![[Jenkins]](/jenkins/static/eed02e22/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 149 originally caused by: Started by user devspace Restarted from build #148, stage OMERO Python [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 296246fd4b5f1e18329dee48f3211ab7ee23ee7c (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 296246fd4b5f1e18329dee48f3211ab7ee23ee7c # timeout=10 Commit message: "Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c" > git rev-list --no-walk 296246fd4b5f1e18329dee48f3211ab7ee23ee7c # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 129 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.1.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.7.4-py3-none-any.whl (162 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-07-24 08:57:18,361 [ scc.config] DEBUG Found github.token 2024-07-24 08:57:18,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-24 08:57:18,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:57:19,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:57:19,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-24 08:57:19,426 [ scc.gh] DEBUG 4670 remaining from 5000 (Reset at 09:07 2024-07-24 08:57:19,427 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:19,430 [ scc.git] DEBUG Check current status 2024-07-24 08:57:19,430 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:19,433 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-24 08:57:19,434 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:19,476 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-24 08:57:19,478 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-24 08:57:19,481 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-24 08:57:19,484 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-24 08:57:19,593 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-24 08:57:19,595 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-24 08:57:19,597 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-24 08:57:19,600 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-24 08:57:19,603 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-24 08:57:19,606 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-24 08:57:19,608 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-24 08:57:19,611 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-24 08:57:19,613 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-24 08:57:19,616 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-24 08:57:19,702 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-24 08:57:19,704 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-24 08:57:19,707 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-24 08:57:19,709 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-24 08:57:19,711 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-24 08:57:19,714 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-24 08:57:19,716 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-24 08:57:19,719 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-24 08:57:19,723 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:19,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-24 08:57:20,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:20,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:21,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:21,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:21,855 [ scc.git] DEBUG Resetting... 2024-07-24 08:57:21,855 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-24 08:57:21,864 [ scc.git] DEBUG HEAD is now at 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-24 08:57:21,864 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-24 08:57:21,954 [ scc.git] DEBUG Check current status 2024-07-24 08:57:21,955 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:21,959 [ scc.git] DEBUG 296246f Merge pull request #382 from ome/dependabot/submodules/omero-figure-fefe87c 2024-07-24 08:57:21,959 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:22,000 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-24 08:57:22,002 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-24 08:57:22,005 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-24 08:57:22,007 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-24 08:57:22,014 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-24 08:57:22,017 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-24 08:57:22,019 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-24 08:57:22,022 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-24 08:57:22,025 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-24 08:57:22,027 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-24 08:57:22,030 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-24 08:57:22,032 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-24 08:57:22,035 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-24 08:57:22,037 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-24 08:57:22,040 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-24 08:57:22,043 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-24 08:57:22,045 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-24 08:57:22,047 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-24 08:57:22,050 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-24 08:57:22,052 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-24 08:57:22,055 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-24 08:57:22,058 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-24 08:57:22,059 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-24 08:57:22,059 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-24 08:57:22,059 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-24 08:57:22,059 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-24 08:57:22,059 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-24 08:57:22,059 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:57:22,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-24 08:57:22,376 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:57:22,376 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:57:22,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:57:22,380 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:57:22,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:57:22,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:57:22,387 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:57:22,390 [ scc.git] DEBUG Already up to date. 2024-07-24 08:57:22,391 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:57:22,391 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:57:22,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:57:22,394 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:57:22,439 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:57:22,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:57:22,442 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:57:23,980 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f78e4da3460> has no local changes 2024-07-24 08:57:23,981 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:57:24,046 [ scc.git] DEBUG [detached HEAD a29bd33] merge master -Dorg -Snone 2024-07-24 08:57:24,046 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-24 08:57:24,047 [ scc.merge] INFO Already up to date. 2024-07-24 08:57:24,047 [ scc.merge] INFO 2024-07-24 08:57:24,047 [ scc.merge] INFO 2024-07-24 08:57:24,047 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-24 08:57:24,047 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-07-24 08:57:33,032 [ scc.config] DEBUG Found github.token 2024-07-24 08:57:33,034 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-07-24 08:57:33,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:57:33,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:57:34,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-07-24 08:57:34,116 [ scc.gh] DEBUG 4662 remaining from 5000 (Reset at 09:07 2024-07-24 08:57:34,116 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:34,120 [ scc.git] DEBUG Check current status 2024-07-24 08:57:34,120 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:34,123 [ scc.git] DEBUG a29bd33 merge master -Dorg -Snone 2024-07-24 08:57:34,123 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:34,165 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-24 08:57:34,167 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-24 08:57:34,170 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-24 08:57:34,172 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-24 08:57:34,179 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-24 08:57:34,182 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-24 08:57:34,184 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-24 08:57:34,187 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-24 08:57:34,190 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-24 08:57:34,192 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-24 08:57:34,195 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-24 08:57:34,197 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-24 08:57:34,200 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-24 08:57:34,202 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-24 08:57:34,205 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-24 08:57:34,208 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-24 08:57:34,210 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-24 08:57:34,212 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-24 08:57:34,215 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-24 08:57:34,217 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-24 08:57:34,220 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-24 08:57:34,223 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-24 08:57:34,226 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:34,227 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-07-24 08:57:34,229 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-07-24 08:57:34,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-07-24 08:57:35,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:35,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:35,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:36,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:36,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:36,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-24 08:57:36,409 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:36,411 [ scc.git] DEBUG Check current status 2024-07-24 08:57:36,412 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:36,415 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-07-24 08:57:36,415 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:36,451 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:36,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-07-24 08:57:37,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:37,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:38,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:38,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:38,650 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:38,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:38,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-24 08:57:38,684 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:38,688 [ scc.git] DEBUG Check current status 2024-07-24 08:57:38,688 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:38,691 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-07-24 08:57:38,691 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:38,727 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:39,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-07-24 08:57:39,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:40,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:40,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:40,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:40,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:40,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:40,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-24 08:57:40,957 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:40,960 [ scc.git] DEBUG Check current status 2024-07-24 08:57:40,960 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:40,963 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-07-24 08:57:40,963 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:40,999 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:41,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-07-24 08:57:41,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:42,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:42,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:43,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:43,235 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:43,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:43,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-24 08:57:43,270 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:43,273 [ scc.git] DEBUG Check current status 2024-07-24 08:57:43,273 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:43,277 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-24 08:57:43,277 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:43,313 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:43,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-07-24 08:57:44,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:44,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:45,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:45,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:45,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:45,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:45,608 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-24 08:57:45,608 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:45,611 [ scc.git] DEBUG Check current status 2024-07-24 08:57:45,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:45,665 [ scc.git] DEBUG fefe87cf Merge pull request #575 from Tom-TBT/labelsort 2024-07-24 08:57:45,665 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:45,701 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:46,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-07-24 08:57:46,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:46,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:47,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:47,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:47,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:47,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:47,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-24 08:57:47,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:47,881 [ scc.git] DEBUG Check current status 2024-07-24 08:57:47,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:47,885 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-24 08:57:47,885 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:47,921 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:48,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-07-24 08:57:48,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:49,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:49,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:50,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:50,149 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:50,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:50,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-24 08:57:50,184 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:50,187 [ scc.git] DEBUG Check current status 2024-07-24 08:57:50,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:50,191 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-07-24 08:57:50,191 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:50,227 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:50,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-07-24 08:57:51,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:51,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:51,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:52,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:52,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:52,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:52,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-24 08:57:52,407 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:52,411 [ scc.git] DEBUG Check current status 2024-07-24 08:57:52,411 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:52,414 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-07-24 08:57:52,415 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:52,451 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:52,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-07-24 08:57:53,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:53,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:54,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:54,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:54,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:54,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:54,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-24 08:57:54,687 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:54,690 [ scc.git] DEBUG Check current status 2024-07-24 08:57:54,691 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:54,694 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-07-24 08:57:54,694 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:54,731 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:55,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-07-24 08:57:55,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:56,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:56,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:57,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:57,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:57,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:57,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-24 08:57:57,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:57,048 [ scc.git] DEBUG Check current status 2024-07-24 08:57:57,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:57,052 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-24 08:57:57,052 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:57,089 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:57,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-07-24 08:57:58,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:57:58,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:57:58,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:57:59,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:57:59,318 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:57:59,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:57:59,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-24 08:57:59,355 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:57:59,359 [ scc.git] DEBUG Check current status 2024-07-24 08:57:59,359 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:57:59,363 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-07-24 08:57:59,363 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:57:59,400 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:57:59,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-07-24 08:58:00,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:00,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:01,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:01,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:01,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:01,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:01,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-24 08:58:01,587 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:01,591 [ scc.git] DEBUG Check current status 2024-07-24 08:58:01,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:01,595 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-07-24 08:58:01,595 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:01,634 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:02,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-07-24 08:58:02,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:02,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:03,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:03,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:03,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:03,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:03,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-24 08:58:03,863 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:03,866 [ scc.git] DEBUG Check current status 2024-07-24 08:58:03,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:03,870 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-07-24 08:58:03,871 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:03,908 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:04,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-07-24 08:58:04,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:05,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:05,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:06,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:06,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:06,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:06,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-24 08:58:06,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:06,089 [ scc.git] DEBUG Check current status 2024-07-24 08:58:06,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:06,093 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-24 08:58:06,093 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:06,130 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:06,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-07-24 08:58:07,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:07,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:07,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:08,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:08,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:08,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:08,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-24 08:58:08,407 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:08,411 [ scc.git] DEBUG Check current status 2024-07-24 08:58:08,411 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:08,415 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-07-24 08:58:08,415 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:08,452 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:08,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-24 08:58:08,792 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-24 08:58:09,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-07-24 08:58:09,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:09,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:10,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:10,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:10,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:10,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:10,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-24 08:58:10,775 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:10,779 [ scc.git] DEBUG Check current status 2024-07-24 08:58:10,779 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:10,783 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-07-24 08:58:10,783 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:10,821 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:11,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-07-24 08:58:11,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:12,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:12,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:13,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:13,032 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:13,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:13,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-24 08:58:13,068 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:13,072 [ scc.git] DEBUG Check current status 2024-07-24 08:58:13,072 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:13,076 [ scc.git] DEBUG deab817 update setup-python to v4 2024-07-24 08:58:13,076 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:13,114 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:13,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-07-24 08:58:14,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:14,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:14,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:15,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:15,332 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:15,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:15,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-24 08:58:15,368 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:15,372 [ scc.git] DEBUG Check current status 2024-07-24 08:58:15,372 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:15,376 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-24 08:58:15,376 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:15,414 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:15,415 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-07-24 08:58:15,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-07-24 08:58:16,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:16,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:17,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:17,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:17,537 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:17,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:17,574 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-24 08:58:17,574 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:17,578 [ scc.git] DEBUG Check current status 2024-07-24 08:58:17,578 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:17,582 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-07-24 08:58:17,582 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:17,620 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:17,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-24 08:58:17,972 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-24 08:58:18,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-07-24 08:58:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:19,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:19,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:19,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:19,993 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:20,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:20,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-24 08:58:20,029 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:20,033 [ scc.git] DEBUG Check current status 2024-07-24 08:58:20,033 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:20,038 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-07-24 08:58:20,038 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:20,076 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:20,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-24 08:58:20,419 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-24 08:58:20,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-07-24 08:58:21,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:21,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:21,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:22,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:22,413 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:22,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:22,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-24 08:58:22,449 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:22,453 [ scc.git] DEBUG Check current status 2024-07-24 08:58:22,453 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:22,457 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-24 08:58:22,458 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:22,495 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:22,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-07-24 08:58:23,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:23,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:24,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:24,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:24,660 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:24,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:24,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-24 08:58:24,696 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-07-24 08:58:24,700 [ scc.git] DEBUG Check current status 2024-07-24 08:58:24,700 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:24,794 [ scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-24 08:58:24,794 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:24,832 [ scc.config] DEBUG Found remote.origin.url 2024-07-24 08:58:24,832 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-07-24 08:58:25,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-24 08:58:25,087 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-24 08:58:25,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-07-24 08:58:25,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-07-24 08:58:26,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-07-24 08:58:26,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:27,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-07-24 08:58:27,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:27,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:27,360 [ scc.git] DEBUG Resetting... 2024-07-24 08:58:27,360 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-07-24 08:58:27,369 [ scc.git] DEBUG HEAD is now at a29bd33 merge master -Dorg -Snone 2024-07-24 08:58:27,369 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-07-24 08:58:27,459 [ scc.git] DEBUG Check current status 2024-07-24 08:58:27,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-07-24 08:58:27,464 [ scc.git] DEBUG a29bd33 merge master -Dorg -Snone 2024-07-24 08:58:27,464 [ scc.git] DEBUG Calling 'git submodule status' 2024-07-24 08:58:27,506 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-07-24 08:58:27,508 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-07-24 08:58:27,511 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-07-24 08:58:27,513 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-07-24 08:58:27,520 [ scc.git] DEBUG fefe87cffc62034eb6bf0f596f2eea4937e9bd4e omero-figure (v7.0.0-13-gfefe87cf) 2024-07-24 08:58:27,523 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-07-24 08:58:27,525 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-07-24 08:58:27,528 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-07-24 08:58:27,531 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-07-24 08:58:27,534 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-07-24 08:58:27,536 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-07-24 08:58:27,538 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-07-24 08:58:27,541 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-07-24 08:58:27,544 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-07-24 08:58:27,547 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-07-24 08:58:27,549 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-07-24 08:58:27,551 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-07-24 08:58:27,553 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-07-24 08:58:27,556 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-07-24 08:58:27,558 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-07-24 08:58:27,561 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-07-24 08:58:27,564 [ scc.git] DEBUG c20d2734b711c659cecea83db6e2ebd7b7013636 scripts (v5.8.2-3-gc20d273) 2024-07-24 08:58:27,565 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-07-24 08:58:27,565 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-07-24 08:58:27,565 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-07-24 08:58:27,565 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-07-24 08:58:27,565 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-07-24 08:58:27,565 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-07-24 08:58:27,565 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:58:27,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-07-24 08:58:27,789 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:58:27,789 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:27,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:27,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:58:27,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:58:27,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:58:27,802 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:58:27,806 [ scc.git] DEBUG Already up to date. 2024-07-24 08:58:27,807 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:58:27,807 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:27,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:27,811 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:58:27,857 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:27,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:27,861 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:58:28,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-07-24 08:58:28,203 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:58:28,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-24 08:58:28,203 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:28,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:28,207 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:58:28,211 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:58:28,211 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:58:28,216 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:58:28,221 [ scc.git] DEBUG Already up to date. 2024-07-24 08:58:28,221 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:58:28,221 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:28,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:28,225 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:58:28,260 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:28,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:28,264 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:28,298 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:58:28,303 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba65be340> has no local changes 2024-07-24 08:58:28,304 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:58:28,311 [ scc.git] DEBUG [detached HEAD fe3ce8e] merge master -Dorg -Ssuccess-only 2024-07-24 08:58:28,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:28,311 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:58:28,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-07-24 08:58:29,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-07-24 08:58:29,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-07-24 08:58:30,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-24 08:58:30,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:31,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:58:31,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-07-24 08:58:32,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:58:32,309 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-07-24 08:58:32,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-07-24 08:58:33,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-07-24 08:58:33,411 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:58:33,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-24 08:58:33,411 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:33,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:33,416 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:58:33,420 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:58:33,420 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:58:33,425 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:58:33,429 [ scc.git] DEBUG Already up to date. 2024-07-24 08:58:33,429 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-07-24 08:58:33,943 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-07-24 08:58:33,943 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-07-24 08:58:33,947 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:58:33,947 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:33,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:33,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-24 08:58:33,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:33,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-07-24 08:58:34,034 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:58:34,036 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-07-24 08:58:34,037 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-07-24 08:58:34,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:58:34,210 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:58:34,245 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:34,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:34,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:34,284 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:58:34,289 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba72a3bb0> has no local changes 2024-07-24 08:58:34,289 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:58:34,296 [ scc.git] DEBUG [detached HEAD b21104a] merge master -Dorg -Ssuccess-only 2024-07-24 08:58:34,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:34,297 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:58:34,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-07-24 08:58:35,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-07-24 08:58:35,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-07-24 08:58:36,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-24 08:58:36,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:37,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-07-24 08:58:37,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:58:37,802 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-24 08:58:38,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-07-24 08:58:38,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-24 08:58:39,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:39,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-07-24 08:58:40,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:58:40,183 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-07-24 08:58:40,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-07-24 08:58:41,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-07-24 08:58:41,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-07-24 08:58:41,966 [urllib3.util] DEBUG Incremented Retry for (url='/repos/ome/omero-cli-render/issues/59/comments'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2024-07-24 08:58:41,966 [urllib3.conn] WARNI Retrying (GithubRetry(total=9, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProtocolError('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))': /repos/ome/omero-cli-render/issues/59/comments 2024-07-24 08:58:41,967 [urllib3.conn] DEBUG Starting new HTTPS connection (2): api.github.com:443 2024-07-24 08:58:42,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-07-24 08:58:42,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-24 08:58:43,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:43,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-07-24 08:58:44,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:58:44,199 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-07-24 08:58:44,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-07-24 08:58:45,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-07-24 08:58:45,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-07-24 08:58:46,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-07-24 08:58:46,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-07-24 08:58:46,558 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:58:46,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-24 08:58:46,558 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:46,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:46,563 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:58:46,568 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:58:46,568 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:58:46,572 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:58:46,577 [ scc.git] DEBUG Already up to date. 2024-07-24 08:58:46,578 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-07-24 08:58:47,046 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-24 08:58:47,046 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-07-24 08:58:47,050 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-07-24 08:58:47,416 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-24 08:58:47,416 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-07-24 08:58:47,419 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-24 08:58:47,881 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-07-24 08:58:47,881 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-24 08:58:47,884 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:58:47,884 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:47,884 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:47,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-24 08:58:47,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:47,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-07-24 08:58:47,907 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:58:47,909 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-07-24 08:58:47,909 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-07-24 08:58:48,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:58:48,080 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-24 08:58:48,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:48,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-07-24 08:58:48,161 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-24 08:58:48,161 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:58:48,164 [ scc.git] DEBUG setup.py | 3 +-- 2024-07-24 08:58:48,164 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-07-24 08:58:48,164 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-07-24 08:58:48,164 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-07-24 08:58:48,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:58:48,493 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-24 08:58:48,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:48,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-07-24 08:58:48,647 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-07-24 08:58:48,648 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-07-24 08:58:48,648 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:58:48,651 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-07-24 08:58:48,651 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-07-24 08:58:48,651 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-07-24 08:58:48,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:58:48,922 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:58:48,956 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:58:48,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:58:48,961 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:58:48,995 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:58:49,000 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54dacd0> has no local changes 2024-07-24 08:58:49,001 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:58:49,010 [ scc.git] DEBUG [detached HEAD 2f29f4b] merge master -Dorg -Ssuccess-only 2024-07-24 08:58:49,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:58:49,010 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:58:49,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-07-24 08:58:49,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-07-24 08:58:50,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-07-24 08:58:51,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-07-24 08:58:51,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-24 08:58:52,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:52,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:58:52,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-24 08:58:53,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:53,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-07-24 08:58:54,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-07-24 08:58:54,374 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-07-24 08:58:54,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-07-24 08:58:55,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-07-24 08:58:56,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-07-24 08:58:56,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-24 08:58:57,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:58:57,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-07-24 08:58:57,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:58:57,913 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-24 08:58:58,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-07-24 08:58:58,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-07-24 08:58:59,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-07-24 08:58:59,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-24 08:59:00,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:00,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-07-24 08:59:01,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:01,339 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-07-24 08:59:01,339 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:59:01,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-24 08:59:01,340 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:01,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:01,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:59:01,349 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:59:01,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:59:01,354 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:59:01,359 [ scc.git] DEBUG Already up to date. 2024-07-24 08:59:01,359 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-07-24 08:59:01,855 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-24 08:59:01,855 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-07-24 08:59:01,859 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-07-24 08:59:02,547 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-24 08:59:02,547 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-07-24 08:59:02,550 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-07-24 08:59:03,070 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-07-24 08:59:03,070 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-07-24 08:59:03,073 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:59:03,073 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:03,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:03,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-24 08:59:03,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:03,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-24 08:59:03,192 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-24 08:59:03,193 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-24 08:59:03,193 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-24 08:59:03,193 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 08:59:03,193 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 08:59:03,198 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-24 08:59:03,203 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-24 08:59:03,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:03,420 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-07-24 08:59:03,426 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-24 08:59:03,430 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-07-24 08:59:03,434 [ scc.config] DEBUG Found github.token 2024-07-24 08:59:03,435 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-07-24 08:59:03,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-24 08:59:03,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:03,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-24 08:59:03,463 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-07-24 08:59:03,464 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-07-24 08:59:03,464 [ scc.git] DEBUG Auto-merging setup.py 2024-07-24 08:59:03,464 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-07-24 08:59:03,464 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-24 08:59:03,464 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-07-24 08:59:03,464 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-07-24 08:59:03,464 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 08:59:03,464 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 08:59:03,468 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-24 08:59:03,474 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-07-24 08:59:03,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:03,852 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-07-24 08:59:03,857 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-07-24 08:59:03,862 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-07-24 08:59:03,866 [ scc.config] DEBUG Found github.token 2024-07-24 08:59:03,866 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-07-24 08:59:03,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-24 08:59:03,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:03,876 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-07-24 08:59:03,887 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-07-24 08:59:03,888 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-07-24 08:59:03,888 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:03,890 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-07-24 08:59:03,891 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-07-24 08:59:03,891 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-07-24 08:59:03,891 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-07-24 08:59:03,891 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-07-24 08:59:03,891 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-07-24 08:59:04,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:04,290 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:59:04,327 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:04,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:04,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:59:04,366 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:59:04,371 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54b4280> has no local changes 2024-07-24 08:59:04,372 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:59:04,379 [ scc.git] DEBUG [detached HEAD e93301e] merge master -Dorg -Ssuccess-only 2024-07-24 08:59:04,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:59:04,379 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:59:04,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-07-24 08:59:05,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/581 HTTP/1.1" 200 None 2024-07-24 08:59:05,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/580 HTTP/1.1" 200 None 2024-07-24 08:59:06,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/580/comments HTTP/1.1" 200 None 2024-07-24 08:59:06,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-07-24 08:59:07,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-07-24 08:59:07,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-07-24 08:59:08,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-07-24 08:59:08,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-07-24 08:59:09,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576 HTTP/1.1" 200 None 2024-07-24 08:59:09,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/576/comments HTTP/1.1" 200 None 2024-07-24 08:59:09,701 [ scc.repo] DEBUG # ... Include label: include 2024-07-24 08:59:10,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-24 08:59:10,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:11,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:11,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/88901984c22249d20925e53c455cd822700be6d4 HTTP/1.1" 200 None 2024-07-24 08:59:12,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/88901984c22249d20925e53c455cd822700be6d4?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:12,160 [ scc.repo] DEBUG - PR 576 Rdornier 'Color picker - popup update' 2024-07-24 08:59:12,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-07-24 08:59:13,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-07-24 08:59:13,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-24 08:59:14,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:14,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:15,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-07-24 08:59:15,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:15,534 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-24 08:59:16,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-07-24 08:59:16,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-07-24 08:59:17,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-24 08:59:17,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:18,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:18,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c HTTP/1.1" 200 None 2024-07-24 08:59:19,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:19,066 [ scc.repo] DEBUG - PR 560 will-moore 'Max projection bytes' 2024-07-24 08:59:19,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-07-24 08:59:20,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-07-24 08:59:20,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-24 08:59:21,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:21,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:21,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-07-24 08:59:22,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:22,391 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-07-24 08:59:22,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-07-24 08:59:23,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-07-24 08:59:23,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-24 08:59:24,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:24,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:25,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f7d26b972bfe9a7105c4f94776748446f2395c77 HTTP/1.1" 200 None 2024-07-24 08:59:25,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f7d26b972bfe9a7105c4f94776748446f2395c77?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:25,658 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-07-24 08:59:25,658 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:59:25,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-24 08:59:25,658 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:25,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:25,663 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:59:25,668 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:59:25,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:59:25,673 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:59:25,678 [ scc.git] DEBUG Already up to date. 2024-07-24 08:59:25,679 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-07-24 08:59:26,257 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-24 08:59:26,257 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-07-24 08:59:26,262 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-07-24 08:59:27,011 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-24 08:59:27,012 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-07-24 08:59:27,016 [ scc.git] DEBUG Calling 'git fetch origin pull/560/head' 2024-07-24 08:59:29,888 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-24 08:59:29,889 [ scc.git] DEBUG * branch refs/pull/560/head -> FETCH_HEAD 2024-07-24 08:59:29,892 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-07-24 08:59:30,341 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-24 08:59:30,341 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-07-24 08:59:30,344 [ scc.git] DEBUG Calling 'git fetch origin pull/576/head' 2024-07-24 08:59:31,426 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-07-24 08:59:31,427 [ scc.git] DEBUG * branch refs/pull/576/head -> FETCH_HEAD 2024-07-24 08:59:31,431 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:59:31,431 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:31,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:31,436 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-24 08:59:31,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:31,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) f7d26b972bfe9a7105c4f94776748446f2395c77' 2024-07-24 08:59:31,460 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-24 08:59:31,461 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:31,466 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-07-24 08:59:31,466 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-07-24 08:59:31,466 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-07-24 08:59:31,466 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-07-24 08:59:31,467 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-07-24 08:59:31,467 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-07-24 08:59:31,467 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-07-24 08:59:31,467 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-07-24 08:59:31,467 [ scc.git] DEBUG src/templates/rois_form.template.html | 8 ++++ 2024-07-24 08:59:31,467 [ scc.git] DEBUG 9 files changed, 271 insertions(+), 5 deletions(-) 2024-07-24 08:59:31,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:31,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-24 08:59:31,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:31,647 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-07-24 08:59:32,247 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-24 08:59:32,248 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-24 08:59:32,248 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-07-24 08:59:32,248 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-07-24 08:59:32,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:32,253 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-07-24 08:59:32,254 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-07-24 08:59:32,254 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-07-24 08:59:32,255 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-07-24 08:59:32,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:32,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-24 08:59:32,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:32,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 560 (Max projection bytes) 3d9cfe3235c6041ddc6c16d5f803ab4e8f82c39c' 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-07-24 08:59:33,697 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-07-24 08:59:33,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:33,704 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 24 +++++++-- 2024-07-24 08:59:33,705 [ scc.git] DEBUG omero_figure/urls.py | 10 +++- 2024-07-24 08:59:33,705 [ scc.git] DEBUG omero_figure/views.py | 58 ++++++++++++++++++++++ 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/css/figure.css | 5 -- 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/index.html | 1 + 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/js/models/figure_model.js | 29 ++++++++++- 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/js/models/panel_model.js | 29 ++++++++++- 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/js/views/info_panel_view.js | 3 +- 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/js/views/modal_views.js | 2 + 2024-07-24 08:59:33,705 [ scc.git] DEBUG src/js/views/panel_view.js | 2 +- 2024-07-24 08:59:33,706 [ scc.git] DEBUG src/js/views/right_panel_view.js | 5 ++ 2024-07-24 08:59:33,706 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 3 +- 2024-07-24 08:59:33,706 [ scc.git] DEBUG src/templates/image_display_options.template.html | 4 +- 2024-07-24 08:59:33,706 [ scc.git] DEBUG src/templates/info_panel.template.html | 2 + 2024-07-24 08:59:33,707 [ scc.git] DEBUG 14 files changed, 162 insertions(+), 15 deletions(-) 2024-07-24 08:59:33,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:33,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-24 08:59:33,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:33,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-07-24 08:59:33,988 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:33,990 [ scc.git] DEBUG setup.py | 2 +- 2024-07-24 08:59:33,990 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-07-24 08:59:34,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:34,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...88901984c22249d20925e53c455cd822700be6d4' 2024-07-24 08:59:34,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:34,294 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 576 (Color picker - popup update) 88901984c22249d20925e53c455cd822700be6d4' 2024-07-24 08:59:34,605 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-07-24 08:59:34,605 [ scc.git] DEBUG Auto-merging src/index.html 2024-07-24 08:59:34,606 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:34,610 [ scc.git] DEBUG .gitignore | 2 +- 2024-07-24 08:59:34,610 [ scc.git] DEBUG src/css/figure.css | 3 +++ 2024-07-24 08:59:34,610 [ scc.git] DEBUG src/index.html | 3 +++ 2024-07-24 08:59:34,610 [ scc.git] DEBUG src/js/views/colorpicker.js | 10 ++++++++-- 2024-07-24 08:59:34,610 [ scc.git] DEBUG 4 files changed, 15 insertions(+), 3 deletions(-) 2024-07-24 08:59:34,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:34,768 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:59:34,803 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:34,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:34,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:59:34,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:59:34,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54c7490> has no local changes 2024-07-24 08:59:34,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 581 Rdornier 'Fix panel & label zoom value' (user: Rdornier) - PR 580 Rdornier 'Weird translation' (user: Rdornier) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 578 Rdornier 'Image outline' (user: Rdornier) - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:59:34,858 [ scc.git] DEBUG [detached HEAD 2f65af31] merge master -Dorg -Ssuccess-only 2024-07-24 08:59:34,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:59:34,859 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:59:35,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-07-24 08:59:35,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-07-24 08:59:36,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-07-24 08:59:36,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-24 08:59:37,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:37,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-07-24 08:59:38,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:38,350 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-07-24 08:59:38,350 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:59:38,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-24 08:59:38,350 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:38,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:38,355 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:59:38,359 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:59:38,360 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:59:38,364 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:59:38,369 [ scc.git] DEBUG Already up to date. 2024-07-24 08:59:38,369 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-07-24 08:59:38,823 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-07-24 08:59:38,823 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-07-24 08:59:38,826 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:59:38,826 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:38,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:38,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-24 08:59:38,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:38,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-07-24 08:59:39,167 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-07-24 08:59:39,167 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:39,169 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-07-24 08:59:39,169 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-07-24 08:59:39,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:39,325 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:59:39,360 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:39,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:39,364 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:59:39,398 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:59:39,403 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54e0a60> has no local changes 2024-07-24 08:59:39,403 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:59:39,411 [ scc.git] DEBUG [detached HEAD a05e922] merge master -Dorg -Ssuccess-only 2024-07-24 08:59:39,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:59:39,411 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:59:39,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-07-24 08:59:40,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-07-24 08:59:40,315 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 08:59:40,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-24 08:59:41,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:41,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:42,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-07-24 08:59:43,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:43,010 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-24 08:59:43,010 [ scc.repo] DEBUG ## Branches found: 2024-07-24 08:59:43,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-24 08:59:43,010 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:43,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:43,015 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 08:59:43,019 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 08:59:43,019 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 08:59:43,024 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 08:59:43,029 [ scc.git] DEBUG Already up to date. 2024-07-24 08:59:43,029 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-07-24 08:59:43,407 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-07-24 08:59:43,407 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-07-24 08:59:43,411 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 08:59:43,411 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:43,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:43,416 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-24 08:59:43,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:43,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-07-24 08:59:43,434 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 08:59:43,438 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-07-24 08:59:43,438 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-07-24 08:59:43,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 08:59:43,609 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 08:59:43,643 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 08:59:43,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 08:59:43,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 08:59:43,682 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 08:59:43,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54dbaf0> has no local changes 2024-07-24 08:59:43,689 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 08:59:43,697 [ scc.git] DEBUG [detached HEAD b5be6b1] merge master -Dorg -Ssuccess-only 2024-07-24 08:59:43,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 08:59:43,697 [ scc.repo] DEBUG ## PRs found: 2024-07-24 08:59:44,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-07-24 08:59:44,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-07-24 08:59:45,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-07-24 08:59:45,118 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 08:59:45,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-24 08:59:46,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:46,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:47,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-07-24 08:59:47,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:47,822 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-24 08:59:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-07-24 08:59:48,295 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 08:59:48,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-24 08:59:49,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:49,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:50,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-07-24 08:59:50,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:50,789 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-24 08:59:51,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-07-24 08:59:51,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-07-24 08:59:52,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-24 08:59:52,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:53,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:53,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-07-24 08:59:54,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:54,226 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-24 08:59:54,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-07-24 08:59:55,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-07-24 08:59:55,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-24 08:59:56,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 08:59:56,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 08:59:57,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-07-24 08:59:57,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-07-24 08:59:57,614 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-07-24 08:59:58,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-07-24 08:59:58,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-07-24 08:59:59,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-24 08:59:59,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:00,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-07-24 09:00:00,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:00,479 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-07-24 09:00:00,479 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:00,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-24 09:00:00,479 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:00,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:00,484 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:00,489 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:00,489 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:00,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:00,499 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:00,499 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-07-24 09:00:00,955 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-24 09:00:00,955 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-07-24 09:00:00,959 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-07-24 09:00:01,959 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-24 09:00:01,959 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-07-24 09:00:01,963 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-07-24 09:00:02,368 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-24 09:00:02,368 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-07-24 09:00:02,372 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-07-24 09:00:02,744 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-24 09:00:02,744 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-07-24 09:00:02,747 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-07-24 09:00:03,111 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-07-24 09:00:03,111 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-07-24 09:00:03,114 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:03,114 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:03,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:03,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-24 09:00:03,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:03,128 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-07-24 09:00:03,195 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-07-24 09:00:03,195 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:03,198 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-07-24 09:00:03,198 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-07-24 09:00:03,198 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-07-24 09:00:03,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:03,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-24 09:00:03,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:03,374 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-07-24 09:00:03,631 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-07-24 09:00:03,631 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-07-24 09:00:03,631 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-07-24 09:00:03,632 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-07-24 09:00:03,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:03,635 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-07-24 09:00:03,636 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-07-24 09:00:03,636 [ scc.git] DEBUG src/app/header.html | 5 + 2024-07-24 09:00:03,636 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-07-24 09:00:03,636 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-07-24 09:00:03,636 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-07-24 09:00:03,636 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-07-24 09:00:03,636 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-07-24 09:00:03,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:03,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-24 09:00:03,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:03,814 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-07-24 09:00:03,838 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-07-24 09:00:03,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:03,841 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-07-24 09:00:03,841 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-07-24 09:00:03,841 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-07-24 09:00:04,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:04,227 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-24 09:00:04,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:04,244 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-07-24 09:00:04,353 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:04,362 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-07-24 09:00:04,362 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-07-24 09:00:04,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:04,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-24 09:00:04,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:04,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-07-24 09:00:04,781 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-24 09:00:04,782 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:05,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:05,045 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:05,081 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:05,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:05,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:05,119 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:05,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba549d880> has no local changes 2024-07-24 09:00:05,128 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:05,135 [ scc.git] DEBUG [detached HEAD 6ea7e9c] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:05,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:05,136 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:05,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-07-24 09:00:06,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-07-24 09:00:06,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-07-24 09:00:07,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-24 09:00:07,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:08,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 09:00:08,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-07-24 09:00:09,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:09,200 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-07-24 09:00:09,200 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:09,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-24 09:00:09,200 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:09,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:09,205 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:09,209 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:09,209 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:09,214 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:09,219 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:09,219 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-07-24 09:00:09,571 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-07-24 09:00:09,571 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-07-24 09:00:09,574 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:09,574 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:09,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:09,579 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-24 09:00:09,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:09,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-07-24 09:00:09,597 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:09,600 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-07-24 09:00:09,600 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-07-24 09:00:09,600 [ scc.git] DEBUG requirements.txt | 2 +- 2024-07-24 09:00:09,600 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-07-24 09:00:09,600 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-07-24 09:00:09,600 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-07-24 09:00:09,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:09,769 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:09,803 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:09,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:09,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:09,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:09,848 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba54c0df0> has no local changes 2024-07-24 09:00:09,848 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:09,855 [ scc.git] DEBUG [detached HEAD 358714f] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:09,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:09,856 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:10,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-07-24 09:00:10,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-07-24 09:00:11,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-07-24 09:00:11,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-24 09:00:12,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:12,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-07-24 09:00:13,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:13,293 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-24 09:00:13,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-07-24 09:00:14,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-07-24 09:00:14,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-24 09:00:15,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:15,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-07-24 09:00:16,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:16,226 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-24 09:00:16,226 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:16,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-24 09:00:16,226 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:16,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:16,232 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:16,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:16,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:16,241 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:16,246 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:16,246 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-07-24 09:00:16,852 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-24 09:00:16,852 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-07-24 09:00:16,856 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-07-24 09:00:17,309 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-07-24 09:00:17,309 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-07-24 09:00:17,313 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:17,313 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:17,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:17,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-24 09:00:17,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:17,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-24 09:00:17,394 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-07-24 09:00:17,394 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-07-24 09:00:17,394 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-24 09:00:17,394 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-24 09:00:17,394 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:00:17,395 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:00:17,400 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-24 09:00:17,405 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-24 09:00:17,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:17,603 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-07-24 09:00:17,609 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-24 09:00:17,614 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-07-24 09:00:17,618 [ scc.config] DEBUG Found github.token 2024-07-24 09:00:17,618 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-07-24 09:00:17,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-24 09:00:17,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:17,629 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-24 09:00:17,646 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-07-24 09:00:17,646 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-07-24 09:00:17,646 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-07-24 09:00:17,646 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:00:17,646 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:00:17,651 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-24 09:00:17,658 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-07-24 09:00:18,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:18,018 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-07-24 09:00:18,024 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-07-24 09:00:18,029 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-07-24 09:00:18,033 [ scc.config] DEBUG Found github.token 2024-07-24 09:00:18,033 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-07-24 09:00:18,034 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:18,069 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:18,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:18,073 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:18,109 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:18,115 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba4475f10> has no local changes 2024-07-24 09:00:18,116 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:18,123 [ scc.git] DEBUG [detached HEAD 7281b0f] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:18,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:18,123 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:18,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-07-24 09:00:19,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-07-24 09:00:19,112 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 09:00:19,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-24 09:00:20,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:20,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 09:00:21,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-07-24 09:00:21,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:21,860 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-24 09:00:22,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-07-24 09:00:22,402 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 09:00:22,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-24 09:00:23,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:24,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 09:00:24,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-07-24 09:00:25,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:25,033 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-24 09:00:25,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-07-24 09:00:25,530 [ scc.repo] DEBUG # ... Include label: dependencies 2024-07-24 09:00:26,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-24 09:00:26,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:27,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 09:00:27,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-07-24 09:00:28,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:28,167 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-24 09:00:28,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-07-24 09:00:29,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-07-24 09:00:29,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-07-24 09:00:30,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-07-24 09:00:30,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-07-24 09:00:31,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-07-24 09:00:31,144 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:31,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-24 09:00:31,144 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:31,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:31,149 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:31,155 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:31,155 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:31,160 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:31,165 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:31,165 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-07-24 09:00:31,559 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-24 09:00:31,559 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-07-24 09:00:31,563 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-07-24 09:00:31,914 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-24 09:00:31,914 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-07-24 09:00:31,917 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-07-24 09:00:32,253 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-07-24 09:00:32,253 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-07-24 09:00:32,257 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:32,257 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:32,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:32,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-24 09:00:32,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:32,271 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-07-24 09:00:32,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:32,282 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-07-24 09:00:32,282 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-07-24 09:00:32,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:32,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-24 09:00:32,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:32,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-07-24 09:00:32,494 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-24 09:00:32,495 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:32,497 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-07-24 09:00:32,497 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-07-24 09:00:32,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:32,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-24 09:00:32,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:32,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-07-24 09:00:32,909 [ scc.git] DEBUG Auto-merging package-lock.json 2024-07-24 09:00:32,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:32,913 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-07-24 09:00:32,913 [ scc.git] DEBUG package.json | 2 +- 2024-07-24 09:00:32,913 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-07-24 09:00:33,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:33,295 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:33,330 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:33,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:33,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:33,369 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:33,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba44134f0> has no local changes 2024-07-24 09:00:33,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:33,382 [ scc.git] DEBUG [detached HEAD df4ff60] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:33,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:33,383 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:33,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-07-24 09:00:34,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-07-24 09:00:34,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-24 09:00:35,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:35,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-07-24 09:00:36,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:36,274 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-07-24 09:00:36,274 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:36,274 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-24 09:00:36,275 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:36,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:36,279 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:36,284 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:36,284 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:36,289 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:36,294 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:36,294 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-24 09:00:36,696 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-07-24 09:00:36,696 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-24 09:00:36,699 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:36,699 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:36,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:36,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-24 09:00:36,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:36,713 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-07-24 09:00:36,721 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:36,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:36,881 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:36,916 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:36,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:36,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:36,955 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:36,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba446ef40> has no local changes 2024-07-24 09:00:36,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:36,968 [ scc.git] DEBUG [detached HEAD 8fcc193] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:36,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:36,968 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:37,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-07-24 09:00:37,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-07-24 09:00:38,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-07-24 09:00:38,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-07-24 09:00:39,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-24 09:00:39,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:40,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-07-24 09:00:40,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:40,778 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-24 09:00:40,778 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:40,779 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-24 09:00:40,779 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:40,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:40,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:40,788 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:40,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:40,793 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:40,798 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:40,798 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-07-24 09:00:41,204 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-07-24 09:00:41,204 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-07-24 09:00:41,208 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:41,208 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:41,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:41,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-24 09:00:41,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:41,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-07-24 09:00:41,230 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-07-24 09:00:41,231 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:41,233 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-07-24 09:00:41,233 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-07-24 09:00:41,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:41,421 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:41,455 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:41,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:41,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:41,494 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:41,500 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba4448bb0> has no local changes 2024-07-24 09:00:41,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:41,507 [ scc.git] DEBUG [detached HEAD a3a5d57] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:41,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:41,508 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:41,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-07-24 09:00:42,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-07-24 09:00:42,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-07-24 09:00:43,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-24 09:00:43,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:44,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-07-24 09:00:44,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:44,748 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-24 09:00:44,748 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:44,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-24 09:00:44,749 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:44,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:44,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:44,758 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:44,758 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:44,762 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:44,767 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:44,767 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-07-24 09:00:45,151 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-07-24 09:00:45,151 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-07-24 09:00:45,154 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:45,154 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:45,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:45,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-24 09:00:45,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:45,168 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-24 09:00:45,294 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG Auto-merging setup.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-07-24 09:00:45,294 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:00:45,294 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:00:45,299 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-24 09:00:45,305 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-07-24 09:00:45,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:45,458 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-07-24 09:00:45,463 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-07-24 09:00:45,467 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2024-07-24 09:00:45,471 [ scc.config] DEBUG Found github.token 2024-07-24 09:00:45,472 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-07-24 09:00:45,472 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:45,507 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:45,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:45,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:45,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:45,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba4438700> has no local changes 2024-07-24 09:00:45,551 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:45,558 [ scc.git] DEBUG [detached HEAD 7e551ca] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:45,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:45,559 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:46,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-07-24 09:00:46,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-07-24 09:00:46,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-07-24 09:00:47,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-24 09:00:47,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:48,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-07-24 09:00:48,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:48,982 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-24 09:00:48,982 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:48,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-24 09:00:48,982 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:48,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:48,987 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:48,991 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:48,991 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:48,996 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:49,001 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:49,001 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-07-24 09:00:49,409 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-07-24 09:00:49,409 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-07-24 09:00:49,413 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:49,413 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:49,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:49,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-07-24 09:00:49,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:49,428 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-07-24 09:00:49,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-07-24 09:00:49,446 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-07-24 09:00:49,447 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-07-24 09:00:49,448 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-07-24 09:00:49,448 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-07-24 09:00:49,448 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-07-24 09:00:49,448 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-07-24 09:00:49,448 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-07-24 09:00:49,449 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-07-24 09:00:49,449 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-07-24 09:00:49,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:49,624 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:49,659 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:49,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:49,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:49,698 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:49,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba4402610> has no local changes 2024-07-24 09:00:49,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:49,712 [ scc.git] DEBUG [detached HEAD fb193f2] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:49,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:49,712 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:50,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-07-24 09:00:50,074 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:50,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-24 09:00:50,074 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,078 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:50,083 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:50,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:50,088 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:50,092 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:50,092 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:50,092 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:50,132 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,136 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:50,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:50,175 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba439ffd0> has no local changes 2024-07-24 09:00:50,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:50,183 [ scc.git] DEBUG [detached HEAD 77c5438] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:50,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:50,183 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:50,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-07-24 09:00:50,513 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:50,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-24 09:00:50,513 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,517 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:50,521 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:50,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:50,526 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:50,531 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:50,531 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:50,531 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,535 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:50,570 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:50,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:50,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:50,609 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:50,614 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba43d8d00> has no local changes 2024-07-24 09:00:50,614 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:50,621 [ scc.git] DEBUG [detached HEAD 1529230] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:50,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:50,622 [ scc.git] INFO Overriding base-branch from master to main 2024-07-24 09:00:50,622 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:51,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-07-24 09:00:51,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-07-24 09:00:52,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-07-24 09:00:52,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-07-24 09:00:53,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-24 09:00:53,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-07-24 09:00:54,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-07-24 09:00:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:00:54,968 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-24 09:00:54,968 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:54,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-24 09:00:54,968 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:54,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:54,974 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-07-24 09:00:54,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:54,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-07-24 09:00:54,983 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-07-24 09:00:54,988 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:54,988 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-07-24 09:00:55,375 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-07-24 09:00:55,375 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-07-24 09:00:55,378 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:55,378 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:55,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:55,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-24 09:00:55,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:55,393 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-24 09:00:55,494 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-07-24 09:00:55,494 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-07-24 09:00:55,494 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:00:55,494 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:00:55,499 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-24 09:00:55,505 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-07-24 09:00:55,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:00:55,670 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-07-24 09:00:55,675 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-07-24 09:00:55,680 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-07-24 09:00:55,684 [ scc.config] DEBUG Found github.token 2024-07-24 09:00:55,684 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-07-24 09:00:55,685 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:55,721 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:55,721 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:55,725 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:55,761 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:55,766 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba43e9f40> has no local changes 2024-07-24 09:00:55,766 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:55,774 [ scc.git] DEBUG [detached HEAD 76a3140] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:55,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:55,774 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:56,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-07-24 09:00:56,148 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:56,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-24 09:00:56,148 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,153 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:56,157 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:56,157 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:56,162 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:56,167 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:56,167 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:56,167 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,171 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:56,207 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,211 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:56,246 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:56,251 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba43e5700> has no local changes 2024-07-24 09:00:56,251 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:56,258 [ scc.git] DEBUG [detached HEAD c69c4ef] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:56,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:56,258 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-07-24 09:00:56,604 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:00:56,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-24 09:00:56,605 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:00:56,614 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:00:56,614 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:00:56,619 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:00:56,624 [ scc.git] DEBUG Already up to date. 2024-07-24 09:00:56,624 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:00:56,624 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,628 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:00:56,664 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:00:56,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:00:56,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:00:56,703 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:00:56,708 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba43c64f0> has no local changes 2024-07-24 09:00:56,708 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:00:56,716 [ scc.git] DEBUG [detached HEAD 7a1cab0] merge master -Dorg -Ssuccess-only 2024-07-24 09:00:56,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:00:56,716 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:00:57,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-07-24 09:00:57,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-07-24 09:00:58,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-07-24 09:00:58,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-24 09:00:59,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:00:59,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-07-24 09:01:00,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:01:00,034 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-07-24 09:01:00,034 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:01:00,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-24 09:01:00,034 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:00,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:00,040 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-07-24 09:01:00,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:01:00,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-07-24 09:01:00,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-07-24 09:01:00,054 [ scc.git] DEBUG Already up to date. 2024-07-24 09:01:00,054 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-07-24 09:01:00,446 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-07-24 09:01:00,446 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-07-24 09:01:00,450 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:01:00,450 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:00,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:00,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-24 09:01:00,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:00,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-24 09:01:00,597 [ scc.git] DEBUG Auto-merging Dockerfile 2024-07-24 09:01:00,597 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-07-24 09:01:00,597 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:01:00,597 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:01:00,603 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-24 09:01:00,609 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-07-24 09:01:00,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:00,785 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-07-24 09:01:00,790 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-07-24 09:01:00,795 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-07-24 09:01:00,799 [ scc.config] DEBUG Found github.token 2024-07-24 09:01:00,799 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-07-24 09:01:00,799 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:01:00,836 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:00,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:00,840 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:01:00,875 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:01:00,881 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba43688b0> has no local changes 2024-07-24 09:01:00,881 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:01:00,889 [ scc.git] DEBUG [detached HEAD 32bc0e9] merge master -Dorg -Ssuccess-only 2024-07-24 09:01:00,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:00,890 [ scc.git] INFO Overriding base-branch from master to develop 2024-07-24 09:01:00,890 [ scc.repo] DEBUG ## PRs found: 2024-07-24 09:01:01,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-07-24 09:01:01,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-07-24 09:01:02,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-07-24 09:01:03,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-07-24 09:01:03,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-07-24 09:01:04,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-07-24 09:01:04,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-07-24 09:01:05,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-24 09:01:05,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-07-24 09:01:05,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-07-24 09:01:06,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-07-24 09:01:06,366 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-24 09:01:06,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-07-24 09:01:07,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-07-24 09:01:07,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-07-24 09:01:08,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-07-24 09:01:08,420 [ scc.repo] DEBUG ## Branches found: 2024-07-24 09:01:08,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-24 09:01:08,420 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:08,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:08,426 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-07-24 09:01:08,430 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-07-24 09:01:08,431 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-07-24 09:01:08,435 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-07-24 09:01:08,440 [ scc.git] DEBUG Already up to date. 2024-07-24 09:01:08,441 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-07-24 09:01:09,056 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-07-24 09:01:09,056 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-07-24 09:01:09,060 [ scc.git] DEBUG ## Unique users: [] 2024-07-24 09:01:09,060 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:09,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:09,065 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-24 09:01:09,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:09,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-24 09:01:09,178 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-07-24 09:01:09,178 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-07-24 09:01:09,178 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-07-24 09:01:09,179 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-07-24 09:01:09,183 [ scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-24 09:01:09,189 [ scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking 2024-07-24 09:01:09,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:09,361 [ scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-07-24 09:01:09,368 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636' 2024-07-24 09:01:09,373 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#133](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-07-24 09:01:09,377 [ scc.config] DEBUG Found github.token 2024-07-24 09:01:09,378 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-07-24 09:01:09,378 [ scc.git] DEBUG Calling 'git submodule update' 2024-07-24 09:01:09,413 [ scc.git] DEBUG Get sha1 of %s 2024-07-24 09:01:09,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-07-24 09:01:09,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:01:09,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:01:09,457 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba4368580> has no local changes 2024-07-24 09:01:09,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:01:09,465 [ scc.git] DEBUG [detached HEAD b8d8127] merge master -Dorg -Ssuccess-only 2024-07-24 09:01:09,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:09,465 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-07-24 09:01:09,533 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-07-24 09:01:09,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:09,806 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-07-24 09:01:09,810 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-07-24 09:01:10,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:10,208 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-07-24 09:01:10,212 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-07-24 09:01:10,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:10,613 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-07-24 09:01:10,617 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-07-24 09:01:11,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:11,072 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-07-24 09:01:11,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:11,466 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-07-24 09:01:11,470 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-07-24 09:01:11,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:11,885 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-07-24 09:01:11,889 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-07-24 09:01:12,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:12,284 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-07-24 09:01:12,289 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-07-24 09:01:12,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:12,708 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-07-24 09:01:12,713 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-07-24 09:01:13,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:13,121 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-07-24 09:01:13,125 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-07-24 09:01:13,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:13,536 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-07-24 09:01:13,540 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-07-24 09:01:13,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:13,949 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-07-24 09:01:13,953 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-07-24 09:01:14,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:14,355 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-07-24 09:01:14,359 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-07-24 09:01:14,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:14,785 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-07-24 09:01:15,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:15,191 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-07-24 09:01:15,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:15,613 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-07-24 09:01:15,617 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-07-24 09:01:16,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:16,051 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-07-24 09:01:16,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:16,472 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-07-24 09:01:16,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:16,889 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-07-24 09:01:16,893 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-07-24 09:01:17,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:17,332 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-07-24 09:01:17,336 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-07-24 09:01:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:17,752 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-07-24 09:01:17,756 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-07-24 09:01:18,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:18,170 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-07-24 09:01:18,174 [ scc.config] DEBUG Found submodule.scripts.url 2024-07-24 09:01:18,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-07-24 09:01:18,598 [ scc.config] DEBUG Found submodule.scripts.branch 2024-07-24 09:01:18,598 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-07-24 09:01:18,671 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7ba89cc460> has local changes 2024-07-24 09:01:18,671 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 581 Rdornier 'Fix panel & label zoom value' (user: Rdornier) - PR 580 Rdornier 'Weird translation' (user: Rdornier) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 578 Rdornier 'Image outline' (user: Rdornier) - PR 577 Rdornier 'Fill rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 560 will-moore 'Max projection bytes' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 576 Rdornier 'Color picker - popup update' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#133 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/133/)' 2024-07-24 09:01:18,683 [ scc.git] DEBUG [detached HEAD d41ff6b] merge master -Dorg -Ssuccess-only 2024-07-24 09:01:18,684 [ scc.merge] INFO Repository: ome/omero-plugins 2024-07-24 09:01:18,684 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-07-24 09:01:18,684 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-07-24 09:01:18,684 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-07-24 09:01:18,684 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-07-24 09:01:18,684 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-07-24 09:01:18,684 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-07-24 09:01:18,684 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,684 [ scc.merge] INFO 2024-07-24 09:01:18,684 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-07-24 09:01:18,684 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-07-24 09:01:18,685 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-07-24 09:01:18,685 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Repository: ome/omero-figure 2024-07-24 09:01:18,685 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 581 Rdornier 'Fix panel & label zoom value' (user: Rdornier) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 580 Rdornier 'Weird translation' (user: Rdornier) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' (user: Rdornier) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' (user: Rdornier) 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-07-24 09:01:18,685 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 576 Rdornier 'Color picker - popup update' 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-07-24 09:01:18,685 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,685 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,685 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-07-24 09:01:18,685 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Repository: ome/omero-gallery 2024-07-24 09:01:18,686 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-07-24 09:01:18,686 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-07-24 09:01:18,686 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Repository: ome/omero-mapr 2024-07-24 09:01:18,686 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-07-24 09:01:18,686 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Repository: ome/omero-metadata 2024-07-24 09:01:18,686 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-07-24 09:01:18,686 [ scc.merge] INFO 2024-07-24 09:01:18,686 [ scc.merge] INFO Repository: ome/omero-parade 2024-07-24 09:01:18,686 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-07-24 09:01:18,686 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Repository: ome/omero-rois 2024-07-24 09:01:18,687 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Repository: ome/omero-signup 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Merged PRs: 2024-07-24 09:01:18,687 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO Repository: ome/omero-upload 2024-07-24 09:01:18,687 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,687 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-07-24 09:01:18,688 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Repository: ome/scripts 2024-07-24 09:01:18,688 [ scc.merge] INFO Excluded PRs: 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-07-24 09:01:18,688 [ scc.merge] INFO Already up to date. 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,688 [ scc.merge] INFO Conflicting PRs (not included): 2024-07-24 09:01:18,688 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-07-24 09:01:18,688 [ scc.merge] INFO 2024-07-24 09:01:18,689 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-07-24 09:01:18,689 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-07-24 09:01:18,693 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-07-24 09:01:18,698 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-07-24 09:01:18,702 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-07-24 09:01:18,706 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-07-24 09:01:18,711 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-07-24 09:01:18,715 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-07-24 09:01:18,720 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-07-24 09:01:18,724 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-07-24 09:01:18,729 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-07-24 09:01:18,733 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-07-24 09:01:18,738 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-07-24 09:01:18,742 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-07-24 09:01:18,747 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-07-24 09:01:18,751 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-07-24 09:01:18,756 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-07-24 09:01:18,760 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-07-24 09:01:18,765 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-07-24 09:01:18,769 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-07-24 09:01:18,773 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-07-24 09:01:18,778 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-07-24 09:01:18,782 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-07-24 09:01:18,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-07-24 09:01:18,787 [ scc.git] DEBUG Calling 'git remote' 2024-07-24 09:01:18,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD be0d9ab] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fefe87cf nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from c20d273 nothing to commit, working tree clean [detached HEAD cb49588] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-07-24 09:02:06,954 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-07-24 09:02:16,255 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-07-24 09:02:18,702 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-24 09:02:23,429 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-07-24 09:03:11,682 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS