![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 217 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 188 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-20 16:19:57,733 [ scc.config] DEBUG Found github.token 2024-09-20 16:19:57,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-20 16:19:57,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:19:58,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:19:58,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-20 16:19:58,731 [ scc.gh] DEBUG 4294 remaining from 5000 (Reset at 16:09 2024-09-20 16:19:58,731 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:19:58,736 [ scc.git] DEBUG Check current status 2024-09-20 16:19:58,736 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:19:58,739 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-20 16:19:58,739 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:19:58,789 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-20 16:19:58,792 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-20 16:19:58,794 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-20 16:19:58,797 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-20 16:19:58,802 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-20 16:19:58,804 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-20 16:19:58,807 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-20 16:19:58,828 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-20 16:19:58,833 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-20 16:19:58,837 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-20 16:19:58,840 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-20 16:19:58,843 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-20 16:19:58,846 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-20 16:19:58,849 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-20 16:19:58,885 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-20 16:19:58,888 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-20 16:19:58,892 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-20 16:19:58,895 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-20 16:19:58,898 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-20 16:19:58,901 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-20 16:19:58,904 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-20 16:19:58,907 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-20 16:19:58,911 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:19:59,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-20 16:19:59,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:00,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:00,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:00,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:00,913 [ scc.git] DEBUG Resetting... 2024-09-20 16:20:00,913 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-20 16:20:00,925 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-20 16:20:00,926 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-20 16:20:01,075 [ scc.git] DEBUG Check current status 2024-09-20 16:20:01,076 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:01,084 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-20 16:20:01,085 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:01,146 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-20 16:20:01,149 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-20 16:20:01,151 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-20 16:20:01,154 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-20 16:20:01,159 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-20 16:20:01,162 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-20 16:20:01,165 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-20 16:20:01,168 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-20 16:20:01,171 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-20 16:20:01,174 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-20 16:20:01,178 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-20 16:20:01,181 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-20 16:20:01,184 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-20 16:20:01,187 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-20 16:20:01,190 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-20 16:20:01,193 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-20 16:20:01,196 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-20 16:20:01,199 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-20 16:20:01,201 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-20 16:20:01,205 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-20 16:20:01,208 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-20 16:20:01,212 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-20 16:20:01,212 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-20 16:20:01,213 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-20 16:20:01,213 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-20 16:20:01,213 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-20 16:20:01,213 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-20 16:20:01,213 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:20:01,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-20 16:20:01,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-20 16:20:01,942 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:20:01,942 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-20 16:20:01,942 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:20:01,942 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:20:01,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:20:01,946 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:20:01,950 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:20:01,950 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:20:01,954 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:20:01,957 [ scc.git] DEBUG Already up to date. 2024-09-20 16:20:01,958 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-20 16:20:02,279 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-20 16:20:02,279 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-20 16:20:02,285 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:20:02,285 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:20:02,286 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:20:02,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-20 16:20:02,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:20:02,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-20 16:20:02,331 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:20:02,333 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-20 16:20:02,334 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-20 16:20:02,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:20:02,474 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:20:02,762 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-20 16:20:02,766 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:20:02,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:20:02,787 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:20:03,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9fb567b80> has no local changes 2024-09-20 16:20:03,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:20:03,727 [ scc.git] DEBUG [detached HEAD c88ace7] merge master -Dorg -Snone 2024-09-20 16:20:03,727 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-20 16:20:03,727 [ scc.merge] INFO Already up to date. 2024-09-20 16:20:03,727 [ scc.merge] INFO 2024-09-20 16:20:03,727 [ scc.merge] INFO Merged PRs: 2024-09-20 16:20:03,728 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-20 16:20:03,728 [ scc.merge] INFO 2024-09-20 16:20:03,728 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-20 16:20:03,728 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-20 16:20:12,084 [ scc.config] DEBUG Found github.token 2024-09-20 16:20:12,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-20 16:20:12,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:20:12,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:20:13,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-20 16:20:13,049 [ scc.gh] DEBUG 4284 remaining from 5000 (Reset at 16:09 2024-09-20 16:20:13,051 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:13,060 [ scc.git] DEBUG Check current status 2024-09-20 16:20:13,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:13,066 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:13,067 [ scc.git] DEBUG c88ace7 merge master -Dorg -Snone 2024-09-20 16:20:13,128 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-20 16:20:13,131 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-20 16:20:13,134 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-20 16:20:13,138 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-20 16:20:14,010 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-20 16:20:14,013 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-20 16:20:14,017 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-20 16:20:14,021 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-20 16:20:14,027 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-20 16:20:14,031 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-20 16:20:14,034 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-20 16:20:14,038 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-20 16:20:14,042 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-20 16:20:14,045 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-20 16:20:14,048 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-20 16:20:14,051 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-20 16:20:14,054 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-20 16:20:14,058 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-20 16:20:14,061 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-20 16:20:14,065 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-20 16:20:14,068 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-20 16:20:14,072 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-20 16:20:14,077 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:14,077 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-20 16:20:14,080 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-20 16:20:14,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-20 16:20:14,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:15,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:15,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:16,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:16,031 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:16,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-20 16:20:16,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:16,168 [ scc.git] DEBUG Check current status 2024-09-20 16:20:16,168 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:16,175 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-20 16:20:16,175 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:16,262 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:16,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-20 16:20:16,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:17,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:17,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:18,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:18,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:18,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:18,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-20 16:20:18,322 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:18,325 [ scc.git] DEBUG Check current status 2024-09-20 16:20:18,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:18,330 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-20 16:20:18,330 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:18,377 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:18,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-20 16:20:19,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:19,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:19,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:20,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:20,397 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:20,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:20,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-20 16:20:20,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:20,444 [ scc.git] DEBUG Check current status 2024-09-20 16:20:20,444 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:20,448 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-20 16:20:20,448 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:20,491 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:20,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-20 16:20:21,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:21,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:22,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:22,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:22,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:22,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:22,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-20 16:20:22,643 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:22,647 [ scc.git] DEBUG Check current status 2024-09-20 16:20:22,648 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:22,652 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-20 16:20:22,653 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:22,712 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:23,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-20 16:20:23,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:24,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:24,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:24,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:24,857 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:24,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:24,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-20 16:20:24,914 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:24,918 [ scc.git] DEBUG Check current status 2024-09-20 16:20:24,919 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:24,924 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-20 16:20:24,924 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:24,969 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:25,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-20 16:20:25,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:26,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:26,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:27,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:27,007 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:27,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:27,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-20 16:20:27,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:27,055 [ scc.git] DEBUG Check current status 2024-09-20 16:20:27,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:27,060 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-20 16:20:27,060 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:27,102 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:27,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-20 16:20:27,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:28,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:28,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:29,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:29,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:29,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:29,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-20 16:20:29,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:29,261 [ scc.git] DEBUG Check current status 2024-09-20 16:20:29,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:29,266 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-20 16:20:29,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:29,320 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:29,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-20 16:20:30,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:30,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:30,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:31,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:31,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:31,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:31,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-20 16:20:31,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:31,454 [ scc.git] DEBUG Check current status 2024-09-20 16:20:31,454 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:31,461 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-20 16:20:31,461 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:31,514 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:31,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-20 16:20:32,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:32,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:33,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:33,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:33,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:33,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:33,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-20 16:20:33,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:33,619 [ scc.git] DEBUG Check current status 2024-09-20 16:20:33,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:33,624 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-20 16:20:33,625 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:33,671 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:34,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-20 16:20:34,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:34,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:35,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:35,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:35,829 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:35,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:35,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-20 16:20:35,877 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:35,882 [ scc.git] DEBUG Check current status 2024-09-20 16:20:35,883 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:35,888 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-20 16:20:35,889 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:35,937 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:36,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-20 16:20:36,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:37,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:37,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:38,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:38,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:38,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:38,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-20 16:20:38,079 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:38,084 [ scc.git] DEBUG Check current status 2024-09-20 16:20:38,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:38,089 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-20 16:20:38,089 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:38,138 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:38,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-20 16:20:38,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:39,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:39,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:40,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:40,258 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:40,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:40,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-20 16:20:40,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:40,313 [ scc.git] DEBUG Check current status 2024-09-20 16:20:40,313 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:40,317 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-20 16:20:40,318 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:40,362 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:40,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-20 16:20:41,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:41,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:42,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:42,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:42,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:42,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:42,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-20 16:20:42,489 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:42,495 [ scc.git] DEBUG Check current status 2024-09-20 16:20:42,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:42,500 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-20 16:20:42,500 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:42,552 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:42,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-20 16:20:43,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:43,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:44,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:44,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:44,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:44,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:44,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-20 16:20:44,664 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:44,671 [ scc.git] DEBUG Check current status 2024-09-20 16:20:44,672 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:44,678 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-20 16:20:44,678 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:44,761 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:45,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-20 16:20:45,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:45,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:46,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:46,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:46,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:46,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:46,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-20 16:20:46,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:46,740 [ scc.git] DEBUG Check current status 2024-09-20 16:20:46,740 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:46,746 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-20 16:20:46,746 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:46,791 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:47,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-20 16:20:47,093 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-20 16:20:47,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-20 16:20:47,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:48,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:48,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:48,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:48,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:49,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:49,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-20 16:20:49,039 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:49,044 [ scc.git] DEBUG Check current status 2024-09-20 16:20:49,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:49,051 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-20 16:20:49,052 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:49,100 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-20 16:20:49,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:50,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:50,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:51,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:51,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:51,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:51,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-20 16:20:51,298 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:51,304 [ scc.git] DEBUG Check current status 2024-09-20 16:20:51,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:51,309 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-20 16:20:51,309 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:51,353 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:51,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-20 16:20:52,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:52,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:52,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:53,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:53,400 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:53,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:53,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-20 16:20:53,448 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:53,454 [ scc.git] DEBUG Check current status 2024-09-20 16:20:53,454 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:53,460 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-20 16:20:53,461 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:53,508 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:53,509 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-20 16:20:53,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-20 16:20:54,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:54,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:55,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:55,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:55,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:55,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:55,579 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-20 16:20:55,579 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:55,584 [ scc.git] DEBUG Check current status 2024-09-20 16:20:55,585 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:55,589 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-20 16:20:55,590 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:55,634 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:55,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-20 16:20:55,939 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-20 16:20:56,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-20 16:20:56,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:57,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:57,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:20:57,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:20:57,893 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:20:57,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:20:57,930 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-20 16:20:57,931 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:20:57,935 [ scc.git] DEBUG Check current status 2024-09-20 16:20:57,935 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:20:57,943 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-20 16:20:57,943 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:20:58,072 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:20:58,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-20 16:20:58,304 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-20 16:20:58,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-20 16:20:59,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:20:59,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:20:59,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:21:00,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:21:00,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:00,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:00,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-20 16:21:00,357 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:21:00,362 [ scc.git] DEBUG Check current status 2024-09-20 16:21:00,363 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:21:00,368 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-20 16:21:00,368 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:21:00,417 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:21:00,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-20 16:21:01,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:21:01,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:21:02,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:21:02,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:21:02,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:02,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:02,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-20 16:21:02,555 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-20 16:21:02,559 [ scc.git] DEBUG Check current status 2024-09-20 16:21:02,559 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:21:02,564 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-20 16:21:02,564 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:21:02,608 [ scc.config] DEBUG Found remote.origin.url 2024-09-20 16:21:02,608 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-20 16:21:02,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-20 16:21:02,915 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-20 16:21:03,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-20 16:21:03,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-20 16:21:03,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-20 16:21:04,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-20 16:21:04,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-20 16:21:04,809 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:04,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:04,854 [ scc.git] DEBUG Resetting... 2024-09-20 16:21:04,854 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-20 16:21:04,863 [ scc.git] DEBUG HEAD is now at c88ace7 merge master -Dorg -Snone 2024-09-20 16:21:04,863 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-20 16:21:04,959 [ scc.git] DEBUG Check current status 2024-09-20 16:21:04,959 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-20 16:21:04,964 [ scc.git] DEBUG c88ace7 merge master -Dorg -Snone 2024-09-20 16:21:04,964 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-20 16:21:05,010 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-20 16:21:05,013 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-20 16:21:05,016 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-20 16:21:05,019 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-20 16:21:05,028 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-20 16:21:05,031 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-20 16:21:05,034 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-20 16:21:05,037 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-20 16:21:05,040 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-20 16:21:05,043 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-20 16:21:05,046 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-20 16:21:05,049 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-20 16:21:05,052 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-20 16:21:05,054 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-20 16:21:05,058 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-20 16:21:05,060 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-20 16:21:05,063 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-20 16:21:05,066 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-20 16:21:05,069 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-20 16:21:05,072 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-20 16:21:05,075 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-20 16:21:05,078 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-20 16:21:05,079 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-20 16:21:05,080 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-20 16:21:05,080 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-20 16:21:05,080 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-20 16:21:05,080 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-20 16:21:05,080 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-20 16:21:05,080 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:05,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-20 16:21:05,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-20 16:21:05,784 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:21:06,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-20 16:21:06,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:07,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-20 16:21:07,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:07,970 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-20 16:21:07,970 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:21:07,970 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:07,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:07,975 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:21:07,980 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:21:07,981 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:21:07,986 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:21:07,991 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:07,992 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-20 16:21:08,369 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-20 16:21:08,370 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-20 16:21:08,374 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:21:08,374 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:08,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:08,379 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-20 16:21:08,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:08,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-20 16:21:08,394 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:08,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:08,529 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:21:08,580 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:08,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:08,586 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:09,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-20 16:21:09,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-20 16:21:10,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-20 16:21:10,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:10,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:11,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-20 16:21:11,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:11,844 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-20 16:21:11,844 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:21:11,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-20 16:21:11,844 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:11,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:11,850 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:21:11,855 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:21:11,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:21:11,861 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:21:11,866 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:11,866 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-20 16:21:12,272 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-20 16:21:12,272 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-20 16:21:12,277 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:21:12,277 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:12,277 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:12,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-20 16:21:12,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:12,293 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-20 16:21:12,312 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:21:12,315 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-20 16:21:12,315 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-20 16:21:12,315 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-20 16:21:12,315 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-20 16:21:12,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:12,446 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:21:12,486 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:12,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:12,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:12,529 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:21:12,535 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9b8fdd30> has no local changes 2024-09-20 16:21:12,535 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:21:12,544 [ scc.git] DEBUG [detached HEAD adda5d2] merge master -Dorg -Ssuccess-only 2024-09-20 16:21:12,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:12,544 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:12,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-20 16:21:13,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-20 16:21:13,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-20 16:21:14,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-20 16:21:15,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:15,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:16,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-20 16:21:16,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:16,645 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-20 16:21:17,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-20 16:21:17,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-20 16:21:17,564 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:21:17,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-20 16:21:17,565 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:17,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:17,571 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:21:17,576 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:21:17,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:21:17,582 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:21:17,588 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:17,589 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-20 16:21:17,962 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-20 16:21:17,963 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-20 16:21:17,967 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:21:17,967 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:17,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:17,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-20 16:21:17,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:17,984 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-20 16:21:17,992 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:21:17,995 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-20 16:21:17,995 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-20 16:21:18,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:18,151 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:21:18,190 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:18,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:18,196 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:18,231 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:21:18,236 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9c39ee50> has no local changes 2024-09-20 16:21:18,237 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:21:18,246 [ scc.git] DEBUG [detached HEAD ee98608] merge master -Dorg -Ssuccess-only 2024-09-20 16:21:18,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:18,247 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:18,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-20 16:21:19,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-20 16:21:19,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-20 16:21:20,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-20 16:21:20,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-20 16:21:21,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-20 16:21:21,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:22,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-20 16:21:22,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:22,599 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-20 16:21:23,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-20 16:21:23,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-20 16:21:23,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-20 16:21:24,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-20 16:21:24,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-20 16:21:24,933 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:21:24,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-20 16:21:24,934 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:24,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:24,939 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:21:24,944 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:21:24,945 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:21:24,951 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:21:24,957 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:24,958 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-20 16:21:25,357 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-20 16:21:25,357 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-20 16:21:25,361 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:21:25,361 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:25,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:25,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-20 16:21:25,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:25,376 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-20 16:21:25,412 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-20 16:21:25,413 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:21:25,416 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-20 16:21:25,416 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-20 16:21:25,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:25,554 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:21:25,592 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:25,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:25,597 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:25,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:21:25,645 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9a5fe2e0> has no local changes 2024-09-20 16:21:25,645 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:21:25,653 [ scc.git] DEBUG [detached HEAD 755d00d] merge master -Dorg -Ssuccess-only 2024-09-20 16:21:25,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:25,654 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:26,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-20 16:21:26,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-20 16:21:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-20 16:21:27,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-20 16:21:28,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-20 16:21:28,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:29,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:29,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-20 16:21:29,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:30,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-20 16:21:30,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-20 16:21:30,821 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-20 16:21:31,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-20 16:21:31,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-20 16:21:32,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-20 16:21:32,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-20 16:21:33,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:33,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-20 16:21:34,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:34,126 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-20 16:21:34,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-20 16:21:35,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-20 16:21:35,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-20 16:21:36,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:36,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-20 16:21:36,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:36,959 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-20 16:21:36,960 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:21:36,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-20 16:21:36,960 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:36,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:36,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:21:36,971 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:21:36,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:21:36,977 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:21:36,983 [ scc.git] DEBUG Already up to date. 2024-09-20 16:21:36,983 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-20 16:21:37,358 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-20 16:21:37,359 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-20 16:21:37,364 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-20 16:21:37,688 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-20 16:21:37,688 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-20 16:21:37,692 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-20 16:21:38,038 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-20 16:21:38,039 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-20 16:21:38,043 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:21:38,043 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:38,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:38,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-20 16:21:38,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:38,061 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-20 16:21:38,121 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-20 16:21:38,122 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-20 16:21:38,122 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-20 16:21:38,122 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:21:38,122 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:21:38,128 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-20 16:21:38,135 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-20 16:21:38,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:38,275 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-20 16:21:38,283 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-20 16:21:38,289 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-20 16:21:38,294 [ scc.config] DEBUG Found github.token 2024-09-20 16:21:38,294 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-20 16:21:38,295 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-20 16:21:38,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:38,308 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-20 16:21:38,335 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-20 16:21:38,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-20 16:21:38,335 [ scc.git] DEBUG Auto-merging setup.py 2024-09-20 16:21:38,335 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-20 16:21:38,335 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-20 16:21:38,335 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-20 16:21:38,335 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-20 16:21:38,335 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:21:38,335 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:21:38,341 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-20 16:21:38,348 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-20 16:21:38,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:38,656 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-20 16:21:38,677 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-20 16:21:38,683 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-20 16:21:38,687 [ scc.config] DEBUG Found github.token 2024-09-20 16:21:38,688 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-20 16:21:38,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-20 16:21:38,693 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:38,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-20 16:21:38,709 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-20 16:21:38,710 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-20 16:21:38,710 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:21:38,713 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-20 16:21:38,713 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-20 16:21:38,713 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-20 16:21:38,713 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-20 16:21:38,713 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-20 16:21:38,713 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-20 16:21:39,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:21:39,077 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:21:39,132 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:21:39,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:21:39,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:21:39,177 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:21:39,183 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9a604880> has no local changes 2024-09-20 16:21:39,183 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:21:39,192 [ scc.git] DEBUG [detached HEAD 1863e06] merge master -Dorg -Ssuccess-only 2024-09-20 16:21:39,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:21:39,193 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:21:39,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-20 16:21:40,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-09-20 16:21:40,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/590 HTTP/1.1" 200 None 2024-09-20 16:21:40,649 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:21:41,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-20 16:21:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:42,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:42,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-20 16:21:43,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/a7d483b1917b72d90c571703f5d4187bcb7711f9?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:43,171 [ scc.repo] DEBUG - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-20 16:21:43,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-09-20 16:21:44,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-09-20 16:21:44,071 [ scc.repo] DEBUG # ... Include label: include 2024-09-20 16:21:44,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff HTTP/1.1" 200 None 2024-09-20 16:21:45,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:45,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:45,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/588 HTTP/1.1" 200 None 2024-09-20 16:21:45,923 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:21:46,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd HTTP/1.1" 200 None 2024-09-20 16:21:46,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:47,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:47,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-20 16:21:48,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-20 16:21:48,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:49,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:49,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-20 16:21:50,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:50,373 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-20 16:21:50,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-20 16:21:51,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-20 16:21:51,275 [ scc.repo] DEBUG # ... Include label: include 2024-09-20 16:21:51,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-20 16:21:52,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:52,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:53,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-20 16:21:53,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:53,688 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-20 16:21:54,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-20 16:21:54,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-20 16:21:54,625 [ scc.repo] DEBUG # ... Include label: include 2024-09-20 16:21:55,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-20 16:21:55,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:56,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:21:56,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-20 16:21:56,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:21:56,994 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-20 16:21:57,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-20 16:21:57,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-20 16:21:58,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-20 16:21:58,444 [ scc.repo] DEBUG # ... Include label: include 2024-09-20 16:21:58,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-20 16:21:59,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:21:59,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:00,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-20 16:22:00,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:00,766 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-20 16:22:01,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-20 16:22:01,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-20 16:22:01,783 [ scc.repo] DEBUG # ... Include label: include 2024-09-20 16:22:02,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-20 16:22:02,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:03,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:03,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-20 16:22:04,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:04,170 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-20 16:22:04,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-20 16:22:05,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-20 16:22:05,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-20 16:22:06,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:06,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:07,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-20 16:22:07,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:07,411 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-20 16:22:07,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-20 16:22:08,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-20 16:22:08,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-20 16:22:09,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:09,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:10,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-20 16:22:10,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:10,771 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-20 16:22:10,771 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:22:10,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-20 16:22:10,772 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:10,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:10,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:22:10,783 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:22:10,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:22:10,789 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:22:10,795 [ scc.git] DEBUG Already up to date. 2024-09-20 16:22:10,796 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-20 16:22:11,578 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:11,578 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-20 16:22:11,583 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-20 16:22:11,924 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:11,925 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-20 16:22:11,930 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-20 16:22:12,376 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:12,376 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-20 16:22:12,381 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-20 16:22:12,667 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:12,667 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-20 16:22:12,673 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-20 16:22:13,509 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:13,509 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-20 16:22:13,515 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-20 16:22:13,805 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:13,805 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-20 16:22:13,810 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-20 16:22:14,121 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:14,121 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-20 16:22:14,126 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-09-20 16:22:14,407 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-20 16:22:14,408 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-09-20 16:22:14,412 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:22:14,412 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:14,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:14,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-20 16:22:14,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:14,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-20 16:22:14,632 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-20 16:22:14,632 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-20 16:22:14,632 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-20 16:22:14,633 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-20 16:22:14,633 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-20 16:22:14,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:14,639 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-09-20 16:22:14,639 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-09-20 16:22:14,640 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-20 16:22:14,640 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-20 16:22:14,640 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-20 16:22:14,640 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-09-20 16:22:14,640 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-20 16:22:14,640 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-09-20 16:22:14,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:14,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-20 16:22:14,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:14,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-20 16:22:14,835 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:14,839 [ scc.git] DEBUG setup.py | 2 +- 2024-09-20 16:22:14,839 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-20 16:22:15,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:15,197 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-20 16:22:15,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:15,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-20 16:22:15,463 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-20 16:22:15,464 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-20 16:22:15,464 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-20 16:22:15,464 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-20 16:22:15,464 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-20 16:22:15,464 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-20 16:22:15,464 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:22:15,465 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:22:15,472 [ scc.git] DEBUG Calling 'git reset --hard c8148dc6f55ef426a761e92b13cdbf471bae6f17' 2024-09-20 16:22:15,484 [ scc.git] DEBUG HEAD is now at c8148dc6 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-20 16:22:15,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:15,647 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-20 16:22:15,655 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-20 16:22:15,661 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-20 16:22:15,666 [ scc.config] DEBUG Found github.token 2024-09-20 16:22:15,666 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-20 16:22:16,524 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-20 16:22:16,525 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-20 16:22:16,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:16,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-20 16:22:16,626 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-20 16:22:16,627 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-20 16:22:16,627 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-20 16:22:16,627 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:16,634 [ scc.git] DEBUG .gitignore | 2 + 2024-09-20 16:22:16,634 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-20 16:22:16,634 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-20 16:22:16,634 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-20 16:22:16,635 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-20 16:22:16,635 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-20 16:22:16,635 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-20 16:22:16,635 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-20 16:22:16,635 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-20 16:22:16,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:16,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-20 16:22:16,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:16,929 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-20 16:22:17,055 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-20 16:22:17,055 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:17,060 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-20 16:22:17,060 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-20 16:22:17,060 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-20 16:22:17,060 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-20 16:22:17,060 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-20 16:22:17,060 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-20 16:22:17,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:17,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-20 16:22:17,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:17,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-20 16:22:17,338 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:17,343 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-20 16:22:17,343 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-20 16:22:17,343 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-20 16:22:17,343 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-20 16:22:17,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:17,684 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-20 16:22:17,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:17,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-20 16:22:17,724 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:17,728 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-20 16:22:17,728 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-20 16:22:18,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:18,078 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-20 16:22:18,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:18,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Bump vite from 3.2.10 to 3.2.11) a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-20 16:22:18,116 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:18,119 [ scc.git] DEBUG package-lock.json | 14 ++++++++++---- 2024-09-20 16:22:18,119 [ scc.git] DEBUG package.json | 2 +- 2024-09-20 16:22:18,119 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 5 deletions(-) 2024-09-20 16:22:18,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:18,496 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:22:18,533 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:18,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:18,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:22:18,574 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:22:18,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9a5eb880> has no local changes 2024-09-20 16:22:18,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:22:18,593 [ scc.git] DEBUG [detached HEAD f32b977f] merge master -Dorg -Ssuccess-only 2024-09-20 16:22:18,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:22:18,593 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:22:18,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-20 16:22:19,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-20 16:22:19,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-20 16:22:20,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-20 16:22:20,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:21,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-20 16:22:21,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:21,838 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-20 16:22:21,838 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:22:21,838 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-20 16:22:21,838 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:21,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:21,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:22:21,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:22:21,850 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:22:21,855 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:22:21,861 [ scc.git] DEBUG Already up to date. 2024-09-20 16:22:21,861 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-20 16:22:22,194 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-20 16:22:22,194 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-20 16:22:22,199 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:22:22,199 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:22,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:22,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-20 16:22:22,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:22,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-20 16:22:22,233 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-20 16:22:22,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:22,236 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-20 16:22:22,236 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-20 16:22:22,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:22,380 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:22:22,420 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:22,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:22,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:22:22,464 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:22:22,470 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9a5ac7c0> has no local changes 2024-09-20 16:22:22,470 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:22:22,479 [ scc.git] DEBUG [detached HEAD 559b64e] merge master -Dorg -Ssuccess-only 2024-09-20 16:22:22,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:22:22,480 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:22:22,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-20 16:22:23,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-20 16:22:23,306 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:22:24,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-20 16:22:24,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:24,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:25,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-20 16:22:25,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:25,954 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-20 16:22:25,954 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:22:25,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-20 16:22:25,954 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:25,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:25,960 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:22:25,964 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:22:25,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:22:25,970 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:22:25,976 [ scc.git] DEBUG Already up to date. 2024-09-20 16:22:25,976 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-20 16:22:26,327 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-20 16:22:26,327 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-20 16:22:26,331 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:22:26,331 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:26,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:26,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-20 16:22:26,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:26,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-20 16:22:26,358 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:26,363 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-20 16:22:26,363 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-20 16:22:26,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:26,502 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:22:26,542 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:26,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:26,547 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:22:26,587 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:22:26,595 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9957cf10> has no local changes 2024-09-20 16:22:26,595 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:22:26,604 [ scc.git] DEBUG [detached HEAD d3e67ca] merge master -Dorg -Ssuccess-only 2024-09-20 16:22:26,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:22:26,605 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:22:27,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-20 16:22:27,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-20 16:22:27,606 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:22:28,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-20 16:22:28,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:29,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:29,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-20 16:22:30,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:30,256 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-20 16:22:30,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-20 16:22:31,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-20 16:22:31,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-20 16:22:32,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:32,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:33,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-20 16:22:33,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:33,677 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-20 16:22:34,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-20 16:22:34,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-20 16:22:34,626 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:22:35,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-20 16:22:35,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:36,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:36,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-20 16:22:37,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:37,293 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-20 16:22:37,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-20 16:22:37,743 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:22:38,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-20 16:22:38,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:39,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:39,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-20 16:22:40,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:40,231 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-20 16:22:40,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-20 16:22:41,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-20 16:22:41,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-20 16:22:42,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:42,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:43,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-20 16:22:43,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:43,570 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-20 16:22:44,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-20 16:22:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-20 16:22:45,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-20 16:22:45,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:46,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:46,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-20 16:22:47,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:47,051 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-20 16:22:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-20 16:22:47,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-20 16:22:48,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-20 16:22:48,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:49,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-20 16:22:49,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:49,815 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-20 16:22:49,815 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:22:49,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-20 16:22:49,816 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:49,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:49,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:22:49,833 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:22:49,833 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:22:49,885 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:22:49,934 [ scc.git] DEBUG Already up to date. 2024-09-20 16:22:49,935 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-20 16:22:50,440 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:50,441 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-20 16:22:50,449 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-20 16:22:51,363 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:51,363 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-20 16:22:51,369 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-20 16:22:51,737 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:51,737 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-20 16:22:51,754 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-20 16:22:52,080 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:52,081 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-20 16:22:52,088 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-20 16:22:52,424 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:52,424 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-20 16:22:52,434 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-20 16:22:52,805 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:52,806 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-20 16:22:52,813 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-20 16:22:53,132 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-20 16:22:53,133 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-20 16:22:53,138 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:22:53,138 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:53,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:53,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-20 16:22:53,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:53,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-20 16:22:53,207 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-20 16:22:53,207 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:53,211 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-20 16:22:53,211 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-20 16:22:53,211 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-20 16:22:53,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:53,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-20 16:22:53,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:53,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-20 16:22:53,491 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-20 16:22:53,491 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-20 16:22:53,491 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-20 16:22:53,491 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-20 16:22:53,493 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:53,499 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-20 16:22:53,499 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-20 16:22:53,499 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-20 16:22:53,499 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-20 16:22:53,499 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-20 16:22:53,499 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-20 16:22:53,499 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-20 16:22:53,499 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-20 16:22:53,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:53,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-20 16:22:53,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:53,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-20 16:22:53,842 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-20 16:22:53,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:53,847 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-20 16:22:53,847 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-20 16:22:53,847 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-20 16:22:54,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:54,149 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-20 16:22:54,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:54,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-20 16:22:54,220 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:54,229 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-20 16:22:54,229 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-20 16:22:54,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:54,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-20 16:22:54,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:54,564 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-20 16:22:54,616 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-20 16:22:54,617 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:54,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:54,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-20 16:22:54,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:54,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-20 16:22:55,037 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-20 16:22:55,038 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-20 16:22:55,038 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-20 16:22:55,038 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-20 16:22:55,043 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-20 16:22:55,043 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-20 16:22:55,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:55,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-20 16:22:55,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:55,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-20 16:22:55,415 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-20 16:22:55,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:55,427 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-20 16:22:55,428 [ scc.git] DEBUG package.json | 2 +- 2024-09-20 16:22:55,428 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-20 16:22:55,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:22:55,722 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:22:55,783 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:55,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:55,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:22:55,829 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:22:55,840 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c995868e0> has no local changes 2024-09-20 16:22:55,840 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:22:55,855 [ scc.git] DEBUG [detached HEAD 31d2b38] merge master -Dorg -Ssuccess-only 2024-09-20 16:22:55,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:22:55,856 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:22:56,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-20 16:22:56,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-20 16:22:57,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-20 16:22:57,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-20 16:22:58,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:22:58,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:22:59,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-20 16:22:59,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:22:59,552 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-20 16:22:59,553 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:22:59,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-20 16:22:59,553 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:59,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:59,558 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:22:59,563 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:22:59,564 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:22:59,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:22:59,574 [ scc.git] DEBUG Already up to date. 2024-09-20 16:22:59,574 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-20 16:22:59,882 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-20 16:22:59,882 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-20 16:22:59,887 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:22:59,887 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:22:59,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:59,893 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-20 16:22:59,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:22:59,904 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-20 16:22:59,916 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:22:59,919 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-20 16:22:59,919 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-20 16:22:59,921 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-20 16:22:59,922 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-20 16:22:59,922 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-20 16:22:59,922 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-20 16:23:00,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:00,054 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:00,095 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:00,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:00,101 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:00,139 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:00,149 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c99586b20> has no local changes 2024-09-20 16:23:00,149 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:00,158 [ scc.git] DEBUG [detached HEAD d82cd54] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:00,158 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:00,158 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:00,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-20 16:23:01,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-20 16:23:01,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-20 16:23:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-20 16:23:02,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:03,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-20 16:23:03,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:03,429 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-20 16:23:03,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-20 16:23:04,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-20 16:23:04,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-20 16:23:05,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:05,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-20 16:23:06,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:06,191 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-20 16:23:06,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-20 16:23:07,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-20 16:23:07,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-20 16:23:08,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:08,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-20 16:23:08,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:08,965 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-20 16:23:08,965 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:08,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-20 16:23:08,966 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:08,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:08,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:08,976 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:08,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:08,981 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:08,986 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:08,986 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-20 16:23:09,473 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-20 16:23:09,474 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-20 16:23:09,478 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-20 16:23:09,950 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-20 16:23:09,951 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-20 16:23:09,955 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-20 16:23:10,293 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-20 16:23:10,294 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-20 16:23:10,298 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:10,299 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:10,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:10,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-20 16:23:10,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:10,322 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-20 16:23:10,382 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-20 16:23:10,382 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-20 16:23:10,382 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-20 16:23:10,382 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-20 16:23:10,382 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:23:10,383 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:23:10,389 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-20 16:23:10,396 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-20 16:23:10,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:10,529 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-20 16:23:10,538 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-20 16:23:10,544 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-20 16:23:10,550 [ scc.config] DEBUG Found github.token 2024-09-20 16:23:10,550 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-20 16:23:10,550 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-20 16:23:10,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:10,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-20 16:23:10,580 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-20 16:23:10,580 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-20 16:23:10,580 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-20 16:23:10,580 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:23:10,581 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:23:10,587 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-20 16:23:10,595 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-20 16:23:10,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:10,927 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-20 16:23:10,934 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-20 16:23:10,939 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-20 16:23:10,944 [ scc.config] DEBUG Found github.token 2024-09-20 16:23:10,944 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-20 16:23:10,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-20 16:23:10,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:10,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-20 16:23:10,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:10,969 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-20 16:23:10,969 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-20 16:23:11,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:11,308 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:11,348 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:11,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:11,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:11,391 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:11,398 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c99570f40> has no local changes 2024-09-20 16:23:11,398 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:11,407 [ scc.git] DEBUG [detached HEAD a0b4184] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:11,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:11,407 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:11,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-20 16:23:12,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-20 16:23:12,323 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:23:12,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-20 16:23:13,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:13,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:23:14,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-20 16:23:14,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:14,869 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-20 16:23:15,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-20 16:23:15,325 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:23:15,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-20 16:23:16,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:16,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:23:17,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-20 16:23:17,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:17,809 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-20 16:23:18,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-20 16:23:18,268 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-20 16:23:18,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-20 16:23:19,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:19,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:23:20,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-20 16:23:20,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:20,764 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-20 16:23:21,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-20 16:23:21,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-20 16:23:22,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-20 16:23:22,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-20 16:23:23,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-20 16:23:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-20 16:23:23,612 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:23,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-20 16:23:23,613 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:23,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:23,618 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:23,623 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:23,624 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:23,629 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:23,635 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:23,635 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-20 16:23:23,960 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-20 16:23:23,960 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-20 16:23:23,965 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-20 16:23:24,321 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-20 16:23:24,321 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-20 16:23:24,326 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-20 16:23:24,606 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-20 16:23:24,606 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-20 16:23:24,610 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:24,610 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:24,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:24,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-20 16:23:24,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:24,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-20 16:23:24,641 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:24,644 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-20 16:23:24,644 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-20 16:23:24,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:24,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-20 16:23:24,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:24,812 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-20 16:23:24,855 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-20 16:23:24,855 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:24,858 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-20 16:23:24,858 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-20 16:23:25,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:25,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-20 16:23:25,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:25,204 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-20 16:23:25,216 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-20 16:23:25,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:25,220 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-20 16:23:25,220 [ scc.git] DEBUG package.json | 2 +- 2024-09-20 16:23:25,220 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-20 16:23:25,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:25,590 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:25,632 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:25,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:25,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:25,679 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:25,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9957c400> has no local changes 2024-09-20 16:23:25,688 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:25,698 [ scc.git] DEBUG [detached HEAD 3eab286] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:25,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:25,699 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:26,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-20 16:23:26,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-20 16:23:27,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-20 16:23:27,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:28,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-20 16:23:28,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:28,459 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-20 16:23:28,459 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:28,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-20 16:23:28,459 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:28,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:28,467 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:28,472 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:28,472 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:28,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:28,484 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:28,485 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-20 16:23:28,812 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-20 16:23:28,812 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-20 16:23:28,816 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:28,817 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:28,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:28,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-20 16:23:28,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:28,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-20 16:23:28,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:28,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:28,982 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:29,030 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:29,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:29,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:29,079 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:29,086 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c98543b20> has no local changes 2024-09-20 16:23:29,087 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:29,098 [ scc.git] DEBUG [detached HEAD a20ac4d] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:29,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:29,099 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:29,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-20 16:23:29,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-20 16:23:30,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-20 16:23:30,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-20 16:23:31,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-20 16:23:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:32,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-20 16:23:32,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:32,805 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-20 16:23:32,805 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:32,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-20 16:23:32,806 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:32,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:32,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:32,817 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:32,817 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:32,825 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:32,830 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:32,831 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-20 16:23:33,201 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-20 16:23:33,201 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-20 16:23:33,206 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:33,206 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:33,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:33,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-20 16:23:33,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:33,226 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-20 16:23:33,238 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-20 16:23:33,239 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:33,241 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-20 16:23:33,241 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-20 16:23:33,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:33,390 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:33,431 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:33,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:33,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:33,477 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:33,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9957aee0> has no local changes 2024-09-20 16:23:33,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:33,493 [ scc.git] DEBUG [detached HEAD 547912a] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:33,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:33,493 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:33,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-20 16:23:34,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-20 16:23:34,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-20 16:23:35,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-20 16:23:35,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:36,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-20 16:23:36,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:36,768 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-20 16:23:36,769 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:36,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-20 16:23:36,769 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:36,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:36,775 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:36,780 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:36,781 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:36,786 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:36,792 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:36,793 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-20 16:23:37,173 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-20 16:23:37,173 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-20 16:23:37,178 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:37,178 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:37,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:37,184 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-20 16:23:37,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:37,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-20 16:23:37,240 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG Auto-merging setup.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-20 16:23:37,241 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:23:37,241 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:23:37,250 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-20 16:23:37,258 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-20 16:23:37,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:37,390 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-20 16:23:37,396 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-20 16:23:37,402 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2024-09-20 16:23:37,407 [ scc.config] DEBUG Found github.token 2024-09-20 16:23:37,407 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-20 16:23:37,407 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:37,445 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:37,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:37,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:37,488 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:37,494 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c98518be0> has no local changes 2024-09-20 16:23:37,494 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:37,503 [ scc.git] DEBUG [detached HEAD e779846] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:37,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:37,503 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:37,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-20 16:23:38,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-20 16:23:38,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-20 16:23:39,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-20 16:23:39,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:40,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-20 16:23:40,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:40,623 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-20 16:23:40,623 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:40,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-20 16:23:40,623 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:40,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:40,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:40,633 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:40,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:40,639 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:40,644 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:40,645 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-20 16:23:41,065 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-20 16:23:41,065 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-20 16:23:41,070 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:41,070 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:41,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,077 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-20 16:23:41,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-20 16:23:41,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:23:41,106 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-20 16:23:41,107 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-20 16:23:41,109 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-20 16:23:41,110 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-20 16:23:41,110 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-20 16:23:41,110 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-20 16:23:41,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:41,245 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:41,285 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:41,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:41,329 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:41,337 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984fb640> has no local changes 2024-09-20 16:23:41,337 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:41,346 [ scc.git] DEBUG [detached HEAD 77b2fc1] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:41,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:41,347 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:41,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-20 16:23:41,652 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:41,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-20 16:23:41,652 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:41,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:41,663 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:41,663 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:41,668 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:41,674 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:41,674 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:41,674 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:41,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,679 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:41,718 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:41,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:41,724 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:41,763 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:41,770 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984ff520> has no local changes 2024-09-20 16:23:41,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:41,781 [ scc.git] DEBUG [detached HEAD 320112a] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:41,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:41,782 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:42,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-20 16:23:42,068 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:42,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-20 16:23:42,068 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:42,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:42,074 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:42,080 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:42,080 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:42,088 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:42,095 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:42,095 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:42,095 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:42,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:42,100 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:42,138 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:42,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:42,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:42,182 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:42,189 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c98543d60> has no local changes 2024-09-20 16:23:42,190 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:42,199 [ scc.git] DEBUG [detached HEAD b891f6c] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:42,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:42,200 [ scc.git] INFO Overriding base-branch from master to main 2024-09-20 16:23:42,200 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:42,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-20 16:23:43,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-20 16:23:43,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-20 16:23:43,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-20 16:23:44,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-20 16:23:44,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:45,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-20 16:23:45,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:45,729 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-20 16:23:45,729 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:45,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-20 16:23:45,730 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:45,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:45,735 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-20 16:23:45,740 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:45,741 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-20 16:23:45,746 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-20 16:23:45,752 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:45,752 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-20 16:23:46,184 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-20 16:23:46,184 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-20 16:23:46,189 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:46,190 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:46,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-20 16:23:46,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-20 16:23:46,230 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-20 16:23:46,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-20 16:23:46,230 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:23:46,231 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:23:46,236 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-20 16:23:46,243 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-20 16:23:46,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:46,378 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-20 16:23:46,385 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-20 16:23:46,391 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-20 16:23:46,396 [ scc.config] DEBUG Found github.token 2024-09-20 16:23:46,396 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-20 16:23:46,396 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:46,435 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:46,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,440 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:46,479 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:46,486 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984ad760> has no local changes 2024-09-20 16:23:46,486 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:46,495 [ scc.git] DEBUG [detached HEAD 1b4487f] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:46,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:46,496 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:46,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-20 16:23:46,806 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:46,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-20 16:23:46,806 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:46,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:46,816 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:46,817 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:46,822 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:46,828 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:46,828 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:46,828 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:46,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,834 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:46,874 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:46,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:46,880 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:46,919 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:46,926 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984fed60> has no local changes 2024-09-20 16:23:46,926 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:46,935 [ scc.git] DEBUG [detached HEAD 9ec5390] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:46,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:46,935 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:47,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-20 16:23:47,215 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:47,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-20 16:23:47,215 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:47,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:47,221 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:47,226 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:47,226 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:47,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:47,238 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:47,239 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:47,239 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:47,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:47,244 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:47,286 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:47,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:47,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:47,336 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:47,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984c3ee0> has no local changes 2024-09-20 16:23:47,344 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:47,353 [ scc.git] DEBUG [detached HEAD 1616ea1] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:47,354 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:47,354 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:47,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-20 16:23:48,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-20 16:23:48,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-20 16:23:49,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-20 16:23:49,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:50,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-20 16:23:50,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:50,461 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-20 16:23:50,462 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:23:50,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-20 16:23:50,462 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:50,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:50,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-20 16:23:50,474 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:23:50,474 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-20 16:23:50,479 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-20 16:23:50,485 [ scc.git] DEBUG Already up to date. 2024-09-20 16:23:50,485 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-20 16:23:50,855 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-20 16:23:50,856 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-20 16:23:50,860 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:23:50,860 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:50,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:50,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-20 16:23:50,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:50,877 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-20 16:23:50,912 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-20 16:23:50,912 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-20 16:23:50,912 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:23:50,912 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:23:50,918 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-20 16:23:50,925 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-20 16:23:51,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:23:51,056 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-20 16:23:51,062 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-20 16:23:51,067 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-20 16:23:51,071 [ scc.config] DEBUG Found github.token 2024-09-20 16:23:51,072 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-20 16:23:51,072 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:23:51,108 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:23:51,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:23:51,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:23:51,150 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:23:51,157 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984c89a0> has no local changes 2024-09-20 16:23:51,157 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:23:51,165 [ scc.git] DEBUG [detached HEAD 517a3a6] merge master -Dorg -Ssuccess-only 2024-09-20 16:23:51,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:23:51,165 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-20 16:23:51,165 [ scc.repo] DEBUG ## PRs found: 2024-09-20 16:23:51,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-20 16:23:52,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-20 16:23:52,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-20 16:23:52,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:53,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-20 16:23:53,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-20 16:23:54,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:54,274 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-20 16:23:54,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-20 16:23:55,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-20 16:23:55,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-20 16:23:56,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-20 16:23:56,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-20 16:23:57,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-20 16:23:57,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-20 16:23:58,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-20 16:23:58,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-20 16:23:58,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-20 16:23:58,958 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-20 16:23:59,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-20 16:23:59,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-20 16:24:00,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-20 16:24:00,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-20 16:24:00,883 [ scc.repo] DEBUG ## Branches found: 2024-09-20 16:24:00,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-20 16:24:00,883 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:24:00,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:24:00,922 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-20 16:24:00,929 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-20 16:24:00,929 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-20 16:24:00,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-20 16:24:00,941 [ scc.git] DEBUG Already up to date. 2024-09-20 16:24:00,942 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-20 16:24:01,366 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-20 16:24:01,366 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-20 16:24:01,371 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-20 16:24:01,737 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-20 16:24:01,737 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-20 16:24:01,742 [ scc.git] DEBUG ## Unique users: [] 2024-09-20 16:24:01,742 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:24:01,742 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:24:01,748 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-20 16:24:01,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:24:01,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-20 16:24:01,794 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-20 16:24:01,794 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-20 16:24:01,795 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-20 16:24:01,795 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-20 16:24:01,804 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-20 16:24:01,811 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-20 16:24:01,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:01,954 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-20 16:24:01,962 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-20 16:24:01,968 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#190](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-20 16:24:01,973 [ scc.config] DEBUG Found github.token 2024-09-20 16:24:01,973 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-20 16:24:01,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-20 16:24:01,981 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:24:01,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-20 16:24:01,998 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-20 16:24:02,001 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-20 16:24:02,001 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-20 16:24:02,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:02,341 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-20 16:24:02,384 [ scc.git] DEBUG Get sha1 of %s 2024-09-20 16:24:02,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-20 16:24:02,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:24:02,433 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:24:02,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c984875b0> has no local changes 2024-09-20 16:24:02,441 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:24:02,451 [ scc.git] DEBUG [detached HEAD 76fbce4] merge master -Dorg -Ssuccess-only 2024-09-20 16:24:02,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:02,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-20 16:24:02,529 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-20 16:24:02,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:02,738 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-20 16:24:02,743 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-20 16:24:03,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:03,136 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-20 16:24:03,141 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-20 16:24:03,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:03,525 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-20 16:24:03,530 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-20 16:24:03,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:03,914 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-20 16:24:04,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:04,303 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-20 16:24:04,307 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-20 16:24:04,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:04,720 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-20 16:24:04,725 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-20 16:24:05,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:05,105 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-20 16:24:05,111 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-20 16:24:05,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:05,491 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-20 16:24:05,498 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-20 16:24:05,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:05,883 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-20 16:24:05,888 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-20 16:24:06,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:06,318 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-20 16:24:06,322 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-20 16:24:06,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:06,724 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-20 16:24:06,729 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-20 16:24:07,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:07,106 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-20 16:24:07,111 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-20 16:24:07,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:07,517 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-20 16:24:07,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:07,898 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-20 16:24:08,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:08,285 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-20 16:24:08,290 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-20 16:24:08,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:08,684 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-20 16:24:09,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:09,079 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-20 16:24:09,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:09,482 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-20 16:24:09,489 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-20 16:24:09,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:09,879 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-20 16:24:09,885 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-20 16:24:10,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:10,284 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-20 16:24:10,289 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-20 16:24:10,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:10,671 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-20 16:24:10,676 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-20 16:24:11,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-20 16:24:11,075 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-20 16:24:11,075 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-20 16:24:11,173 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6c9b8e7b80> has local changes 2024-09-20 16:24:11,173 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#190 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/190/)' 2024-09-20 16:24:11,189 [ scc.git] DEBUG [detached HEAD 74df449] merge master -Dorg -Ssuccess-only 2024-09-20 16:24:11,189 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-20 16:24:11,189 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-20 16:24:11,189 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,189 [ scc.merge] INFO 2024-09-20 16:24:11,189 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,189 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-20 16:24:11,189 [ scc.merge] INFO 2024-09-20 16:24:11,189 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-20 16:24:11,189 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-20 16:24:11,190 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-20 16:24:11,190 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-20 16:24:11,190 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-20 16:24:11,190 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-20 16:24:11,190 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-20 16:24:11,190 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-20 16:24:11,190 [ scc.merge] INFO 2024-09-20 16:24:11,190 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-20 16:24:11,190 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,190 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-20 16:24:11,191 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-20 16:24:11,191 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-20 16:24:11,191 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-20 16:24:11,191 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-20 16:24:11,191 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,191 [ scc.merge] INFO 2024-09-20 16:24:11,191 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-20 16:24:11,191 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-20 16:24:11,192 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-20 16:24:11,192 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-20 16:24:11,192 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-20 16:24:11,192 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-20 16:24:11,192 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-20 16:24:11,192 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-20 16:24:11,192 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,192 [ scc.merge] INFO 2024-09-20 16:24:11,192 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-20 16:24:11,193 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-20 16:24:11,193 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,193 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,193 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-20 16:24:11,193 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,193 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-20 16:24:11,194 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-20 16:24:11,194 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Repository: ome/scripts 2024-09-20 16:24:11,194 [ scc.merge] INFO Excluded PRs: 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-20 16:24:11,194 [ scc.merge] INFO Already up to date. 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Merged PRs: 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-20 16:24:11,194 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-20 16:24:11,194 [ scc.merge] INFO 2024-09-20 16:24:11,194 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-20 16:24:11,194 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-20 16:24:11,203 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-20 16:24:11,208 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-20 16:24:11,213 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-20 16:24:11,219 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-20 16:24:11,223 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,228 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-20 16:24:11,228 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-20 16:24:11,234 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-20 16:24:11,240 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,245 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-20 16:24:11,245 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-20 16:24:11,251 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-20 16:24:11,256 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-20 16:24:11,262 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-20 16:24:11,268 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-20 16:24:11,275 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-20 16:24:11,282 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-20 16:24:11,287 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-20 16:24:11,292 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-20 16:24:11,298 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-20 16:24:11,303 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-20 16:24:11,309 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-20 16:24:11,315 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-20 16:24:11,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-20 16:24:11,320 [ scc.git] DEBUG Calling 'git remote' 2024-09-20 16:24:11,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f0da3d6] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 0288b40] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-20 16:24:57,245 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-20 16:25:06,237 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-20 16:25:08,524 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-20 16:25:13,053 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-20 16:25:54,514 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS