Started by upstream project "Trigger" build number 206 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 182 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.12.1-py3-none-any.whl.metadata (4.1 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.15-py3-none-any.whl.metadata (7.7 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.4.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.12.1-py3-none-any.whl (29 kB) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB) Using cached idna-3.15-py3-none-any.whl (72 kB) Using cached certifi-2026.4.22-py3-none-any.whl (135 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.4.22 cffi-2.0.0 charset_normalizer-3.4.7 cryptography-48.0.0 future-1.0.0 idna-3.15 pycparser-3.0 pyjwt-2.12.1 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-05-20 00:43:41,603 [ scc.config] DEBUG Found github.token 2026-05-20 00:43:41,605 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-20 00:43:41,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:43:42,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:43:42,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-20 00:43:42,713 [ scc.gh] DEBUG 4729 remaining from 5000 (Reset at 01:05 2026-05-20 00:43:42,713 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:43:42,715 [ scc.git] DEBUG Check current status 2026-05-20 00:43:42,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:43:42,718 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-20 00:43:42,718 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:43:42,764 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-20 00:43:42,767 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-20 00:43:42,770 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-20 00:43:42,773 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-20 00:43:42,777 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-20 00:43:42,780 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-20 00:43:42,783 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-20 00:43:42,786 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-20 00:43:42,788 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-20 00:43:42,791 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-20 00:43:42,794 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-20 00:43:42,796 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-20 00:43:42,800 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-20 00:43:42,802 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-20 00:43:42,805 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-20 00:43:42,808 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-20 00:43:42,810 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-20 00:43:42,813 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-20 00:43:42,816 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-20 00:43:42,818 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-20 00:43:42,821 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-20 00:43:42,824 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-20 00:43:42,827 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:43:43,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-20 00:43:43,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:43:44,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:43:44,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:43:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:43:45,194 [ scc.git] DEBUG Resetting... 2026-05-20 00:43:45,194 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-20 00:43:45,202 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-20 00:43:45,202 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-20 00:43:45,297 [ scc.git] DEBUG Check current status 2026-05-20 00:43:45,297 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:43:45,299 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-20 00:43:45,300 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:43:45,344 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-20 00:43:45,346 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-20 00:43:45,349 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-20 00:43:45,352 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-20 00:43:45,357 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-20 00:43:45,359 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-20 00:43:45,362 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-20 00:43:45,365 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-20 00:43:45,368 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-20 00:43:45,370 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-20 00:43:45,373 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-20 00:43:45,375 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-20 00:43:45,379 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-20 00:43:45,381 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-20 00:43:45,384 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-20 00:43:45,387 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-20 00:43:45,389 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-20 00:43:45,392 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-20 00:43:45,394 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-20 00:43:45,397 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-20 00:43:45,399 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-20 00:43:45,402 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-20 00:43:45,403 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-20 00:43:45,404 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-20 00:43:45,404 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-20 00:43:45,404 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-20 00:43:45,404 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-20 00:43:45,404 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:43:45,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-20 00:43:46,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-20 00:43:46,230 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:43:46,230 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-20 00:43:46,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-20 00:43:46,710 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:43:46,710 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-20 00:43:47,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-20 00:43:47,212 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:43:47,212 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-20 00:43:47,212 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:43:47,212 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:43:47,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:47,215 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:43:47,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:43:47,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:43:47,220 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:43:47,222 [ scc.git] DEBUG Already up to date. 2026-05-20 00:43:47,222 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-20 00:43:47,577 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:43:47,577 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-20 00:43:47,580 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-20 00:43:47,925 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:43:47,925 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-20 00:43:47,929 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-20 00:43:48,255 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:43:48,255 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-20 00:43:48,259 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:43:48,259 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:43:48,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:48,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-20 00:43:48,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:48,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-20 00:43:48,280 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:43:48,283 [ scc.git] DEBUG scripts | 2 +- 2026-05-20 00:43:48,283 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:43:48,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:43:48,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-20 00:43:48,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:48,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-20 00:43:48,542 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:43:48,544 [ scc.git] DEBUG omero-figure | 2 +- 2026-05-20 00:43:48,544 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:43:48,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:43:48,915 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-20 00:43:48,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:48,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-20 00:43:48,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:43:48,938 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-05-20 00:43:48,938 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:43:49,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:43:49,348 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:43:49,416 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-20 00:43:49,442 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-20 00:43:49,455 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-20 00:43:49,456 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:43:49,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:43:49,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:43:50,045 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f520ee60a10> has no local changes 2026-05-20 00:43:50,045 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:43:50,119 [ scc.git] DEBUG [detached HEAD bf9ae7b] merge master -Dorg -Snone 2026-05-20 00:43:50,120 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-20 00:43:50,120 [ scc.merge] INFO Already up to date. 2026-05-20 00:43:50,120 [ scc.merge] INFO 2026-05-20 00:43:50,120 [ scc.merge] INFO Merged PRs: 2026-05-20 00:43:50,120 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-20 00:43:50,120 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-20 00:43:50,120 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-20 00:43:50,120 [ scc.merge] INFO 2026-05-20 00:43:50,120 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-20 00:43:50,120 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '6ffb01dc7cfbdeec4b8a8ecf5beb46361a32b9fc' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/webpack-dev-server-5.2.4 -> origin/dependabot/npm_and_yarn/webpack-dev-server-5.2.4 Submodule path 'omero-iviewer': checked out '0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-05-20 00:43:59,918 [ scc.config] DEBUG Found github.token 2026-05-20 00:43:59,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-20 00:44:00,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:44:00,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:44:01,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-20 00:44:01,158 [ scc.gh] DEBUG 4725 remaining from 5000 (Reset at 01:05 2026-05-20 00:44:01,159 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:01,161 [ scc.git] DEBUG Check current status 2026-05-20 00:44:01,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:01,164 [ scc.git] DEBUG bf9ae7b merge master -Dorg -Snone 2026-05-20 00:44:01,164 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:01,210 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-20 00:44:01,212 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-20 00:44:01,215 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-05-20 00:44:01,218 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-05-20 00:44:01,223 [ scc.git] DEBUG +6ffb01dc7cfbdeec4b8a8ecf5beb46361a32b9fc omero-figure (v8.0.1.rc2-2-g6ffb01dc) 2026-05-20 00:44:01,225 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-20 00:44:01,228 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-20 00:44:01,232 [ scc.git] DEBUG +0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4 omero-iviewer (v0.16.0-63-g0b7eaf7) 2026-05-20 00:44:01,235 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-20 00:44:01,238 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-05-20 00:44:01,241 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-20 00:44:01,243 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-20 00:44:01,246 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-05-20 00:44:01,248 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-20 00:44:01,251 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-05-20 00:44:01,254 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-20 00:44:01,256 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-05-20 00:44:01,259 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-05-20 00:44:01,261 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-20 00:44:01,264 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-20 00:44:01,267 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-20 00:44:01,270 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-05-20 00:44:01,273 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:01,273 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-05-20 00:44:01,274 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-05-20 00:44:01,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-20 00:44:02,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:02,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:03,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:03,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:03,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:03,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-20 00:44:03,971 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:03,974 [ scc.git] DEBUG Check current status 2026-05-20 00:44:03,974 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:03,976 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-05-20 00:44:03,976 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:04,014 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:04,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-05-20 00:44:05,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:05,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:05,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:06,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:06,453 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:06,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:06,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-20 00:44:06,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:06,493 [ scc.git] DEBUG Check current status 2026-05-20 00:44:06,493 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:06,495 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-05-20 00:44:06,495 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:06,534 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:06,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-05-20 00:44:07,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:07,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:08,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:08,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:08,917 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:08,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:08,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-20 00:44:08,954 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:08,956 [ scc.git] DEBUG Check current status 2026-05-20 00:44:08,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:08,958 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-05-20 00:44:08,958 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:08,997 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:09,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-05-20 00:44:09,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:10,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:10,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:11,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:11,467 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:11,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:11,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-20 00:44:11,505 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:11,507 [ scc.git] DEBUG Check current status 2026-05-20 00:44:11,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:11,509 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-20 00:44:11,510 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:11,548 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:12,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-05-20 00:44:12,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:13,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:13,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:13,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:13,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:14,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:14,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-20 00:44:14,005 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:14,007 [ scc.git] DEBUG Check current status 2026-05-20 00:44:14,007 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:14,010 [ scc.git] DEBUG 6ffb01dc Merge pull request #688 from will-moore/handle_app_images_param 2026-05-20 00:44:14,010 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:14,048 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:14,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-05-20 00:44:15,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:15,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:16,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:16,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:16,631 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:16,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:16,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-20 00:44:16,668 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:16,670 [ scc.git] DEBUG Check current status 2026-05-20 00:44:16,670 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:16,672 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-05-20 00:44:16,673 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:16,710 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:17,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-05-20 00:44:17,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:18,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:18,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:19,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:19,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:19,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:19,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-20 00:44:19,140 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:19,142 [ scc.git] DEBUG Check current status 2026-05-20 00:44:19,142 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:19,144 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-05-20 00:44:19,145 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:19,183 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:19,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-05-20 00:44:20,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:20,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:21,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:21,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:21,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:21,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:21,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-20 00:44:21,630 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:21,632 [ scc.git] DEBUG Check current status 2026-05-20 00:44:21,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:21,634 [ scc.git] DEBUG 0b7eaf7 Merge pull request #526 from will-moore/keyboard_panning 2026-05-20 00:44:21,634 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:21,671 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:22,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-05-20 00:44:22,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:23,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:23,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:24,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:24,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:24,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:24,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-20 00:44:24,047 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:24,048 [ scc.git] DEBUG Check current status 2026-05-20 00:44:24,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:24,051 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-05-20 00:44:24,051 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:24,087 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:24,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-05-20 00:44:25,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:25,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:26,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:26,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:26,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:26,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:26,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-20 00:44:26,512 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:26,514 [ scc.git] DEBUG Check current status 2026-05-20 00:44:26,514 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:26,517 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-20 00:44:26,517 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:26,553 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:27,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-05-20 00:44:27,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:27,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:28,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:28,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:28,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:28,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:28,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-20 00:44:28,954 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:28,956 [ scc.git] DEBUG Check current status 2026-05-20 00:44:28,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:28,958 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-05-20 00:44:28,959 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:28,996 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:29,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-05-20 00:44:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:30,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:30,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:31,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:31,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:31,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:31,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-20 00:44:31,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:31,461 [ scc.git] DEBUG Check current status 2026-05-20 00:44:31,461 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:31,463 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-05-20 00:44:31,463 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:31,500 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:31,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-05-20 00:44:32,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:32,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:33,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:33,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:33,870 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:33,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:33,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-20 00:44:33,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:33,911 [ scc.git] DEBUG Check current status 2026-05-20 00:44:33,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:33,913 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-05-20 00:44:33,913 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:33,951 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:34,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-05-20 00:44:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:35,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:35,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:36,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:36,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:36,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:36,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-20 00:44:36,406 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:36,408 [ scc.git] DEBUG Check current status 2026-05-20 00:44:36,408 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:36,410 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-05-20 00:44:36,411 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:36,450 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:36,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-05-20 00:44:37,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:37,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:38,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:38,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:38,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:38,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:38,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-20 00:44:38,885 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:38,887 [ scc.git] DEBUG Check current status 2026-05-20 00:44:38,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:38,889 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-05-20 00:44:38,889 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:38,927 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:39,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-20 00:44:39,275 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-20 00:44:39,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-05-20 00:44:40,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:40,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:40,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:41,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:41,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:41,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:41,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-20 00:44:41,507 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:41,509 [ scc.git] DEBUG Check current status 2026-05-20 00:44:41,509 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:41,511 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-05-20 00:44:41,511 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:41,550 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:42,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-05-20 00:44:42,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:43,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:43,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:44,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:44,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:44,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:44,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-20 00:44:44,277 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:44,279 [ scc.git] DEBUG Check current status 2026-05-20 00:44:44,279 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:44,281 [ scc.git] DEBUG 160d894 Fix display of code 2026-05-20 00:44:44,282 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:44,319 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:44,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-05-20 00:44:45,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:45,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:46,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:46,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:46,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:46,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:46,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-20 00:44:46,694 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:46,696 [ scc.git] DEBUG Check current status 2026-05-20 00:44:46,696 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:46,698 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-20 00:44:46,698 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:46,735 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:46,736 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-05-20 00:44:47,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-05-20 00:44:47,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:48,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:48,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:49,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:49,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:49,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:49,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-20 00:44:49,159 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:49,161 [ scc.git] DEBUG Check current status 2026-05-20 00:44:49,161 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:49,164 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-05-20 00:44:49,164 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:49,203 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:49,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-20 00:44:49,538 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-20 00:44:49,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-05-20 00:44:50,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:50,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:51,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:51,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:51,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:51,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:51,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-20 00:44:51,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:51,757 [ scc.git] DEBUG Check current status 2026-05-20 00:44:51,757 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:51,759 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-05-20 00:44:51,759 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:51,799 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:52,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-20 00:44:52,136 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-20 00:44:52,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-05-20 00:44:52,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:53,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:53,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:54,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:54,370 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:54,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:54,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-20 00:44:54,408 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:54,410 [ scc.git] DEBUG Check current status 2026-05-20 00:44:54,410 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:54,412 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-05-20 00:44:54,412 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:54,450 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:54,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-05-20 00:44:55,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:55,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:56,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:56,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:56,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:56,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:56,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-20 00:44:56,924 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-20 00:44:56,926 [ scc.git] DEBUG Check current status 2026-05-20 00:44:56,926 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:56,928 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-05-20 00:44:56,928 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:56,966 [ scc.config] DEBUG Found remote.origin.url 2026-05-20 00:44:56,966 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-05-20 00:44:57,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-20 00:44:57,297 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-20 00:44:57,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-05-20 00:44:58,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-20 00:44:58,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-20 00:44:59,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-20 00:44:59,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-20 00:44:59,524 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:44:59,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:44:59,561 [ scc.git] DEBUG Resetting... 2026-05-20 00:44:59,562 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-20 00:44:59,569 [ scc.git] DEBUG HEAD is now at bf9ae7b merge master -Dorg -Snone 2026-05-20 00:44:59,569 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-20 00:44:59,621 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-05-20 00:44:59,637 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-05-20 00:44:59,685 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-20 00:44:59,718 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-20 00:44:59,732 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-05-20 00:44:59,749 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-05-20 00:44:59,763 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-05-20 00:44:59,777 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-05-20 00:44:59,787 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-05-20 00:44:59,811 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-20 00:44:59,814 [ scc.git] DEBUG Check current status 2026-05-20 00:44:59,814 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-20 00:44:59,816 [ scc.git] DEBUG bf9ae7b merge master -Dorg -Snone 2026-05-20 00:44:59,816 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-20 00:44:59,860 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-20 00:44:59,862 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-20 00:44:59,865 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-20 00:44:59,868 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-20 00:44:59,873 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-05-20 00:44:59,875 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-20 00:44:59,878 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-20 00:44:59,881 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-05-20 00:44:59,884 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-20 00:44:59,887 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-20 00:44:59,889 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-20 00:44:59,892 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-20 00:44:59,895 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-20 00:44:59,898 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-20 00:44:59,901 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-20 00:44:59,903 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-20 00:44:59,906 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-20 00:44:59,908 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-20 00:44:59,911 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-20 00:44:59,913 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-20 00:44:59,916 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-20 00:44:59,919 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-05-20 00:44:59,920 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-20 00:44:59,920 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-20 00:44:59,920 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-20 00:44:59,920 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-20 00:44:59,921 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-20 00:44:59,921 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-05-20 00:44:59,921 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:45:00,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-20 00:45:00,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-20 00:45:00,734 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:45:01,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:01,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:02,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:02,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:45:02,926 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-20 00:45:03,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-20 00:45:03,412 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:45:03,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:04,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:05,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:05,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:45:05,488 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-20 00:45:05,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-20 00:45:05,995 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:45:06,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:07,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:07,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:08,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:45:08,288 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-20 00:45:08,288 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:45:08,288 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:08,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:08,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:45:08,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:45:08,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:45:08,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:45:08,298 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:08,298 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-20 00:45:08,677 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:45:08,677 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-20 00:45:08,682 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-20 00:45:09,034 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:45:09,034 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-20 00:45:09,038 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-20 00:45:09,353 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-20 00:45:09,354 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-20 00:45:09,358 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:45:09,358 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:09,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:09,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-20 00:45:09,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:09,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-20 00:45:09,367 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:09,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:45:09,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-20 00:45:09,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:09,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-20 00:45:09,567 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:10,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:45:10,009 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-20 00:45:10,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:10,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-20 00:45:10,016 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:10,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:45:10,447 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:45:10,497 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:10,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:10,499 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:45:10,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-05-20 00:45:10,917 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:45:10,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-20 00:45:10,917 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:10,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:10,920 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:45:10,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:45:10,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:45:10,925 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:45:10,939 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:10,939 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:45:10,939 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:10,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:10,941 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:45:10,980 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:10,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:10,982 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:45:11,019 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:45:11,022 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d692ed0> has no local changes 2026-05-20 00:45:11,022 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:45:11,027 [ scc.git] DEBUG [detached HEAD 5b75ad1] merge master -Dorg -Ssuccess-only 2026-05-20 00:45:11,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:45:11,028 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:45:11,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-05-20 00:45:12,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-05-20 00:45:12,002 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:45:12,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:13,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:13,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:14,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:14,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:45:14,804 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:45:15,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-05-20 00:45:15,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-05-20 00:45:15,809 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:45:15,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-20 00:45:15,809 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:15,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:15,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:45:15,814 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:45:15,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:45:15,817 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:45:15,820 [ scc.git] DEBUG Already up to date. 2026-05-20 00:45:15,820 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-05-20 00:45:16,179 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-05-20 00:45:16,179 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-05-20 00:45:16,183 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:45:16,183 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:16,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:16,186 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-20 00:45:16,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:16,190 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-20 00:45:16,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:45:16,199 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:45:16,199 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:45:16,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:45:16,388 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:45:16,425 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:16,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:16,428 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:45:16,465 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:45:16,468 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d66a290> has no local changes 2026-05-20 00:45:16,468 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:45:16,474 [ scc.git] DEBUG [detached HEAD b478bd6] merge master -Dorg -Ssuccess-only 2026-05-20 00:45:16,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:45:16,474 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:45:17,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-05-20 00:45:17,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-05-20 00:45:18,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-05-20 00:45:18,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:19,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:19,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:20,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:20,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:45:20,735 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-05-20 00:45:21,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-05-20 00:45:21,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-05-20 00:45:21,740 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:45:21,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-20 00:45:21,741 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:21,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:21,743 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:45:21,745 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:45:21,745 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:45:21,748 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:45:21,755 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-05-20 00:45:22,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-05-20 00:45:23,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-05-20 00:45:23,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-05-20 00:45:24,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-05-20 00:45:24,534 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-05-20 00:45:25,083 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-05-20 00:45:25,083 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-05-20 00:45:25,086 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:45:25,087 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:25,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:25,089 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-20 00:45:25,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:25,094 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-20 00:45:25,118 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-05-20 00:45:25,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:45:25,122 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-05-20 00:45:25,122 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-05-20 00:45:25,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:45:25,308 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:45:25,347 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:25,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:25,349 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:45:25,386 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:45:25,389 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d6bc4d0> has no local changes 2026-05-20 00:45:25,389 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:45:25,395 [ scc.git] DEBUG [detached HEAD b8f68a5] merge master -Dorg -Ssuccess-only 2026-05-20 00:45:25,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:45:25,395 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:45:25,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-05-20 00:45:26,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-05-20 00:45:27,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:27,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:28,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:28,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-05-20 00:45:29,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:29,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:30,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:30,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-05-20 00:45:31,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:31,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:32,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:32,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:33,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:33,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:34,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-05-20 00:45:34,396 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-05-20 00:45:34,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-05-20 00:45:35,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-05-20 00:45:36,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:36,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:37,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:37,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:38,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:38,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:39,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-05-20 00:45:39,214 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-20 00:45:39,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-05-20 00:45:40,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-05-20 00:45:40,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-05-20 00:45:41,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-05-20 00:45:41,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:42,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:43,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:43,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:44,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:44,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:45,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-05-20 00:45:45,219 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-20 00:45:45,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-05-20 00:45:46,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-05-20 00:45:46,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:47,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:48,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:45:48,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:49,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-05-20 00:45:49,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-20 00:45:50,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-05-20 00:45:50,211 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-05-20 00:45:50,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-05-20 00:45:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-05-20 00:45:51,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-05-20 00:45:52,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-05-20 00:45:52,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-05-20 00:45:53,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-05-20 00:45:53,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-05-20 00:45:54,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-05-20 00:45:54,172 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:45:54,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-20 00:45:54,173 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:45:54,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:45:54,175 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:45:54,177 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:45:54,177 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:45:54,180 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:45:54,192 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-05-20 00:45:54,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-05-20 00:45:55,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-05-20 00:45:56,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-05-20 00:45:56,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-05-20 00:45:57,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-05-20 00:45:58,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-05-20 00:45:58,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-05-20 00:45:59,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-05-20 00:46:00,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-05-20 00:46:01,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-05-20 00:46:01,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-05-20 00:46:02,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-05-20 00:46:02,506 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-05-20 00:46:02,910 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-20 00:46:02,910 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-05-20 00:46:02,913 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-05-20 00:46:03,346 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-20 00:46:03,346 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-05-20 00:46:03,349 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-05-20 00:46:03,665 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-20 00:46:03,665 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-05-20 00:46:03,669 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-05-20 00:46:03,953 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-20 00:46:03,953 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-05-20 00:46:03,957 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:46:03,957 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:03,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:03,959 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-20 00:46:03,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:03,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-20 00:46:04,058 [ scc.git] DEBUG Auto-merging README.rst 2026-05-20 00:46:04,058 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-05-20 00:46:04,058 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-05-20 00:46:04,059 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-05-20 00:46:04,059 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-20 00:46:04,059 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-20 00:46:04,059 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:46:04,059 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:46:04,062 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:04,066 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-20 00:46:04,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:04,249 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-20 00:46:04,253 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:04,255 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - src/omero_zarr/util.py - src/omero_zarr/masks.py - src/omero_zarr/raw_pixels.py - test/integration/clitest/test_export.py --conflicts 2026-05-20 00:46:04,257 [ scc.config] DEBUG Found github.token 2026-05-20 00:46:04,257 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-05-20 00:46:04,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-20 00:46:04,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:04,262 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-20 00:46:04,301 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-20 00:46:04,301 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-20 00:46:04,301 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-20 00:46:04,301 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-20 00:46:04,301 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:46:04,301 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:46:04,304 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:04,308 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-20 00:46:04,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:04,695 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-20 00:46:04,698 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:04,701 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-05-20 00:46:04,703 [ scc.config] DEBUG Found github.token 2026-05-20 00:46:04,703 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-05-20 00:46:04,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-20 00:46:04,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:04,708 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-20 00:46:04,821 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-20 00:46:04,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-05-20 00:46:04,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-05-20 00:46:04,822 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-05-20 00:46:04,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-05-20 00:46:04,822 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:46:04,822 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:46:04,825 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:04,829 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-20 00:46:05,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:05,137 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-20 00:46:05,141 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-20 00:46:05,143 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-05-20 00:46:05,145 [ scc.config] DEBUG Found github.token 2026-05-20 00:46:05,145 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-05-20 00:46:05,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-20 00:46:05,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:05,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-20 00:46:05,156 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:05,159 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-05-20 00:46:05,160 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-05-20 00:46:05,160 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-05-20 00:46:05,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:05,573 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:46:05,610 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:05,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:05,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:46:05,647 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:46:05,651 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d616390> has no local changes 2026-05-20 00:46:05,651 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:46:05,656 [ scc.git] DEBUG [detached HEAD dcd533f] merge master -Dorg -Ssuccess-only 2026-05-20 00:46:05,657 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:46:05,657 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:46:06,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-05-20 00:46:06,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686 HTTP/1.1" 200 None 2026-05-20 00:46:07,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686/comments HTTP/1.1" 200 None 2026-05-20 00:46:07,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:08,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:46:08,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:46:09,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:09,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fd09cda763a6c8192985a9d4e045eb3903f04d15?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:46:09,907 [ scc.repo] DEBUG - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-20 00:46:10,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/681 HTTP/1.1" 200 None 2026-05-20 00:46:10,395 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:46:11,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:11,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:46:12,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:46:12,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:13,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6838d4ffce610fded2cb7c41dc4e01ea7d485846?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:46:13,332 [ scc.repo] DEBUG - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-20 00:46:13,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-05-20 00:46:14,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-05-20 00:46:14,408 [ scc.repo] DEBUG # ... Include label: include 2026-05-20 00:46:14,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:15,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:46:16,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:46:16,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:16,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:46:16,998 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-20 00:46:17,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-05-20 00:46:18,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-05-20 00:46:18,079 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:46:18,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-20 00:46:18,080 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:18,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:18,082 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:46:18,085 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:46:18,085 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:46:18,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:46:18,145 [ scc.git] DEBUG Updating 9cc36cde..6ffb01dc 2026-05-20 00:46:18,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-05-20 00:46:19,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-05-20 00:46:20,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-05-20 00:46:20,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-05-20 00:46:21,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-05-20 00:46:22,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-05-20 00:46:22,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-05-20 00:46:23,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-05-20 00:46:24,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-05-20 00:46:24,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-05-20 00:46:25,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-05-20 00:46:26,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-05-20 00:46:26,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-05-20 00:46:27,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-05-20 00:46:28,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-05-20 00:46:28,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-05-20 00:46:29,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-05-20 00:46:30,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-05-20 00:46:30,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-05-20 00:46:31,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-05-20 00:46:32,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-05-20 00:46:32,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-05-20 00:46:33,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-05-20 00:46:34,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-05-20 00:46:34,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-05-20 00:46:35,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-05-20 00:46:36,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-05-20 00:46:36,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-05-20 00:46:37,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-05-20 00:46:38,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-05-20 00:46:39,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-05-20 00:46:40,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-05-20 00:46:40,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-05-20 00:46:41,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-05-20 00:46:42,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-05-20 00:46:42,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-05-20 00:46:43,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-05-20 00:46:44,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-05-20 00:46:44,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-05-20 00:46:45,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-05-20 00:46:46,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-05-20 00:46:47,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-05-20 00:46:47,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-05-20 00:46:48,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-05-20 00:46:49,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-05-20 00:46:49,149 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-05-20 00:46:49,642 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-20 00:46:49,642 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-05-20 00:46:49,645 [ scc.git] DEBUG Calling 'git fetch origin pull/681/head' 2026-05-20 00:46:49,988 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-20 00:46:49,988 [ scc.git] DEBUG * branch refs/pull/681/head -> FETCH_HEAD 2026-05-20 00:46:49,992 [ scc.git] DEBUG Calling 'git fetch origin pull/686/head' 2026-05-20 00:46:50,587 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-20 00:46:50,587 [ scc.git] DEBUG * branch refs/pull/686/head -> FETCH_HEAD 2026-05-20 00:46:50,591 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:46:50,591 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:50,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:50,593 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-20 00:46:50,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:50,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-20 00:46:50,691 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-05-20 00:46:50,691 [ scc.git] DEBUG Auto-merging src/index.html 2026-05-20 00:46:50,691 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-05-20 00:46:50,691 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:50,697 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-05-20 00:46:50,697 [ scc.git] DEBUG src/index.html | 11 ++ 2026-05-20 00:46:50,697 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-05-20 00:46:50,697 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-05-20 00:46:50,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:50,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-20 00:46:50,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:50,935 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 681 (Bump dompurify from 3.3.2 to 3.4.0) 6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-20 00:46:51,011 [ scc.git] DEBUG Auto-merging package.json 2026-05-20 00:46:51,012 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:51,016 [ scc.git] DEBUG package-lock.json | 11 ++++------- 2026-05-20 00:46:51,016 [ scc.git] DEBUG package.json | 2 +- 2026-05-20 00:46:51,016 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 8 deletions(-) 2026-05-20 00:46:51,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:51,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-20 00:46:51,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:51,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 686 (Add note about zarr etc requirement for export script with zarr images) fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-20 00:46:51,355 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:51,358 [ scc.git] DEBUG README.rst | 40 +++++++++++++++++++++------------------- 2026-05-20 00:46:51,358 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 19 deletions(-) 2026-05-20 00:46:51,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:51,772 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:46:51,810 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:51,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:51,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:46:51,847 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:46:51,852 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d6db3d0> has no local changes 2026-05-20 00:46:51,852 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..6ffb01dc Previously merged: - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:46:51,859 [ scc.git] DEBUG [detached HEAD afef6841] merge master -Dorg -Ssuccess-only 2026-05-20 00:46:51,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:46:51,860 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:46:52,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-05-20 00:46:52,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-05-20 00:46:52,821 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:46:53,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:54,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:46:54,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:46:55,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:55,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:46:55,660 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:46:56,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-05-20 00:46:56,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-05-20 00:46:57,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:57,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:46:58,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-20 00:46:58,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:46:58,682 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-05-20 00:46:58,682 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:46:58,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-20 00:46:58,682 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:58,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:58,684 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:46:58,686 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:46:58,686 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:46:58,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:46:58,691 [ scc.git] DEBUG Already up to date. 2026-05-20 00:46:58,691 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-05-20 00:46:59,077 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-20 00:46:59,077 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-05-20 00:46:59,081 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-05-20 00:46:59,432 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-20 00:46:59,432 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-05-20 00:46:59,435 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:46:59,435 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:46:59,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:59,438 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-20 00:46:59,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:59,442 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-20 00:46:59,512 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-05-20 00:46:59,513 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:59,515 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-05-20 00:46:59,515 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-05-20 00:46:59,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:46:59,703 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-20 00:46:59,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:46:59,707 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-20 00:46:59,714 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:46:59,717 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:46:59,717 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:47:00,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:00,147 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:47:00,185 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:47:00,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:00,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:47:00,223 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:47:00,226 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d6bfcd0> has no local changes 2026-05-20 00:47:00,226 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:47:00,231 [ scc.git] DEBUG [detached HEAD 626b298] merge master -Dorg -Ssuccess-only 2026-05-20 00:47:00,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:47:00,232 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:47:00,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-05-20 00:47:01,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-05-20 00:47:01,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-05-20 00:47:02,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-05-20 00:47:02,275 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:02,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:03,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:03,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:04,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:04,451 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-20 00:47:05,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-05-20 00:47:05,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-05-20 00:47:06,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-05-20 00:47:06,169 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:06,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:07,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:07,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:08,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:08,370 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-20 00:47:08,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-05-20 00:47:08,852 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:09,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:10,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:10,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:10,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:10,961 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-20 00:47:11,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-05-20 00:47:11,470 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:12,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:12,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:13,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:13,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:13,564 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-20 00:47:14,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-05-20 00:47:14,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-05-20 00:47:14,575 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:15,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:15,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:16,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:16,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:16,702 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-20 00:47:17,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-05-20 00:47:17,180 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:17,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:18,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:18,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:19,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:19,277 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-20 00:47:19,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-05-20 00:47:19,919 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:20,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:21,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:21,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:22,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:22,043 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-20 00:47:22,043 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:47:22,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-20 00:47:22,044 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:47:22,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:22,046 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:47:22,048 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:47:22,048 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:47:22,051 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:47:22,053 [ scc.git] DEBUG Already up to date. 2026-05-20 00:47:22,053 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-05-20 00:47:22,392 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:22,392 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-05-20 00:47:22,396 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-05-20 00:47:22,741 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:22,741 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-05-20 00:47:22,745 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-05-20 00:47:23,091 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:23,091 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-05-20 00:47:23,094 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-05-20 00:47:23,440 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:23,440 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-05-20 00:47:23,444 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-05-20 00:47:23,794 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:23,794 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-05-20 00:47:23,798 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-05-20 00:47:24,146 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:24,146 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-05-20 00:47:24,150 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-05-20 00:47:24,502 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-20 00:47:24,502 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-05-20 00:47:24,506 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:47:24,506 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:47:24,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:24,508 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-20 00:47:24,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:24,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-20 00:47:24,521 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:47:24,525 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-20 00:47:24,525 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-20 00:47:24,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:24,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-20 00:47:24,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:24,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-20 00:47:24,806 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:24,807 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:47:24,811 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-05-20 00:47:24,811 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-05-20 00:47:25,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:25,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-20 00:47:25,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:25,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-20 00:47:25,261 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:25,261 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-20 00:47:25,261 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:47:25,261 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:47:25,264 [ scc.git] DEBUG Calling 'git reset --hard 5ba7ca48a50d8c8dfa62eb351432d3d83da54e7b' 2026-05-20 00:47:25,268 [ scc.git] DEBUG HEAD is now at 5ba7ca4 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-05-20 00:47:25,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:25,615 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-20 00:47:25,618 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-20 00:47:25,621 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-05-20 00:47:25,623 [ scc.config] DEBUG Found github.token 2026-05-20 00:47:25,623 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-05-20 00:47:25,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-20 00:47:25,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:25,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-20 00:47:25,698 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:25,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:47:25,703 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-05-20 00:47:25,703 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-05-20 00:47:26,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:26,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-20 00:47:26,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:26,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-20 00:47:26,076 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:26,077 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:47:26,081 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-05-20 00:47:26,081 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-05-20 00:47:26,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:26,512 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-20 00:47:26,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:26,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-20 00:47:26,585 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:26,585 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-20 00:47:26,585 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:47:26,586 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:47:26,588 [ scc.git] DEBUG Calling 'git reset --hard d44f57c1b1bb68f61f6b8a6c8e974342ad283d2a' 2026-05-20 00:47:26,593 [ scc.git] DEBUG HEAD is now at d44f57c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-20 00:47:26,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:26,957 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-20 00:47:26,960 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-20 00:47:26,962 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-05-20 00:47:26,964 [ scc.config] DEBUG Found github.token 2026-05-20 00:47:26,964 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-05-20 00:47:26,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-20 00:47:26,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:26,969 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-20 00:47:26,998 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:47:26,998 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-20 00:47:26,998 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:47:26,998 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:47:27,001 [ scc.git] DEBUG Calling 'git reset --hard d44f57c1b1bb68f61f6b8a6c8e974342ad283d2a' 2026-05-20 00:47:27,005 [ scc.git] DEBUG HEAD is now at d44f57c merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-20 00:47:27,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:47:27,399 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-20 00:47:27,402 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-20 00:47:27,404 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-05-20 00:47:27,406 [ scc.config] DEBUG Found github.token 2026-05-20 00:47:27,406 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-05-20 00:47:27,406 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:47:27,443 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:47:27,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:27,445 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:47:27,480 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:47:27,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d6e8ed0> has no local changes 2026-05-20 00:47:27,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:47:27,491 [ scc.git] DEBUG [detached HEAD 10c7579] merge master -Dorg -Ssuccess-only 2026-05-20 00:47:27,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:47:27,491 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:47:28,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-05-20 00:47:28,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/530 HTTP/1.1" 200 None 2026-05-20 00:47:28,507 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:29,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/e11ffcc548b10e03fbfeba93c1682750a3fc0d4b?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:29,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/e11ffcc548b10e03fbfeba93c1682750a3fc0d4b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:30,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/e11ffcc548b10e03fbfeba93c1682750a3fc0d4b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:47:30,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/e11ffcc548b10e03fbfeba93c1682750a3fc0d4b?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:31,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/e11ffcc548b10e03fbfeba93c1682750a3fc0d4b?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:31,374 [ scc.repo] DEBUG - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-05-20 00:47:31,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/529 HTTP/1.1" 200 None 2026-05-20 00:47:32,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2088dfdaf01eeaef3f57e903713747f15ab59c0f?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:32,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2088dfdaf01eeaef3f57e903713747f15ab59c0f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:33,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2088dfdaf01eeaef3f57e903713747f15ab59c0f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:47:33,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2088dfdaf01eeaef3f57e903713747f15ab59c0f?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:34,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2088dfdaf01eeaef3f57e903713747f15ab59c0f?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:34,402 [ scc.repo] DEBUG - PR 529 will-moore 'Image id and roi id initial params' 2026-05-20 00:47:34,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/528 HTTP/1.1" 200 None 2026-05-20 00:47:34,905 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:47:35,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:36,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:36,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:47:37,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9d16e2d727cd57c2e6097612fbddffeab29e4f62?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:37,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9d16e2d727cd57c2e6097612fbddffeab29e4f62?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:37,793 [ scc.repo] DEBUG - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-05-20 00:47:38,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-05-20 00:47:38,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-05-20 00:47:38,806 [ scc.repo] DEBUG # ... Include label: include 2026-05-20 00:47:39,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:40,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:40,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:47:41,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:41,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:41,587 [ scc.repo] DEBUG - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-20 00:47:42,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-05-20 00:47:42,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-05-20 00:47:43,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-05-20 00:47:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-05-20 00:47:44,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-05-20 00:47:44,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-05-20 00:47:45,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-05-20 00:47:45,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-05-20 00:47:46,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-05-20 00:47:46,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:47,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:47,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:48,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:48,190 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-20 00:47:48,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-05-20 00:47:49,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-05-20 00:47:49,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:50,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:50,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:51,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:51,235 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-05-20 00:47:51,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-05-20 00:47:52,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-05-20 00:47:52,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:53,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:47:53,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-20 00:47:54,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a081a9f2892763bd49a7ad7ba425965150e76f97?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:47:54,368 [ scc.repo] DEBUG - PR 227 will-moore 'Vectortile investigation' 2026-05-20 00:47:54,369 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:47:54,369 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-20 00:47:54,369 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:47:54,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:47:54,371 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:47:54,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:47:54,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:47:54,377 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:47:54,409 [ scc.git] DEBUG Updating 7a798ce..0b7eaf7 2026-05-20 00:47:55,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-05-20 00:47:55,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-05-20 00:47:56,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-05-20 00:47:57,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-05-20 00:47:57,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-05-20 00:47:58,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-05-20 00:47:58,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-05-20 00:47:59,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-05-20 00:48:00,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-05-20 00:48:01,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-05-20 00:48:01,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-05-20 00:48:02,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-05-20 00:48:03,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-05-20 00:48:03,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-05-20 00:48:04,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-05-20 00:48:05,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-05-20 00:48:05,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-05-20 00:48:05,982 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2026-05-20 00:48:06,385 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:06,386 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2026-05-20 00:48:06,390 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-05-20 00:48:06,953 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:06,953 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-05-20 00:48:06,957 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-05-20 00:48:07,570 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:07,570 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-05-20 00:48:07,574 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2026-05-20 00:48:08,330 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:08,330 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2026-05-20 00:48:08,334 [ scc.git] DEBUG Calling 'git fetch origin pull/528/head' 2026-05-20 00:48:08,675 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:08,675 [ scc.git] DEBUG * branch refs/pull/528/head -> FETCH_HEAD 2026-05-20 00:48:08,679 [ scc.git] DEBUG Calling 'git fetch origin pull/529/head' 2026-05-20 00:48:09,653 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:09,653 [ scc.git] DEBUG * branch refs/pull/529/head -> FETCH_HEAD 2026-05-20 00:48:09,655 [ scc.git] DEBUG Calling 'git fetch origin pull/530/head' 2026-05-20 00:48:10,000 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-20 00:48:10,000 [ scc.git] DEBUG * branch refs/pull/530/head -> FETCH_HEAD 2026-05-20 00:48:10,004 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:10,004 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:10,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:10,007 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-20 00:48:10,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:10,017 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Vectortile investigation) a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-20 00:48:10,274 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-05-20 00:48:10,274 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-05-20 00:48:10,274 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-20 00:48:10,274 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:10,280 [ scc.git] DEBUG plugin/omero_iviewer/urls.py | 7 +- 2026-05-20 00:48:10,280 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 88 ++++++++++ 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/events/events.js | 2 + 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/model/regions_info.js | 37 +++- 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/regions/regions-list.js | 26 +++ 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/utils/constants.js | 6 + 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 48 +++++- 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 78 +++++++-- 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/format/OmeJSON.js | 79 +++++++++ 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/source/Regions.js | 56 ++++++ 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/source/TiledRegions.js | 277 ++++++++++++++++++++++++++++++ 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/utils/Regions.js | 51 ++++-- 2026-05-20 00:48:10,280 [ scc.git] DEBUG src/viewers/viewer/utils/Style.js | 19 +- 2026-05-20 00:48:10,281 [ scc.git] DEBUG 13 files changed, 727 insertions(+), 47 deletions(-) 2026-05-20 00:48:10,281 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/format/OmeJSON.js 2026-05-20 00:48:10,282 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/source/TiledRegions.js 2026-05-20 00:48:10,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:10,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-20 00:48:10,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:10,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-20 00:48:10,607 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-05-20 00:48:10,607 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-05-20 00:48:10,608 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:10,611 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-05-20 00:48:10,611 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-05-20 00:48:10,611 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-05-20 00:48:10,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:10,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-20 00:48:10,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:10,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-20 00:48:11,069 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-05-20 00:48:11,069 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:11,072 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-05-20 00:48:11,072 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-05-20 00:48:11,072 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-05-20 00:48:11,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:11,349 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d137ae19ea7fca7bb2e8514b24f48f90e9573f61' 2026-05-20 00:48:11,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:11,360 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) d137ae19ea7fca7bb2e8514b24f48f90e9573f61' 2026-05-20 00:48:11,469 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-20 00:48:11,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:11,473 [ scc.git] DEBUG css/app.css | 327 +++++++++++++++++++++++++++++++++++ 2026-05-20 00:48:11,473 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 71 ++++++-- 2026-05-20 00:48:11,474 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 81 +++++++++ 2026-05-20 00:48:11,474 [ scc.git] DEBUG src/viewers/viewer/grid-overlay.js | 344 +++++++++++++++++++++++++++++++++++++ 2026-05-20 00:48:11,474 [ scc.git] DEBUG 4 files changed, 807 insertions(+), 16 deletions(-) 2026-05-20 00:48:11,474 [ scc.git] DEBUG mode change 100644 => 100755 css/app.css 2026-05-20 00:48:11,474 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.html 2026-05-20 00:48:11,474 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.js 2026-05-20 00:48:11,474 [ scc.git] DEBUG create mode 100755 src/viewers/viewer/grid-overlay.js 2026-05-20 00:48:11,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:11,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9d16e2d727cd57c2e6097612fbddffeab29e4f62' 2026-05-20 00:48:11,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:11,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 528 (Bump fast-uri from 3.1.0 to 3.1.2) 9d16e2d727cd57c2e6097612fbddffeab29e4f62' 2026-05-20 00:48:11,859 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:11,869 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-20 00:48:11,869 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-20 00:48:12,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:12,224 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2088dfdaf01eeaef3f57e903713747f15ab59c0f' 2026-05-20 00:48:12,233 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:12,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 529 (Image id and roi id initial params) 2088dfdaf01eeaef3f57e903713747f15ab59c0f' 2026-05-20 00:48:12,257 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-05-20 00:48:12,257 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-05-20 00:48:12,258 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:12,263 [ scc.git] DEBUG docs/README.md | 2 +- 2026-05-20 00:48:12,263 [ scc.git] DEBUG plugin/omero_iviewer/README.rst | 7 +++ 2026-05-20 00:48:12,263 [ scc.git] DEBUG plugin/omero_iviewer/iviewer_settings.py | 7 +++ 2026-05-20 00:48:12,263 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 27 +++++++++++- 2026-05-20 00:48:12,263 [ scc.git] DEBUG src/app/context.js | 76 ++++++++++++++++++++------------ 2026-05-20 00:48:12,263 [ scc.git] DEBUG src/app/thumbnail-slider.js | 2 +- 2026-05-20 00:48:12,263 [ scc.git] DEBUG src/model/image_config.js | 9 ++-- 2026-05-20 00:48:12,263 [ scc.git] DEBUG src/model/image_info.js | 18 ++++---- 2026-05-20 00:48:12,263 [ scc.git] DEBUG 8 files changed, 105 insertions(+), 43 deletions(-) 2026-05-20 00:48:12,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:12,674 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e11ffcc548b10e03fbfeba93c1682750a3fc0d4b' 2026-05-20 00:48:12,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:12,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 530 (Bump webpack-dev-server from 4.13.2 to 5.2.4) e11ffcc548b10e03fbfeba93c1682750a3fc0d4b' 2026-05-20 00:48:12,776 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:48:12,777 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:12,788 [ scc.git] DEBUG package-lock.json | 3876 ++++++++++++++++++++++++++++++++++++----------------- 2026-05-20 00:48:12,788 [ scc.git] DEBUG package.json | 2 +- 2026-05-20 00:48:12,788 [ scc.git] DEBUG 2 files changed, 2683 insertions(+), 1195 deletions(-) 2026-05-20 00:48:13,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:13,118 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:48:13,156 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:13,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:13,158 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:48:13,193 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:48:13,201 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d71d950> has no local changes 2026-05-20 00:48:13,201 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..0b7eaf7 Previously merged: - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:48:13,207 [ scc.git] DEBUG [detached HEAD 7bb3b26] merge master -Dorg -Ssuccess-only 2026-05-20 00:48:13,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:48:13,208 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:48:13,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-05-20 00:48:14,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-05-20 00:48:14,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-05-20 00:48:14,717 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:48:15,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:15,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:16,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:48:16,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:17,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:17,446 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:48:17,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-05-20 00:48:18,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:19,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:19,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:19,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:19,989 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:48:20,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-05-20 00:48:21,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-05-20 00:48:21,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:22,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:22,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:23,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:23,052 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-05-20 00:48:23,053 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:48:23,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-20 00:48:23,053 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:23,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:23,055 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:48:23,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:48:23,058 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:48:23,060 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:48:23,063 [ scc.git] DEBUG Already up to date. 2026-05-20 00:48:23,063 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-20 00:48:23,433 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-20 00:48:23,433 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-20 00:48:23,437 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-05-20 00:48:23,778 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-20 00:48:23,778 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-05-20 00:48:23,782 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-05-20 00:48:24,118 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-20 00:48:24,118 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-05-20 00:48:24,122 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:24,122 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:24,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:24,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-20 00:48:24,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:24,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-20 00:48:24,193 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:24,196 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-05-20 00:48:24,196 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-05-20 00:48:24,196 [ scc.git] DEBUG requirements.txt | 2 +- 2026-05-20 00:48:24,196 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-05-20 00:48:24,196 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-05-20 00:48:24,196 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-05-20 00:48:24,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:24,415 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-20 00:48:24,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:24,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-20 00:48:24,427 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:24,430 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:48:24,430 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:48:24,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:24,846 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-20 00:48:24,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:24,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-20 00:48:24,934 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-05-20 00:48:24,934 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-05-20 00:48:24,934 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:48:24,934 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:48:24,936 [ scc.git] DEBUG Calling 'git reset --hard 9479525c0a8b4f8e49a174ae1abc0a817320bf0a' 2026-05-20 00:48:24,940 [ scc.git] DEBUG HEAD is now at 9479525 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-05-20 00:48:25,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:25,299 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-20 00:48:25,301 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-05-20 00:48:25,304 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-05-20 00:48:25,305 [ scc.config] DEBUG Found github.token 2026-05-20 00:48:25,305 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-05-20 00:48:25,306 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:48:25,342 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:25,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:25,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:48:25,380 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:48:25,383 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c52ef90> has no local changes 2026-05-20 00:48:25,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:48:25,389 [ scc.git] DEBUG [detached HEAD 6961abb] merge master -Dorg -Ssuccess-only 2026-05-20 00:48:25,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:48:25,390 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:48:25,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-05-20 00:48:26,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-05-20 00:48:26,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-05-20 00:48:27,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:28,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:28,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:29,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:29,106 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-20 00:48:29,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-05-20 00:48:30,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-05-20 00:48:30,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:31,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:31,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:32,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:32,184 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-20 00:48:32,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-05-20 00:48:33,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-05-20 00:48:33,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:34,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:34,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:35,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:35,293 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-20 00:48:35,293 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:48:35,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-20 00:48:35,294 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:35,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:35,296 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:48:35,298 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:48:35,298 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:48:35,301 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:48:35,308 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-05-20 00:48:36,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-05-20 00:48:36,009 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-05-20 00:48:36,522 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-20 00:48:36,522 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-05-20 00:48:36,527 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-05-20 00:48:37,020 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-20 00:48:37,021 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-05-20 00:48:37,025 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-05-20 00:48:37,334 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-20 00:48:37,334 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-05-20 00:48:37,338 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:37,338 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:37,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:37,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-20 00:48:37,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:37,346 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-20 00:48:37,359 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-05-20 00:48:37,359 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-05-20 00:48:37,359 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-20 00:48:37,359 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-20 00:48:37,359 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:48:37,360 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:48:37,362 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-20 00:48:37,366 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-20 00:48:37,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:37,563 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-20 00:48:37,566 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-20 00:48:37,569 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-05-20 00:48:37,571 [ scc.config] DEBUG Found github.token 2026-05-20 00:48:37,571 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-05-20 00:48:37,571 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-20 00:48:37,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:37,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-20 00:48:37,592 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-20 00:48:37,592 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-20 00:48:37,592 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-05-20 00:48:37,592 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:48:37,593 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:48:37,595 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-20 00:48:37,600 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-20 00:48:37,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:37,995 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-20 00:48:37,999 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-20 00:48:38,001 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-05-20 00:48:38,003 [ scc.config] DEBUG Found github.token 2026-05-20 00:48:38,003 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-05-20 00:48:38,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-20 00:48:38,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:38,008 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-20 00:48:38,015 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:38,019 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-05-20 00:48:38,019 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-05-20 00:48:38,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:38,423 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:48:38,460 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:38,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:38,462 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:48:38,498 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:48:38,502 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d6da250> has no local changes 2026-05-20 00:48:38,502 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:48:38,508 [ scc.git] DEBUG [detached HEAD 3e109eb] merge master -Dorg -Ssuccess-only 2026-05-20 00:48:38,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:48:38,508 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:48:39,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-05-20 00:48:39,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-05-20 00:48:40,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:40,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:41,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:41,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:41,802 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:48:42,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-05-20 00:48:42,293 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:48:42,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:43,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:44,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:44,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:44,526 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-20 00:48:45,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-05-20 00:48:45,010 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:48:45,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:46,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:46,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:47,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:47,148 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-20 00:48:47,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-05-20 00:48:48,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-05-20 00:48:48,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-05-20 00:48:49,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-05-20 00:48:49,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-05-20 00:48:50,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-05-20 00:48:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-05-20 00:48:50,787 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:48:50,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-20 00:48:50,787 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:50,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:50,789 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:48:50,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:48:50,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:48:50,794 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:48:50,797 [ scc.git] DEBUG Already up to date. 2026-05-20 00:48:50,797 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-05-20 00:48:51,156 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-20 00:48:51,156 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-05-20 00:48:51,160 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-05-20 00:48:51,495 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-20 00:48:51,495 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-05-20 00:48:51,499 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-05-20 00:48:51,828 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-20 00:48:51,828 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-05-20 00:48:51,831 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:51,831 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:51,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:51,834 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-20 00:48:51,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:51,839 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-20 00:48:51,845 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:51,848 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-05-20 00:48:51,848 [ scc.git] DEBUG package.json | 2 +- 2026-05-20 00:48:51,848 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-05-20 00:48:52,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:52,031 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-05-20 00:48:52,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:52,035 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-05-20 00:48:52,044 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-20 00:48:52,044 [ scc.git] DEBUG Auto-merging package.json 2026-05-20 00:48:52,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:52,048 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-05-20 00:48:52,048 [ scc.git] DEBUG package.json | 2 +- 2026-05-20 00:48:52,048 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-05-20 00:48:52,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:52,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-20 00:48:52,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:52,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-20 00:48:52,490 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:52,493 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:48:52,493 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:48:52,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:52,908 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:48:52,945 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:52,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:52,947 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:48:52,982 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:48:52,985 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c54e5d0> has no local changes 2026-05-20 00:48:52,985 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:48:52,991 [ scc.git] DEBUG [detached HEAD b93444a] merge master -Dorg -Ssuccess-only 2026-05-20 00:48:52,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:48:52,992 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:48:53,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-05-20 00:48:53,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-05-20 00:48:53,952 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:48:54,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:55,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:48:56,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:48:56,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-20 00:48:57,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:48:57,004 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:48:57,004 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:48:57,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-20 00:48:57,004 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:57,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:57,007 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:48:57,009 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:48:57,009 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:48:57,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:48:57,014 [ scc.git] DEBUG Already up to date. 2026-05-20 00:48:57,014 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-05-20 00:48:57,313 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-05-20 00:48:57,313 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-05-20 00:48:57,317 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:57,317 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:57,317 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:57,319 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-20 00:48:57,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:57,324 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-20 00:48:57,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:48:57,333 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:48:57,333 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:48:57,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:48:57,518 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:48:57,555 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:57,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:57,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:48:57,594 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:48:57,597 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c54c650> has no local changes 2026-05-20 00:48:57,597 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:48:57,602 [ scc.git] DEBUG [detached HEAD bc933c9] merge master -Dorg -Ssuccess-only 2026-05-20 00:48:57,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:48:57,603 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:48:58,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-05-20 00:48:58,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-05-20 00:48:58,541 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:48:58,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-20 00:48:58,541 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:58,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:58,544 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:48:58,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:48:58,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:48:58,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:48:58,557 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-05-20 00:48:59,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-05-20 00:48:59,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-05-20 00:48:59,970 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:48:59,970 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:48:59,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:48:59,973 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:00,011 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:00,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:00,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:00,048 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:00,051 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d73bc10> has no local changes 2026-05-20 00:49:00,051 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:00,057 [ scc.git] DEBUG [detached HEAD 044d7dc] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:00,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:00,058 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:00,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-05-20 00:49:01,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-05-20 00:49:01,067 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:49:01,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:02,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:02,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:03,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:03,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:03,896 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:49:04,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-05-20 00:49:04,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-05-20 00:49:05,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:06,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:06,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:07,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:07,051 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-20 00:49:07,051 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:07,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-20 00:49:07,051 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:07,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:07,054 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:07,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:07,057 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:07,059 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:07,062 [ scc.git] DEBUG Already up to date. 2026-05-20 00:49:07,062 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-20 00:49:07,505 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-20 00:49:07,505 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-20 00:49:07,510 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-20 00:49:07,857 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-20 00:49:07,858 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-20 00:49:07,862 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:07,862 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:07,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:07,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-20 00:49:07,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:07,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-20 00:49:07,969 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-05-20 00:49:07,969 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG Auto-merging setup.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-05-20 00:49:07,970 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:49:07,970 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:49:07,973 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-20 00:49:07,976 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-05-20 00:49:08,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:08,157 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-20 00:49:08,160 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-20 00:49:08,163 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2026-05-20 00:49:08,165 [ scc.config] DEBUG Found github.token 2026-05-20 00:49:08,165 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-05-20 00:49:08,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-20 00:49:08,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:08,169 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-20 00:49:08,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:08,179 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:49:08,179 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:49:08,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:08,595 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:08,633 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:08,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:08,635 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:08,670 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:08,673 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217f5e7d10> has no local changes 2026-05-20 00:49:08,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:08,679 [ scc.git] DEBUG [detached HEAD 026da25] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:08,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:08,680 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:09,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-05-20 00:49:09,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-05-20 00:49:10,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-05-20 00:49:10,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-05-20 00:49:11,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:11,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:12,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:12,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:12,797 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-20 00:49:12,797 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:12,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-20 00:49:12,797 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:12,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:12,800 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:12,802 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:12,802 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:12,805 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:12,812 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-05-20 00:49:13,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-05-20 00:49:14,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-05-20 00:49:14,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-05-20 00:49:14,894 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-20 00:49:15,463 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-05-20 00:49:15,463 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-20 00:49:15,468 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:15,468 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:15,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:15,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-05-20 00:49:15,473 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:15,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-05-20 00:49:15,483 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-05-20 00:49:15,484 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:15,487 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-05-20 00:49:15,487 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-05-20 00:49:15,487 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-05-20 00:49:15,487 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-05-20 00:49:15,487 [ scc.git] DEBUG ms/test | 2 ++ 2026-05-20 00:49:15,487 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-05-20 00:49:15,487 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-05-20 00:49:15,487 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-05-20 00:49:15,487 [ scc.git] DEBUG create mode 100755 ms/test 2026-05-20 00:49:15,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:15,677 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:15,716 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:15,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:15,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:15,754 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:15,757 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c576210> has no local changes 2026-05-20 00:49:15,758 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:15,763 [ scc.git] DEBUG [detached HEAD 844fafd] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:15,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:15,764 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:16,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-05-20 00:49:16,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-05-20 00:49:16,781 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:49:17,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:17,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:18,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:19,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:19,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:19,590 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:49:19,590 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:19,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-20 00:49:19,590 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:19,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:19,593 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:19,595 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:19,595 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:19,598 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:19,601 [ scc.git] DEBUG Already up to date. 2026-05-20 00:49:19,601 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-20 00:49:19,893 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-05-20 00:49:19,893 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-20 00:49:19,897 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:19,897 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:19,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:19,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-20 00:49:19,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:19,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-20 00:49:19,910 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:19,912 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:49:19,913 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:49:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:20,112 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:20,150 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:20,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:20,153 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:20,190 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:20,193 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c575c50> has no local changes 2026-05-20 00:49:20,193 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:20,198 [ scc.git] DEBUG [detached HEAD a8459b7] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:20,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:20,199 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:20,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-05-20 00:49:21,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-05-20 00:49:21,171 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:49:21,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:22,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:22,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:23,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:23,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:23,991 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:49:23,991 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:23,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-20 00:49:23,991 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:23,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:23,993 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:23,996 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:23,996 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:23,998 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:24,005 [ scc.git] DEBUG Updating deab817..160d894 2026-05-20 00:49:24,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-05-20 00:49:24,776 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-20 00:49:25,130 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-05-20 00:49:25,130 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-20 00:49:25,134 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:25,134 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:25,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:25,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-20 00:49:25,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:25,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-20 00:49:25,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:25,150 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:49:25,150 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:49:25,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:25,331 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:25,369 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:25,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:25,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:25,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:25,410 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c596350> has no local changes 2026-05-20 00:49:25,410 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:25,416 [ scc.git] DEBUG [detached HEAD e27909e] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:25,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:25,416 [ scc.git] INFO Overriding base-branch from master to main 2026-05-20 00:49:25,416 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:25,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-05-20 00:49:26,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-05-20 00:49:27,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-05-20 00:49:27,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:28,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:28,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:29,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:29,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:29,641 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-05-20 00:49:30,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-05-20 00:49:30,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-05-20 00:49:31,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-05-20 00:49:31,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:32,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:33,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:33,093 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-20 00:49:33,093 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:33,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-20 00:49:33,093 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:33,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:33,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-05-20 00:49:33,098 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:33,098 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-05-20 00:49:33,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-05-20 00:49:33,108 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-05-20 00:49:33,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-05-20 00:49:34,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-05-20 00:49:34,618 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-05-20 00:49:34,961 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-20 00:49:34,961 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-05-20 00:49:34,966 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-05-20 00:49:35,497 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-20 00:49:35,497 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-05-20 00:49:35,501 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:35,501 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:35,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:35,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-20 00:49:35,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:35,508 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-20 00:49:35,517 [ scc.git] DEBUG Auto-merging README.rst 2026-05-20 00:49:35,517 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-05-20 00:49:35,517 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-05-20 00:49:35,517 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-20 00:49:35,517 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-20 00:49:35,518 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-20 00:49:35,520 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-20 00:49:35,524 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-20 00:49:35,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:35,715 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-20 00:49:35,718 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-20 00:49:35,721 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#146](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-05-20 00:49:35,723 [ scc.config] DEBUG Found github.token 2026-05-20 00:49:35,723 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-05-20 00:49:35,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-20 00:49:35,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:35,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-20 00:49:35,736 [ scc.git] DEBUG Auto-merging README.rst 2026-05-20 00:49:35,736 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-20 00:49:35,737 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:35,740 [ scc.git] DEBUG README.rst | 3 + 2026-05-20 00:49:35,740 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-05-20 00:49:35,740 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-05-20 00:49:35,740 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-05-20 00:49:35,740 [ scc.git] DEBUG setup.py | 5 +- 2026-05-20 00:49:35,741 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-05-20 00:49:35,741 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-05-20 00:49:36,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:36,153 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:36,191 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:36,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:36,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:36,229 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:36,232 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c596750> has no local changes 2026-05-20 00:49:36,232 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:36,238 [ scc.git] DEBUG [detached HEAD ce1d0d6] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:36,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:36,238 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:36,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-05-20 00:49:37,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-05-20 00:49:37,193 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:49:37,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:38,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:38,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:39,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:39,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:39,940 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:49:39,940 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:39,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-20 00:49:39,940 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:39,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:39,943 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:39,946 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:39,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:39,948 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:39,951 [ scc.git] DEBUG Already up to date. 2026-05-20 00:49:39,951 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-05-20 00:49:40,301 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-05-20 00:49:40,301 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-05-20 00:49:40,306 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:40,306 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:40,306 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:40,308 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-20 00:49:40,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:40,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-20 00:49:40,319 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:40,321 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:49:40,321 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:49:40,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:40,509 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:40,547 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:40,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:40,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:40,585 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:40,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c5daf10> has no local changes 2026-05-20 00:49:40,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:40,594 [ scc.git] DEBUG [detached HEAD 7efde62] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:40,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:40,594 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:41,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-05-20 00:49:41,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-05-20 00:49:41,578 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-20 00:49:42,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:42,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-20 00:49:43,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-20 00:49:43,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-20 00:49:44,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-05-20 00:49:44,389 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:49:44,390 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:44,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-20 00:49:44,390 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:44,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:44,392 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:44,395 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:44,395 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:44,397 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:44,400 [ scc.git] DEBUG Already up to date. 2026-05-20 00:49:44,400 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-05-20 00:49:44,773 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-05-20 00:49:44,773 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-05-20 00:49:44,777 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:44,778 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:44,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:44,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-20 00:49:44,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:44,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-20 00:49:44,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-20 00:49:44,794 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-20 00:49:44,794 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-20 00:49:44,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:44,996 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:45,037 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:45,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:45,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:45,077 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:45,081 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c52f190> has no local changes 2026-05-20 00:49:45,081 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:45,086 [ scc.git] DEBUG [detached HEAD 1ad9dc4] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:45,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:45,087 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:45,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-05-20 00:49:45,466 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:45,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-20 00:49:45,466 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:45,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:45,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-20 00:49:45,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:45,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-20 00:49:45,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-20 00:49:45,476 [ scc.git] DEBUG Already up to date. 2026-05-20 00:49:45,476 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:45,476 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:45,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:45,479 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:45,515 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:45,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:45,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:45,554 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:45,557 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c5bfe10> has no local changes 2026-05-20 00:49:45,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:45,564 [ scc.git] DEBUG [detached HEAD 298a1a1] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:45,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:45,564 [ scc.git] INFO Overriding base-branch from master to develop 2026-05-20 00:49:45,564 [ scc.repo] DEBUG ## PRs found: 2026-05-20 00:49:45,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-05-20 00:49:45,928 [ scc.repo] DEBUG ## Branches found: 2026-05-20 00:49:45,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-20 00:49:45,929 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:45,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:45,931 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-05-20 00:49:45,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-20 00:49:45,934 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-05-20 00:49:45,936 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-05-20 00:49:45,948 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-05-20 00:49:46,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-05-20 00:49:47,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-05-20 00:49:47,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-05-20 00:49:48,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-05-20 00:49:49,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-05-20 00:49:50,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-05-20 00:49:50,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-05-20 00:49:50,633 [ scc.git] DEBUG ## Unique users: [] 2026-05-20 00:49:50,633 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:50,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:50,635 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-20 00:49:50,674 [ scc.git] DEBUG Get sha1 of %s 2026-05-20 00:49:50,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-20 00:49:50,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:50,713 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:49:50,717 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217c3bd4d0> has no local changes 2026-05-20 00:49:50,717 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:49:50,722 [ scc.git] DEBUG [detached HEAD 535b576] merge master -Dorg -Ssuccess-only 2026-05-20 00:49:50,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:49:50,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-20 00:49:50,795 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-05-20 00:49:51,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:51,074 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-05-20 00:49:51,076 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-05-20 00:49:51,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:51,529 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-05-20 00:49:51,531 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-05-20 00:49:51,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:51,963 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-05-20 00:49:51,966 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-05-20 00:49:52,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:52,401 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-05-20 00:49:52,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:52,833 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-05-20 00:49:52,835 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-05-20 00:49:53,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:53,268 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-05-20 00:49:53,270 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-05-20 00:49:53,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:53,717 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-05-20 00:49:53,719 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-05-20 00:49:54,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:54,156 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-05-20 00:49:54,158 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-05-20 00:49:54,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:54,593 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-05-20 00:49:54,596 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-05-20 00:49:55,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:55,029 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-05-20 00:49:55,031 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-05-20 00:49:55,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:55,470 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-05-20 00:49:55,472 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-05-20 00:49:55,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:55,968 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-05-20 00:49:55,970 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-05-20 00:49:56,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:56,429 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-05-20 00:49:56,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:56,860 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-05-20 00:49:57,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:57,300 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-05-20 00:49:57,302 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-05-20 00:49:57,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:57,740 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-05-20 00:49:58,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:58,193 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-05-20 00:49:58,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:58,638 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-05-20 00:49:58,640 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-05-20 00:49:59,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:59,072 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-05-20 00:49:59,074 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-05-20 00:49:59,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:59,513 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-05-20 00:49:59,515 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-05-20 00:49:59,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:49:59,971 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-05-20 00:49:59,973 [ scc.config] DEBUG Found submodule.scripts.url 2026-05-20 00:50:00,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-20 00:50:00,406 [ scc.config] DEBUG Found submodule.scripts.branch 2026-05-20 00:50:00,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-20 00:50:00,481 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f217d711790> has local changes 2026-05-20 00:50:00,481 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..6ffb01dc Previously merged: - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..0b7eaf7 Previously merged: - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#146 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/146/)' 2026-05-20 00:50:00,492 [ scc.git] DEBUG [detached HEAD 85dff13] merge master -Dorg -Ssuccess-only 2026-05-20 00:50:00,492 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-05-20 00:50:00,492 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-20 00:50:00,493 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-05-20 00:50:00,493 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-05-20 00:50:00,493 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-05-20 00:50:00,493 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-05-20 00:50:00,493 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-05-20 00:50:00,493 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-05-20 00:50:00,493 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-05-20 00:50:00,493 [ scc.merge] INFO 2026-05-20 00:50:00,493 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-05-20 00:50:00,493 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' (status: failure) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-20 00:50:00,493 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-05-20 00:50:00,494 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-05-20 00:50:00,494 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,494 [ scc.merge] INFO 2026-05-20 00:50:00,494 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-05-20 00:50:00,494 [ scc.merge] INFO 2026-05-20 00:50:00,494 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-20 00:50:00,494 [ scc.merge] INFO 2026-05-20 00:50:00,494 [ scc.merge] INFO Repository: ome/omero-figure 2026-05-20 00:50:00,494 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-05-20 00:50:00,494 [ scc.merge] INFO Updating 9cc36cde..6ffb01dc 2026-05-20 00:50:00,494 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-05-20 00:50:00,494 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,495 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,495 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-05-20 00:50:00,495 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,495 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,495 [ scc.merge] INFO Repository: ome/omero-gallery 2026-05-20 00:50:00,495 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,495 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-20 00:50:00,495 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-20 00:50:00,495 [ scc.merge] INFO 2026-05-20 00:50:00,496 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-20 00:50:00,496 [ scc.merge] INFO 2026-05-20 00:50:00,496 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-05-20 00:50:00,496 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-05-20 00:50:00,496 [ scc.merge] INFO Updating 7a798ce..0b7eaf7 2026-05-20 00:50:00,496 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,496 [ scc.merge] INFO 2026-05-20 00:50:00,496 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-05-20 00:50:00,496 [ scc.merge] INFO 2026-05-20 00:50:00,496 [ scc.merge] INFO Repository: ome/omero-mapr 2026-05-20 00:50:00,496 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,496 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-05-20 00:50:00,496 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,496 [ scc.merge] INFO 2026-05-20 00:50:00,496 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Repository: ome/omero-metadata 2026-05-20 00:50:00,497 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-05-20 00:50:00,497 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Repository: ome/omero-parade 2026-05-20 00:50:00,497 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-05-20 00:50:00,497 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-05-20 00:50:00,497 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Repository: ome/omero-rois 2026-05-20 00:50:00,497 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-20 00:50:00,497 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-05-20 00:50:00,497 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-05-20 00:50:00,497 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,497 [ scc.merge] INFO Repository: ome/omero-signup 2026-05-20 00:50:00,497 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,497 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-05-20 00:50:00,498 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-05-20 00:50:00,498 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-05-20 00:50:00,498 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Repository: ome/omero-upload 2026-05-20 00:50:00,498 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-05-20 00:50:00,498 [ scc.merge] INFO Updating deab817..160d894 2026-05-20 00:50:00,498 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-05-20 00:50:00,498 [ scc.merge] INFO Excluded PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-05-20 00:50:00,498 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-05-20 00:50:00,498 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-20 00:50:00,498 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,498 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-05-20 00:50:00,498 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,498 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-05-20 00:50:00,499 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO Merged PRs: 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-05-20 00:50:00,499 [ scc.merge] INFO Already up to date. 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO Repository: ome/scripts 2026-05-20 00:50:00,499 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-05-20 00:50:00,499 [ scc.merge] INFO Previously merged: 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-05-20 00:50:00,499 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] INFO 2026-05-20 00:50:00,499 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-20 00:50:00,499 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-20 00:50:00,501 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-20 00:50:00,503 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-20 00:50:00,505 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-20 00:50:00,507 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-20 00:50:00,509 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-20 00:50:00,512 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-20 00:50:00,516 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-20 00:50:00,519 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-20 00:50:00,521 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-20 00:50:00,523 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-20 00:50:00,525 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-20 00:50:00,527 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-20 00:50:00,529 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-20 00:50:00,531 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-20 00:50:00,533 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-20 00:50:00,535 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-20 00:50:00,537 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-20 00:50:00,539 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-20 00:50:00,541 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-20 00:50:00,543 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-20 00:50:00,545 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-20 00:50:00,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-20 00:50:00,548 [ scc.git] DEBUG Calling 'git remote' 2026-05-20 00:50:00,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 39be30a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD a6b08c4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-20 00:50:50,538 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-20 00:51:00,391 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-20 00:51:03,081 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-20 00:51:08,120 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-20 00:51:55,941 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS