Started by upstream project "Trigger" build number 203 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 179 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.12.1-py3-none-any.whl.metadata (4.1 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.15-py3-none-any.whl.metadata (7.7 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.4.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.12.1-py3-none-any.whl (29 kB) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB) Using cached idna-3.15-py3-none-any.whl (72 kB) Using cached certifi-2026.4.22-py3-none-any.whl (135 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.4.22 cffi-2.0.0 charset_normalizer-3.4.7 cryptography-48.0.0 future-1.0.0 idna-3.15 pycparser-3.0 pyjwt-2.12.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-05-17 00:36:35,796 [ scc.config] DEBUG Found github.token 2026-05-17 00:36:35,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-17 00:36:36,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:36,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:37,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-17 00:36:37,053 [ scc.gh] DEBUG 4844 remaining from 5000 (Reset at 01:05 2026-05-17 00:36:37,054 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:36:37,056 [ scc.git] DEBUG Check current status 2026-05-17 00:36:37,056 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:36:37,059 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-17 00:36:37,059 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:36:37,105 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-17 00:36:37,108 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-17 00:36:37,111 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-17 00:36:37,114 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-17 00:36:37,119 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-17 00:36:37,122 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-17 00:36:37,124 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-17 00:36:37,128 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-17 00:36:37,130 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-17 00:36:37,133 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-17 00:36:37,136 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-17 00:36:37,139 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-17 00:36:37,142 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-17 00:36:37,145 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-17 00:36:37,148 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-17 00:36:37,150 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-17 00:36:37,153 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-17 00:36:37,155 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-17 00:36:37,158 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-17 00:36:37,161 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-17 00:36:37,164 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-17 00:36:37,167 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-17 00:36:37,169 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:36:37,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-17 00:36:38,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:36:38,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:36:38,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:36:39,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:36:39,420 [ scc.git] DEBUG Resetting... 2026-05-17 00:36:39,420 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-17 00:36:39,427 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-17 00:36:39,428 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-17 00:36:39,526 [ scc.git] DEBUG Check current status 2026-05-17 00:36:39,526 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:36:39,528 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-17 00:36:39,528 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:36:39,573 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-17 00:36:39,575 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-17 00:36:39,578 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-17 00:36:39,581 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-17 00:36:39,586 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-17 00:36:39,588 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-17 00:36:39,591 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-17 00:36:39,594 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-17 00:36:39,597 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-17 00:36:39,600 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-17 00:36:39,602 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-17 00:36:39,605 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-17 00:36:39,608 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-17 00:36:39,611 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-17 00:36:39,614 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-17 00:36:39,617 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-17 00:36:39,619 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-17 00:36:39,621 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-17 00:36:39,624 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-17 00:36:39,627 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-17 00:36:39,629 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-17 00:36:39,632 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-17 00:36:39,633 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-17 00:36:39,633 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-17 00:36:39,633 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-17 00:36:39,633 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-17 00:36:39,633 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-17 00:36:39,633 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:36:39,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-17 00:36:40,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-17 00:36:40,451 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:36:40,451 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-17 00:36:40,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-17 00:36:40,922 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:36:40,922 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-17 00:36:41,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-17 00:36:41,410 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:36:41,410 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-17 00:36:41,410 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:36:41,410 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:36:41,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:41,413 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:36:41,415 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:36:41,415 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:36:41,417 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:36:41,420 [ scc.git] DEBUG Already up to date. 2026-05-17 00:36:41,420 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-17 00:36:41,782 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:36:41,782 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-17 00:36:41,786 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-17 00:36:42,110 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:36:42,110 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-17 00:36:42,114 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-17 00:36:42,420 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:36:42,420 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-17 00:36:42,424 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:36:42,424 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:36:42,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:42,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-17 00:36:42,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:42,431 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-17 00:36:42,445 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:36:42,448 [ scc.git] DEBUG scripts | 2 +- 2026-05-17 00:36:42,448 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:36:42,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:42,634 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-17 00:36:42,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:42,638 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-17 00:36:42,652 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:36:42,655 [ scc.git] DEBUG omero-figure | 2 +- 2026-05-17 00:36:42,655 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:36:43,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:43,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-17 00:36:43,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:43,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-17 00:36:43,090 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:36:43,093 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-05-17 00:36:43,093 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:36:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:43,503 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:36:43,569 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-17 00:36:43,595 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-17 00:36:43,608 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-17 00:36:43,609 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:36:43,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:36:43,611 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:36:43,685 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f98354599d0> has no local changes 2026-05-17 00:36:43,685 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:36:43,753 [ scc.git] DEBUG [detached HEAD a89fa3e] merge master -Dorg -Snone 2026-05-17 00:36:43,754 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-17 00:36:43,754 [ scc.merge] INFO Already up to date. 2026-05-17 00:36:43,754 [ scc.merge] INFO 2026-05-17 00:36:43,754 [ scc.merge] INFO Merged PRs: 2026-05-17 00:36:43,754 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-17 00:36:43,754 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-17 00:36:43,754 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-17 00:36:43,754 [ scc.merge] INFO 2026-05-17 00:36:43,754 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-17 00:36:43,754 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '6ffb01dc7cfbdeec4b8a8ecf5beb46361a32b9fc' Submodule path 'omero-iviewer': checked out '0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-05-17 00:36:52,154 [ scc.config] DEBUG Found github.token 2026-05-17 00:36:52,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-17 00:36:52,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:52,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:36:53,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-17 00:36:53,228 [ scc.gh] DEBUG 4840 remaining from 5000 (Reset at 01:05 2026-05-17 00:36:53,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:36:53,230 [ scc.git] DEBUG Check current status 2026-05-17 00:36:53,230 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:36:53,233 [ scc.git] DEBUG a89fa3e merge master -Dorg -Snone 2026-05-17 00:36:53,233 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:36:53,278 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-17 00:36:53,280 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-17 00:36:53,283 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-05-17 00:36:53,286 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-05-17 00:36:53,291 [ scc.git] DEBUG +6ffb01dc7cfbdeec4b8a8ecf5beb46361a32b9fc omero-figure (v8.0.1.rc2-2-g6ffb01dc) 2026-05-17 00:36:53,294 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-17 00:36:53,297 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-17 00:36:53,301 [ scc.git] DEBUG +0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4 omero-iviewer (v0.16.0-63-g0b7eaf7) 2026-05-17 00:36:53,304 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-17 00:36:53,307 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-05-17 00:36:53,310 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-17 00:36:53,312 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-17 00:36:53,315 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-05-17 00:36:53,317 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-17 00:36:53,321 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-05-17 00:36:53,323 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-17 00:36:53,326 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-05-17 00:36:53,328 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-05-17 00:36:53,331 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-17 00:36:53,333 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-17 00:36:53,336 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-17 00:36:53,340 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-05-17 00:36:53,342 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:36:53,342 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-05-17 00:36:53,344 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-05-17 00:36:53,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-17 00:36:54,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:36:54,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:36:55,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:36:55,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:36:55,573 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:36:55,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-17 00:36:55,642 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:36:55,644 [ scc.git] DEBUG Check current status 2026-05-17 00:36:55,644 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:36:55,646 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-05-17 00:36:55,646 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:36:55,684 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:36:56,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-05-17 00:36:56,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:36:57,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:36:57,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:36:57,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:36:57,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:36:57,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:36:57,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-17 00:36:57,961 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:36:57,963 [ scc.git] DEBUG Check current status 2026-05-17 00:36:57,963 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:36:57,965 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-05-17 00:36:57,965 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:36:58,004 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:36:58,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-05-17 00:36:59,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:36:59,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:36:59,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:00,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:00,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:00,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:00,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-17 00:37:00,445 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:00,447 [ scc.git] DEBUG Check current status 2026-05-17 00:37:00,447 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:00,449 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-05-17 00:37:00,450 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:00,487 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:00,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-05-17 00:37:01,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:01,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:02,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:02,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:02,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:02,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:02,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-17 00:37:02,806 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:02,808 [ scc.git] DEBUG Check current status 2026-05-17 00:37:02,808 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:02,810 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-17 00:37:02,811 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:02,849 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:03,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-05-17 00:37:03,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:04,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:04,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:05,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:05,126 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:05,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:05,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-17 00:37:05,163 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:05,165 [ scc.git] DEBUG Check current status 2026-05-17 00:37:05,165 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:05,168 [ scc.git] DEBUG 6ffb01dc Merge pull request #688 from will-moore/handle_app_images_param 2026-05-17 00:37:05,168 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:05,206 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:05,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-05-17 00:37:06,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:06,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:07,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:07,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:07,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:07,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:07,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-17 00:37:07,539 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:07,541 [ scc.git] DEBUG Check current status 2026-05-17 00:37:07,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:07,543 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-05-17 00:37:07,543 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:07,580 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-05-17 00:37:08,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:08,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:09,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:09,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:09,868 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:09,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:09,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-17 00:37:09,905 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:09,907 [ scc.git] DEBUG Check current status 2026-05-17 00:37:09,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:09,910 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-05-17 00:37:09,910 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:09,948 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:10,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-05-17 00:37:11,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:11,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:11,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:12,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:12,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:12,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:12,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-17 00:37:12,427 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:12,428 [ scc.git] DEBUG Check current status 2026-05-17 00:37:12,429 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:12,431 [ scc.git] DEBUG 0b7eaf7 Merge pull request #526 from will-moore/keyboard_panning 2026-05-17 00:37:12,431 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:12,468 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:12,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-05-17 00:37:13,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:13,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:14,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:14,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:14,761 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:14,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:14,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-17 00:37:14,799 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:14,801 [ scc.git] DEBUG Check current status 2026-05-17 00:37:14,801 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:14,803 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-05-17 00:37:14,803 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:14,842 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:15,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-05-17 00:37:15,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:16,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:16,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:17,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:17,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:17,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:17,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-17 00:37:17,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:17,240 [ scc.git] DEBUG Check current status 2026-05-17 00:37:17,240 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:17,242 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-17 00:37:17,243 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:17,281 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:17,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-05-17 00:37:18,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:18,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:19,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:19,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:19,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:19,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:19,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-17 00:37:19,683 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:19,685 [ scc.git] DEBUG Check current status 2026-05-17 00:37:19,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:19,687 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-05-17 00:37:19,687 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:19,725 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:20,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-05-17 00:37:20,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:21,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:21,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:22,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:22,072 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:22,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:22,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-17 00:37:22,109 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:22,111 [ scc.git] DEBUG Check current status 2026-05-17 00:37:22,111 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:22,114 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-05-17 00:37:22,114 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:22,153 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:22,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-05-17 00:37:23,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:23,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:24,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:24,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:24,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:24,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:24,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-17 00:37:24,497 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:24,499 [ scc.git] DEBUG Check current status 2026-05-17 00:37:24,499 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:24,501 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-05-17 00:37:24,501 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:24,539 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:24,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-05-17 00:37:25,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:25,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:26,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:26,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:26,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:26,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:26,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-17 00:37:26,874 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:26,876 [ scc.git] DEBUG Check current status 2026-05-17 00:37:26,876 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:26,878 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-05-17 00:37:26,878 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:26,917 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:27,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-05-17 00:37:27,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:28,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:28,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:29,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:29,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:29,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:29,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-17 00:37:29,242 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:29,244 [ scc.git] DEBUG Check current status 2026-05-17 00:37:29,244 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:29,246 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-05-17 00:37:29,246 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:29,283 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:29,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-17 00:37:29,624 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-17 00:37:29,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-05-17 00:37:30,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:31,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:31,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:31,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:31,810 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:31,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-17 00:37:31,811 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:31,813 [ scc.git] DEBUG Check current status 2026-05-17 00:37:31,813 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:31,815 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-05-17 00:37:31,815 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:31,853 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:32,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-05-17 00:37:32,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:33,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:33,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:34,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:34,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:34,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:34,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-17 00:37:34,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:34,310 [ scc.git] DEBUG Check current status 2026-05-17 00:37:34,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:34,313 [ scc.git] DEBUG 160d894 Fix display of code 2026-05-17 00:37:34,313 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:34,351 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:34,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-05-17 00:37:35,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:35,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:36,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:36,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:36,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:36,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:36,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-17 00:37:36,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:36,837 [ scc.git] DEBUG Check current status 2026-05-17 00:37:36,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:36,840 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-17 00:37:36,840 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:36,878 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:36,878 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-05-17 00:37:37,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-05-17 00:37:37,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:38,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:38,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:39,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:39,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:39,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:39,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-17 00:37:39,195 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:39,197 [ scc.git] DEBUG Check current status 2026-05-17 00:37:39,197 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:39,200 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-05-17 00:37:39,200 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:39,237 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:39,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-17 00:37:39,576 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-17 00:37:39,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-05-17 00:37:40,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:40,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:41,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:41,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:41,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:41,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:41,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-17 00:37:41,951 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:41,953 [ scc.git] DEBUG Check current status 2026-05-17 00:37:41,953 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:41,956 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-05-17 00:37:41,956 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:41,994 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:42,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-17 00:37:42,325 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-17 00:37:42,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-05-17 00:37:43,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:43,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:44,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:44,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:44,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:44,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:44,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-17 00:37:44,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:44,509 [ scc.git] DEBUG Check current status 2026-05-17 00:37:44,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:44,511 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-05-17 00:37:44,511 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:44,549 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:44,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-05-17 00:37:45,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:45,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:46,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:46,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:46,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:46,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:46,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-17 00:37:46,851 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-17 00:37:46,852 [ scc.git] DEBUG Check current status 2026-05-17 00:37:46,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:46,855 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-05-17 00:37:46,855 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:46,892 [ scc.config] DEBUG Found remote.origin.url 2026-05-17 00:37:46,892 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-05-17 00:37:47,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-17 00:37:47,233 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-17 00:37:47,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-05-17 00:37:47,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-17 00:37:48,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-17 00:37:48,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-17 00:37:49,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-17 00:37:49,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:37:49,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:37:49,386 [ scc.git] DEBUG Resetting... 2026-05-17 00:37:49,386 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-17 00:37:49,394 [ scc.git] DEBUG HEAD is now at a89fa3e merge master -Dorg -Snone 2026-05-17 00:37:49,394 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-17 00:37:49,444 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-05-17 00:37:49,460 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-05-17 00:37:49,509 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-17 00:37:49,543 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-17 00:37:49,557 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-05-17 00:37:49,575 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-05-17 00:37:49,589 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-05-17 00:37:49,603 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-05-17 00:37:49,613 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-05-17 00:37:49,637 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-17 00:37:49,640 [ scc.git] DEBUG Check current status 2026-05-17 00:37:49,640 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-17 00:37:49,642 [ scc.git] DEBUG a89fa3e merge master -Dorg -Snone 2026-05-17 00:37:49,642 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-17 00:37:49,685 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-17 00:37:49,688 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-17 00:37:49,690 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-17 00:37:49,693 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-17 00:37:49,698 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-05-17 00:37:49,701 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-17 00:37:49,703 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-17 00:37:49,707 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-05-17 00:37:49,710 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-17 00:37:49,712 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-17 00:37:49,715 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-17 00:37:49,718 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-17 00:37:49,721 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-17 00:37:49,723 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-17 00:37:49,726 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-17 00:37:49,729 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-17 00:37:49,732 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-17 00:37:49,734 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-17 00:37:49,737 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-17 00:37:49,739 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-17 00:37:49,742 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-17 00:37:49,745 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-05-17 00:37:49,746 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-17 00:37:49,746 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-17 00:37:49,746 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-17 00:37:49,746 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-17 00:37:49,746 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-17 00:37:49,746 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-05-17 00:37:49,746 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:37:50,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-17 00:37:50,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-17 00:37:50,666 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:37:51,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:51,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:37:52,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:52,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:37:52,722 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-17 00:37:53,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-17 00:37:53,199 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:37:53,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:54,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:37:54,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:55,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:37:55,247 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-17 00:37:55,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-17 00:37:55,721 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:37:56,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:56,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:37:57,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-17 00:37:57,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:37:57,788 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-17 00:37:57,788 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:37:57,788 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:37:57,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:37:57,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:37:57,793 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:37:57,793 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:37:57,796 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:37:57,798 [ scc.git] DEBUG Already up to date. 2026-05-17 00:37:57,799 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-17 00:37:58,178 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:37:58,178 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-17 00:37:58,182 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-17 00:37:58,528 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:37:58,528 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-17 00:37:58,532 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-17 00:37:58,877 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-17 00:37:58,877 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-17 00:37:58,881 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:37:58,881 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:37:58,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:37:58,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-17 00:37:58,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:37:58,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-17 00:37:58,891 [ scc.git] DEBUG Already up to date. 2026-05-17 00:37:59,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:37:59,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-17 00:37:59,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:37:59,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-17 00:37:59,078 [ scc.git] DEBUG Already up to date. 2026-05-17 00:37:59,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:37:59,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-17 00:37:59,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:37:59,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-17 00:37:59,505 [ scc.git] DEBUG Already up to date. 2026-05-17 00:37:59,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:37:59,974 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:38:00,022 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:00,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:00,024 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:38:00,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-05-17 00:38:00,410 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:38:00,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-17 00:38:00,410 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:00,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:00,412 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:38:00,414 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:38:00,414 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:38:00,417 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:38:00,419 [ scc.git] DEBUG Already up to date. 2026-05-17 00:38:00,420 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:38:00,420 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:00,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:00,422 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:38:00,458 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:00,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:00,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:38:00,497 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:38:00,500 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcba4310> has no local changes 2026-05-17 00:38:00,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:38:00,505 [ scc.git] DEBUG [detached HEAD 29c3754] merge master -Dorg -Ssuccess-only 2026-05-17 00:38:00,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:38:00,506 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:38:01,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-05-17 00:38:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-05-17 00:38:01,477 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:38:02,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:02,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:03,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:03,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:04,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:38:04,213 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:38:04,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-05-17 00:38:05,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-05-17 00:38:05,179 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:38:05,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-17 00:38:05,180 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:05,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:05,182 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:38:05,185 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:38:05,185 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:38:05,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:38:05,190 [ scc.git] DEBUG Already up to date. 2026-05-17 00:38:05,190 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-05-17 00:38:05,516 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-05-17 00:38:05,516 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-05-17 00:38:05,519 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:38:05,519 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:05,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:05,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-17 00:38:05,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:05,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-17 00:38:05,532 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:38:05,535 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:38:05,535 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:38:05,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:05,725 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:38:05,761 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:05,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:05,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:38:05,799 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:38:05,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcb14ad0> has no local changes 2026-05-17 00:38:05,802 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:38:05,807 [ scc.git] DEBUG [detached HEAD 1f676dc] merge master -Dorg -Ssuccess-only 2026-05-17 00:38:05,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:38:05,807 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:38:06,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-05-17 00:38:06,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-05-17 00:38:07,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-05-17 00:38:08,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:08,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:09,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:09,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:10,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:38:10,038 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-05-17 00:38:10,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-05-17 00:38:10,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-05-17 00:38:10,997 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:38:10,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-17 00:38:10,997 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:10,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:10,999 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:38:11,002 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:38:11,002 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:38:11,005 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:38:11,012 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-05-17 00:38:11,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-05-17 00:38:12,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-05-17 00:38:13,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-05-17 00:38:13,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-05-17 00:38:13,692 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-05-17 00:38:14,020 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-05-17 00:38:14,020 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-05-17 00:38:14,024 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:38:14,024 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:14,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:14,026 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-17 00:38:14,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:14,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-17 00:38:14,039 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-05-17 00:38:14,040 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:38:14,043 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-05-17 00:38:14,043 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-05-17 00:38:14,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:14,221 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:38:14,257 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:14,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:14,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:38:14,295 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:38:14,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcbce7d0> has no local changes 2026-05-17 00:38:14,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:38:14,304 [ scc.git] DEBUG [detached HEAD 3b22ae2] merge master -Dorg -Ssuccess-only 2026-05-17 00:38:14,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:38:14,304 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:38:14,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-05-17 00:38:15,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-05-17 00:38:16,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:16,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:17,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:17,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-05-17 00:38:18,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:18,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:19,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:19,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-05-17 00:38:20,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:20,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:21,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:21,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:22,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:22,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:23,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-05-17 00:38:23,178 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-05-17 00:38:23,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-05-17 00:38:24,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-05-17 00:38:24,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:25,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:25,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:26,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:26,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:27,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:27,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-05-17 00:38:27,665 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-17 00:38:28,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-05-17 00:38:28,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-05-17 00:38:29,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-05-17 00:38:29,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-05-17 00:38:30,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:30,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:31,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:31,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:32,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:32,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:33,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-05-17 00:38:33,421 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-17 00:38:33,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-05-17 00:38:34,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-05-17 00:38:34,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:35,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:35,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:36,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:36,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:37,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:37,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-05-17 00:38:37,832 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-05-17 00:38:38,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-05-17 00:38:38,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-05-17 00:38:39,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-05-17 00:38:39,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-05-17 00:38:40,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-05-17 00:38:40,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-05-17 00:38:41,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-05-17 00:38:41,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-05-17 00:38:41,848 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:38:41,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-17 00:38:41,848 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:41,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:41,850 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:38:41,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:38:41,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:38:41,856 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:38:41,868 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-05-17 00:38:42,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-05-17 00:38:43,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-05-17 00:38:43,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-05-17 00:38:44,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-05-17 00:38:45,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-05-17 00:38:45,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-05-17 00:38:46,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-05-17 00:38:47,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-05-17 00:38:48,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-05-17 00:38:48,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-05-17 00:38:49,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-05-17 00:38:50,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-05-17 00:38:50,059 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-05-17 00:38:50,425 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-17 00:38:50,425 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-05-17 00:38:50,429 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-05-17 00:38:50,749 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-17 00:38:50,749 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-05-17 00:38:50,753 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-05-17 00:38:51,104 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-17 00:38:51,104 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-05-17 00:38:51,107 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-05-17 00:38:51,433 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-17 00:38:51,433 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-05-17 00:38:51,437 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:38:51,437 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:51,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:51,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-17 00:38:51,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:51,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging README.rst 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-17 00:38:51,458 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:38:51,458 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:38:51,461 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:51,465 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-17 00:38:51,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:51,652 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-17 00:38:51,656 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:51,658 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py --conflicts 2026-05-17 00:38:51,660 [ scc.config] DEBUG Found github.token 2026-05-17 00:38:51,660 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-05-17 00:38:51,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-17 00:38:51,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:51,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-17 00:38:51,675 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-17 00:38:51,675 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-17 00:38:51,675 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-17 00:38:51,675 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-17 00:38:51,675 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:38:51,675 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:38:51,678 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:51,682 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-17 00:38:52,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:52,076 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-17 00:38:52,079 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:52,082 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-05-17 00:38:52,084 [ scc.config] DEBUG Found github.token 2026-05-17 00:38:52,084 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-05-17 00:38:52,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-17 00:38:52,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:52,090 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-17 00:38:52,100 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-17 00:38:52,100 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-05-17 00:38:52,100 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-05-17 00:38:52,100 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-05-17 00:38:52,100 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-05-17 00:38:52,100 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:38:52,101 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:38:52,103 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:52,107 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-17 00:38:52,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:52,532 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-17 00:38:52,535 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-17 00:38:52,537 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-05-17 00:38:52,539 [ scc.config] DEBUG Found github.token 2026-05-17 00:38:52,539 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-05-17 00:38:52,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-17 00:38:52,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:52,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-17 00:38:52,552 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:38:52,555 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-05-17 00:38:52,555 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-05-17 00:38:52,555 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-05-17 00:38:52,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:38:52,963 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:38:53,001 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:38:53,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:38:53,004 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:38:53,041 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:38:53,044 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcfcf250> has no local changes 2026-05-17 00:38:53,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:38:53,050 [ scc.git] DEBUG [detached HEAD 891b24a] merge master -Dorg -Ssuccess-only 2026-05-17 00:38:53,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:38:53,050 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:38:53,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-05-17 00:38:54,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686 HTTP/1.1" 200 None 2026-05-17 00:38:54,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686/comments HTTP/1.1" 200 None 2026-05-17 00:38:55,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:55,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:56,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:56,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:57,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fd09cda763a6c8192985a9d4e045eb3903f04d15?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:38:57,117 [ scc.repo] DEBUG - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-17 00:38:57,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/681 HTTP/1.1" 200 None 2026-05-17 00:38:57,579 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:38:58,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-17 00:38:58,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:38:59,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:38:59,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:00,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6838d4ffce610fded2cb7c41dc4e01ea7d485846?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:00,225 [ scc.repo] DEBUG - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-17 00:39:00,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-05-17 00:39:01,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-05-17 00:39:01,184 [ scc.repo] DEBUG # ... Include label: include 2026-05-17 00:39:01,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:02,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:02,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:39:03,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:03,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:03,817 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-17 00:39:04,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-05-17 00:39:04,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-05-17 00:39:04,825 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:39:04,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-17 00:39:04,825 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:04,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:04,828 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:39:04,831 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:39:04,831 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:39:04,837 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:39:04,895 [ scc.git] DEBUG Updating 9cc36cde..6ffb01dc 2026-05-17 00:39:05,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-05-17 00:39:06,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-05-17 00:39:06,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-05-17 00:39:07,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-05-17 00:39:08,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-05-17 00:39:08,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-05-17 00:39:09,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-05-17 00:39:10,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-05-17 00:39:11,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-05-17 00:39:11,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-05-17 00:39:12,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-05-17 00:39:13,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-05-17 00:39:13,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-05-17 00:39:14,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-05-17 00:39:15,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-05-17 00:39:15,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-05-17 00:39:16,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-05-17 00:39:17,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-05-17 00:39:17,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-05-17 00:39:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-05-17 00:39:19,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-05-17 00:39:19,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-05-17 00:39:20,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-05-17 00:39:21,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-05-17 00:39:21,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-05-17 00:39:22,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-05-17 00:39:23,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-05-17 00:39:23,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-05-17 00:39:24,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-05-17 00:39:25,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-05-17 00:39:25,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-05-17 00:39:26,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-05-17 00:39:27,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-05-17 00:39:27,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-05-17 00:39:28,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-05-17 00:39:29,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-05-17 00:39:29,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-05-17 00:39:30,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-05-17 00:39:31,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-05-17 00:39:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-05-17 00:39:32,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-05-17 00:39:33,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-05-17 00:39:34,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-05-17 00:39:34,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-05-17 00:39:35,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-05-17 00:39:35,395 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-05-17 00:39:35,784 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-17 00:39:35,784 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-05-17 00:39:35,788 [ scc.git] DEBUG Calling 'git fetch origin pull/681/head' 2026-05-17 00:39:36,142 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-17 00:39:36,142 [ scc.git] DEBUG * branch refs/pull/681/head -> FETCH_HEAD 2026-05-17 00:39:36,147 [ scc.git] DEBUG Calling 'git fetch origin pull/686/head' 2026-05-17 00:39:36,469 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-17 00:39:36,469 [ scc.git] DEBUG * branch refs/pull/686/head -> FETCH_HEAD 2026-05-17 00:39:36,473 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:39:36,473 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:36,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:36,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-17 00:39:36,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:36,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-17 00:39:36,525 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-05-17 00:39:36,525 [ scc.git] DEBUG Auto-merging src/index.html 2026-05-17 00:39:36,525 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-05-17 00:39:36,526 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:39:36,531 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-05-17 00:39:36,531 [ scc.git] DEBUG src/index.html | 11 ++ 2026-05-17 00:39:36,532 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-05-17 00:39:36,532 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-05-17 00:39:36,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:39:36,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-17 00:39:36,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:36,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 681 (Bump dompurify from 3.3.2 to 3.4.0) 6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-17 00:39:36,735 [ scc.git] DEBUG Auto-merging package.json 2026-05-17 00:39:36,736 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:39:36,739 [ scc.git] DEBUG package-lock.json | 11 ++++------- 2026-05-17 00:39:36,739 [ scc.git] DEBUG package.json | 2 +- 2026-05-17 00:39:36,739 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 8 deletions(-) 2026-05-17 00:39:37,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:39:37,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-17 00:39:37,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:37,153 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 686 (Add note about zarr etc requirement for export script with zarr images) fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-17 00:39:37,167 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:39:37,170 [ scc.git] DEBUG README.rst | 40 +++++++++++++++++++++------------------- 2026-05-17 00:39:37,170 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 19 deletions(-) 2026-05-17 00:39:37,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:39:37,598 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:39:37,639 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:37,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:37,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:39:37,680 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:39:37,685 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcfcf210> has no local changes 2026-05-17 00:39:37,685 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..6ffb01dc Previously merged: - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:39:37,693 [ scc.git] DEBUG [detached HEAD f56b429c] merge master -Dorg -Ssuccess-only 2026-05-17 00:39:37,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:39:37,694 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:39:38,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-05-17 00:39:38,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-05-17 00:39:38,637 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:39:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:39,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:40,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:39:40,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:41,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:41,327 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:39:41,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-05-17 00:39:42,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-05-17 00:39:42,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:43,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:43,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:44,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:44,427 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-05-17 00:39:44,427 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:39:44,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-17 00:39:44,427 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:44,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:44,430 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:39:44,432 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:39:44,432 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:39:44,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:39:44,437 [ scc.git] DEBUG Already up to date. 2026-05-17 00:39:44,437 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-05-17 00:39:44,791 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-17 00:39:44,791 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-05-17 00:39:44,795 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-05-17 00:39:45,111 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-17 00:39:45,111 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-05-17 00:39:45,114 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:39:45,114 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:45,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:45,116 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-17 00:39:45,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:45,121 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-17 00:39:45,127 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-05-17 00:39:45,128 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:39:45,131 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-05-17 00:39:45,131 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-05-17 00:39:45,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:39:45,324 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-17 00:39:45,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:45,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-17 00:39:45,336 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:39:45,339 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:39:45,339 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:39:45,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:39:45,792 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:39:45,829 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:39:45,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:39:45,831 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:39:45,868 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:39:45,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc1f9050> has no local changes 2026-05-17 00:39:45,872 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:39:45,877 [ scc.git] DEBUG [detached HEAD 2e35d16] merge master -Dorg -Ssuccess-only 2026-05-17 00:39:45,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:39:45,878 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:39:46,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-05-17 00:39:46,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-05-17 00:39:47,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-05-17 00:39:47,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-05-17 00:39:47,959 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:39:48,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:49,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:49,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:50,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:50,078 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-17 00:39:50,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-05-17 00:39:51,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-05-17 00:39:51,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-05-17 00:39:51,567 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:39:52,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:52,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:53,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:53,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:53,634 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-17 00:39:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-05-17 00:39:54,096 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:39:54,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:55,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:55,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:56,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:56,180 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-17 00:39:56,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-05-17 00:39:56,653 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:39:57,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:58,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:39:58,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-17 00:39:59,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:39:59,008 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-17 00:39:59,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-05-17 00:39:59,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-05-17 00:39:59,980 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:40:00,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:01,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:01,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:02,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:02,040 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-17 00:40:02,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-05-17 00:40:02,516 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:40:03,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:03,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:04,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:04,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:04,589 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-17 00:40:05,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-05-17 00:40:05,071 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:40:05,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:06,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:06,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:07,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:07,348 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-17 00:40:07,349 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:40:07,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-17 00:40:07,349 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:07,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:07,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:40:07,354 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:40:07,354 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:40:07,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:40:07,359 [ scc.git] DEBUG Already up to date. 2026-05-17 00:40:07,360 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-05-17 00:40:07,775 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:07,775 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-05-17 00:40:07,779 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-05-17 00:40:08,151 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:08,151 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-05-17 00:40:08,155 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-05-17 00:40:08,483 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:08,483 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-05-17 00:40:08,486 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-05-17 00:40:08,848 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:08,848 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-05-17 00:40:08,852 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-05-17 00:40:09,185 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:09,185 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-05-17 00:40:09,189 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-05-17 00:40:09,525 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:09,526 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-05-17 00:40:09,529 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-05-17 00:40:09,897 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-17 00:40:09,897 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-05-17 00:40:09,901 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:40:09,901 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:09,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:09,903 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-17 00:40:09,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:09,908 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-17 00:40:09,916 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:09,920 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-17 00:40:09,920 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-17 00:40:10,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:10,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-17 00:40:10,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:10,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-17 00:40:10,142 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:10,143 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:10,147 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-05-17 00:40:10,147 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-05-17 00:40:10,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:10,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-17 00:40:10,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:10,561 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-17 00:40:10,576 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:10,576 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-17 00:40:10,576 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:40:10,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:40:10,579 [ scc.git] DEBUG Calling 'git reset --hard c1af5d07cfdfafd9b80cfda7d4d556f272004998' 2026-05-17 00:40:10,583 [ scc.git] DEBUG HEAD is now at c1af5d0 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-05-17 00:40:10,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:10,990 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-17 00:40:10,992 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-17 00:40:10,995 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-05-17 00:40:10,997 [ scc.config] DEBUG Found github.token 2026-05-17 00:40:10,997 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-05-17 00:40:10,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-17 00:40:10,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:11,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-17 00:40:11,015 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:11,016 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:11,020 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-05-17 00:40:11,020 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-05-17 00:40:11,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:11,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-17 00:40:11,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:11,432 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-17 00:40:11,447 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:11,447 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:11,452 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-05-17 00:40:11,452 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-05-17 00:40:11,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:11,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-17 00:40:11,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:11,863 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-17 00:40:11,878 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:11,878 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-17 00:40:11,878 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:40:11,878 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:40:11,881 [ scc.git] DEBUG Calling 'git reset --hard 38949422b111b4d865a65257512d645839a784bb' 2026-05-17 00:40:11,885 [ scc.git] DEBUG HEAD is now at 3894942 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-17 00:40:12,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:12,293 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-17 00:40:12,295 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-17 00:40:12,298 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-05-17 00:40:12,300 [ scc.config] DEBUG Found github.token 2026-05-17 00:40:12,300 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-05-17 00:40:12,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-17 00:40:12,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:12,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-17 00:40:12,321 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:40:12,321 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-17 00:40:12,321 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:40:12,322 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:40:12,324 [ scc.git] DEBUG Calling 'git reset --hard 38949422b111b4d865a65257512d645839a784bb' 2026-05-17 00:40:12,329 [ scc.git] DEBUG HEAD is now at 3894942 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-17 00:40:12,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:12,725 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-17 00:40:12,728 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-17 00:40:12,730 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-05-17 00:40:12,732 [ scc.config] DEBUG Found github.token 2026-05-17 00:40:12,732 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-05-17 00:40:12,732 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:40:12,768 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:12,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:12,770 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:40:12,807 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:40:12,811 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc1ff390> has no local changes 2026-05-17 00:40:12,811 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:40:12,818 [ scc.git] DEBUG [detached HEAD e232091] merge master -Dorg -Ssuccess-only 2026-05-17 00:40:12,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:40:12,818 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:40:13,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-05-17 00:40:13,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/528 HTTP/1.1" 200 None 2026-05-17 00:40:13,860 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:40:14,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:15,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:15,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:40:16,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:16,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9d16e2d727cd57c2e6097612fbddffeab29e4f62?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:16,711 [ scc.repo] DEBUG - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-05-17 00:40:17,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-05-17 00:40:17,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-05-17 00:40:17,686 [ scc.repo] DEBUG # ... Include label: include 2026-05-17 00:40:18,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/591a0a47b94189cfe29a3a18dabef97dc53ed6eb?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:18,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/591a0a47b94189cfe29a3a18dabef97dc53ed6eb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:19,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/591a0a47b94189cfe29a3a18dabef97dc53ed6eb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:40:19,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/591a0a47b94189cfe29a3a18dabef97dc53ed6eb?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:20,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/591a0a47b94189cfe29a3a18dabef97dc53ed6eb?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:20,333 [ scc.repo] DEBUG - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-17 00:40:20,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-05-17 00:40:21,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-05-17 00:40:21,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-05-17 00:40:22,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-05-17 00:40:22,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-05-17 00:40:23,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-05-17 00:40:23,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-05-17 00:40:24,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-05-17 00:40:24,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-05-17 00:40:25,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:25,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:26,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:26,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:26,846 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-17 00:40:27,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-05-17 00:40:27,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-05-17 00:40:28,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:28,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:29,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:29,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:29,861 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-05-17 00:40:30,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-05-17 00:40:30,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-05-17 00:40:31,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:31,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:32,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:32,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a081a9f2892763bd49a7ad7ba425965150e76f97?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:32,796 [ scc.repo] DEBUG - PR 227 will-moore 'Vectortile investigation' 2026-05-17 00:40:32,796 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:40:32,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-17 00:40:32,797 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:32,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:32,799 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:40:32,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:40:32,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:40:32,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:40:32,837 [ scc.git] DEBUG Updating 7a798ce..0b7eaf7 2026-05-17 00:40:33,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-05-17 00:40:34,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-05-17 00:40:34,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-05-17 00:40:35,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-05-17 00:40:36,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-05-17 00:40:36,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-05-17 00:40:37,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-05-17 00:40:37,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-05-17 00:40:38,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-05-17 00:40:39,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-05-17 00:40:39,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-05-17 00:40:40,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-05-17 00:40:41,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-05-17 00:40:42,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-05-17 00:40:42,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-05-17 00:40:43,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-05-17 00:40:44,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-05-17 00:40:44,236 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2026-05-17 00:40:44,612 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-17 00:40:44,612 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2026-05-17 00:40:44,616 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-05-17 00:40:44,942 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-17 00:40:44,942 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-05-17 00:40:44,946 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-05-17 00:40:45,262 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-17 00:40:45,262 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-05-17 00:40:45,266 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2026-05-17 00:40:45,612 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-17 00:40:45,612 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2026-05-17 00:40:45,615 [ scc.git] DEBUG Calling 'git fetch origin pull/528/head' 2026-05-17 00:40:45,960 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-17 00:40:45,960 [ scc.git] DEBUG * branch refs/pull/528/head -> FETCH_HEAD 2026-05-17 00:40:45,964 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:40:45,964 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:45,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:45,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-17 00:40:45,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:45,977 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Vectortile investigation) a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-17 00:40:46,001 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-05-17 00:40:46,001 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-05-17 00:40:46,001 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-17 00:40:46,001 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:46,007 [ scc.git] DEBUG plugin/omero_iviewer/urls.py | 7 +- 2026-05-17 00:40:46,007 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 88 ++++++++++ 2026-05-17 00:40:46,007 [ scc.git] DEBUG src/events/events.js | 2 + 2026-05-17 00:40:46,007 [ scc.git] DEBUG src/model/regions_info.js | 37 +++- 2026-05-17 00:40:46,007 [ scc.git] DEBUG src/regions/regions-list.js | 26 +++ 2026-05-17 00:40:46,007 [ scc.git] DEBUG src/utils/constants.js | 6 + 2026-05-17 00:40:46,007 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 48 +++++- 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 78 +++++++-- 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/format/OmeJSON.js | 79 +++++++++ 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/source/Regions.js | 56 ++++++ 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/source/TiledRegions.js | 277 ++++++++++++++++++++++++++++++ 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/utils/Regions.js | 51 ++++-- 2026-05-17 00:40:46,008 [ scc.git] DEBUG src/viewers/viewer/utils/Style.js | 19 +- 2026-05-17 00:40:46,008 [ scc.git] DEBUG 13 files changed, 727 insertions(+), 47 deletions(-) 2026-05-17 00:40:46,009 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/format/OmeJSON.js 2026-05-17 00:40:46,009 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/source/TiledRegions.js 2026-05-17 00:40:46,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:46,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-17 00:40:46,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:46,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-17 00:40:46,223 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-05-17 00:40:46,223 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-05-17 00:40:46,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:46,227 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-05-17 00:40:46,227 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-05-17 00:40:46,227 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-05-17 00:40:46,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:46,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-17 00:40:46,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:46,650 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-17 00:40:46,664 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-05-17 00:40:46,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:46,668 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-05-17 00:40:46,668 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-05-17 00:40:46,668 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-05-17 00:40:47,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:47,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...591a0a47b94189cfe29a3a18dabef97dc53ed6eb' 2026-05-17 00:40:47,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:47,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) 591a0a47b94189cfe29a3a18dabef97dc53ed6eb' 2026-05-17 00:40:47,118 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-17 00:40:47,119 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:47,123 [ scc.git] DEBUG css/app.css | 327 +++++++++++++++++++++++++++++++++ 2026-05-17 00:40:47,123 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 71 ++++++-- 2026-05-17 00:40:47,123 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 91 ++++++++++ 2026-05-17 00:40:47,123 [ scc.git] DEBUG src/viewers/viewer/grid-overlay.js | 362 +++++++++++++++++++++++++++++++++++++ 2026-05-17 00:40:47,123 [ scc.git] DEBUG 4 files changed, 835 insertions(+), 16 deletions(-) 2026-05-17 00:40:47,123 [ scc.git] DEBUG mode change 100644 => 100755 css/app.css 2026-05-17 00:40:47,123 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.html 2026-05-17 00:40:47,123 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.js 2026-05-17 00:40:47,123 [ scc.git] DEBUG create mode 100755 src/viewers/viewer/grid-overlay.js 2026-05-17 00:40:47,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:47,540 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9d16e2d727cd57c2e6097612fbddffeab29e4f62' 2026-05-17 00:40:47,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:47,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 528 (Bump fast-uri from 3.1.0 to 3.1.2) 9d16e2d727cd57c2e6097612fbddffeab29e4f62' 2026-05-17 00:40:47,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:47,578 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-17 00:40:47,578 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-17 00:40:47,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:47,973 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:40:48,009 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:48,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:48,011 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:40:48,047 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:40:48,054 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc212510> has no local changes 2026-05-17 00:40:48,054 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..0b7eaf7 Previously merged: - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:40:48,060 [ scc.git] DEBUG [detached HEAD aaf9ccf] merge master -Dorg -Ssuccess-only 2026-05-17 00:40:48,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:40:48,061 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:40:48,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-05-17 00:40:49,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-05-17 00:40:49,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-05-17 00:40:49,539 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:40:50,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:50,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:51,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:40:51,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:52,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:52,220 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:40:52,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-05-17 00:40:53,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:53,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:54,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:54,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:54,662 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:40:55,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-05-17 00:40:55,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-05-17 00:40:56,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:56,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:40:57,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-17 00:40:57,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:40:57,791 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-05-17 00:40:57,791 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:40:57,791 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-17 00:40:57,792 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:57,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:57,794 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:40:57,796 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:40:57,796 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:40:57,799 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:40:57,802 [ scc.git] DEBUG Already up to date. 2026-05-17 00:40:57,802 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-17 00:40:58,128 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-17 00:40:58,128 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-17 00:40:58,132 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-05-17 00:40:58,480 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-17 00:40:58,480 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-05-17 00:40:58,484 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-05-17 00:40:58,784 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-17 00:40:58,784 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-05-17 00:40:58,788 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:40:58,788 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:58,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:58,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-17 00:40:58,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:58,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-17 00:40:58,803 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:58,806 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-05-17 00:40:58,806 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-05-17 00:40:58,806 [ scc.git] DEBUG requirements.txt | 2 +- 2026-05-17 00:40:58,806 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-05-17 00:40:58,806 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-05-17 00:40:58,806 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-05-17 00:40:58,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:58,986 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-17 00:40:58,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:58,992 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-17 00:40:58,999 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:40:59,001 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:40:59,001 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:40:59,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:59,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-17 00:40:59,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:59,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-17 00:40:59,425 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-05-17 00:40:59,425 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-05-17 00:40:59,425 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:40:59,425 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:40:59,428 [ scc.git] DEBUG Calling 'git reset --hard d418fbb163ca3f45429c91362c73b4b479c52fab' 2026-05-17 00:40:59,432 [ scc.git] DEBUG HEAD is now at d418fbb merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-05-17 00:40:59,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:40:59,868 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-17 00:40:59,870 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-05-17 00:40:59,872 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-05-17 00:40:59,874 [ scc.config] DEBUG Found github.token 2026-05-17 00:40:59,875 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-05-17 00:40:59,875 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:40:59,911 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:40:59,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:40:59,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:40:59,948 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:40:59,952 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc20bd50> has no local changes 2026-05-17 00:40:59,952 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:40:59,957 [ scc.git] DEBUG [detached HEAD 4d85e64] merge master -Dorg -Ssuccess-only 2026-05-17 00:40:59,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:40:59,958 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-05-17 00:41:00,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-05-17 00:41:01,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-05-17 00:41:02,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:02,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:03,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:03,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:03,514 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-17 00:41:03,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-05-17 00:41:04,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-05-17 00:41:05,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:05,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:06,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:06,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:06,539 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-17 00:41:06,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-05-17 00:41:07,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-05-17 00:41:08,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:08,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:08,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:09,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:09,440 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-17 00:41:09,440 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:09,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-17 00:41:09,440 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:09,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:09,443 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:09,445 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:09,445 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:09,448 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:09,453 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-05-17 00:41:10,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-05-17 00:41:10,107 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-05-17 00:41:10,446 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-17 00:41:10,446 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-05-17 00:41:10,450 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-05-17 00:41:10,719 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-17 00:41:10,719 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-05-17 00:41:10,723 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-05-17 00:41:11,105 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-17 00:41:11,105 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-05-17 00:41:11,110 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:11,110 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:11,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:11,112 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-17 00:41:11,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:11,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-17 00:41:11,130 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-05-17 00:41:11,130 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-05-17 00:41:11,130 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-17 00:41:11,130 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-17 00:41:11,130 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:41:11,130 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:41:11,132 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-17 00:41:11,136 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-17 00:41:11,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:11,327 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-17 00:41:11,331 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-17 00:41:11,334 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-05-17 00:41:11,336 [ scc.config] DEBUG Found github.token 2026-05-17 00:41:11,336 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-05-17 00:41:11,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-17 00:41:11,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:11,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-17 00:41:11,355 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-17 00:41:11,355 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-17 00:41:11,355 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-05-17 00:41:11,355 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:41:11,356 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:41:11,358 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-17 00:41:11,363 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-17 00:41:11,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:11,776 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-17 00:41:11,779 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-17 00:41:11,782 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-05-17 00:41:11,784 [ scc.config] DEBUG Found github.token 2026-05-17 00:41:11,784 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-05-17 00:41:11,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-17 00:41:11,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:11,789 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-17 00:41:11,797 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:11,801 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-05-17 00:41:11,801 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-05-17 00:41:12,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:12,208 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:12,245 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:12,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:12,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:12,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:12,286 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcc2ee10> has no local changes 2026-05-17 00:41:12,286 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:12,292 [ scc.git] DEBUG [detached HEAD abf3c10] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:12,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:12,292 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:12,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-05-17 00:41:13,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-05-17 00:41:13,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:14,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:14,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:15,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:15,278 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:41:15,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-05-17 00:41:15,895 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:16,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:17,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:17,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:17,967 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-17 00:41:18,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-05-17 00:41:18,429 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:19,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:19,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:20,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:20,500 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-17 00:41:20,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-05-17 00:41:21,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-05-17 00:41:21,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-05-17 00:41:22,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-05-17 00:41:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-05-17 00:41:23,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-05-17 00:41:23,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-05-17 00:41:23,929 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:23,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-17 00:41:23,929 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:23,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:23,932 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:23,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:23,934 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:23,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:23,939 [ scc.git] DEBUG Already up to date. 2026-05-17 00:41:23,940 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-05-17 00:41:24,281 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-17 00:41:24,281 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-05-17 00:41:24,286 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-05-17 00:41:24,585 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-17 00:41:24,585 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-05-17 00:41:24,589 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-05-17 00:41:24,905 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-17 00:41:24,905 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-05-17 00:41:24,909 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:24,909 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:24,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:24,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-17 00:41:24,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:24,916 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-17 00:41:24,923 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:24,926 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-05-17 00:41:24,926 [ scc.git] DEBUG package.json | 2 +- 2026-05-17 00:41:24,926 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-05-17 00:41:25,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:25,105 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-05-17 00:41:25,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:25,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-05-17 00:41:25,117 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-17 00:41:25,118 [ scc.git] DEBUG Auto-merging package.json 2026-05-17 00:41:25,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:25,121 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-05-17 00:41:25,121 [ scc.git] DEBUG package.json | 2 +- 2026-05-17 00:41:25,121 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-05-17 00:41:25,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:25,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-17 00:41:25,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:25,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-17 00:41:25,562 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:25,565 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:41:25,565 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:41:25,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:25,989 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:26,026 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:26,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:26,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:26,065 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:26,069 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc21d9d0> has no local changes 2026-05-17 00:41:26,069 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:26,075 [ scc.git] DEBUG [detached HEAD ac175da] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:26,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:26,075 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:26,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-05-17 00:41:27,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-05-17 00:41:27,010 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:27,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:28,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:28,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:41:29,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:29,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:29,730 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:41:29,730 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:29,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-17 00:41:29,731 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:29,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:29,733 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:29,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:29,736 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:29,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:29,741 [ scc.git] DEBUG Already up to date. 2026-05-17 00:41:29,741 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-05-17 00:41:30,077 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-05-17 00:41:30,077 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-05-17 00:41:30,081 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:30,081 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:30,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:30,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-17 00:41:30,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:30,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-17 00:41:30,093 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:30,096 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:41:30,096 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:41:30,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:30,271 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:30,307 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:30,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:30,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:30,345 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:30,348 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc20a2d0> has no local changes 2026-05-17 00:41:30,348 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:30,353 [ scc.git] DEBUG [detached HEAD 77a7ace] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:30,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:30,353 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:30,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-05-17 00:41:31,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-05-17 00:41:31,267 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:31,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-17 00:41:31,267 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:31,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:31,270 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:31,272 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:31,272 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:31,275 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:31,282 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-05-17 00:41:31,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-05-17 00:41:32,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-05-17 00:41:32,656 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:32,656 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:32,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:32,659 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:32,697 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:32,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:32,699 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:32,735 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:32,738 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc249510> has no local changes 2026-05-17 00:41:32,738 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:32,744 [ scc.git] DEBUG [detached HEAD a7f86d5] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:32,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:32,744 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:33,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-05-17 00:41:33,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-05-17 00:41:33,706 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:34,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:34,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:35,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:41:36,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:36,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:36,474 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:41:36,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-05-17 00:41:37,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-05-17 00:41:38,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:38,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:39,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:39,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:39,510 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-17 00:41:39,510 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:39,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-17 00:41:39,510 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:39,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:39,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:39,515 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:39,515 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:39,517 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:39,520 [ scc.git] DEBUG Already up to date. 2026-05-17 00:41:39,520 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-17 00:41:39,885 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-17 00:41:39,886 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-17 00:41:39,889 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-17 00:41:40,211 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-17 00:41:40,211 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-17 00:41:40,216 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:40,216 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:40,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:40,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-17 00:41:40,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:40,223 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-17 00:41:40,230 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG Auto-merging setup.py 2026-05-17 00:41:40,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-05-17 00:41:40,231 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:41:40,231 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:41:40,233 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-17 00:41:40,237 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-05-17 00:41:40,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:40,422 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-17 00:41:40,425 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-17 00:41:40,427 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2026-05-17 00:41:40,429 [ scc.config] DEBUG Found github.token 2026-05-17 00:41:40,429 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-05-17 00:41:40,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-17 00:41:40,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:40,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-17 00:41:40,440 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:40,442 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:41:40,442 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:41:40,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:40,851 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:40,888 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:40,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:40,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:40,925 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:40,928 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc249310> has no local changes 2026-05-17 00:41:40,929 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:40,934 [ scc.git] DEBUG [detached HEAD c13ff98] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:40,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:40,934 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:41,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-05-17 00:41:41,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-05-17 00:41:42,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-05-17 00:41:42,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-05-17 00:41:43,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:44,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:44,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:45,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:45,026 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-17 00:41:45,026 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:45,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-17 00:41:45,027 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:45,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:45,029 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:45,032 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:45,032 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:45,034 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:45,041 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-05-17 00:41:45,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-05-17 00:41:46,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-05-17 00:41:47,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-05-17 00:41:47,041 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-17 00:41:47,348 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-05-17 00:41:47,348 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-17 00:41:47,353 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:47,353 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:47,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:47,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-05-17 00:41:47,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:47,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-05-17 00:41:47,367 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-05-17 00:41:47,368 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:47,370 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-05-17 00:41:47,370 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-05-17 00:41:47,371 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-05-17 00:41:47,371 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-05-17 00:41:47,371 [ scc.git] DEBUG ms/test | 2 ++ 2026-05-17 00:41:47,371 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-05-17 00:41:47,371 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-05-17 00:41:47,371 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-05-17 00:41:47,371 [ scc.git] DEBUG create mode 100755 ms/test 2026-05-17 00:41:47,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:47,553 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:47,590 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:47,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:47,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:47,627 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:47,630 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc226190> has no local changes 2026-05-17 00:41:47,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:47,636 [ scc.git] DEBUG [detached HEAD 41cfb4e] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:47,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:47,636 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:48,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-05-17 00:41:48,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-05-17 00:41:48,514 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:49,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:49,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:50,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:41:50,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:51,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:51,225 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:41:51,225 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:51,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-17 00:41:51,225 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:51,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:51,228 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:51,230 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:51,230 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:51,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:51,235 [ scc.git] DEBUG Already up to date. 2026-05-17 00:41:51,236 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-17 00:41:51,595 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-05-17 00:41:51,596 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-17 00:41:51,599 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:51,599 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:51,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:51,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-17 00:41:51,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:51,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-17 00:41:51,612 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:51,615 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:41:51,615 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:41:51,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:51,797 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:51,832 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:51,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:51,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:51,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:51,873 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc25afd0> has no local changes 2026-05-17 00:41:51,873 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:51,878 [ scc.git] DEBUG [detached HEAD 3a42240] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:51,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:51,878 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:52,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-05-17 00:41:52,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-05-17 00:41:52,828 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:41:53,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:53,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:41:54,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:41:55,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:55,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:41:55,531 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:41:55,531 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:41:55,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-17 00:41:55,531 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:55,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:55,534 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:41:55,536 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:41:55,536 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:41:55,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:41:55,545 [ scc.git] DEBUG Updating deab817..160d894 2026-05-17 00:41:56,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-05-17 00:41:56,183 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-17 00:41:56,542 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-05-17 00:41:56,542 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-17 00:41:56,546 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:41:56,546 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:56,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:56,548 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-17 00:41:56,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:56,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-17 00:41:56,558 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:41:56,561 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:41:56,561 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:41:56,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:41:56,763 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:41:56,799 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:41:56,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:41:56,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:41:56,838 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:41:56,841 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc2a4e90> has no local changes 2026-05-17 00:41:56,841 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:41:56,846 [ scc.git] DEBUG [detached HEAD fd7edec] merge master -Dorg -Ssuccess-only 2026-05-17 00:41:56,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:41:56,847 [ scc.git] INFO Overriding base-branch from master to main 2026-05-17 00:41:56,847 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:41:57,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-05-17 00:41:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-05-17 00:41:58,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-05-17 00:41:58,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-17 00:41:59,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:42:00,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:42:00,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:00,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:42:00,956 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-05-17 00:42:01,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-05-17 00:42:02,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-05-17 00:42:02,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-05-17 00:42:03,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:03,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:42:04,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:04,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:42:04,600 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-17 00:42:04,600 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:42:04,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-17 00:42:04,600 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:04,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:04,603 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-05-17 00:42:04,605 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:42:04,605 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-05-17 00:42:04,608 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-05-17 00:42:04,614 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-05-17 00:42:05,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-05-17 00:42:05,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-05-17 00:42:05,958 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-05-17 00:42:06,309 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-17 00:42:06,309 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-05-17 00:42:06,313 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-05-17 00:42:06,641 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-17 00:42:06,641 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-05-17 00:42:06,644 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:42:06,644 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:06,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:06,646 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-17 00:42:06,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:06,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-17 00:42:06,658 [ scc.git] DEBUG Auto-merging README.rst 2026-05-17 00:42:06,658 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-05-17 00:42:06,658 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-05-17 00:42:06,658 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-17 00:42:06,658 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-17 00:42:06,659 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-17 00:42:06,661 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-17 00:42:06,665 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-17 00:42:06,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:06,876 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-17 00:42:06,879 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-17 00:42:06,881 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#143](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-05-17 00:42:06,883 [ scc.config] DEBUG Found github.token 2026-05-17 00:42:06,884 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-05-17 00:42:06,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-17 00:42:06,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:06,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-17 00:42:06,896 [ scc.git] DEBUG Auto-merging README.rst 2026-05-17 00:42:06,896 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-17 00:42:06,896 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:42:06,899 [ scc.git] DEBUG README.rst | 3 + 2026-05-17 00:42:06,899 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-05-17 00:42:06,899 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-05-17 00:42:06,899 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-05-17 00:42:06,899 [ scc.git] DEBUG setup.py | 5 +- 2026-05-17 00:42:06,899 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-05-17 00:42:06,899 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-05-17 00:42:07,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:07,330 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:42:07,367 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:07,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:07,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:07,405 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:07,408 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc21f710> has no local changes 2026-05-17 00:42:07,408 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:07,414 [ scc.git] DEBUG [detached HEAD 4dc9744] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:07,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:07,414 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:42:07,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-05-17 00:42:08,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-05-17 00:42:08,390 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:42:08,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:09,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:42:10,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:42:10,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:11,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:42:11,059 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:11,059 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:42:11,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-17 00:42:11,059 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:11,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:11,062 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:42:11,064 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:42:11,064 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:42:11,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:42:11,069 [ scc.git] DEBUG Already up to date. 2026-05-17 00:42:11,069 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-05-17 00:42:11,423 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-05-17 00:42:11,423 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-05-17 00:42:11,426 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:42:11,426 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:11,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:11,429 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-17 00:42:11,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:11,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-17 00:42:11,439 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:42:11,442 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:42:11,442 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:42:11,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:11,618 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:42:11,653 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:11,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:11,655 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:11,691 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:11,694 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc23acd0> has no local changes 2026-05-17 00:42:11,694 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:11,699 [ scc.git] DEBUG [detached HEAD 51b75e2] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:11,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:11,699 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:42:12,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-05-17 00:42:12,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-05-17 00:42:12,615 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-17 00:42:13,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:13,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-17 00:42:14,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-17 00:42:14,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-17 00:42:15,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-05-17 00:42:15,312 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:15,312 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:42:15,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-17 00:42:15,312 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:15,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:15,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:42:15,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:42:15,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:42:15,319 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:42:15,322 [ scc.git] DEBUG Already up to date. 2026-05-17 00:42:15,322 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-05-17 00:42:15,679 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-05-17 00:42:15,679 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-05-17 00:42:15,682 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:42:15,683 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:15,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:15,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-17 00:42:15,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:15,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-17 00:42:15,695 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-17 00:42:15,697 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-17 00:42:15,697 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-17 00:42:15,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:15,882 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:42:15,918 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:15,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:15,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:15,957 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:15,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc2cea90> has no local changes 2026-05-17 00:42:15,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:15,965 [ scc.git] DEBUG [detached HEAD f201628] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:15,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:15,966 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:42:16,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-05-17 00:42:16,313 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:42:16,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-17 00:42:16,313 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:16,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:16,315 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-17 00:42:16,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:42:16,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-17 00:42:16,320 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-17 00:42:16,322 [ scc.git] DEBUG Already up to date. 2026-05-17 00:42:16,322 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:42:16,323 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:16,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:16,325 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:42:16,360 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:16,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:16,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:16,398 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:16,401 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcec7910> has no local changes 2026-05-17 00:42:16,402 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:16,407 [ scc.git] DEBUG [detached HEAD d12c169] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:16,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:16,408 [ scc.git] INFO Overriding base-branch from master to develop 2026-05-17 00:42:16,408 [ scc.repo] DEBUG ## PRs found: 2026-05-17 00:42:16,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-05-17 00:42:16,774 [ scc.repo] DEBUG ## Branches found: 2026-05-17 00:42:16,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-17 00:42:16,774 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:16,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:16,776 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-05-17 00:42:16,778 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-17 00:42:16,778 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-05-17 00:42:16,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-05-17 00:42:16,792 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-05-17 00:42:17,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-05-17 00:42:18,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-05-17 00:42:18,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-05-17 00:42:19,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-05-17 00:42:20,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-05-17 00:42:20,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-05-17 00:42:21,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-05-17 00:42:21,468 [ scc.git] DEBUG ## Unique users: [] 2026-05-17 00:42:21,468 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:21,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:21,471 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-17 00:42:21,507 [ scc.git] DEBUG Get sha1 of %s 2026-05-17 00:42:21,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-17 00:42:21,509 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:21,545 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:21,549 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdc0c8cd0> has no local changes 2026-05-17 00:42:21,549 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:21,554 [ scc.git] DEBUG [detached HEAD 542ca08] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:21,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:21,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-17 00:42:21,623 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-05-17 00:42:21,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:21,898 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-05-17 00:42:21,900 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-05-17 00:42:22,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:22,339 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-05-17 00:42:22,341 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-05-17 00:42:22,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:22,774 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-05-17 00:42:22,776 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-05-17 00:42:23,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:23,206 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-05-17 00:42:23,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:23,654 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-05-17 00:42:23,656 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-05-17 00:42:24,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:24,094 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-05-17 00:42:24,096 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-05-17 00:42:24,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:24,541 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-05-17 00:42:24,543 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-05-17 00:42:24,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:24,973 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-05-17 00:42:24,975 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-05-17 00:42:25,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:25,404 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-05-17 00:42:25,406 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-05-17 00:42:25,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:25,826 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-05-17 00:42:25,828 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-05-17 00:42:26,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:26,258 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-05-17 00:42:26,260 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-05-17 00:42:26,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:26,688 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-05-17 00:42:26,690 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-05-17 00:42:27,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:27,121 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-05-17 00:42:27,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:27,565 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-05-17 00:42:27,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:27,993 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-05-17 00:42:27,995 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-05-17 00:42:28,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:28,433 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-05-17 00:42:28,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:28,861 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-05-17 00:42:29,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:29,287 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-05-17 00:42:29,289 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-05-17 00:42:29,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:29,717 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-05-17 00:42:29,718 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-05-17 00:42:30,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:30,160 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-05-17 00:42:30,162 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-05-17 00:42:30,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:30,595 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-05-17 00:42:30,597 [ scc.config] DEBUG Found submodule.scripts.url 2026-05-17 00:42:31,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-17 00:42:31,032 [ scc.config] DEBUG Found submodule.scripts.branch 2026-05-17 00:42:31,032 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-17 00:42:31,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3fdcba4d50> has local changes 2026-05-17 00:42:31,107 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..6ffb01dc Previously merged: - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..0b7eaf7 Previously merged: - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#143 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/143/)' 2026-05-17 00:42:31,119 [ scc.git] DEBUG [detached HEAD 88be6ca] merge master -Dorg -Ssuccess-only 2026-05-17 00:42:31,119 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-05-17 00:42:31,119 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-17 00:42:31,119 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,119 [ scc.merge] INFO 2026-05-17 00:42:31,119 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,119 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-17 00:42:31,119 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-17 00:42:31,119 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-17 00:42:31,119 [ scc.merge] INFO 2026-05-17 00:42:31,119 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-05-17 00:42:31,119 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,119 [ scc.merge] INFO 2026-05-17 00:42:31,119 [ scc.merge] INFO 2026-05-17 00:42:31,119 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-05-17 00:42:31,119 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,119 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-05-17 00:42:31,119 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,119 [ scc.merge] INFO 2026-05-17 00:42:31,119 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,120 [ scc.merge] INFO 2026-05-17 00:42:31,120 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-05-17 00:42:31,120 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-05-17 00:42:31,120 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-05-17 00:42:31,120 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-05-17 00:42:31,120 [ scc.merge] INFO 2026-05-17 00:42:31,120 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-05-17 00:42:31,120 [ scc.merge] INFO 2026-05-17 00:42:31,120 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-05-17 00:42:31,120 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' (status: failure) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-05-17 00:42:31,120 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-05-17 00:42:31,120 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,120 [ scc.merge] INFO 2026-05-17 00:42:31,120 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-05-17 00:42:31,120 [ scc.merge] INFO 2026-05-17 00:42:31,120 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,120 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-17 00:42:31,121 [ scc.merge] INFO 2026-05-17 00:42:31,121 [ scc.merge] INFO Repository: ome/omero-figure 2026-05-17 00:42:31,121 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-05-17 00:42:31,121 [ scc.merge] INFO Updating 9cc36cde..6ffb01dc 2026-05-17 00:42:31,121 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-05-17 00:42:31,121 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-05-17 00:42:31,122 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Repository: ome/omero-gallery 2026-05-17 00:42:31,122 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-17 00:42:31,122 [ scc.merge] INFO 2026-05-17 00:42:31,122 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-05-17 00:42:31,122 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-05-17 00:42:31,122 [ scc.merge] INFO Updating 7a798ce..0b7eaf7 2026-05-17 00:42:31,122 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-05-17 00:42:31,122 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Repository: ome/omero-mapr 2026-05-17 00:42:31,123 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-05-17 00:42:31,123 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Repository: ome/omero-metadata 2026-05-17 00:42:31,123 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-05-17 00:42:31,123 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-17 00:42:31,123 [ scc.merge] INFO 2026-05-17 00:42:31,123 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-17 00:42:31,123 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Repository: ome/omero-parade 2026-05-17 00:42:31,124 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-05-17 00:42:31,124 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-05-17 00:42:31,124 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Repository: ome/omero-rois 2026-05-17 00:42:31,124 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-17 00:42:31,124 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-05-17 00:42:31,124 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Repository: ome/omero-signup 2026-05-17 00:42:31,124 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-17 00:42:31,124 [ scc.merge] INFO 2026-05-17 00:42:31,124 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-05-17 00:42:31,124 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-05-17 00:42:31,124 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-05-17 00:42:31,124 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-05-17 00:42:31,124 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: ome/omero-upload 2026-05-17 00:42:31,125 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-05-17 00:42:31,125 [ scc.merge] INFO Updating deab817..160d894 2026-05-17 00:42:31,125 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-05-17 00:42:31,125 [ scc.merge] INFO Excluded PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-05-17 00:42:31,125 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-05-17 00:42:31,125 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-05-17 00:42:31,125 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-05-17 00:42:31,125 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Merged PRs: 2026-05-17 00:42:31,125 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,125 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-05-17 00:42:31,125 [ scc.merge] INFO Already up to date. 2026-05-17 00:42:31,125 [ scc.merge] INFO 2026-05-17 00:42:31,126 [ scc.merge] INFO 2026-05-17 00:42:31,126 [ scc.merge] INFO Repository: ome/scripts 2026-05-17 00:42:31,126 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-05-17 00:42:31,126 [ scc.merge] INFO Previously merged: 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-05-17 00:42:31,126 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-05-17 00:42:31,126 [ scc.merge] INFO 2026-05-17 00:42:31,126 [ scc.merge] INFO 2026-05-17 00:42:31,126 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-17 00:42:31,126 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-17 00:42:31,128 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-17 00:42:31,130 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-17 00:42:31,132 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-17 00:42:31,134 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,136 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-17 00:42:31,137 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-17 00:42:31,139 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-17 00:42:31,141 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-17 00:42:31,143 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-17 00:42:31,145 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-17 00:42:31,147 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-17 00:42:31,149 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-17 00:42:31,151 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-17 00:42:31,153 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-17 00:42:31,156 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-17 00:42:31,158 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-17 00:42:31,160 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-17 00:42:31,162 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-17 00:42:31,164 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-17 00:42:31,166 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-17 00:42:31,168 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-17 00:42:31,170 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-17 00:42:31,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-17 00:42:31,172 [ scc.git] DEBUG Calling 'git remote' 2026-05-17 00:42:31,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD fcf5ae7] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 8321976] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-17 00:43:19,405 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-17 00:43:29,143 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-17 00:43:31,674 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-17 00:43:36,588 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-17 00:44:23,118 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS