![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 197 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 173 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.8-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.8-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.8 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-06 00:41:37,381 [ scc.config] DEBUG Found github.token 2024-09-06 00:41:37,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-06 00:41:37,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:41:37,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:41:38,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-06 00:41:38,363 [ scc.gh] DEBUG 4038 remaining from 5000 (Reset at 01:09 2024-09-06 00:41:38,364 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:38,368 [ scc.git] DEBUG Check current status 2024-09-06 00:41:38,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:38,372 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-06 00:41:38,373 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:38,438 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-06 00:41:38,442 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-06 00:41:38,445 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-06 00:41:38,448 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-06 00:41:38,452 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-06 00:41:38,455 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-06 00:41:38,458 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-06 00:41:38,477 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-06 00:41:38,480 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-06 00:41:38,483 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-06 00:41:38,486 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-06 00:41:38,489 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-06 00:41:38,493 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-06 00:41:38,496 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-06 00:41:38,515 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-06 00:41:38,518 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-06 00:41:38,520 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-06 00:41:38,523 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-06 00:41:38,526 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-06 00:41:38,529 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-06 00:41:38,533 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-06 00:41:38,537 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-06 00:41:38,542 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:38,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-06 00:41:39,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:41:39,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:41:40,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:41:40,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:41:40,519 [ scc.git] DEBUG Resetting... 2024-09-06 00:41:40,519 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-06 00:41:40,529 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-06 00:41:40,529 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-06 00:41:40,630 [ scc.git] DEBUG Check current status 2024-09-06 00:41:40,631 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:40,635 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-06 00:41:40,636 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:40,680 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-06 00:41:40,683 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-06 00:41:40,686 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-06 00:41:40,689 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-06 00:41:40,693 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-06 00:41:40,695 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-06 00:41:40,698 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-06 00:41:40,701 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-06 00:41:40,704 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-06 00:41:40,707 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-06 00:41:40,710 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-06 00:41:40,712 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-06 00:41:40,715 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-06 00:41:40,718 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-06 00:41:40,721 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-06 00:41:40,723 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-06 00:41:40,726 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-06 00:41:40,728 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-06 00:41:40,731 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-06 00:41:40,733 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-06 00:41:40,736 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-06 00:41:40,739 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-06 00:41:40,740 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-06 00:41:40,740 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-06 00:41:40,740 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-06 00:41:40,740 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-06 00:41:40,740 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-06 00:41:40,740 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:41:40,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-09-06 00:41:40,925 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:41:40,925 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:41:40,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:41:40,929 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:41:40,933 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:41:40,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:41:40,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:41:40,941 [ scc.git] DEBUG Already up to date. 2024-09-06 00:41:40,942 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:41:40,942 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:41:40,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:41:40,945 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:41:40,994 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:41:40,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:41:40,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:41:42,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4454eeae20> has no local changes 2024-09-06 00:41:42,058 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:41:42,130 [ scc.git] DEBUG [detached HEAD 03e5298] merge master -Dorg -Snone 2024-09-06 00:41:42,130 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-06 00:41:42,130 [ scc.merge] INFO Already up to date. 2024-09-06 00:41:42,130 [ scc.merge] INFO 2024-09-06 00:41:42,131 [ scc.merge] INFO 2024-09-06 00:41:42,131 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-06 00:41:42,131 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-06 00:41:49,799 [ scc.config] DEBUG Found github.token 2024-09-06 00:41:49,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-06 00:41:49,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:41:50,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:41:50,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-06 00:41:50,716 [ scc.gh] DEBUG 4030 remaining from 5000 (Reset at 01:09 2024-09-06 00:41:50,716 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:50,722 [ scc.git] DEBUG Check current status 2024-09-06 00:41:50,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:50,727 [ scc.git] DEBUG 03e5298 merge master -Dorg -Snone 2024-09-06 00:41:50,728 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:50,777 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-06 00:41:50,780 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-06 00:41:50,784 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-06 00:41:50,788 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-06 00:41:50,793 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-06 00:41:50,797 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-06 00:41:50,800 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-06 00:41:50,805 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-06 00:41:50,809 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-06 00:41:50,813 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-06 00:41:50,817 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-06 00:41:50,821 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-06 00:41:50,824 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-06 00:41:50,827 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-06 00:41:50,830 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-06 00:41:50,833 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-06 00:41:50,835 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-06 00:41:50,837 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-06 00:41:50,839 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-06 00:41:50,842 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-06 00:41:50,844 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-06 00:41:50,848 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-06 00:41:50,854 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:50,854 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-06 00:41:50,856 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-06 00:41:51,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-06 00:41:51,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:41:52,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:41:52,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:41:52,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:41:52,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:41:52,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-06 00:41:52,996 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:53,001 [ scc.git] DEBUG Check current status 2024-09-06 00:41:53,001 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:53,006 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-06 00:41:53,006 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:53,070 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:53,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-06 00:41:53,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:41:54,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:41:54,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:41:55,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:41:55,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:41:55,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:41:55,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-06 00:41:55,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:55,054 [ scc.git] DEBUG Check current status 2024-09-06 00:41:55,054 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:55,058 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-06 00:41:55,058 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:55,100 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:55,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-06 00:41:55,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:41:56,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:41:56,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:41:57,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:41:57,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:41:57,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:41:57,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-06 00:41:57,205 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:57,209 [ scc.git] DEBUG Check current status 2024-09-06 00:41:57,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:57,214 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-06 00:41:57,214 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:57,264 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:57,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-06 00:41:58,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:41:58,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:41:58,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:41:59,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:41:59,278 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:41:59,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:41:59,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-06 00:41:59,319 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:41:59,323 [ scc.git] DEBUG Check current status 2024-09-06 00:41:59,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:41:59,327 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-06 00:41:59,328 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:41:59,367 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:41:59,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-06 00:42:00,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:00,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:01,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:01,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:01,433 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:01,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:01,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-06 00:42:01,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:01,492 [ scc.git] DEBUG Check current status 2024-09-06 00:42:01,492 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:01,516 [ scc.git] DEBUG 5f623996 Bump version: 7.1.0 → 7.1.1.dev0 2024-09-06 00:42:01,517 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:01,587 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:01,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-06 00:42:02,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:02,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:03,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:03,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:03,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:03,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:03,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-06 00:42:03,571 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:03,576 [ scc.git] DEBUG Check current status 2024-09-06 00:42:03,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:03,581 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-06 00:42:03,581 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:03,624 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:04,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-06 00:42:04,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:04,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:05,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:05,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:05,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:05,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:05,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-06 00:42:05,701 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:05,708 [ scc.git] DEBUG Check current status 2024-09-06 00:42:05,708 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:05,716 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-06 00:42:05,716 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:05,769 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:06,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-06 00:42:06,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:06,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:07,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:07,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:07,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:07,868 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:07,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-06 00:42:07,870 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:07,874 [ scc.git] DEBUG Check current status 2024-09-06 00:42:07,874 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:07,878 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-06 00:42:07,878 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:07,919 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:08,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-06 00:42:08,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:09,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:09,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:09,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:09,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:09,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:09,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-06 00:42:09,951 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:09,956 [ scc.git] DEBUG Check current status 2024-09-06 00:42:09,957 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:09,962 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-06 00:42:09,962 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:10,007 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:10,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-06 00:42:10,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:11,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:11,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:12,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:12,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:12,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:12,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-06 00:42:12,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:12,121 [ scc.git] DEBUG Check current status 2024-09-06 00:42:12,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:12,126 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-06 00:42:12,126 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:12,173 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:12,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-06 00:42:12,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:13,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:13,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:14,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:14,181 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:14,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:14,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-06 00:42:14,221 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:14,227 [ scc.git] DEBUG Check current status 2024-09-06 00:42:14,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:14,232 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-06 00:42:14,233 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:14,287 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:14,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-06 00:42:15,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:15,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:15,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:16,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:16,306 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:16,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:16,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-06 00:42:16,366 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:16,372 [ scc.git] DEBUG Check current status 2024-09-06 00:42:16,372 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:16,377 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-06 00:42:16,378 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:16,424 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:16,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-06 00:42:17,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:17,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:18,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:18,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:18,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:18,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:18,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-06 00:42:18,490 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:18,497 [ scc.git] DEBUG Check current status 2024-09-06 00:42:18,497 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:18,503 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-06 00:42:18,503 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:18,560 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:18,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-06 00:42:19,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:19,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:20,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:20,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:20,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:20,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:20,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-06 00:42:20,632 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:20,638 [ scc.git] DEBUG Check current status 2024-09-06 00:42:20,638 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:20,644 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-06 00:42:20,645 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:20,709 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:21,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-06 00:42:21,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:21,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:22,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:22,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:22,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:22,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:22,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-06 00:42:22,847 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:22,853 [ scc.git] DEBUG Check current status 2024-09-06 00:42:22,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:22,860 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-06 00:42:22,860 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:22,914 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:23,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-06 00:42:23,219 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-06 00:42:23,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-06 00:42:23,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:24,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:24,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:25,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:25,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:25,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:25,174 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-06 00:42:25,174 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:25,181 [ scc.git] DEBUG Check current status 2024-09-06 00:42:25,181 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:25,186 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-06 00:42:25,186 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:25,235 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:25,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-06 00:42:26,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:26,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:26,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:27,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:27,254 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:27,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:27,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-06 00:42:27,296 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:27,303 [ scc.git] DEBUG Check current status 2024-09-06 00:42:27,303 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:27,309 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-06 00:42:27,310 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:27,358 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:27,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-06 00:42:28,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:28,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:28,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:29,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:29,373 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:29,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:29,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-06 00:42:29,437 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:29,444 [ scc.git] DEBUG Check current status 2024-09-06 00:42:29,444 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:29,451 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-06 00:42:29,452 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:29,498 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:29,499 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-06 00:42:29,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-06 00:42:30,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:30,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:31,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:31,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:31,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:31,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:31,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-06 00:42:31,574 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:31,580 [ scc.git] DEBUG Check current status 2024-09-06 00:42:31,581 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:31,588 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-06 00:42:31,588 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:31,638 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:31,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-06 00:42:31,974 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-06 00:42:32,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-06 00:42:32,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:33,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:33,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:33,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:33,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:33,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:33,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-06 00:42:33,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:33,947 [ scc.git] DEBUG Check current status 2024-09-06 00:42:33,947 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:33,954 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:33,957 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-06 00:42:34,026 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:34,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-06 00:42:34,275 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-06 00:42:34,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-06 00:42:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:35,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:35,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:36,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:36,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:36,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:36,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-06 00:42:36,193 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:36,200 [ scc.git] DEBUG Check current status 2024-09-06 00:42:36,200 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:36,205 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-06 00:42:36,206 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:36,255 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:36,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-06 00:42:37,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:37,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:37,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:38,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:38,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:38,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:38,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-06 00:42:38,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-06 00:42:38,368 [ scc.git] DEBUG Check current status 2024-09-06 00:42:38,368 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:38,389 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-06 00:42:38,390 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:38,440 [ scc.config] DEBUG Found remote.origin.url 2024-09-06 00:42:38,441 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-06 00:42:38,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-06 00:42:38,710 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-06 00:42:38,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-06 00:42:39,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-06 00:42:39,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-06 00:42:40,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-06 00:42:40,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-06 00:42:40,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:40,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:40,629 [ scc.git] DEBUG Resetting... 2024-09-06 00:42:40,629 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-06 00:42:40,660 [ scc.git] DEBUG HEAD is now at 03e5298 merge master -Dorg -Snone 2024-09-06 00:42:40,660 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-06 00:42:40,802 [ scc.git] DEBUG Check current status 2024-09-06 00:42:40,802 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-06 00:42:40,809 [ scc.git] DEBUG 03e5298 merge master -Dorg -Snone 2024-09-06 00:42:40,810 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-06 00:42:40,883 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-06 00:42:40,887 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-06 00:42:40,898 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-06 00:42:40,915 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-06 00:42:40,932 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-06 00:42:40,935 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-06 00:42:40,937 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-06 00:42:40,941 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-06 00:42:40,944 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-06 00:42:40,951 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-06 00:42:40,962 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-06 00:42:40,968 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-06 00:42:40,977 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-06 00:42:40,983 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-06 00:42:40,988 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-06 00:42:40,993 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-06 00:42:40,997 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-06 00:42:41,001 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-06 00:42:41,004 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-06 00:42:41,009 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-06 00:42:41,013 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-06 00:42:41,019 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-06 00:42:41,020 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-06 00:42:41,020 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-06 00:42:41,020 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-06 00:42:41,021 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-06 00:42:41,021 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-06 00:42:41,021 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-06 00:42:41,021 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:42:41,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-09-06 00:42:41,170 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:42:41,171 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:41,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:41,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:42:41,187 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:42:41,187 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:42:41,195 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:42:41,204 [ scc.git] DEBUG Already up to date. 2024-09-06 00:42:41,204 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:42:41,205 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:41,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:41,212 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:42:41,280 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:41,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:41,287 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:42:41,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-06 00:42:42,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-06 00:42:42,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-06 00:42:43,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:42:43,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:42:44,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-06 00:42:44,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:42:44,518 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-06 00:42:44,518 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:42:44,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-06 00:42:44,519 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:44,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:44,524 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:42:44,529 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:42:44,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:42:44,534 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:42:44,539 [ scc.git] DEBUG Already up to date. 2024-09-06 00:42:44,539 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-06 00:42:45,102 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-06 00:42:45,102 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-06 00:42:45,125 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:42:45,125 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:45,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:45,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-06 00:42:45,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:45,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-06 00:42:45,241 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:42:45,244 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-06 00:42:45,244 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-06 00:42:45,244 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-06 00:42:45,244 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-06 00:42:45,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:42:45,379 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:42:45,428 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:45,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:45,434 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:45,480 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:42:45,488 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec51932b0> has no local changes 2024-09-06 00:42:45,488 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:42:45,498 [ scc.git] DEBUG [detached HEAD 0d0229d] merge master -Dorg -Ssuccess-only 2024-09-06 00:42:45,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:45,499 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:42:45,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-06 00:42:46,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-06 00:42:46,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-06 00:42:47,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-06 00:42:47,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:42:48,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:42:48,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-06 00:42:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:42:49,159 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-06 00:42:49,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-06 00:42:50,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-06 00:42:50,047 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:42:50,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-06 00:42:50,047 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:50,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:50,055 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:42:50,062 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:42:50,062 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:42:50,069 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:42:50,077 [ scc.git] DEBUG Already up to date. 2024-09-06 00:42:50,078 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-06 00:42:50,441 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-06 00:42:50,442 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-06 00:42:50,447 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:42:50,447 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:50,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:50,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-06 00:42:50,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:50,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-06 00:42:50,498 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:42:50,501 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-06 00:42:50,501 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-06 00:42:50,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:42:50,659 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:42:50,702 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:50,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:50,709 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:50,750 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:42:50,757 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4126e80> has no local changes 2024-09-06 00:42:50,757 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:42:50,768 [ scc.git] DEBUG [detached HEAD 09b5393] merge master -Dorg -Ssuccess-only 2024-09-06 00:42:50,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:50,768 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:42:51,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-06 00:42:51,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-06 00:42:52,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-06 00:42:52,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-06 00:42:52,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-06 00:42:53,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-06 00:42:53,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:42:54,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-06 00:42:54,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:42:54,837 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-06 00:42:55,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-06 00:42:55,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-06 00:42:56,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-06 00:42:56,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-06 00:42:57,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-06 00:42:57,061 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:42:57,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-06 00:42:57,061 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:57,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:57,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:42:57,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:42:57,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:42:57,079 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:42:57,087 [ scc.git] DEBUG Already up to date. 2024-09-06 00:42:57,087 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-06 00:42:57,523 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-06 00:42:57,524 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-06 00:42:57,529 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:42:57,529 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:57,529 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:57,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-06 00:42:57,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:57,549 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-06 00:42:57,589 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-06 00:42:57,590 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:42:57,593 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-06 00:42:57,593 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-06 00:42:57,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:42:57,719 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:42:57,764 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:42:57,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:42:57,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:42:57,815 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:42:57,823 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec51b5c70> has no local changes 2024-09-06 00:42:57,823 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:42:57,834 [ scc.git] DEBUG [detached HEAD de22556] merge master -Dorg -Ssuccess-only 2024-09-06 00:42:57,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:42:57,835 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:42:58,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-06 00:42:58,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-06 00:42:59,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-06 00:42:59,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-06 00:43:00,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-06 00:43:00,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:01,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:01,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-06 00:43:01,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:02,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-06 00:43:02,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-06 00:43:02,875 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-06 00:43:03,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-06 00:43:03,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-06 00:43:04,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-06 00:43:04,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-06 00:43:05,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:05,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-06 00:43:06,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:06,160 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-06 00:43:06,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-06 00:43:07,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-06 00:43:07,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-06 00:43:08,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:08,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-06 00:43:08,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:08,973 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-06 00:43:08,973 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:43:08,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-06 00:43:08,974 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:08,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:08,984 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:43:08,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:43:08,991 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:43:08,997 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:43:09,004 [ scc.git] DEBUG Already up to date. 2024-09-06 00:43:09,004 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-06 00:43:09,348 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-06 00:43:09,348 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-06 00:43:09,369 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-06 00:43:09,792 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-06 00:43:09,792 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-06 00:43:09,797 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-06 00:43:10,157 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-06 00:43:10,157 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-06 00:43:10,162 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:43:10,162 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:10,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:10,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-06 00:43:10,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:10,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-06 00:43:10,241 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-06 00:43:10,241 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-06 00:43:10,241 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-06 00:43:10,241 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:43:10,242 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:43:10,248 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-06 00:43:10,255 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-06 00:43:10,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:10,388 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-06 00:43:10,397 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-06 00:43:10,404 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-06 00:43:10,410 [ scc.config] DEBUG Found github.token 2024-09-06 00:43:10,410 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-06 00:43:10,410 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-06 00:43:10,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:10,424 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-06 00:43:10,454 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-06 00:43:10,454 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-06 00:43:10,454 [ scc.git] DEBUG Auto-merging setup.py 2024-09-06 00:43:10,454 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-06 00:43:10,454 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-06 00:43:10,454 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-06 00:43:10,454 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-06 00:43:10,454 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:43:10,455 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:43:10,461 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-06 00:43:10,469 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-06 00:43:10,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:10,782 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-06 00:43:10,789 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-06 00:43:10,795 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-09-06 00:43:10,801 [ scc.config] DEBUG Found github.token 2024-09-06 00:43:10,801 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-06 00:43:10,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-06 00:43:10,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:10,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-06 00:43:10,824 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-06 00:43:10,824 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-06 00:43:10,824 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:10,827 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-06 00:43:10,827 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-06 00:43:10,827 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-06 00:43:10,827 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-06 00:43:10,827 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-06 00:43:10,828 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-06 00:43:11,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:11,178 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:43:11,222 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:11,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:11,228 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:43:11,269 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:43:11,277 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec40fd2e0> has no local changes 2024-09-06 00:43:11,277 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:43:11,286 [ scc.git] DEBUG [detached HEAD 0e3fe79] merge master -Dorg -Ssuccess-only 2024-09-06 00:43:11,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:43:11,287 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:43:11,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-06 00:43:12,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-06 00:43:12,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-06 00:43:12,767 [ scc.repo] DEBUG # ... Include label: include 2024-09-06 00:43:13,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/dfac0847f63cbc67445c85263c311e6b22e78c56 HTTP/1.1" 200 None 2024-09-06 00:43:13,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/dfac0847f63cbc67445c85263c311e6b22e78c56/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:14,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/dfac0847f63cbc67445c85263c311e6b22e78c56/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:14,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/dfac0847f63cbc67445c85263c311e6b22e78c56 HTTP/1.1" 200 None 2024-09-06 00:43:15,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/dfac0847f63cbc67445c85263c311e6b22e78c56?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:15,064 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-06 00:43:15,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-06 00:43:15,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-06 00:43:15,961 [ scc.repo] DEBUG # ... Include label: include 2024-09-06 00:43:16,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-06 00:43:16,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:17,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:17,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b47792851e0427c1d5fc7ba778783b8e09e21f47 HTTP/1.1" 200 None 2024-09-06 00:43:18,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b47792851e0427c1d5fc7ba778783b8e09e21f47?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:18,281 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-06 00:43:18,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-06 00:43:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-06 00:43:19,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-06 00:43:19,750 [ scc.repo] DEBUG # ... Include label: include 2024-09-06 00:43:20,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/46dbf915ab2295b6f74c772a4168d6b29d78dd37 HTTP/1.1" 200 None 2024-09-06 00:43:20,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/46dbf915ab2295b6f74c772a4168d6b29d78dd37/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:21,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/46dbf915ab2295b6f74c772a4168d6b29d78dd37/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:21,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/46dbf915ab2295b6f74c772a4168d6b29d78dd37 HTTP/1.1" 200 None 2024-09-06 00:43:22,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/46dbf915ab2295b6f74c772a4168d6b29d78dd37?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:22,149 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-06 00:43:22,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-06 00:43:23,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-06 00:43:23,096 [ scc.repo] DEBUG # ... Include label: include 2024-09-06 00:43:23,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2a557ad923d044ed2e15ad67262eccfc0cd11323 HTTP/1.1" 200 None 2024-09-06 00:43:24,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2a557ad923d044ed2e15ad67262eccfc0cd11323/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:24,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2a557ad923d044ed2e15ad67262eccfc0cd11323/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:25,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/2a557ad923d044ed2e15ad67262eccfc0cd11323 HTTP/1.1" 200 None 2024-09-06 00:43:25,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/2a557ad923d044ed2e15ad67262eccfc0cd11323?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:25,513 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-06 00:43:25,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-06 00:43:26,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-06 00:43:26,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-06 00:43:27,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:27,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:28,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-06 00:43:28,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:28,727 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-06 00:43:29,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-06 00:43:29,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-06 00:43:30,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-06 00:43:30,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:31,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:31,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-09-06 00:43:31,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:31,891 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-06 00:43:32,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-09-06 00:43:32,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549/comments HTTP/1.1" 200 None 2024-09-06 00:43:33,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5abf96096809cff7265b80d2eb5fde20c04a266 HTTP/1.1" 200 None 2024-09-06 00:43:33,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5abf96096809cff7265b80d2eb5fde20c04a266/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:34,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5abf96096809cff7265b80d2eb5fde20c04a266/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:34,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d5abf96096809cff7265b80d2eb5fde20c04a266 HTTP/1.1" 200 None 2024-09-06 00:43:35,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d5abf96096809cff7265b80d2eb5fde20c04a266?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:35,160 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-09-06 00:43:35,160 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:43:35,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-06 00:43:35,161 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:35,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:35,168 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:43:35,174 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:43:35,174 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:43:35,181 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:43:35,188 [ scc.git] DEBUG Already up to date. 2024-09-06 00:43:35,189 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-09-06 00:43:36,912 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:36,912 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-09-06 00:43:36,916 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-06 00:43:37,547 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:37,547 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-06 00:43:37,554 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-06 00:43:37,936 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:37,937 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-06 00:43:37,942 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-06 00:43:38,419 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:38,419 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-06 00:43:38,424 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-06 00:43:38,702 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:38,702 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-06 00:43:38,707 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-06 00:43:39,562 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:39,562 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-06 00:43:39,567 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-06 00:43:40,732 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-06 00:43:40,732 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-06 00:43:40,737 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:43:40,737 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:40,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:40,743 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d5abf96096809cff7265b80d2eb5fde20c04a266' 2024-09-06 00:43:40,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:40,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) d5abf96096809cff7265b80d2eb5fde20c04a266' 2024-09-06 00:43:40,836 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-06 00:43:40,836 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-09-06 00:43:40,836 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-06 00:43:40,836 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-09-06 00:43:40,836 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:40,843 [ scc.git] DEBUG src/css/figure.css | 9 ++++ 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/models/panel_model.js | 83 +++++++++++++++++++++++++++++++++ 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 ++++++++++++- 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-09-06 00:43:40,844 [ scc.git] DEBUG src/js/views/right_panel_view.js | 72 +++++++++++++++++++++++++++- 2024-09-06 00:43:40,846 [ scc.git] DEBUG src/js/views/util.js | 52 +++++++++++++++++++++ 2024-09-06 00:43:40,846 [ scc.git] DEBUG src/templates/rois_form.template.html | 88 ++++++++++++++++++++++++++++++++++- 2024-09-06 00:43:40,846 [ scc.git] DEBUG 10 files changed, 354 insertions(+), 6 deletions(-) 2024-09-06 00:43:40,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:40,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-06 00:43:40,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:40,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-09-06 00:43:41,292 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-06 00:43:41,292 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-06 00:43:41,292 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-06 00:43:41,292 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-06 00:43:41,292 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-06 00:43:41,293 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:41,299 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-06 00:43:41,299 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-06 00:43:41,299 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-09-06 00:43:41,299 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-06 00:43:41,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:41,455 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-06 00:43:41,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:41,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-06 00:43:41,495 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:41,498 [ scc.git] DEBUG setup.py | 2 +- 2024-09-06 00:43:41,498 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-06 00:43:41,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:41,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2a557ad923d044ed2e15ad67262eccfc0cd11323' 2024-09-06 00:43:41,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:41,861 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 2a557ad923d044ed2e15ad67262eccfc0cd11323' 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-06 00:43:42,044 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging src/js/shape_editor/rect.js 2024-09-06 00:43:42,044 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/shape_editor/rect.js 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-06 00:43:42,044 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-06 00:43:42,044 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:43:42,045 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:43:42,053 [ scc.git] DEBUG Calling 'git reset --hard 47b56b96ff3b5b98947f64f23ef13a81b353b0eb' 2024-09-06 00:43:42,064 [ scc.git] DEBUG HEAD is now at 47b56b96 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-06 00:43:42,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:42,226 [ scc.git] DEBUG Calling 'git merge-base 5f623996a1906632e0ff91ce399a733d139a59d7 2a557ad923d044ed2e15ad67262eccfc0cd11323' 2024-09-06 00:43:42,233 [ scc.git] DEBUG Calling 'git diff --name-only 5f623996a1906632e0ff91ce399a733d139a59d7..5f623996a1906632e0ff91ce399a733d139a59d7' 2024-09-06 00:43:42,240 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - PR #549 will-moore 'Inset feature' - src/js/shape_editor/rect.js - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-06 00:43:42,245 [ scc.config] DEBUG Found github.token 2024-09-06 00:43:42,246 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-06 00:43:43,042 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2099 2024-09-06 00:43:43,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46dbf915ab2295b6f74c772a4168d6b29d78dd37' 2024-09-06 00:43:43,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:43,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 46dbf915ab2295b6f74c772a4168d6b29d78dd37' 2024-09-06 00:43:43,157 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-06 00:43:43,157 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-06 00:43:43,157 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-06 00:43:43,157 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-09-06 00:43:43,157 [ scc.git] DEBUG Auto-merging src/templates/rois_form.template.html 2024-09-06 00:43:43,157 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/rois_form.template.html 2024-09-06 00:43:43,157 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:43:43,158 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:43:43,166 [ scc.git] DEBUG Calling 'git reset --hard 47b56b96ff3b5b98947f64f23ef13a81b353b0eb' 2024-09-06 00:43:43,175 [ scc.git] DEBUG HEAD is now at 47b56b96 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-06 00:43:43,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:43,433 [ scc.git] DEBUG Calling 'git merge-base 5f623996a1906632e0ff91ce399a733d139a59d7 46dbf915ab2295b6f74c772a4168d6b29d78dd37' 2024-09-06 00:43:43,441 [ scc.git] DEBUG Calling 'git diff --name-only 5f623996a1906632e0ff91ce399a733d139a59d7..5f623996a1906632e0ff91ce399a733d139a59d7' 2024-09-06 00:43:43,446 [ scc.git] INFO - PR 578 Rdornier 'Image outline' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - PR #549 will-moore 'Inset feature' - src/templates/rois_form.template.html --conflicts 2024-09-06 00:43:43,451 [ scc.config] DEBUG Found github.token 2024-09-06 00:43:43,451 [ scc.git] DEBUG Adding comment to issue #578. 2024-09-06 00:43:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 201 1994 2024-09-06 00:43:44,618 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-06 00:43:44,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:44,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) b47792851e0427c1d5fc7ba778783b8e09e21f47' 2024-09-06 00:43:44,765 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-06 00:43:44,766 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:44,771 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +++++++++ 2024-09-06 00:43:44,771 [ scc.git] DEBUG src/js/models/undo.js | 3 ++- 2024-09-06 00:43:44,771 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 42 +++++++++++++++++++++++++++++++++--- 2024-09-06 00:43:44,771 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 ++++ 2024-09-06 00:43:44,771 [ scc.git] DEBUG 4 files changed, 55 insertions(+), 4 deletions(-) 2024-09-06 00:43:44,772 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-06 00:43:44,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:45,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfac0847f63cbc67445c85263c311e6b22e78c56' 2024-09-06 00:43:45,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:45,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) dfac0847f63cbc67445c85263c311e6b22e78c56' 2024-09-06 00:43:45,123 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2024-09-06 00:43:45,123 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2024-09-06 00:43:45,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:45,128 [ scc.git] DEBUG .gitignore | 2 + 2024-09-06 00:43:45,128 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-06 00:43:45,128 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-06 00:43:45,128 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-06 00:43:45,128 [ scc.git] DEBUG 4 files changed, 126 insertions(+), 26 deletions(-) 2024-09-06 00:43:45,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:45,406 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:43:45,447 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:45,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:45,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:43:45,492 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:43:45,501 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4095a90> has no local changes 2024-09-06 00:43:45,501 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:43:45,514 [ scc.git] DEBUG [detached HEAD 5130bd9e] merge master -Dorg -Ssuccess-only 2024-09-06 00:43:45,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:43:45,514 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:43:45,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-06 00:43:46,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-06 00:43:46,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-06 00:43:47,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-06 00:43:47,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:48,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-06 00:43:48,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:48,611 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-06 00:43:48,611 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:43:48,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-06 00:43:48,611 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:48,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:48,617 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:43:48,621 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:43:48,622 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:43:48,627 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:43:48,633 [ scc.git] DEBUG Already up to date. 2024-09-06 00:43:48,634 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-06 00:43:48,978 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-06 00:43:48,978 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-06 00:43:48,982 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:43:48,983 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:48,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:48,989 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-06 00:43:48,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:48,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-06 00:43:49,021 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-06 00:43:49,022 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:49,024 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-06 00:43:49,025 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-06 00:43:49,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:49,160 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:43:49,202 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:49,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:49,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:43:49,246 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:43:49,252 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec40e1ee0> has no local changes 2024-09-06 00:43:49,253 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:43:49,261 [ scc.git] DEBUG [detached HEAD 15d5196] merge master -Dorg -Ssuccess-only 2024-09-06 00:43:49,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:43:49,261 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:43:49,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-06 00:43:50,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-06 00:43:50,099 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:43:50,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-06 00:43:51,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:51,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-06 00:43:52,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:52,534 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-06 00:43:52,534 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:43:52,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-06 00:43:52,534 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:52,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:52,541 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:43:52,546 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:43:52,546 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:43:52,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:43:52,556 [ scc.git] DEBUG Already up to date. 2024-09-06 00:43:52,556 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-06 00:43:52,859 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-06 00:43:52,859 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-06 00:43:52,863 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:43:52,864 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:52,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:52,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-06 00:43:52,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:52,879 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-06 00:43:52,890 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:43:52,894 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-06 00:43:52,894 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-06 00:43:53,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:43:53,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:43:53,069 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:43:53,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:43:53,075 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:43:53,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:43:53,122 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4095bb0> has no local changes 2024-09-06 00:43:53,123 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:43:53,132 [ scc.git] DEBUG [detached HEAD cc9fb30] merge master -Dorg -Ssuccess-only 2024-09-06 00:43:53,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:43:53,132 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:43:53,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-06 00:43:54,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-06 00:43:54,044 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:43:54,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-06 00:43:55,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:55,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:56,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-06 00:43:56,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:56,470 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-06 00:43:56,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-06 00:43:57,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-06 00:43:57,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-06 00:43:58,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:43:58,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:43:59,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-06 00:43:59,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:43:59,680 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-06 00:44:00,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-06 00:44:00,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-06 00:44:00,598 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:44:01,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-06 00:44:01,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:02,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:02,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-06 00:44:03,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:03,179 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-06 00:44:03,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-06 00:44:03,614 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:44:04,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-06 00:44:04,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:05,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:05,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-06 00:44:06,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:06,047 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-06 00:44:06,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-06 00:44:06,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-06 00:44:07,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-06 00:44:07,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:08,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:08,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-06 00:44:09,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:09,225 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-06 00:44:09,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-06 00:44:10,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-06 00:44:10,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-06 00:44:11,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:11,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:12,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-06 00:44:12,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:12,543 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-06 00:44:13,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-06 00:44:13,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-06 00:44:14,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-06 00:44:14,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:14,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-06 00:44:15,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:15,312 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-06 00:44:15,313 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:15,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-06 00:44:15,313 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:15,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:15,320 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:15,325 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:15,325 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:15,355 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:15,362 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:15,362 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-06 00:44:15,894 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:15,894 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-06 00:44:15,898 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-06 00:44:16,724 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:16,724 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-06 00:44:16,729 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-06 00:44:17,162 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:17,162 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-06 00:44:17,167 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-06 00:44:17,451 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:17,451 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-06 00:44:17,456 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-06 00:44:17,741 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:17,741 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-06 00:44:17,746 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-06 00:44:18,092 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:18,093 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-06 00:44:18,097 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-06 00:44:18,383 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-06 00:44:18,384 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-06 00:44:18,388 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:18,388 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:18,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:18,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-06 00:44:18,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:18,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-06 00:44:18,466 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-06 00:44:18,467 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:18,470 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-06 00:44:18,470 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-06 00:44:18,470 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-06 00:44:18,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:18,604 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-06 00:44:18,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:18,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-06 00:44:18,768 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-06 00:44:18,769 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-06 00:44:18,769 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-06 00:44:18,769 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-06 00:44:18,769 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:18,773 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-06 00:44:18,774 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-06 00:44:18,774 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-06 00:44:18,774 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-06 00:44:18,774 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-06 00:44:18,774 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-06 00:44:18,774 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-06 00:44:18,774 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-06 00:44:18,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:18,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-06 00:44:18,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:19,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-06 00:44:19,062 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-06 00:44:19,063 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:19,066 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-06 00:44:19,066 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-06 00:44:19,066 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-06 00:44:19,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:19,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-06 00:44:19,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:19,396 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-06 00:44:19,431 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:19,440 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-06 00:44:19,440 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-06 00:44:19,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:19,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-06 00:44:19,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:19,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-06 00:44:19,838 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-06 00:44:19,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:20,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:20,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-06 00:44:20,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:20,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-06 00:44:20,309 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-06 00:44:20,310 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-06 00:44:20,310 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-06 00:44:20,310 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-06 00:44:20,315 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-06 00:44:20,315 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-06 00:44:20,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:20,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-06 00:44:20,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:20,603 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-06 00:44:20,721 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-06 00:44:20,721 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:20,731 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-06 00:44:20,731 [ scc.git] DEBUG package.json | 2 +- 2024-09-06 00:44:20,732 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-06 00:44:20,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:21,000 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:21,043 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:21,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:21,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:21,087 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:21,098 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec40b7bb0> has no local changes 2024-09-06 00:44:21,098 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:21,107 [ scc.git] DEBUG [detached HEAD f52f73d] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:21,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:21,108 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:21,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-06 00:44:22,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-06 00:44:22,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-06 00:44:23,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-06 00:44:23,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:24,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:24,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-06 00:44:24,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:24,941 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-06 00:44:24,941 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:24,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-06 00:44:24,942 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:24,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:24,948 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:24,952 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:24,953 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:24,959 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:24,965 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:24,966 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-06 00:44:25,278 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-06 00:44:25,278 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-06 00:44:25,282 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:25,283 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:25,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:25,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-06 00:44:25,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:25,299 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-06 00:44:25,308 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:25,311 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-06 00:44:25,311 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-06 00:44:25,311 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-06 00:44:25,311 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-06 00:44:25,311 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-06 00:44:25,312 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-06 00:44:25,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:25,445 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:25,486 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:25,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:25,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:25,534 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:25,541 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec405f7f0> has no local changes 2024-09-06 00:44:25,542 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:25,552 [ scc.git] DEBUG [detached HEAD 8a2d73d] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:25,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:25,553 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:26,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-06 00:44:26,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-06 00:44:26,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-06 00:44:27,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-06 00:44:27,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:28,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-06 00:44:28,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:28,651 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-06 00:44:29,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-06 00:44:29,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-06 00:44:30,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-06 00:44:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:30,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-06 00:44:31,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:31,343 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-06 00:44:31,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-06 00:44:32,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-06 00:44:32,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-06 00:44:33,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:33,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-06 00:44:33,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:33,998 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-06 00:44:33,998 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:33,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-06 00:44:33,999 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:33,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:34,011 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:34,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:34,024 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:34,038 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:34,053 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:34,053 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-06 00:44:34,504 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-06 00:44:34,504 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-06 00:44:34,509 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-06 00:44:34,947 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-06 00:44:34,947 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-06 00:44:34,951 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-06 00:44:35,231 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-06 00:44:35,231 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-06 00:44:35,235 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:35,235 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:35,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:35,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-06 00:44:35,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:35,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-06 00:44:35,322 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-06 00:44:35,322 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-06 00:44:35,322 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-06 00:44:35,322 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-06 00:44:35,323 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:44:35,323 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:44:35,330 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-06 00:44:35,337 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-06 00:44:35,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:35,481 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-06 00:44:35,489 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-06 00:44:35,494 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-06 00:44:35,498 [ scc.config] DEBUG Found github.token 2024-09-06 00:44:35,499 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-06 00:44:35,499 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-06 00:44:35,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:35,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-06 00:44:35,531 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-06 00:44:35,531 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-06 00:44:35,531 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-06 00:44:35,531 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:44:35,532 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:44:35,538 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-06 00:44:35,546 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-06 00:44:35,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:35,871 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-06 00:44:35,878 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-06 00:44:35,884 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-06 00:44:35,889 [ scc.config] DEBUG Found github.token 2024-09-06 00:44:35,889 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-06 00:44:35,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-06 00:44:35,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:35,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-06 00:44:35,939 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:35,942 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-06 00:44:35,942 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-06 00:44:36,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:36,255 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:36,298 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:36,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:36,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:36,344 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:36,352 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec405f5b0> has no local changes 2024-09-06 00:44:36,353 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:36,361 [ scc.git] DEBUG [detached HEAD a333850] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:36,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:36,362 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:36,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-06 00:44:37,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-06 00:44:37,224 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:44:37,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-06 00:44:38,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:38,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:39,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-06 00:44:39,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:39,585 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-06 00:44:40,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-06 00:44:40,044 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:44:40,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-06 00:44:41,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:41,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:42,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-06 00:44:42,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:42,457 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-06 00:44:42,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-06 00:44:42,900 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-06 00:44:43,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-06 00:44:43,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:44,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-06 00:44:44,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-06 00:44:45,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:45,325 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-06 00:44:45,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-06 00:44:46,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-06 00:44:46,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-06 00:44:47,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-06 00:44:47,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-06 00:44:48,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-06 00:44:48,139 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:48,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-06 00:44:48,139 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:48,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:48,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:48,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:48,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:48,160 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:48,166 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:48,167 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-06 00:44:48,517 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-06 00:44:48,517 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-06 00:44:48,522 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-06 00:44:48,830 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-06 00:44:48,830 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-06 00:44:48,835 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-06 00:44:49,115 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-06 00:44:49,115 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-06 00:44:49,120 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:49,120 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:49,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:49,126 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-06 00:44:49,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:49,137 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-06 00:44:49,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:49,151 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-06 00:44:49,151 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-06 00:44:49,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:49,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-06 00:44:49,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:49,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-06 00:44:49,333 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-06 00:44:49,333 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:49,337 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-06 00:44:49,337 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-06 00:44:49,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:49,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-06 00:44:49,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:49,700 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-06 00:44:49,734 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-06 00:44:49,735 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:49,739 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-06 00:44:49,740 [ scc.git] DEBUG package.json | 2 +- 2024-09-06 00:44:49,740 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-06 00:44:50,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:50,068 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:50,110 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:50,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:50,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:50,161 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:50,168 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec40c3ca0> has no local changes 2024-09-06 00:44:50,168 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:50,177 [ scc.git] DEBUG [detached HEAD 7eaeca9] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:50,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:50,178 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:50,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-06 00:44:50,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-06 00:44:51,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-06 00:44:51,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:52,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-06 00:44:52,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:52,786 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-06 00:44:52,786 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:52,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-06 00:44:52,786 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:52,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:52,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:52,798 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:52,798 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:52,804 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:52,809 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:52,810 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-06 00:44:53,112 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-06 00:44:53,112 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-06 00:44:53,118 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:53,118 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:53,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:53,124 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-06 00:44:53,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:53,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-06 00:44:53,145 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:53,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:53,282 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:53,324 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:53,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:53,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:53,373 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:53,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec40b0df0> has no local changes 2024-09-06 00:44:53,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:53,389 [ scc.git] DEBUG [detached HEAD 217cc74] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:53,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:53,390 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:53,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-06 00:44:54,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-06 00:44:54,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-06 00:44:55,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-06 00:44:55,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-06 00:44:56,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:44:56,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-06 00:44:56,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:44:56,910 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-06 00:44:56,910 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:44:56,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-06 00:44:56,910 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:56,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:56,919 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:44:56,926 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:44:56,926 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:44:56,934 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:44:56,941 [ scc.git] DEBUG Already up to date. 2024-09-06 00:44:56,942 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-06 00:44:57,424 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-06 00:44:57,424 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-06 00:44:57,429 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:44:57,429 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:57,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:57,435 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-06 00:44:57,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:57,446 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-06 00:44:57,455 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-06 00:44:57,455 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:44:57,458 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-06 00:44:57,458 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-06 00:44:57,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:44:57,592 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:44:57,635 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:44:57,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:44:57,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:44:57,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:44:57,691 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4072c10> has no local changes 2024-09-06 00:44:57,691 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:44:57,699 [ scc.git] DEBUG [detached HEAD bf98d49] merge master -Dorg -Ssuccess-only 2024-09-06 00:44:57,700 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:44:57,700 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:44:58,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-06 00:44:58,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-06 00:44:58,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-06 00:44:59,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-06 00:44:59,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:45:00,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-06 00:45:00,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:45:00,816 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-06 00:45:00,817 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:00,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-06 00:45:00,817 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:00,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:00,824 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:00,828 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:00,828 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:00,833 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:00,839 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:00,839 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-06 00:45:01,177 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-06 00:45:01,177 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-06 00:45:01,183 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:01,183 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:01,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:01,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-06 00:45:01,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:01,201 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-06 00:45:01,245 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG Auto-merging setup.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-06 00:45:01,245 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:45:01,245 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:45:01,251 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-06 00:45:01,258 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-06 00:45:01,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:01,402 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-06 00:45:01,409 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-06 00:45:01,415 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py --conflicts 2024-09-06 00:45:01,420 [ scc.config] DEBUG Found github.token 2024-09-06 00:45:01,420 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-06 00:45:01,420 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:01,458 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:01,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:01,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:01,502 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:01,509 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4069c40> has no local changes 2024-09-06 00:45:01,509 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:01,517 [ scc.git] DEBUG [detached HEAD 19c5aab] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:01,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:01,517 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:01,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-06 00:45:02,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-06 00:45:02,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-06 00:45:03,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-06 00:45:03,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:45:04,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-06 00:45:04,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:45:04,623 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-06 00:45:04,623 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:04,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-06 00:45:04,623 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:04,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:04,630 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:04,635 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:04,635 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:04,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:04,647 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:04,648 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-06 00:45:04,999 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-06 00:45:04,999 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-06 00:45:05,004 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:05,004 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:05,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-06 00:45:05,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-06 00:45:05,049 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-06 00:45:05,052 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-06 00:45:05,054 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-06 00:45:05,054 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-06 00:45:05,054 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-06 00:45:05,054 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-06 00:45:05,054 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-06 00:45:05,055 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-06 00:45:05,055 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-06 00:45:05,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:05,196 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:05,242 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:05,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:05,290 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:05,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc7b99d0> has no local changes 2024-09-06 00:45:05,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:05,308 [ scc.git] DEBUG [detached HEAD 179d822] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:05,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:05,309 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:05,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-06 00:45:05,613 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:05,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-06 00:45:05,613 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:05,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,620 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:05,626 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:05,626 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:05,633 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:05,640 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:05,640 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:05,640 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:05,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,645 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:05,686 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:05,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:05,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:05,732 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:05,739 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4011f40> has no local changes 2024-09-06 00:45:05,739 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:05,748 [ scc.git] DEBUG [detached HEAD 87f489b] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:05,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:05,748 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:06,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-06 00:45:06,042 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:06,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-06 00:45:06,042 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:06,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:06,048 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:06,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:06,053 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:06,058 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:06,069 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:06,069 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:06,070 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:06,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:06,077 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:06,121 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:06,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:06,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:06,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:06,178 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec4028460> has no local changes 2024-09-06 00:45:06,179 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:06,188 [ scc.git] DEBUG [detached HEAD 3a0f3f4] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:06,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:06,189 [ scc.git] INFO Overriding base-branch from master to main 2024-09-06 00:45:06,189 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:06,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-06 00:45:06,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-06 00:45:07,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-06 00:45:07,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-06 00:45:08,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-06 00:45:08,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:45:09,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-06 00:45:09,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:45:09,750 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-06 00:45:09,750 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:09,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-06 00:45:09,750 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:09,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:09,756 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-06 00:45:09,761 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:09,761 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-06 00:45:09,766 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-06 00:45:09,771 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:09,771 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-06 00:45:10,138 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-06 00:45:10,138 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-06 00:45:10,143 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:10,143 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:10,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-06 00:45:10,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-06 00:45:10,178 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-06 00:45:10,179 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-06 00:45:10,179 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:45:10,179 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:45:10,186 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-06 00:45:10,192 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-06 00:45:10,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:10,340 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-06 00:45:10,346 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-06 00:45:10,352 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-06 00:45:10,358 [ scc.config] DEBUG Found github.token 2024-09-06 00:45:10,359 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-06 00:45:10,359 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:10,400 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:10,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:10,448 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:10,455 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc7ecbb0> has no local changes 2024-09-06 00:45:10,455 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:10,466 [ scc.git] DEBUG [detached HEAD a634454] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:10,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:10,466 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:10,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-06 00:45:10,746 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:10,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-06 00:45:10,746 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:10,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:10,758 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:10,758 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:10,763 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:10,769 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:10,769 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:10,769 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:10,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,775 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:10,814 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:10,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:10,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:10,857 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:10,864 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc7bbeb0> has no local changes 2024-09-06 00:45:10,864 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:10,871 [ scc.git] DEBUG [detached HEAD 97f2c58] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:10,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:10,872 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:11,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-06 00:45:11,168 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:11,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-06 00:45:11,168 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:11,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:11,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:11,179 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:11,179 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:11,184 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:11,190 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:11,190 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:11,190 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:11,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:11,195 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:11,234 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:11,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:11,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:11,282 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:11,290 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc793640> has no local changes 2024-09-06 00:45:11,290 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:11,299 [ scc.git] DEBUG [detached HEAD f97cf60] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:11,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:11,300 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:11,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-06 00:45:12,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-06 00:45:12,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-06 00:45:13,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-06 00:45:13,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:45:13,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-06 00:45:14,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:45:14,339 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-06 00:45:14,339 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:14,339 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-06 00:45:14,339 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:14,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:14,346 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-06 00:45:14,351 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:14,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-06 00:45:14,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-06 00:45:14,363 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:14,363 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-06 00:45:14,710 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-06 00:45:14,710 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-06 00:45:14,715 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:14,715 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:14,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:14,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-06 00:45:14,726 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:14,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-06 00:45:14,767 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-06 00:45:14,767 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-06 00:45:14,767 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:45:14,768 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:45:14,775 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-06 00:45:14,783 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-06 00:45:15,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:15,191 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-06 00:45:15,199 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-06 00:45:15,205 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-06 00:45:15,211 [ scc.config] DEBUG Found github.token 2024-09-06 00:45:15,212 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-06 00:45:15,212 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:15,254 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:15,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:15,260 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:15,304 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:15,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc7f2c40> has no local changes 2024-09-06 00:45:15,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:15,326 [ scc.git] DEBUG [detached HEAD b5a3a81] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:15,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:15,327 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-06 00:45:15,327 [ scc.repo] DEBUG ## PRs found: 2024-09-06 00:45:15,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-06 00:45:16,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-06 00:45:16,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-06 00:45:17,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-06 00:45:17,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-06 00:45:18,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-06 00:45:18,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-06 00:45:19,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-06 00:45:19,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-06 00:45:19,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-06 00:45:20,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-06 00:45:20,400 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-06 00:45:20,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-06 00:45:21,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-06 00:45:21,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-06 00:45:22,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-06 00:45:22,301 [ scc.repo] DEBUG ## Branches found: 2024-09-06 00:45:22,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-06 00:45:22,301 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:22,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:22,312 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-06 00:45:22,321 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-06 00:45:22,321 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-06 00:45:22,329 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-06 00:45:22,338 [ scc.git] DEBUG Already up to date. 2024-09-06 00:45:22,338 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-06 00:45:22,805 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-06 00:45:22,805 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-06 00:45:22,813 [ scc.git] DEBUG ## Unique users: [] 2024-09-06 00:45:22,814 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:22,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:22,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-06 00:45:22,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:22,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-06 00:45:22,957 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-06 00:45:22,957 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-06 00:45:22,958 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-06 00:45:22,959 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-06 00:45:22,969 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-06 00:45:22,981 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-06 00:45:23,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:23,141 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-06 00:45:23,153 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-06 00:45:23,163 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#176](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-06 00:45:23,171 [ scc.config] DEBUG Found github.token 2024-09-06 00:45:23,171 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-06 00:45:23,171 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-06 00:45:23,236 [ scc.git] DEBUG Get sha1 of %s 2024-09-06 00:45:23,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-06 00:45:23,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:23,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:23,316 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ebc74a910> has no local changes 2024-09-06 00:45:23,317 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:23,326 [ scc.git] DEBUG [detached HEAD cd793dc] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:23,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:23,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-06 00:45:23,474 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-06 00:45:23,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:23,634 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-06 00:45:23,642 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-06 00:45:24,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:24,018 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-06 00:45:24,027 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-06 00:45:24,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:24,457 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-06 00:45:24,468 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-06 00:45:24,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:24,848 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-06 00:45:25,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:25,228 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-06 00:45:25,236 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-06 00:45:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:25,646 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-06 00:45:25,652 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-06 00:45:26,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:26,041 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-06 00:45:26,050 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-06 00:45:26,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:26,430 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-06 00:45:26,437 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-06 00:45:26,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:26,815 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-06 00:45:26,823 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-06 00:45:27,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:27,194 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-06 00:45:27,201 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-06 00:45:27,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:27,581 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-06 00:45:27,586 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-06 00:45:27,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:27,992 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-06 00:45:28,002 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-06 00:45:28,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:28,408 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-06 00:45:28,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:28,799 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-06 00:45:29,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:29,168 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-06 00:45:29,174 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-06 00:45:29,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:29,567 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-06 00:45:29,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:29,958 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-06 00:45:30,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:30,344 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-06 00:45:30,354 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-06 00:45:30,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:30,731 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-06 00:45:30,740 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-06 00:45:31,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:31,121 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-06 00:45:31,129 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-06 00:45:31,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:31,502 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-06 00:45:31,513 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-06 00:45:31,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-06 00:45:31,923 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-06 00:45:31,924 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-06 00:45:32,008 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ec5f00e20> has local changes 2024-09-06 00:45:32,008 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#176 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/176/)' 2024-09-06 00:45:32,024 [ scc.git] DEBUG [detached HEAD fdc44b2] merge master -Dorg -Ssuccess-only 2024-09-06 00:45:32,024 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-06 00:45:32,025 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-06 00:45:32,025 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-06 00:45:32,025 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-06 00:45:32,025 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-06 00:45:32,025 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-06 00:45:32,025 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-06 00:45:32,025 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,025 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-06 00:45:32,025 [ scc.merge] INFO 2024-09-06 00:45:32,025 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-06 00:45:32,025 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-06 00:45:32,026 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-06 00:45:32,026 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-06 00:45:32,026 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-06 00:45:32,026 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-06 00:45:32,026 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,026 [ scc.merge] INFO 2024-09-06 00:45:32,026 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,026 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-06 00:45:32,027 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-06 00:45:32,027 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-06 00:45:32,027 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-06 00:45:32,027 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-06 00:45:32,027 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-06 00:45:32,027 [ scc.merge] INFO 2024-09-06 00:45:32,027 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-06 00:45:32,027 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-06 00:45:32,027 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-06 00:45:32,028 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Merged PRs: 2024-09-06 00:45:32,028 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-06 00:45:32,028 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,028 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-06 00:45:32,029 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-06 00:45:32,029 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-06 00:45:32,029 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-06 00:45:32,029 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-06 00:45:32,029 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Repository: ome/scripts 2024-09-06 00:45:32,029 [ scc.merge] INFO Excluded PRs: 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-06 00:45:32,029 [ scc.merge] INFO Already up to date. 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-06 00:45:32,029 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-06 00:45:32,029 [ scc.merge] INFO 2024-09-06 00:45:32,029 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-06 00:45:32,030 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-06 00:45:32,036 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-06 00:45:32,042 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-06 00:45:32,049 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-06 00:45:32,054 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-06 00:45:32,059 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-06 00:45:32,065 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-06 00:45:32,071 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-06 00:45:32,077 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-06 00:45:32,081 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-06 00:45:32,086 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-06 00:45:32,091 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-06 00:45:32,098 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-06 00:45:32,103 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-06 00:45:32,109 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-06 00:45:32,116 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-06 00:45:32,122 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-06 00:45:32,127 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-06 00:45:32,133 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-06 00:45:32,139 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-06 00:45:32,145 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-06 00:45:32,151 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-06 00:45:32,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-06 00:45:32,157 [ scc.git] DEBUG Calling 'git remote' 2024-09-06 00:45:32,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD d6c183f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 5f623996 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 986d385] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-06 00:46:20,262 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-06 00:46:29,003 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-06 00:46:31,378 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-06 00:46:35,780 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-06 00:47:15,577 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS