![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 214 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 186 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-18 00:43:14,105 [ scc.config] DEBUG Found github.token 2024-09-18 00:43:14,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-18 00:43:14,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:43:14,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:43:15,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-18 00:43:15,066 [ scc.gh] DEBUG 4454 remaining from 5000 (Reset at 01:09 2024-09-18 00:43:15,067 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:15,071 [ scc.git] DEBUG Check current status 2024-09-18 00:43:15,071 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:15,076 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-18 00:43:15,076 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:15,123 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-18 00:43:15,126 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-18 00:43:15,129 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-18 00:43:15,146 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-18 00:43:15,150 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-18 00:43:15,153 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-18 00:43:15,156 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-18 00:43:15,170 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-18 00:43:15,173 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-18 00:43:15,176 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-18 00:43:15,178 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-18 00:43:15,181 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-18 00:43:15,184 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-18 00:43:15,187 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-18 00:43:15,214 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-18 00:43:15,217 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-18 00:43:15,219 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-18 00:43:15,222 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-18 00:43:15,225 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-18 00:43:15,228 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-18 00:43:15,231 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-18 00:43:15,235 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-18 00:43:15,240 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:15,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-18 00:43:16,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:16,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:16,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:17,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:17,228 [ scc.git] DEBUG Resetting... 2024-09-18 00:43:17,228 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-18 00:43:17,238 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-18 00:43:17,239 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-18 00:43:17,346 [ scc.git] DEBUG Check current status 2024-09-18 00:43:17,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:17,351 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-18 00:43:17,352 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:17,405 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-18 00:43:17,407 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-18 00:43:17,410 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-18 00:43:17,413 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-18 00:43:17,418 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-18 00:43:17,421 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-18 00:43:17,424 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-18 00:43:17,428 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-18 00:43:17,431 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-18 00:43:17,434 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-18 00:43:17,437 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-18 00:43:17,439 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-18 00:43:17,442 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-18 00:43:17,445 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-18 00:43:17,449 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-18 00:43:17,452 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-18 00:43:17,455 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-18 00:43:17,458 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-18 00:43:17,461 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-18 00:43:17,464 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-18 00:43:17,467 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-18 00:43:17,471 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-18 00:43:17,472 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-18 00:43:17,472 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-18 00:43:17,472 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-18 00:43:17,472 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-18 00:43:17,472 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-18 00:43:17,473 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:43:17,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-18 00:43:18,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-18 00:43:18,162 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:43:18,162 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-18 00:43:18,163 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:43:18,163 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:43:18,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:43:18,168 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:43:18,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:43:18,173 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:43:18,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:43:18,183 [ scc.git] DEBUG Already up to date. 2024-09-18 00:43:18,183 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-18 00:43:18,505 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-18 00:43:18,505 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-18 00:43:18,510 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:43:18,510 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:43:18,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:43:18,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-18 00:43:18,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:43:18,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-18 00:43:18,552 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:43:18,554 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-18 00:43:18,554 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-18 00:43:18,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:43:18,691 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:43:18,763 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-18 00:43:18,764 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:43:18,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:43:18,768 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:43:19,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbe276bbe50> has no local changes 2024-09-18 00:43:19,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:43:19,796 [ scc.git] DEBUG [detached HEAD 7a7afb1] merge master -Dorg -Snone 2024-09-18 00:43:19,796 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-18 00:43:19,796 [ scc.merge] INFO Already up to date. 2024-09-18 00:43:19,797 [ scc.merge] INFO 2024-09-18 00:43:19,797 [ scc.merge] INFO Merged PRs: 2024-09-18 00:43:19,797 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-18 00:43:19,797 [ scc.merge] INFO 2024-09-18 00:43:19,797 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-18 00:43:19,797 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-figure * [new branch] dependabot/npm_and_yarn/vite-3.2.11 -> origin/dependabot/npm_and_yarn/vite-3.2.11 Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-18 00:43:28,991 [ scc.config] DEBUG Found github.token 2024-09-18 00:43:28,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-18 00:43:29,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:43:29,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:43:29,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-18 00:43:29,935 [ scc.gh] DEBUG 4401 remaining from 5000 (Reset at 01:09 2024-09-18 00:43:29,936 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:29,940 [ scc.git] DEBUG Check current status 2024-09-18 00:43:29,940 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:29,944 [ scc.git] DEBUG 7a7afb1 merge master -Dorg -Snone 2024-09-18 00:43:29,944 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:30,003 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-18 00:43:30,006 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-18 00:43:30,009 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-18 00:43:30,012 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-18 00:43:30,022 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-18 00:43:30,026 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-18 00:43:30,030 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-18 00:43:30,034 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-18 00:43:30,038 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-18 00:43:30,041 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-18 00:43:30,044 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-18 00:43:30,047 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-18 00:43:30,050 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-18 00:43:30,054 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-18 00:43:30,058 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-18 00:43:30,061 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-18 00:43:30,064 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-18 00:43:30,067 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-18 00:43:30,070 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-18 00:43:30,073 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-18 00:43:30,076 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-18 00:43:30,079 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-18 00:43:30,084 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:30,084 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-18 00:43:30,086 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-18 00:43:30,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-18 00:43:30,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:31,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:31,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:32,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:32,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:32,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-18 00:43:32,116 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:32,120 [ scc.git] DEBUG Check current status 2024-09-18 00:43:32,120 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:32,124 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-18 00:43:32,124 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:32,164 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:32,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-18 00:43:32,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:33,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:33,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:34,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:34,208 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:34,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:34,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-18 00:43:34,252 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:34,255 [ scc.git] DEBUG Check current status 2024-09-18 00:43:34,256 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:34,259 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-18 00:43:34,260 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:34,303 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:34,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-18 00:43:35,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:35,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:35,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:36,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:36,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:36,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:36,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-18 00:43:36,414 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:36,426 [ scc.git] DEBUG Check current status 2024-09-18 00:43:36,426 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:36,432 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-18 00:43:36,432 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:36,478 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:36,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-18 00:43:37,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:37,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:38,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:38,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:38,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:38,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:38,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-18 00:43:38,519 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:38,523 [ scc.git] DEBUG Check current status 2024-09-18 00:43:38,523 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:38,528 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-18 00:43:38,528 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:38,575 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:38,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-18 00:43:39,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:39,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:40,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:40,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:40,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:40,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:40,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-18 00:43:40,629 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:40,633 [ scc.git] DEBUG Check current status 2024-09-18 00:43:40,634 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:40,639 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-18 00:43:40,639 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:40,680 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:41,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-18 00:43:41,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:41,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:42,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:42,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:42,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:42,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:42,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-18 00:43:42,839 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:42,843 [ scc.git] DEBUG Check current status 2024-09-18 00:43:42,843 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:42,848 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-18 00:43:42,848 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:42,893 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:43,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-18 00:43:43,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:44,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:44,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:44,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:44,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:45,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:45,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-18 00:43:45,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:45,031 [ scc.git] DEBUG Check current status 2024-09-18 00:43:45,031 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:45,035 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-18 00:43:45,036 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:45,087 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:45,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-18 00:43:45,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:46,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:46,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:47,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:47,170 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:47,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:47,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-18 00:43:47,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:47,216 [ scc.git] DEBUG Check current status 2024-09-18 00:43:47,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:47,221 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-18 00:43:47,221 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:47,269 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:47,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-18 00:43:48,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:48,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:48,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:49,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:49,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:49,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:49,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-18 00:43:49,371 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:49,375 [ scc.git] DEBUG Check current status 2024-09-18 00:43:49,376 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:49,380 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-18 00:43:49,380 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:49,419 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:49,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-18 00:43:50,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:50,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:51,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:51,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:51,485 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:51,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:51,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-18 00:43:51,533 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:51,538 [ scc.git] DEBUG Check current status 2024-09-18 00:43:51,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:51,543 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-18 00:43:51,543 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:51,590 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:51,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-18 00:43:52,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:52,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:53,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:53,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:53,663 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:53,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:53,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-18 00:43:53,710 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:53,714 [ scc.git] DEBUG Check current status 2024-09-18 00:43:53,715 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:53,720 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-18 00:43:53,720 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:53,768 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:54,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-18 00:43:54,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:54,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:55,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:55,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:55,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:55,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:55,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-18 00:43:55,815 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:55,820 [ scc.git] DEBUG Check current status 2024-09-18 00:43:55,820 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:55,825 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-18 00:43:55,825 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:55,875 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:56,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-18 00:43:56,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:57,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:57,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:43:57,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:43:57,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:43:57,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:43:57,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-18 00:43:57,902 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:43:57,907 [ scc.git] DEBUG Check current status 2024-09-18 00:43:57,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:43:57,912 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-18 00:43:57,912 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:43:57,958 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:43:58,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-18 00:43:58,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:43:59,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:43:59,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:00,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:00,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:00,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:00,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-18 00:44:00,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:00,081 [ scc.git] DEBUG Check current status 2024-09-18 00:44:00,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:00,086 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-18 00:44:00,086 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:00,128 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:00,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-18 00:44:00,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:01,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:01,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:02,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:02,137 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:02,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:02,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-18 00:44:02,179 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:02,184 [ scc.git] DEBUG Check current status 2024-09-18 00:44:02,184 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:02,189 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-18 00:44:02,189 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:02,236 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:02,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-18 00:44:02,537 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-18 00:44:02,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-18 00:44:03,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:03,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:04,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:04,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:04,450 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:04,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:04,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-18 00:44:04,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:04,496 [ scc.git] DEBUG Check current status 2024-09-18 00:44:04,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:04,501 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-18 00:44:04,501 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:04,547 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:04,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-18 00:44:05,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:05,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:06,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:06,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:06,745 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:06,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:06,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-18 00:44:06,785 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:06,790 [ scc.git] DEBUG Check current status 2024-09-18 00:44:06,790 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:06,795 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-18 00:44:06,796 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:06,840 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:07,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-18 00:44:07,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:08,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:09,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:09,036 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:09,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:09,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-18 00:44:09,078 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:09,082 [ scc.git] DEBUG Check current status 2024-09-18 00:44:09,083 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:09,087 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-18 00:44:09,087 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:09,133 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:09,134 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-18 00:44:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-18 00:44:09,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:10,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:10,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:11,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:11,184 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:11,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:11,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-18 00:44:11,225 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:11,230 [ scc.git] DEBUG Check current status 2024-09-18 00:44:11,231 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:11,235 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-18 00:44:11,236 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:11,277 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:11,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-18 00:44:11,583 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-18 00:44:11,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-18 00:44:12,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:12,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:13,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:13,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:13,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:13,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:13,566 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-18 00:44:13,566 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:13,572 [ scc.git] DEBUG Check current status 2024-09-18 00:44:13,572 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:13,578 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-18 00:44:13,578 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:13,626 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:13,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-18 00:44:13,963 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-18 00:44:14,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-18 00:44:14,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:15,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:15,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:16,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:16,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:16,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:16,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-18 00:44:16,067 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:16,072 [ scc.git] DEBUG Check current status 2024-09-18 00:44:16,073 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:16,079 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-18 00:44:16,079 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:16,131 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:16,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-18 00:44:16,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:17,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:17,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:18,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:18,207 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:18,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:18,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-18 00:44:18,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-18 00:44:18,260 [ scc.git] DEBUG Check current status 2024-09-18 00:44:18,261 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:18,266 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-18 00:44:18,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:18,315 [ scc.config] DEBUG Found remote.origin.url 2024-09-18 00:44:18,317 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-18 00:44:18,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-18 00:44:18,663 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-18 00:44:18,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-18 00:44:19,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-18 00:44:19,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-18 00:44:20,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:20,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-18 00:44:20,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:20,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:20,550 [ scc.git] DEBUG Resetting... 2024-09-18 00:44:20,550 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-18 00:44:20,560 [ scc.git] DEBUG HEAD is now at 7a7afb1 merge master -Dorg -Snone 2024-09-18 00:44:20,560 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-18 00:44:20,687 [ scc.git] DEBUG Check current status 2024-09-18 00:44:20,687 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-18 00:44:20,693 [ scc.git] DEBUG 7a7afb1 merge master -Dorg -Snone 2024-09-18 00:44:20,693 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-18 00:44:20,747 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-18 00:44:20,751 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-18 00:44:20,755 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-18 00:44:20,759 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-18 00:44:20,770 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-18 00:44:20,773 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-18 00:44:20,777 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-18 00:44:20,781 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-18 00:44:20,784 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-18 00:44:20,788 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-18 00:44:20,791 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-18 00:44:20,795 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-18 00:44:20,799 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-18 00:44:20,803 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-18 00:44:20,808 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-18 00:44:20,812 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-18 00:44:20,817 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-18 00:44:20,820 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-18 00:44:20,824 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-18 00:44:20,827 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-18 00:44:20,831 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-18 00:44:20,835 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-18 00:44:20,836 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-18 00:44:20,836 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-18 00:44:20,836 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-18 00:44:20,836 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-18 00:44:20,837 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-18 00:44:20,837 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-18 00:44:20,837 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:21,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-18 00:44:21,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-18 00:44:21,587 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:44:22,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-18 00:44:22,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:23,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-18 00:44:23,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:23,577 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-18 00:44:23,577 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:44:23,577 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:23,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:23,587 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:44:23,595 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:44:23,596 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:44:23,604 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:44:23,613 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:23,614 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-18 00:44:23,955 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-18 00:44:23,955 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-18 00:44:23,962 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:44:23,962 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:23,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:23,968 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-18 00:44:23,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:23,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-18 00:44:23,987 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:24,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:24,118 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:44:24,184 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:24,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:24,198 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:24,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-18 00:44:25,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-18 00:44:25,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-18 00:44:26,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:26,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:44:26,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-18 00:44:27,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:27,392 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-18 00:44:27,392 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:44:27,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-18 00:44:27,392 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:27,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:27,398 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:44:27,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:44:27,406 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:44:27,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:44:27,420 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:27,421 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-18 00:44:28,032 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-18 00:44:28,032 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-18 00:44:28,038 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:44:28,038 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:28,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:28,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-18 00:44:28,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:28,058 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-18 00:44:28,099 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:44:28,102 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-18 00:44:28,102 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-18 00:44:28,102 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-18 00:44:28,102 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-18 00:44:28,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:28,241 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:44:28,291 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:28,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:28,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:28,343 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:44:28,350 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bccd55b50> has no local changes 2024-09-18 00:44:28,350 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:44:28,361 [ scc.git] DEBUG [detached HEAD 48f98af] merge master -Dorg -Ssuccess-only 2024-09-18 00:44:28,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:28,362 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:28,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-18 00:44:29,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-18 00:44:29,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-18 00:44:30,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-18 00:44:30,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:31,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:44:31,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-18 00:44:32,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:32,244 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-18 00:44:32,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-18 00:44:33,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-18 00:44:33,161 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:44:33,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-18 00:44:33,161 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:33,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:33,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:44:33,172 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:44:33,172 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:44:33,177 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:44:33,187 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:33,190 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-18 00:44:33,640 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-18 00:44:33,641 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-18 00:44:33,645 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:44:33,645 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:33,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:33,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-18 00:44:33,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:33,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-18 00:44:33,669 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:44:33,671 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-18 00:44:33,671 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-18 00:44:33,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:33,817 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:44:33,867 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:33,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:33,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:33,914 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:44:33,921 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc483850> has no local changes 2024-09-18 00:44:33,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:44:33,931 [ scc.git] DEBUG [detached HEAD 6d65a0c] merge master -Dorg -Ssuccess-only 2024-09-18 00:44:33,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:33,932 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:34,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-18 00:44:34,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-18 00:44:35,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-18 00:44:35,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-18 00:44:36,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-18 00:44:36,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-18 00:44:37,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:37,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-18 00:44:38,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:38,232 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-18 00:44:38,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-18 00:44:39,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-18 00:44:39,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-18 00:44:40,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-18 00:44:40,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-18 00:44:40,506 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:44:40,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-18 00:44:40,506 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:40,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:40,512 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:44:40,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:44:40,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:44:40,524 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:44:40,534 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:40,535 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-18 00:44:41,275 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-18 00:44:41,275 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-18 00:44:41,281 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:44:41,281 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:41,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:41,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-18 00:44:41,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:41,304 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-18 00:44:41,389 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-18 00:44:41,390 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:44:41,396 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-18 00:44:41,397 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-18 00:44:41,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:41,558 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:44:41,603 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:41,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:41,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:41,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:44:41,663 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bccd55a60> has no local changes 2024-09-18 00:44:41,664 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:44:41,676 [ scc.git] DEBUG [detached HEAD 178dcc3] merge master -Dorg -Ssuccess-only 2024-09-18 00:44:41,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:41,677 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:42,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-18 00:44:42,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-18 00:44:42,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-18 00:44:43,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-18 00:44:44,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-18 00:44:44,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:44:45,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-18 00:44:45,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:46,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-18 00:44:46,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-18 00:44:46,816 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-18 00:44:47,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-18 00:44:47,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-18 00:44:48,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-18 00:44:48,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-18 00:44:49,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:49,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-18 00:44:50,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:50,206 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-18 00:44:50,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-18 00:44:51,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-18 00:44:51,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-18 00:44:52,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:52,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-18 00:44:53,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:53,033 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-18 00:44:53,033 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:44:53,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-18 00:44:53,034 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:53,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:53,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:44:53,047 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:44:53,047 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:44:53,054 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:44:53,060 [ scc.git] DEBUG Already up to date. 2024-09-18 00:44:53,060 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-18 00:44:53,405 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-18 00:44:53,406 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-18 00:44:53,411 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-18 00:44:53,771 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-18 00:44:53,771 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-18 00:44:53,779 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-18 00:44:54,306 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-18 00:44:54,306 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-18 00:44:54,311 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:44:54,311 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:54,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:54,318 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-18 00:44:54,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:54,333 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-18 00:44:54,416 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-18 00:44:54,416 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-18 00:44:54,416 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-18 00:44:54,416 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:44:54,416 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:44:54,423 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-18 00:44:54,443 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-18 00:44:54,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:54,631 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-18 00:44:54,640 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-18 00:44:54,649 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-18 00:44:54,656 [ scc.config] DEBUG Found github.token 2024-09-18 00:44:54,657 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-18 00:44:54,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-18 00:44:54,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:54,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-18 00:44:54,699 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-18 00:44:54,700 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-18 00:44:54,700 [ scc.git] DEBUG Auto-merging setup.py 2024-09-18 00:44:54,700 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-18 00:44:54,700 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-18 00:44:54,700 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-18 00:44:54,700 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-18 00:44:54,700 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:44:54,701 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:44:54,708 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-18 00:44:54,717 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-18 00:44:55,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:55,014 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-18 00:44:55,024 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-18 00:44:55,032 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-09-18 00:44:55,037 [ scc.config] DEBUG Found github.token 2024-09-18 00:44:55,037 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-18 00:44:55,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-18 00:44:55,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:55,051 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-18 00:44:55,066 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-18 00:44:55,066 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-18 00:44:55,066 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:44:55,070 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-18 00:44:55,070 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-18 00:44:55,070 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-18 00:44:55,070 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-18 00:44:55,071 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-18 00:44:55,071 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-18 00:44:55,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:44:55,390 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:44:55,435 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:44:55,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:44:55,442 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:44:55,484 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:44:55,491 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc44e2e0> has no local changes 2024-09-18 00:44:55,491 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:44:55,500 [ scc.git] DEBUG [detached HEAD 7d4bb2e] merge master -Dorg -Ssuccess-only 2024-09-18 00:44:55,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:44:55,500 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:44:56,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-18 00:44:56,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/590 HTTP/1.1" 200 None 2024-09-18 00:44:56,471 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:44:56,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-18 00:44:57,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:44:57,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:44:58,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-18 00:44:58,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/a7d483b1917b72d90c571703f5d4187bcb7711f9?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:44:58,745 [ scc.repo] DEBUG - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-18 00:44:59,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-09-18 00:44:59,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-09-18 00:44:59,686 [ scc.repo] DEBUG # ... Include label: include 2024-09-18 00:45:00,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/afacde4aeed888ad5d8a591d5da444df4841aa4c HTTP/1.1" 200 None 2024-09-18 00:45:00,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/afacde4aeed888ad5d8a591d5da444df4841aa4c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:01,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/afacde4aeed888ad5d8a591d5da444df4841aa4c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:01,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/588 HTTP/1.1" 200 None 2024-09-18 00:45:01,566 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:45:02,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd HTTP/1.1" 200 None 2024-09-18 00:45:02,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:03,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:03,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-18 00:45:04,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-18 00:45:04,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:04,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:05,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-18 00:45:05,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:05,864 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-18 00:45:06,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-18 00:45:06,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-18 00:45:06,783 [ scc.repo] DEBUG # ... Include label: include 2024-09-18 00:45:07,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-18 00:45:07,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:08,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:08,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-18 00:45:09,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:09,176 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-18 00:45:09,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-18 00:45:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-18 00:45:10,089 [ scc.repo] DEBUG # ... Include label: include 2024-09-18 00:45:10,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-18 00:45:11,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:11,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:12,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-18 00:45:12,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:12,993 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-18 00:45:13,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-18 00:45:13,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-18 00:45:14,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-18 00:45:14,482 [ scc.repo] DEBUG # ... Include label: include 2024-09-18 00:45:14,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-18 00:45:15,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:15,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:16,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-18 00:45:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:16,853 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-18 00:45:17,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-18 00:45:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-18 00:45:17,824 [ scc.repo] DEBUG # ... Include label: include 2024-09-18 00:45:18,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-18 00:45:18,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:19,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:19,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-18 00:45:20,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:20,340 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-18 00:45:20,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-18 00:45:21,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-18 00:45:21,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-18 00:45:22,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:22,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:23,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-18 00:45:23,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:23,587 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-18 00:45:24,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-18 00:45:24,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-18 00:45:25,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-18 00:45:25,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:26,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:26,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-18 00:45:26,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:26,838 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-18 00:45:26,839 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:45:26,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-18 00:45:26,840 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:26,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:26,847 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:45:26,855 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:45:26,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:45:26,865 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:45:26,875 [ scc.git] DEBUG Already up to date. 2024-09-18 00:45:26,875 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-18 00:45:28,267 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:28,267 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-18 00:45:28,274 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-18 00:45:28,727 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:28,727 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-18 00:45:28,733 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-18 00:45:29,652 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:29,653 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-18 00:45:29,659 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-18 00:45:29,960 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:29,960 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-18 00:45:29,966 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-18 00:45:31,791 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:31,791 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-18 00:45:31,798 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-18 00:45:32,113 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:32,113 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-18 00:45:32,121 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-18 00:45:32,564 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:32,564 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-18 00:45:32,571 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-09-18 00:45:32,877 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-18 00:45:32,877 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-09-18 00:45:32,884 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:45:32,885 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:32,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:32,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-18 00:45:32,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:32,922 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-18 00:45:33,560 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-18 00:45:33,560 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-18 00:45:33,560 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-18 00:45:33,560 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-18 00:45:33,560 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-18 00:45:33,561 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:33,568 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-18 00:45:33,568 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-18 00:45:33,568 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-09-18 00:45:33,568 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-18 00:45:33,571 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-09-18 00:45:33,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:33,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-18 00:45:33,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:33,742 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-18 00:45:33,815 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:33,819 [ scc.git] DEBUG setup.py | 2 +- 2024-09-18 00:45:33,821 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-18 00:45:34,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:34,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-18 00:45:34,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:34,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-18 00:45:34,756 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-18 00:45:34,757 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-18 00:45:34,757 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-18 00:45:34,757 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-18 00:45:34,757 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:45:34,757 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-18 00:45:34,757 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-18 00:45:34,757 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:45:34,765 [ scc.git] DEBUG Calling 'git reset --hard c1581600381d782cf3e562b39b990d38555bbc64' 2024-09-18 00:45:34,777 [ scc.git] DEBUG HEAD is now at c1581600 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-18 00:45:34,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:34,916 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-18 00:45:34,924 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-18 00:45:34,931 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-18 00:45:34,937 [ scc.config] DEBUG Found github.token 2024-09-18 00:45:34,937 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-18 00:45:35,751 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-18 00:45:35,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-18 00:45:35,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:35,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-18 00:45:35,837 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-18 00:45:35,837 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-18 00:45:35,837 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-18 00:45:35,838 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:35,849 [ scc.git] DEBUG .gitignore | 2 + 2024-09-18 00:45:35,849 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-18 00:45:35,849 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-18 00:45:35,849 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-18 00:45:35,849 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-18 00:45:35,849 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-18 00:45:35,849 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-18 00:45:35,850 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-18 00:45:35,850 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-18 00:45:36,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:36,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-18 00:45:36,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:36,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-18 00:45:36,268 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-18 00:45:36,270 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:36,277 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-18 00:45:36,277 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-18 00:45:36,277 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-18 00:45:36,277 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-18 00:45:36,277 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-18 00:45:36,277 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-18 00:45:36,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:36,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-18 00:45:36,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:36,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-18 00:45:36,704 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:36,709 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-18 00:45:36,709 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-18 00:45:36,710 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-18 00:45:36,710 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-18 00:45:37,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:37,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-18 00:45:37,049 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:37,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-18 00:45:37,081 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:37,085 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-18 00:45:37,085 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-18 00:45:37,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:37,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-18 00:45:37,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:37,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Bump vite from 3.2.10 to 3.2.11) a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-18 00:45:37,493 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:37,498 [ scc.git] DEBUG package-lock.json | 14 ++++++++++---- 2024-09-18 00:45:37,498 [ scc.git] DEBUG package.json | 2 +- 2024-09-18 00:45:37,498 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 5 deletions(-) 2024-09-18 00:45:37,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:37,845 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:45:37,901 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:37,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:37,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:45:37,966 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:45:37,979 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3e14c0> has no local changes 2024-09-18 00:45:37,980 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:45:38,004 [ scc.git] DEBUG [detached HEAD 3ba611bc] merge master -Dorg -Ssuccess-only 2024-09-18 00:45:38,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:45:38,005 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:45:38,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-18 00:45:38,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-18 00:45:39,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-18 00:45:39,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-18 00:45:40,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:40,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-18 00:45:41,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:41,182 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-18 00:45:41,182 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:45:41,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-18 00:45:41,183 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:41,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:41,189 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:45:41,195 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:45:41,195 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:45:41,201 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:45:41,208 [ scc.git] DEBUG Already up to date. 2024-09-18 00:45:41,209 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-18 00:45:41,578 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-18 00:45:41,579 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-18 00:45:41,591 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:45:41,592 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:41,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:41,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-18 00:45:41,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:41,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-18 00:45:41,625 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-18 00:45:41,626 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:41,629 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-18 00:45:41,629 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-18 00:45:41,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:41,767 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:45:41,818 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:41,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:41,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:45:41,924 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:45:41,933 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc432ee0> has no local changes 2024-09-18 00:45:41,933 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:45:41,948 [ scc.git] DEBUG [detached HEAD 73428f4] merge master -Dorg -Ssuccess-only 2024-09-18 00:45:41,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:45:41,949 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:45:42,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-18 00:45:42,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-18 00:45:42,723 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:45:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-18 00:45:43,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:44,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:44,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-18 00:45:45,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:45,186 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-18 00:45:45,187 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:45:45,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-18 00:45:45,188 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:45,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:45,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:45:45,215 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:45:45,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:45:45,228 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:45:45,238 [ scc.git] DEBUG Already up to date. 2024-09-18 00:45:45,239 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-18 00:45:45,577 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-18 00:45:45,577 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-18 00:45:45,587 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:45:45,587 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:45,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:45,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-18 00:45:45,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:45,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-18 00:45:45,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:45:45,640 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-18 00:45:45,640 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-18 00:45:45,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:45:45,771 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:45:45,825 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:45:45,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:45:45,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:45:45,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:45:45,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3e1fa0> has no local changes 2024-09-18 00:45:45,899 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:45:45,915 [ scc.git] DEBUG [detached HEAD 0c81746] merge master -Dorg -Ssuccess-only 2024-09-18 00:45:45,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:45:45,916 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:45:46,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-18 00:45:46,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-18 00:45:46,777 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:45:47,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-18 00:45:47,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:48,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:48,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-18 00:45:49,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:49,350 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-18 00:45:49,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-18 00:45:50,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-18 00:45:50,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-18 00:45:51,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:51,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:52,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-18 00:45:52,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:52,730 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-18 00:45:53,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-18 00:45:53,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-18 00:45:53,628 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:45:54,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-18 00:45:54,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:55,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:55,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-18 00:45:56,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:56,287 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-18 00:45:56,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-18 00:45:56,759 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:45:57,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-18 00:45:57,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:45:58,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:45:58,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-18 00:45:59,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:45:59,383 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-18 00:45:59,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-18 00:46:00,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-18 00:46:00,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-18 00:46:01,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:01,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:02,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-18 00:46:02,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:02,736 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-18 00:46:03,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-18 00:46:03,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-18 00:46:04,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-18 00:46:04,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:05,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:05,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-18 00:46:06,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:06,151 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-18 00:46:06,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-18 00:46:07,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-18 00:46:07,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-18 00:46:08,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:08,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-18 00:46:09,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:09,038 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-18 00:46:09,038 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:09,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-18 00:46:09,039 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:09,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:09,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:09,051 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:09,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:09,258 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:09,286 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:09,286 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-18 00:46:09,937 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:09,939 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-18 00:46:09,949 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-18 00:46:10,953 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:10,954 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-18 00:46:10,961 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-18 00:46:11,432 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:11,432 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-18 00:46:11,439 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-18 00:46:11,749 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:11,752 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-18 00:46:11,766 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-18 00:46:12,060 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:12,060 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-18 00:46:12,067 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-18 00:46:12,514 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:12,515 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-18 00:46:12,528 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-18 00:46:12,896 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-18 00:46:12,897 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-18 00:46:12,905 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:12,905 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:12,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:12,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-18 00:46:12,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:12,931 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-18 00:46:13,192 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-18 00:46:13,193 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:13,202 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-18 00:46:13,208 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-18 00:46:13,209 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-18 00:46:13,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:13,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-18 00:46:13,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:13,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-18 00:46:13,570 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-18 00:46:13,571 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-18 00:46:13,571 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-18 00:46:13,571 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-18 00:46:13,571 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:13,577 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-18 00:46:13,577 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-18 00:46:13,577 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-18 00:46:13,578 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-18 00:46:13,578 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-18 00:46:13,578 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-18 00:46:13,578 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-18 00:46:13,578 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-18 00:46:13,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:13,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-18 00:46:13,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:13,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-18 00:46:13,887 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-18 00:46:13,892 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:13,899 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-18 00:46:13,899 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-18 00:46:13,899 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-18 00:46:14,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:14,117 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-18 00:46:14,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:14,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-18 00:46:14,240 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:14,254 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-18 00:46:14,256 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-18 00:46:14,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:14,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-18 00:46:14,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:14,571 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-18 00:46:14,736 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-18 00:46:14,737 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:14,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:14,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-18 00:46:14,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:14,949 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-18 00:46:15,152 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-18 00:46:15,153 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-18 00:46:15,153 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-18 00:46:15,153 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:15,158 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-18 00:46:15,159 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-18 00:46:15,159 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-18 00:46:15,159 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-18 00:46:15,159 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-18 00:46:15,159 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-18 00:46:15,159 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-18 00:46:15,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:15,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-18 00:46:15,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:15,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-18 00:46:15,464 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-18 00:46:15,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:15,484 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-18 00:46:15,485 [ scc.git] DEBUG package.json | 2 +- 2024-09-18 00:46:15,485 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-18 00:46:15,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:15,685 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:15,731 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:15,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:15,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:15,798 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:15,832 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc407be0> has no local changes 2024-09-18 00:46:15,834 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:15,869 [ scc.git] DEBUG [detached HEAD 1ace39e] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:15,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:15,872 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:16,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-18 00:46:16,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-18 00:46:17,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-18 00:46:17,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-18 00:46:18,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:18,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:19,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-18 00:46:19,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:19,579 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-18 00:46:19,579 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:19,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-18 00:46:19,580 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:19,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:19,591 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:19,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:19,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:19,614 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:19,624 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:19,624 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-18 00:46:19,961 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-18 00:46:19,961 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-18 00:46:19,971 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:19,971 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:19,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:19,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-18 00:46:19,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:20,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-18 00:46:20,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:20,023 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-18 00:46:20,029 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-18 00:46:20,030 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-18 00:46:20,031 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-18 00:46:20,031 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-18 00:46:20,031 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-18 00:46:20,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:20,163 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:20,272 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:20,274 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:20,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:20,338 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:20,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3b07f0> has no local changes 2024-09-18 00:46:20,347 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:20,359 [ scc.git] DEBUG [detached HEAD cd8f280] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:20,360 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:20,360 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:20,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-18 00:46:21,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-18 00:46:21,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-18 00:46:22,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-18 00:46:22,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:22,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-18 00:46:23,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:23,404 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-18 00:46:23,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-18 00:46:24,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-18 00:46:24,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-18 00:46:25,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:25,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-18 00:46:26,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:26,125 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-18 00:46:26,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-18 00:46:27,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-18 00:46:27,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-18 00:46:28,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:28,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-18 00:46:28,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:28,930 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-18 00:46:28,930 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:28,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-18 00:46:28,931 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:28,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:28,938 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:28,945 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:28,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:28,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:28,983 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:28,984 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-18 00:46:29,679 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-18 00:46:29,679 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-18 00:46:29,685 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-18 00:46:30,311 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-18 00:46:30,312 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-18 00:46:30,318 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-18 00:46:30,676 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-18 00:46:30,676 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-18 00:46:30,698 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:30,698 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:30,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:30,705 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-18 00:46:30,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:30,720 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-18 00:46:30,856 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-18 00:46:30,857 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-18 00:46:30,857 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-18 00:46:30,857 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-18 00:46:30,857 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:46:30,857 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:46:30,864 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-18 00:46:30,873 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-18 00:46:30,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:31,001 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-18 00:46:31,008 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-18 00:46:31,015 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-09-18 00:46:31,021 [ scc.config] DEBUG Found github.token 2024-09-18 00:46:31,021 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-18 00:46:31,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-18 00:46:31,031 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:31,037 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-18 00:46:31,058 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-18 00:46:31,058 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-18 00:46:31,058 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-18 00:46:31,059 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:46:31,059 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:46:31,066 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-18 00:46:31,075 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-18 00:46:31,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:31,387 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-18 00:46:31,394 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-18 00:46:31,402 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-18 00:46:31,408 [ scc.config] DEBUG Found github.token 2024-09-18 00:46:31,409 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-18 00:46:31,409 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-18 00:46:31,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:31,422 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-18 00:46:31,435 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:31,437 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-18 00:46:31,438 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-18 00:46:31,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:31,802 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:31,849 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:31,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:31,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:31,903 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:31,911 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3b0580> has no local changes 2024-09-18 00:46:31,911 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:31,922 [ scc.git] DEBUG [detached HEAD 274b20b] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:31,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:31,922 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:32,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-18 00:46:32,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-18 00:46:32,828 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:46:33,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-18 00:46:33,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:34,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:34,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-18 00:46:35,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:35,204 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-18 00:46:35,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-18 00:46:35,642 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:46:36,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-18 00:46:36,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:37,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:37,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-18 00:46:38,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:38,114 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-18 00:46:38,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-18 00:46:38,564 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-18 00:46:39,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-18 00:46:39,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:40,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:46:40,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-18 00:46:41,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:41,035 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-18 00:46:41,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-18 00:46:41,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-18 00:46:42,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-18 00:46:42,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-18 00:46:43,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-18 00:46:43,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-18 00:46:43,762 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:43,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-18 00:46:43,763 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:43,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:43,769 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:43,776 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:43,777 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:43,784 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:43,791 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:43,791 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-18 00:46:44,095 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-18 00:46:44,095 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-18 00:46:44,100 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-18 00:46:44,396 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-18 00:46:44,397 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-18 00:46:44,403 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-18 00:46:44,707 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-18 00:46:44,707 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-18 00:46:44,714 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:44,714 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:44,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:44,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-18 00:46:44,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:44,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-18 00:46:44,763 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:44,767 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-18 00:46:44,767 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-18 00:46:44,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:44,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-18 00:46:44,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:44,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-18 00:46:45,224 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-18 00:46:45,225 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:45,228 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-18 00:46:45,228 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-18 00:46:45,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:45,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-18 00:46:45,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:45,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-18 00:46:45,395 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-18 00:46:45,396 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:45,400 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-18 00:46:45,400 [ scc.git] DEBUG package.json | 2 +- 2024-09-18 00:46:45,400 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-18 00:46:45,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:45,753 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:45,804 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:45,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:45,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:45,858 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:45,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3e8c70> has no local changes 2024-09-18 00:46:45,869 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:45,883 [ scc.git] DEBUG [detached HEAD 9169356] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:45,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:45,884 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:46,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-18 00:46:46,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-18 00:46:47,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-18 00:46:47,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:48,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-18 00:46:48,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:48,658 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-18 00:46:48,658 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:48,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-18 00:46:48,659 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:48,659 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:48,669 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:48,679 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:48,679 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:48,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:48,698 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:48,698 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-18 00:46:49,032 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-18 00:46:49,032 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-18 00:46:49,046 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:49,046 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:49,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:49,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-18 00:46:49,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:49,084 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-18 00:46:49,098 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:49,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:49,263 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:49,351 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:49,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:49,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:49,437 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:49,446 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc416be0> has no local changes 2024-09-18 00:46:49,447 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:49,468 [ scc.git] DEBUG [detached HEAD a2d23fd] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:49,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:49,469 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:49,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-18 00:46:50,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-18 00:46:50,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-18 00:46:51,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-18 00:46:51,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-18 00:46:52,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:52,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-18 00:46:53,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:53,125 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-18 00:46:53,125 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:53,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-18 00:46:53,126 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:53,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:53,133 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:53,138 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:53,138 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:53,144 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:53,151 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:53,151 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-18 00:46:53,674 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-18 00:46:53,675 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-18 00:46:53,680 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:53,680 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:53,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:53,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-18 00:46:53,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:53,729 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-18 00:46:53,743 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-18 00:46:53,744 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:46:53,747 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-18 00:46:53,748 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-18 00:46:53,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:53,909 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:53,962 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:53,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:53,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:54,018 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:54,025 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc408a30> has no local changes 2024-09-18 00:46:54,025 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:54,035 [ scc.git] DEBUG [detached HEAD 510293b] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:54,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:54,035 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:54,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-18 00:46:54,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-18 00:46:55,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-18 00:46:55,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-18 00:46:56,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:46:56,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-18 00:46:57,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:46:57,355 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-18 00:46:57,355 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:46:57,355 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-18 00:46:57,355 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:57,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:57,361 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:46:57,366 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:46:57,367 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:46:57,373 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:46:57,379 [ scc.git] DEBUG Already up to date. 2024-09-18 00:46:57,380 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-18 00:46:57,856 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-18 00:46:57,856 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-18 00:46:57,862 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:46:57,862 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:57,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:57,868 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-18 00:46:57,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:57,882 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-18 00:46:58,049 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG Auto-merging setup.py 2024-09-18 00:46:58,049 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-18 00:46:58,050 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:46:58,050 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:46:58,057 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-18 00:46:58,065 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-18 00:46:58,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:46:58,203 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-18 00:46:58,209 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-18 00:46:58,216 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py --conflicts 2024-09-18 00:46:58,222 [ scc.config] DEBUG Found github.token 2024-09-18 00:46:58,222 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-18 00:46:58,222 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:46:58,261 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:46:58,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:46:58,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:46:58,315 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:46:58,324 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3784c0> has no local changes 2024-09-18 00:46:58,324 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:46:58,335 [ scc.git] DEBUG [detached HEAD 30e96f8] merge master -Dorg -Ssuccess-only 2024-09-18 00:46:58,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:46:58,336 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:46:58,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-18 00:46:59,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-18 00:46:59,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-18 00:47:00,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-18 00:47:00,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:47:01,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-18 00:47:01,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:47:01,463 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-18 00:47:01,463 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:01,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-18 00:47:01,463 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:01,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:01,470 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:01,477 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:01,477 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:01,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:01,491 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:01,491 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-18 00:47:02,055 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-18 00:47:02,055 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-18 00:47:02,060 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:02,060 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:02,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-18 00:47:02,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-18 00:47:02,093 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-18 00:47:02,096 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-18 00:47:02,099 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-18 00:47:02,099 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-18 00:47:02,100 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-18 00:47:02,100 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-18 00:47:02,100 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-18 00:47:02,100 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-18 00:47:02,100 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-18 00:47:02,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:02,226 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:02,278 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:02,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,291 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:02,338 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:02,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc3d8f40> has no local changes 2024-09-18 00:47:02,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:02,358 [ scc.git] DEBUG [detached HEAD a5a7031] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:02,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:02,359 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:02,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-18 00:47:02,637 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:02,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-18 00:47:02,638 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:02,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,643 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:02,649 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:02,649 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:02,655 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:02,661 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:02,661 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:02,661 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:02,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,667 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:02,706 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:02,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:02,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:02,753 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:02,760 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc37ef10> has no local changes 2024-09-18 00:47:02,760 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:02,769 [ scc.git] DEBUG [detached HEAD 8a17f1e] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:02,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:02,770 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:03,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-18 00:47:03,053 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:03,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-18 00:47:03,054 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:03,054 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:03,060 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:03,066 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:03,066 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:03,072 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:03,079 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:03,080 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:03,080 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:03,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:03,086 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:03,139 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:03,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:03,156 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:03,211 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:03,218 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc31e940> has no local changes 2024-09-18 00:47:03,218 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:03,226 [ scc.git] DEBUG [detached HEAD 6cd55b4] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:03,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:03,227 [ scc.git] INFO Overriding base-branch from master to main 2024-09-18 00:47:03,227 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:03,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-18 00:47:04,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-18 00:47:04,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-18 00:47:04,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-18 00:47:05,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-18 00:47:05,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:47:06,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-18 00:47:06,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:47:06,823 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-18 00:47:06,823 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:06,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-18 00:47:06,823 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:06,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:06,830 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-18 00:47:06,836 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:06,836 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-18 00:47:06,842 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-18 00:47:06,850 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:06,850 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-18 00:47:07,184 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-18 00:47:07,185 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-18 00:47:07,190 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:07,190 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:07,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-18 00:47:07,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-18 00:47:07,220 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-18 00:47:07,220 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-18 00:47:07,220 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:47:07,220 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:47:07,227 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-18 00:47:07,234 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-18 00:47:07,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:07,364 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-18 00:47:07,371 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-18 00:47:07,378 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-18 00:47:07,384 [ scc.config] DEBUG Found github.token 2024-09-18 00:47:07,384 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-18 00:47:07,384 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:07,441 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:07,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,487 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:07,549 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:07,556 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc350670> has no local changes 2024-09-18 00:47:07,557 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:07,567 [ scc.git] DEBUG [detached HEAD a417657] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:07,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:07,568 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:07,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-18 00:47:07,836 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:07,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-18 00:47:07,836 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:07,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,843 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:07,848 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:07,849 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:07,858 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:07,875 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:07,875 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:07,875 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:07,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,884 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:07,936 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:07,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:07,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:08,013 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:08,021 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc34de80> has no local changes 2024-09-18 00:47:08,021 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:08,032 [ scc.git] DEBUG [detached HEAD 0f01814] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:08,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:08,033 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:08,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-18 00:47:08,240 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:08,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-18 00:47:08,240 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:08,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:08,247 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:08,253 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:08,254 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:08,261 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:08,270 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:08,270 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:08,270 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:08,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:08,278 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:08,327 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:08,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:08,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:08,374 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:08,383 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc2f6640> has no local changes 2024-09-18 00:47:08,383 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:08,395 [ scc.git] DEBUG [detached HEAD 23480df] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:08,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:08,396 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:08,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-18 00:47:09,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-18 00:47:09,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-18 00:47:10,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-18 00:47:10,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:47:11,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-18 00:47:11,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:47:11,409 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-18 00:47:11,409 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:11,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-18 00:47:11,409 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:11,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:11,417 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-18 00:47:11,424 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:11,424 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-18 00:47:11,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-18 00:47:11,439 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:11,439 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-18 00:47:11,894 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-18 00:47:11,894 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-18 00:47:11,899 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:11,899 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:11,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:11,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-18 00:47:11,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:11,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-18 00:47:12,072 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-18 00:47:12,072 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-18 00:47:12,072 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:47:12,072 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:47:12,081 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-18 00:47:12,090 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-18 00:47:12,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:12,221 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-18 00:47:12,230 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-18 00:47:12,251 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-18 00:47:12,267 [ scc.config] DEBUG Found github.token 2024-09-18 00:47:12,268 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-18 00:47:12,269 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:12,326 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:12,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:12,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:12,381 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:12,395 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc307d90> has no local changes 2024-09-18 00:47:12,398 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:12,425 [ scc.git] DEBUG [detached HEAD 63c82be] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:12,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:12,427 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-18 00:47:12,427 [ scc.repo] DEBUG ## PRs found: 2024-09-18 00:47:12,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-18 00:47:13,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-18 00:47:13,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-18 00:47:14,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:47:14,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-18 00:47:15,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-18 00:47:15,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:47:15,520 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-18 00:47:15,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-18 00:47:16,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-18 00:47:16,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-18 00:47:17,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-18 00:47:17,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-18 00:47:18,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-18 00:47:18,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-18 00:47:19,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-18 00:47:19,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-18 00:47:20,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-18 00:47:20,016 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-18 00:47:20,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-18 00:47:21,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-18 00:47:21,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-18 00:47:22,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-18 00:47:22,062 [ scc.repo] DEBUG ## Branches found: 2024-09-18 00:47:22,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-18 00:47:22,062 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:22,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:22,072 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-18 00:47:22,082 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-18 00:47:22,082 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-18 00:47:22,090 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-18 00:47:22,099 [ scc.git] DEBUG Already up to date. 2024-09-18 00:47:22,099 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-18 00:47:22,847 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-18 00:47:22,847 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-18 00:47:22,855 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-18 00:47:23,381 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-18 00:47:23,381 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-18 00:47:23,387 [ scc.git] DEBUG ## Unique users: [] 2024-09-18 00:47:23,388 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:23,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:23,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-18 00:47:23,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:23,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-18 00:47:23,535 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-18 00:47:23,535 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-18 00:47:23,535 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-18 00:47:23,536 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-18 00:47:23,546 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-18 00:47:23,557 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-18 00:47:23,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:23,700 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-18 00:47:23,710 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-18 00:47:23,717 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#188](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-18 00:47:23,725 [ scc.config] DEBUG Found github.token 2024-09-18 00:47:23,726 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-18 00:47:23,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-18 00:47:23,734 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:23,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-18 00:47:23,754 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-18 00:47:23,757 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-18 00:47:23,757 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-18 00:47:24,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:24,084 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-18 00:47:24,137 [ scc.git] DEBUG Get sha1 of %s 2024-09-18 00:47:24,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-18 00:47:24,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:24,195 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:24,206 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcc354e20> has no local changes 2024-09-18 00:47:24,206 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:24,221 [ scc.git] DEBUG [detached HEAD b2cbf9b] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:24,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:24,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-18 00:47:24,322 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-18 00:47:24,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:24,497 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-18 00:47:24,506 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-18 00:47:24,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:24,886 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-18 00:47:24,895 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-18 00:47:25,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:25,284 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-18 00:47:25,294 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-18 00:47:25,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:25,665 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-18 00:47:26,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:26,037 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-18 00:47:26,045 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-18 00:47:26,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:26,424 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-18 00:47:26,431 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-18 00:47:26,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:26,812 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-18 00:47:26,820 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-18 00:47:27,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:27,198 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-18 00:47:27,205 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-18 00:47:27,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:27,578 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-18 00:47:27,585 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-18 00:47:27,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:27,963 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-18 00:47:27,970 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-18 00:47:28,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:28,351 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-18 00:47:28,356 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-18 00:47:28,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:28,736 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-18 00:47:28,742 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-18 00:47:29,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:29,132 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-18 00:47:29,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:29,537 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-18 00:47:29,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:29,902 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-18 00:47:29,908 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-18 00:47:30,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:30,292 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-18 00:47:30,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:30,669 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-18 00:47:31,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:31,055 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-18 00:47:31,062 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-18 00:47:31,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:31,436 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-18 00:47:31,443 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-18 00:47:31,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:31,839 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-18 00:47:31,851 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-18 00:47:32,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:32,224 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-18 00:47:32,230 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-18 00:47:32,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-18 00:47:32,673 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-18 00:47:32,673 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-18 00:47:32,780 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7bcda27e50> has local changes 2024-09-18 00:47:32,780 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#188 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/188/)' 2024-09-18 00:47:32,797 [ scc.git] DEBUG [detached HEAD ca697dc] merge master -Dorg -Ssuccess-only 2024-09-18 00:47:32,797 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-18 00:47:32,797 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-18 00:47:32,798 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,798 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,798 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,798 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-18 00:47:32,798 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,798 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,798 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,798 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-18 00:47:32,798 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,798 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-18 00:47:32,798 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,798 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,798 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-18 00:47:32,798 [ scc.merge] INFO 2024-09-18 00:47:32,799 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-18 00:47:32,799 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-18 00:47:32,799 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,799 [ scc.merge] INFO 2024-09-18 00:47:32,799 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-18 00:47:32,799 [ scc.merge] INFO 2024-09-18 00:47:32,799 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-18 00:47:32,799 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-18 00:47:32,799 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,799 [ scc.merge] INFO 2024-09-18 00:47:32,799 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-18 00:47:32,799 [ scc.merge] INFO 2024-09-18 00:47:32,799 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-18 00:47:32,799 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-18 00:47:32,799 [ scc.merge] INFO 2024-09-18 00:47:32,800 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-18 00:47:32,800 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-18 00:47:32,800 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,800 [ scc.merge] INFO 2024-09-18 00:47:32,800 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-18 00:47:32,800 [ scc.merge] INFO 2024-09-18 00:47:32,800 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,800 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-18 00:47:32,800 [ scc.merge] INFO 2024-09-18 00:47:32,800 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-18 00:47:32,800 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,801 [ scc.merge] INFO 2024-09-18 00:47:32,801 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-18 00:47:32,801 [ scc.merge] INFO 2024-09-18 00:47:32,801 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-18 00:47:32,801 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,801 [ scc.merge] INFO 2024-09-18 00:47:32,801 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-18 00:47:32,801 [ scc.merge] INFO 2024-09-18 00:47:32,801 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-18 00:47:32,801 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-18 00:47:32,801 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,801 [ scc.merge] INFO 2024-09-18 00:47:32,801 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-18 00:47:32,801 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-18 00:47:32,802 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-18 00:47:32,802 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-18 00:47:32,802 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-18 00:47:32,802 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-18 00:47:32,802 [ scc.merge] INFO 2024-09-18 00:47:32,802 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-18 00:47:32,803 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-18 00:47:32,803 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,803 [ scc.merge] INFO 2024-09-18 00:47:32,803 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-18 00:47:32,803 [ scc.merge] INFO 2024-09-18 00:47:32,803 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-18 00:47:32,803 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,803 [ scc.merge] INFO 2024-09-18 00:47:32,803 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-18 00:47:32,803 [ scc.merge] INFO 2024-09-18 00:47:32,803 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-18 00:47:32,803 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,803 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-18 00:47:32,803 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,803 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,804 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-18 00:47:32,804 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,804 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-18 00:47:32,804 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,804 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-18 00:47:32,804 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-18 00:47:32,804 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,804 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-18 00:47:32,805 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,805 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-18 00:47:32,805 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,805 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-18 00:47:32,805 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-18 00:47:32,805 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-18 00:47:32,805 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,805 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-18 00:47:32,805 [ scc.merge] INFO 2024-09-18 00:47:32,805 [ scc.merge] INFO Repository: ome/scripts 2024-09-18 00:47:32,806 [ scc.merge] INFO Excluded PRs: 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-18 00:47:32,806 [ scc.merge] INFO Already up to date. 2024-09-18 00:47:32,806 [ scc.merge] INFO 2024-09-18 00:47:32,806 [ scc.merge] INFO Merged PRs: 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-18 00:47:32,806 [ scc.merge] INFO 2024-09-18 00:47:32,806 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-18 00:47:32,806 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-18 00:47:32,806 [ scc.merge] INFO 2024-09-18 00:47:32,806 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-18 00:47:32,806 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-18 00:47:32,814 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-18 00:47:32,821 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,830 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-18 00:47:32,830 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-18 00:47:32,839 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-18 00:47:32,845 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-18 00:47:32,851 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-18 00:47:32,858 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-18 00:47:32,864 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-18 00:47:32,870 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-18 00:47:32,876 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-18 00:47:32,883 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-18 00:47:32,890 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,897 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-18 00:47:32,897 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-18 00:47:32,905 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-18 00:47:32,911 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,917 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-18 00:47:32,917 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-18 00:47:32,923 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-18 00:47:32,928 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-18 00:47:32,937 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-18 00:47:32,949 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-18 00:47:32,955 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-18 00:47:32,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-18 00:47:32,962 [ scc.git] DEBUG Calling 'git remote' 2024-09-18 00:47:32,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 0bbc6e4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 16f0d7b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-18 00:48:19,717 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-18 00:48:28,719 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-18 00:48:31,032 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-18 00:48:35,390 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-18 00:49:16,049 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS