fa2dff44e8d534a9b7ecd97c9' 2024-07-11 08:03:25,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:25,877 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 575 (Label sorting with drag and drop) 049617504722215fa2dff44e8d534a9b7ecd97c9' 2024-07-11 08:03:25,898 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-11 08:03:25,898 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-11 08:03:25,898 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-11 08:03:25,899 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:25,903 [ scc.git] DEBUG package.json | 1 + 2024-07-11 08:03:25,903 [ scc.git] DEBUG src/css/figure.css | 10 ++-- 2024-07-11 08:03:25,903 [ scc.git] DEBUG src/index.html | 9 ++-- 2024-07-11 08:03:25,903 [ scc.git] DEBUG src/js/views/right_panel_view.js | 92 +++++++++++++++++++++++++++++++-- 2024-07-11 08:03:25,904 [ scc.git] DEBUG src/templates/labels_form.template.html | 2 +- 2024-07-11 08:03:25,904 [ scc.git] DEBUG 5 files changed, 101 insertions(+), 13 deletions(-) 2024-07-11 08:03:26,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:26,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f4b9c3912e5f22ce4ca023e06a5863f5c577598e' 2024-07-11 08:03:26,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:26,289 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 576 (Color picker - popup update) f4b9c3912e5f22ce4ca023e06a5863f5c577598e' 2024-07-11 08:03:26,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:26,355 [ scc.git] DEBUG src/js/views/colorpicker.js | 5 +++-- 2024-07-11 08:03:26,355 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-07-11 08:03:26,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:26,687 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:03:26,725 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:26,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:26,730 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:03:26,765 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:03:26,772 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82f6610> has no local changes 2024-07-11 08:03:26,772 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 575 Tom-TBT 'Label sorting with drag and drop' - PR 576 Rdornier 'Color picker - popup update' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:03:26,781 [ scc.git] DEBUG [detached HEAD 5f04b87a] merge master -Dorg -Ssuccess-only 2024-07-11 08:03:26,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:03:26,782 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:03:27,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-07-11 08:03:27,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-07-11 08:03:28,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-07-11 08:03:28,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-11 08:03:29,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:29,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-11 08:03:30,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:30,024 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-07-11 08:03:30,024 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:03:30,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-11 08:03:30,025 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:30,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:30,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:03:30,035 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:03:30,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:03:30,040 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:03:30,045 [ scc.git] DEBUG Already up to date. 2024-07-11 08:03:30,045 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-07-11 08:03:30,529 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-07-11 08:03:30,530 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-07-11 08:03:30,534 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:03:30,534 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:30,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:30,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-11 08:03:30,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:30,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-11 08:03:30,695 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-07-11 08:03:30,695 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:30,698 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-07-11 08:03:30,698 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-11 08:03:30,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:30,851 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:03:30,888 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:30,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:30,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:03:30,928 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:03:30,934 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fb36b8b0> has no local changes 2024-07-11 08:03:30,934 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:03:30,942 [ scc.git] DEBUG [detached HEAD 68c5752] merge master -Dorg -Ssuccess-only 2024-07-11 08:03:30,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:03:30,942 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:03:31,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-07-11 08:03:31,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-07-11 08:03:31,835 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:03:32,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-11 08:03:32,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:33,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:33,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-11 08:03:34,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:34,387 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-11 08:03:34,387 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:03:34,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-11 08:03:34,388 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:34,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:34,393 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:03:34,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:03:34,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:03:34,403 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:03:34,408 [ scc.git] DEBUG Already up to date. 2024-07-11 08:03:34,408 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-07-11 08:03:34,799 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-07-11 08:03:34,799 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-07-11 08:03:34,803 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:03:34,804 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:34,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:34,809 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-11 08:03:34,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:34,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-11 08:03:34,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:34,832 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-07-11 08:03:34,832 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-07-11 08:03:35,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:35,006 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:03:35,042 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:35,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:35,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:03:35,084 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:03:35,091 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f8302610> has no local changes 2024-07-11 08:03:35,091 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:03:35,098 [ scc.git] DEBUG [detached HEAD 3305485] merge master -Dorg -Ssuccess-only 2024-07-11 08:03:35,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:03:35,099 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:03:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-07-11 08:03:36,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-07-11 08:03:36,033 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:03:36,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-11 08:03:37,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:37,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:38,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-11 08:03:38,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:38,735 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-11 08:03:39,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-07-11 08:03:39,198 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:03:39,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-11 08:03:40,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:40,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:41,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-11 08:03:41,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:41,861 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-11 08:03:42,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-07-11 08:03:42,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-07-11 08:03:43,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-11 08:03:43,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:44,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:44,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-11 08:03:45,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:45,222 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-11 08:03:45,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-07-11 08:03:46,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-07-11 08:03:46,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-11 08:03:47,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:47,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:03:48,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-11 08:03:48,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:48,497 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-07-11 08:03:48,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-07-11 08:03:49,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-07-11 08:03:49,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-11 08:03:50,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:03:50,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-11 08:03:51,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:03:51,332 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-07-11 08:03:51,332 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:03:51,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-11 08:03:51,332 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:51,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:51,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:03:51,343 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:03:51,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:03:51,419 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:03:51,424 [ scc.git] DEBUG Already up to date. 2024-07-11 08:03:51,424 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-07-11 08:03:52,309 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-11 08:03:52,309 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-07-11 08:03:52,313 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-07-11 08:03:54,648 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-11 08:03:54,648 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-07-11 08:03:54,653 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-07-11 08:03:55,363 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-11 08:03:55,364 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-07-11 08:03:55,368 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-07-11 08:03:55,688 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-11 08:03:55,688 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-07-11 08:03:55,692 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-07-11 08:03:56,019 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-11 08:03:56,019 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-07-11 08:03:56,023 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:03:56,023 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:56,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:56,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-11 08:03:56,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:56,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-11 08:03:56,262 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-07-11 08:03:56,263 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:56,266 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-07-11 08:03:56,266 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-07-11 08:03:56,266 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-07-11 08:03:56,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:56,433 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-11 08:03:56,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:56,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-11 08:03:56,763 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-07-11 08:03:56,763 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-07-11 08:03:56,763 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-07-11 08:03:56,763 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-07-11 08:03:56,764 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:56,768 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-07-11 08:03:56,768 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-07-11 08:03:56,768 [ scc.git] DEBUG src/app/header.html | 5 + 2024-07-11 08:03:56,768 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-07-11 08:03:56,768 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-07-11 08:03:56,768 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-07-11 08:03:56,768 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-07-11 08:03:56,768 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-07-11 08:03:56,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:56,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-11 08:03:56,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:56,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-11 08:03:56,998 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-07-11 08:03:56,999 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:57,002 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-07-11 08:03:57,002 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-07-11 08:03:57,002 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-07-11 08:03:57,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:57,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-11 08:03:57,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:57,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-11 08:03:57,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:57,392 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-07-11 08:03:57,392 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-07-11 08:03:57,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:57,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-11 08:03:57,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:57,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-11 08:03:57,909 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-11 08:03:57,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:03:58,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:03:58,161 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:03:58,198 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:03:58,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:03:58,202 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:03:58,240 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:03:58,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fb391df0> has no local changes 2024-07-11 08:03:58,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:03:58,256 [ scc.git] DEBUG [detached HEAD f177494] merge master -Dorg -Ssuccess-only 2024-07-11 08:03:58,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:03:58,257 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:03:58,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-07-11 08:03:59,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-07-11 08:03:59,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-07-11 08:04:00,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-11 08:04:00,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:01,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:04:01,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-11 08:04:01,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:01,955 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-07-11 08:04:01,956 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:01,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-11 08:04:01,956 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:01,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:01,962 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:01,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:01,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:01,973 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:01,978 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:01,979 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-07-11 08:04:02,335 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-07-11 08:04:02,335 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-07-11 08:04:02,339 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:02,339 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:02,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:02,345 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-11 08:04:02,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:02,355 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-11 08:04:02,364 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:02,367 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-07-11 08:04:02,367 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-07-11 08:04:02,367 [ scc.git] DEBUG requirements.txt | 2 +- 2024-07-11 08:04:02,367 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-07-11 08:04:02,367 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-07-11 08:04:02,367 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-07-11 08:04:02,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:02,536 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:02,574 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:02,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:02,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:02,616 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:02,622 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f83144c0> has no local changes 2024-07-11 08:04:02,623 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:02,631 [ scc.git] DEBUG [detached HEAD 6283f84] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:02,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:02,632 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:03,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-07-11 08:04:03,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-07-11 08:04:04,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-07-11 08:04:04,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-11 08:04:05,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:05,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-11 08:04:06,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:06,047 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-11 08:04:06,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-07-11 08:04:07,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-07-11 08:04:07,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-11 08:04:08,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:08,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-11 08:04:08,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:08,860 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-11 08:04:08,860 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:08,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-11 08:04:08,861 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:08,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:08,866 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:08,871 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:08,871 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:08,876 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:08,881 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:08,881 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-07-11 08:04:09,638 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-11 08:04:09,638 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-07-11 08:04:09,643 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-11 08:04:10,245 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-11 08:04:10,245 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-11 08:04:10,249 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:10,249 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:10,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:10,255 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-11 08:04:10,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:10,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-11 08:04:10,334 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-07-11 08:04:10,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-07-11 08:04:10,335 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-11 08:04:10,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-11 08:04:10,335 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:04:10,335 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:04:10,340 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-11 08:04:10,346 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-11 08:04:10,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:10,527 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-11 08:04:10,533 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-11 08:04:10,538 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-07-11 08:04:10,542 [ scc.config] DEBUG Found github.token 2024-07-11 08:04:10,542 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-07-11 08:04:10,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-11 08:04:10,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:10,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-11 08:04:10,583 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-11 08:04:10,583 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-11 08:04:10,583 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-07-11 08:04:10,583 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:04:10,583 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:04:10,588 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-11 08:04:10,595 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-11 08:04:10,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:10,935 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-11 08:04:10,941 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-11 08:04:10,946 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-07-11 08:04:10,950 [ scc.config] DEBUG Found github.token 2024-07-11 08:04:10,950 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-07-11 08:04:10,950 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:10,987 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:10,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:10,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:11,028 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:11,035 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fb379ee0> has no local changes 2024-07-11 08:04:11,035 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:11,042 [ scc.git] DEBUG [detached HEAD 2f23b36] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:11,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:11,043 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:11,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-07-11 08:04:12,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-07-11 08:04:12,013 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:04:12,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-11 08:04:13,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:13,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:04:14,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-11 08:04:14,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:14,617 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-11 08:04:15,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-07-11 08:04:15,078 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:04:15,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-11 08:04:16,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:16,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:04:17,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-11 08:04:17,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:17,753 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-11 08:04:18,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-07-11 08:04:18,213 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-11 08:04:18,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-11 08:04:19,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:19,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:04:20,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-11 08:04:20,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:20,777 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-11 08:04:21,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-07-11 08:04:21,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-07-11 08:04:22,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-07-11 08:04:22,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-07-11 08:04:23,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-07-11 08:04:23,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-07-11 08:04:23,653 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:23,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-11 08:04:23,653 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:23,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:23,659 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:23,663 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:23,664 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:23,668 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:23,674 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:23,674 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-07-11 08:04:24,051 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-11 08:04:24,051 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-07-11 08:04:24,056 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-07-11 08:04:24,389 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-11 08:04:24,389 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-07-11 08:04:24,394 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-07-11 08:04:24,780 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-11 08:04:24,780 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-07-11 08:04:24,784 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:24,785 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:24,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:24,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-11 08:04:24,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:24,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-11 08:04:24,809 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:24,812 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-07-11 08:04:24,812 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-07-11 08:04:24,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:24,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-11 08:04:24,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:24,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-11 08:04:25,041 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-11 08:04:25,042 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:25,045 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-07-11 08:04:25,045 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-07-11 08:04:25,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:25,381 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-11 08:04:25,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:25,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-11 08:04:25,452 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-11 08:04:25,453 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:25,456 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-07-11 08:04:25,456 [ scc.git] DEBUG package.json | 2 +- 2024-07-11 08:04:25,456 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-07-11 08:04:25,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:25,802 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:25,838 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:25,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:25,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:25,877 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:25,883 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82bb880> has no local changes 2024-07-11 08:04:25,884 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:25,891 [ scc.git] DEBUG [detached HEAD c34fe9f] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:25,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:25,892 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:26,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-07-11 08:04:26,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-07-11 08:04:27,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-11 08:04:27,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:28,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-11 08:04:28,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:28,698 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-07-11 08:04:28,698 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:28,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-11 08:04:28,698 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:28,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:28,703 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:28,707 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:28,707 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:28,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:28,717 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:28,717 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-11 08:04:29,128 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-07-11 08:04:29,129 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-11 08:04:29,132 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:29,132 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:29,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:29,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-11 08:04:29,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:29,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-11 08:04:29,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:29,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:29,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:29,365 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:29,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:29,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:29,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:29,411 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f8302490> has no local changes 2024-07-11 08:04:29,411 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:29,418 [ scc.git] DEBUG [detached HEAD 464bfdb] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:29,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:29,419 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:29,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-07-11 08:04:30,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-07-11 08:04:30,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-07-11 08:04:31,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-07-11 08:04:31,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-11 08:04:32,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:32,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-11 08:04:33,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:33,225 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-11 08:04:33,225 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:33,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-11 08:04:33,225 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:33,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:33,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:33,235 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:33,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:33,240 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:33,245 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:33,246 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-07-11 08:04:33,727 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-07-11 08:04:33,727 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-07-11 08:04:33,730 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:33,730 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:33,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:33,735 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-11 08:04:33,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:33,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-11 08:04:33,753 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-07-11 08:04:33,754 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:33,756 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-07-11 08:04:33,756 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-07-11 08:04:33,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:33,909 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:33,945 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:33,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:33,950 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:33,986 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:33,991 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f8331c70> has no local changes 2024-07-11 08:04:33,991 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:33,999 [ scc.git] DEBUG [detached HEAD 41501e1] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:33,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:33,999 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:34,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-07-11 08:04:34,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-07-11 08:04:35,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-07-11 08:04:35,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-11 08:04:36,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:36,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-11 08:04:37,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:37,382 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-11 08:04:37,382 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:37,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-11 08:04:37,383 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:37,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:37,388 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:37,392 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:37,392 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:37,397 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:37,402 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:37,402 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-11 08:04:37,933 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-07-11 08:04:37,934 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-11 08:04:37,937 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:37,937 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:37,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:37,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-11 08:04:37,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:37,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-11 08:04:37,985 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-07-11 08:04:37,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-07-11 08:04:37,985 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-07-11 08:04:37,985 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-07-11 08:04:37,985 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-07-11 08:04:37,986 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-07-11 08:04:37,986 [ scc.git] DEBUG Auto-merging setup.py 2024-07-11 08:04:37,986 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-07-11 08:04:37,986 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:04:37,986 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:04:37,990 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-11 08:04:37,996 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-11 08:04:38,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:38,153 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-11 08:04:38,158 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-11 08:04:38,163 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py - omero_signup/views.py --conflicts 2024-07-11 08:04:38,167 [ scc.config] DEBUG Found github.token 2024-07-11 08:04:38,167 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-07-11 08:04:38,167 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:38,203 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:38,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:38,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:38,243 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:38,248 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82ffd30> has no local changes 2024-07-11 08:04:38,248 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:38,256 [ scc.git] DEBUG [detached HEAD 9bfaa3d] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:38,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:38,256 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:38,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-07-11 08:04:39,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-07-11 08:04:39,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-07-11 08:04:40,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-11 08:04:40,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:41,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-11 08:04:41,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:41,475 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-11 08:04:41,475 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:41,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-11 08:04:41,475 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:41,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:41,480 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:41,484 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:41,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:41,489 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:41,495 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:41,495 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-07-11 08:04:42,073 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-07-11 08:04:42,073 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-07-11 08:04:42,077 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:42,077 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:42,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-07-11 08:04:42,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-07-11 08:04:42,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-07-11 08:04:42,158 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-07-11 08:04:42,160 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-07-11 08:04:42,160 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-07-11 08:04:42,160 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-07-11 08:04:42,160 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-07-11 08:04:42,160 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-07-11 08:04:42,160 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-07-11 08:04:42,161 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-07-11 08:04:42,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:42,324 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:42,360 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:42,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,364 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:42,399 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:42,405 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82ccbe0> has no local changes 2024-07-11 08:04:42,405 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:42,414 [ scc.git] DEBUG [detached HEAD c49359f] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:42,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:42,414 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:42,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-07-11 08:04:42,742 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:42,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-11 08:04:42,742 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:42,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,747 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:42,751 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:42,751 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:42,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:42,761 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:42,761 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:42,761 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:42,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,767 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:42,804 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:42,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:42,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:42,845 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:42,851 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82be490> has no local changes 2024-07-11 08:04:42,851 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:42,858 [ scc.git] DEBUG [detached HEAD 99b0b9f] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:42,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:42,859 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:43,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-07-11 08:04:43,174 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:43,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-11 08:04:43,174 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:43,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:43,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:43,184 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:43,184 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:43,189 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:43,194 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:43,194 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:43,194 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:43,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:43,198 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:43,234 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:43,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:43,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:43,275 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:43,282 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f8294490> has no local changes 2024-07-11 08:04:43,282 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:43,290 [ scc.git] DEBUG [detached HEAD db18c4c] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:43,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:43,290 [ scc.git] INFO Overriding base-branch from master to main 2024-07-11 08:04:43,290 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:43,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-07-11 08:04:44,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-07-11 08:04:44,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-07-11 08:04:45,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-07-11 08:04:45,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-11 08:04:46,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:46,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-11 08:04:47,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-11 08:04:47,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:47,536 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-11 08:04:47,536 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:47,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-11 08:04:47,536 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:47,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:47,542 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-07-11 08:04:47,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:47,547 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-07-11 08:04:47,552 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-07-11 08:04:47,557 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:47,557 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-07-11 08:04:48,068 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-07-11 08:04:48,068 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-07-11 08:04:48,072 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:48,072 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:48,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-11 08:04:48,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-11 08:04:48,184 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-07-11 08:04:48,184 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-07-11 08:04:48,184 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:04:48,184 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:04:48,189 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-11 08:04:48,195 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-11 08:04:48,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:48,354 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-11 08:04:48,359 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-11 08:04:48,364 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-07-11 08:04:48,368 [ scc.config] DEBUG Found github.token 2024-07-11 08:04:48,368 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-07-11 08:04:48,368 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:48,406 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:48,406 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,410 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:48,447 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:48,452 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f82454f0> has no local changes 2024-07-11 08:04:48,453 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:48,460 [ scc.git] DEBUG [detached HEAD 4ff5ae7] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:48,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:48,460 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:48,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-07-11 08:04:48,801 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:48,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-11 08:04:48,801 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:48,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,806 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:48,810 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:48,810 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:48,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:48,820 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:48,820 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:48,820 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:48,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,825 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:48,861 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:48,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:48,865 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:48,900 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:48,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f829bf40> has no local changes 2024-07-11 08:04:48,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:48,913 [ scc.git] DEBUG [detached HEAD a91371e] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:48,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:48,913 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:49,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-07-11 08:04:49,233 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:49,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-11 08:04:49,234 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:49,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:49,238 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:49,243 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:49,243 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:49,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:49,253 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:49,253 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:49,253 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:49,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:49,258 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:49,294 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:49,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:49,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:49,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:49,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f826e700> has no local changes 2024-07-11 08:04:49,340 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:49,347 [ scc.git] DEBUG [detached HEAD d9e376c] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:49,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:49,348 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:49,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-07-11 08:04:50,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-07-11 08:04:50,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-07-11 08:04:51,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-11 08:04:51,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:52,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-11 08:04:52,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:52,709 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-07-11 08:04:52,709 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:04:52,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-11 08:04:52,709 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:52,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:52,715 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-11 08:04:52,719 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:04:52,719 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-11 08:04:52,724 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-11 08:04:52,729 [ scc.git] DEBUG Already up to date. 2024-07-11 08:04:52,730 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-07-11 08:04:53,190 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-07-11 08:04:53,190 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-07-11 08:04:53,194 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:04:53,194 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:53,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:53,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-11 08:04:53,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:53,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-11 08:04:53,310 [ scc.git] DEBUG Auto-merging Dockerfile 2024-07-11 08:04:53,310 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-07-11 08:04:53,310 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:04:53,310 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:04:53,315 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-11 08:04:53,322 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-11 08:04:53,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:04:53,485 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-11 08:04:53,490 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-11 08:04:53,495 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-07-11 08:04:53,500 [ scc.config] DEBUG Found github.token 2024-07-11 08:04:53,500 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-07-11 08:04:53,500 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:04:53,536 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:04:53,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:04:53,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:04:53,576 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:04:53,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f8201df0> has no local changes 2024-07-11 08:04:53,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:04:53,590 [ scc.git] DEBUG [detached HEAD de6ea8d] merge master -Dorg -Ssuccess-only 2024-07-11 08:04:53,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:04:53,591 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-11 08:04:53,591 [ scc.repo] DEBUG ## PRs found: 2024-07-11 08:04:54,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-11 08:04:54,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-11 08:04:55,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-11 08:04:55,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-11 08:04:56,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-11 08:04:56,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-11 08:04:57,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-11 08:04:57,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-11 08:04:58,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-11 08:04:58,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-11 08:04:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-11 08:04:59,008 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-11 08:04:59,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-11 08:05:00,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-11 08:05:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-11 08:05:01,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-11 08:05:01,022 [ scc.repo] DEBUG ## Branches found: 2024-07-11 08:05:01,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-11 08:05:01,022 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:05:01,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:05:01,028 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-11 08:05:01,033 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-11 08:05:01,033 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-11 08:05:01,038 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-11 08:05:01,043 [ scc.git] DEBUG Already up to date. 2024-07-11 08:05:01,043 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-11 08:05:02,944 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-07-11 08:05:02,944 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-11 08:05:02,948 [ scc.git] DEBUG ## Unique users: [] 2024-07-11 08:05:02,948 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:05:02,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:05:02,954 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 08:05:02,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:05:02,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 08:05:03,121 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-11 08:05:03,121 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-11 08:05:03,121 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-11 08:05:03,121 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-11 08:05:03,126 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-11 08:05:03,132 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-11 08:05:03,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:03,286 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-11 08:05:03,292 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-11 08:05:03,297 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#119](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-11 08:05:03,302 [ scc.config] DEBUG Found github.token 2024-07-11 08:05:03,302 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-11 08:05:03,302 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-11 08:05:03,338 [ scc.git] DEBUG Get sha1 of %s 2024-07-11 08:05:03,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-11 08:05:03,343 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:05:03,378 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:05:03,384 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26f826bee0> has no local changes 2024-07-11 08:05:03,384 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:05:03,391 [ scc.git] DEBUG [detached HEAD cb28a9e] merge master -Dorg -Ssuccess-only 2024-07-11 08:05:03,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:03,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-11 08:05:03,462 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-07-11 08:05:03,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:03,730 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-07-11 08:05:03,734 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-07-11 08:05:04,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:04,161 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-07-11 08:05:04,166 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-07-11 08:05:04,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:04,581 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-07-11 08:05:04,586 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-07-11 08:05:04,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:05,001 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-07-11 08:05:05,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:05,420 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-07-11 08:05:05,424 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-07-11 08:05:05,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:05,832 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-07-11 08:05:05,836 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-07-11 08:05:06,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:06,241 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-07-11 08:05:06,245 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-07-11 08:05:06,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:06,648 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-07-11 08:05:06,652 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-07-11 08:05:07,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:07,056 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-07-11 08:05:07,060 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-07-11 08:05:07,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:07,481 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-07-11 08:05:07,485 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-07-11 08:05:07,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:07,902 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-07-11 08:05:07,907 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-07-11 08:05:08,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:08,317 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-07-11 08:05:08,321 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-07-11 08:05:08,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:08,729 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-07-11 08:05:09,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:09,142 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-07-11 08:05:09,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:09,553 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-07-11 08:05:09,557 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-07-11 08:05:09,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:09,967 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-07-11 08:05:10,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:10,384 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-07-11 08:05:10,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:10,798 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-07-11 08:05:10,802 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-07-11 08:05:11,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:11,204 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-07-11 08:05:11,208 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-07-11 08:05:11,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:11,620 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-07-11 08:05:11,624 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-07-11 08:05:12,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:12,045 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-07-11 08:05:12,049 [ scc.config] DEBUG Found submodule.scripts.url 2024-07-11 08:05:12,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-11 08:05:12,469 [ scc.config] DEBUG Found submodule.scripts.branch 2024-07-11 08:05:12,469 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-11 08:05:12,544 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f26fc468d60> has local changes 2024-07-11 08:05:12,544 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 575 Tom-TBT 'Label sorting with drag and drop' - PR 576 Rdornier 'Color picker - popup update' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#119 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/119/)' 2024-07-11 08:05:12,558 [ scc.git] DEBUG [detached HEAD f2588e0] merge master -Dorg -Ssuccess-only 2024-07-11 08:05:12,558 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-07-11 08:05:12,558 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-11 08:05:12,558 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,558 [ scc.merge] INFO 2024-07-11 08:05:12,558 [ scc.merge] INFO 2024-07-11 08:05:12,558 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-07-11 08:05:12,558 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,558 [ scc.merge] INFO 2024-07-11 08:05:12,558 [ scc.merge] INFO 2024-07-11 08:05:12,558 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-07-11 08:05:12,558 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,558 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-07-11 08:05:12,558 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-07-11 08:05:12,559 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-07-11 08:05:12,559 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-07-11 08:05:12,559 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-07-11 08:05:12,559 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Repository: ome/omero-figure 2024-07-11 08:05:12,559 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (user: Rdornier) 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-07-11 08:05:12,559 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,559 [ scc.merge] INFO 2024-07-11 08:05:12,559 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-07-11 08:05:12,559 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 575 Tom-TBT 'Label sorting with drag and drop' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 576 Rdornier 'Color picker - popup update' 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-07-11 08:05:12,560 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Repository: ome/omero-gallery 2024-07-11 08:05:12,560 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-07-11 08:05:12,560 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-07-11 08:05:12,560 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Repository: ome/omero-mapr 2024-07-11 08:05:12,560 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-07-11 08:05:12,560 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,560 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-07-11 08:05:12,560 [ scc.merge] INFO 2024-07-11 08:05:12,560 [ scc.merge] INFO Repository: ome/omero-metadata 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Repository: ome/omero-parade 2024-07-11 08:05:12,561 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Repository: ome/omero-rois 2024-07-11 08:05:12,561 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Repository: ome/omero-signup 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,561 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-11 08:05:12,561 [ scc.merge] INFO 2024-07-11 08:05:12,561 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-07-11 08:05:12,561 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Merged PRs: 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: ome/omero-upload 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-07-11 08:05:12,562 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-07-11 08:05:12,562 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-07-11 08:05:12,562 [ scc.merge] INFO 2024-07-11 08:05:12,562 [ scc.merge] INFO Repository: ome/scripts 2024-07-11 08:05:12,562 [ scc.merge] INFO Excluded PRs: 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-11 08:05:12,562 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-11 08:05:12,563 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-11 08:05:12,563 [ scc.merge] INFO Already up to date. 2024-07-11 08:05:12,563 [ scc.merge] INFO 2024-07-11 08:05:12,563 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-11 08:05:12,563 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-11 08:05:12,563 [ scc.merge] INFO 2024-07-11 08:05:12,563 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-11 08:05:12,563 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-11 08:05:12,567 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-11 08:05:12,572 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-11 08:05:12,576 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-11 08:05:12,581 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-11 08:05:12,585 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-11 08:05:12,590 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-11 08:05:12,595 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-11 08:05:12,599 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-11 08:05:12,604 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-11 08:05:12,608 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-11 08:05:12,613 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-11 08:05:12,617 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-11 08:05:12,622 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-11 08:05:12,626 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-11 08:05:12,631 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-11 08:05:12,635 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-11 08:05:12,640 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-11 08:05:12,644 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-11 08:05:12,649 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-11 08:05:12,653 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-11 08:05:12,658 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-11 08:05:12,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-11 08:05:12,662 [ scc.git] DEBUG Calling 'git remote' 2024-07-11 08:05:12,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 04411b9] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 64566080 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD d791e9a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-11 08:05:59,904 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-11 08:06:09,166 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-11 08:06:11,637 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-11 08:06:16,249 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-11 08:07:05,250 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS