![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 221 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 190 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-23 01:05:37,140 [ scc.config] DEBUG Found github.token 2024-09-23 01:05:37,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-23 01:05:37,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:05:37,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:05:38,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-23 01:05:38,133 [ scc.gh] DEBUG 3338 remaining from 5000 (Reset at 01:09 2024-09-23 01:05:38,134 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:05:38,138 [ scc.git] DEBUG Check current status 2024-09-23 01:05:38,138 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:38,142 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-23 01:05:38,142 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:38,185 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-23 01:05:38,187 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-23 01:05:38,190 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-23 01:05:38,208 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-23 01:05:38,213 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-23 01:05:38,215 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-23 01:05:38,218 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-23 01:05:38,235 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-23 01:05:38,238 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-23 01:05:38,241 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-23 01:05:38,244 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-23 01:05:38,247 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-23 01:05:38,250 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-23 01:05:38,253 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-23 01:05:38,259 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-23 01:05:38,262 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-23 01:05:38,265 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-23 01:05:38,267 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-23 01:05:38,270 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-23 01:05:38,272 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-23 01:05:38,275 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-23 01:05:38,278 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-23 01:05:38,282 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:05:38,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-23 01:05:39,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:05:39,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:05:39,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:05:40,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:05:40,269 [ scc.git] DEBUG Resetting... 2024-09-23 01:05:40,269 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-23 01:05:40,277 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-23 01:05:40,278 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-23 01:05:40,369 [ scc.git] DEBUG Check current status 2024-09-23 01:05:40,369 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:40,373 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-23 01:05:40,373 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:40,416 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-23 01:05:40,419 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-23 01:05:40,422 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-23 01:05:40,424 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-23 01:05:40,428 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-23 01:05:40,431 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-23 01:05:40,433 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-23 01:05:40,436 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-23 01:05:40,439 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-23 01:05:40,442 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-23 01:05:40,444 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-23 01:05:40,447 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-23 01:05:40,449 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-23 01:05:40,452 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-23 01:05:40,455 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-23 01:05:40,458 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-23 01:05:40,460 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-23 01:05:40,462 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-23 01:05:40,465 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-23 01:05:40,467 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-23 01:05:40,470 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-23 01:05:40,473 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-23 01:05:40,474 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-23 01:05:40,474 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-23 01:05:40,475 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-23 01:05:40,475 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-23 01:05:40,475 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-23 01:05:40,475 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:05:40,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-23 01:05:41,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-23 01:05:41,205 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:05:41,205 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-23 01:05:41,205 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:05:41,205 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:05:41,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:05:41,210 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:05:41,213 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:05:41,214 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:05:41,218 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:05:41,222 [ scc.git] DEBUG Already up to date. 2024-09-23 01:05:41,222 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-23 01:05:41,515 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-23 01:05:41,515 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-23 01:05:41,520 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:05:41,520 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:05:41,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:05:41,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-23 01:05:41,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:05:41,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-23 01:05:41,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:05:41,562 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-23 01:05:41,562 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-23 01:05:41,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:05:41,692 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:05:41,769 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-23 01:05:41,770 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:05:41,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:05:41,773 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:05:41,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd4c81e7b80> has no local changes 2024-09-23 01:05:41,943 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:05:42,012 [ scc.git] DEBUG [detached HEAD 67d089c] merge master -Dorg -Snone 2024-09-23 01:05:42,013 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-23 01:05:42,013 [ scc.merge] INFO Already up to date. 2024-09-23 01:05:42,013 [ scc.merge] INFO 2024-09-23 01:05:42,013 [ scc.merge] INFO Merged PRs: 2024-09-23 01:05:42,013 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-23 01:05:42,013 [ scc.merge] INFO 2024-09-23 01:05:42,013 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-23 01:05:42,013 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-23 01:05:49,707 [ scc.config] DEBUG Found github.token 2024-09-23 01:05:49,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-23 01:05:49,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:05:50,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:05:50,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-23 01:05:50,664 [ scc.gh] DEBUG 3328 remaining from 5000 (Reset at 01:09 2024-09-23 01:05:50,665 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:05:50,669 [ scc.git] DEBUG Check current status 2024-09-23 01:05:50,669 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:50,673 [ scc.git] DEBUG 67d089c merge master -Dorg -Snone 2024-09-23 01:05:50,674 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:50,722 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-23 01:05:50,724 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-23 01:05:50,727 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-23 01:05:50,730 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-23 01:05:52,178 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-23 01:05:52,181 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-23 01:05:52,184 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-23 01:05:52,187 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-23 01:05:52,190 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-23 01:05:52,192 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-23 01:05:52,195 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-23 01:05:52,197 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-23 01:05:52,200 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-23 01:05:52,203 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-23 01:05:52,206 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-23 01:05:52,209 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-23 01:05:52,211 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-23 01:05:52,213 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-23 01:05:52,216 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-23 01:05:52,218 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-23 01:05:52,221 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-23 01:05:52,224 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-23 01:05:52,230 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:05:52,230 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-23 01:05:52,232 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-23 01:05:52,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-23 01:05:52,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:05:53,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:05:53,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:05:54,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:05:54,067 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:05:54,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-23 01:05:54,136 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:05:54,139 [ scc.git] DEBUG Check current status 2024-09-23 01:05:54,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:54,143 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-23 01:05:54,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:54,183 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:05:54,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-23 01:05:55,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:05:55,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:05:55,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:05:56,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:05:56,232 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:05:56,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:05:56,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-23 01:05:56,268 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:05:56,272 [ scc.git] DEBUG Check current status 2024-09-23 01:05:56,272 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:56,276 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-23 01:05:56,276 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:56,315 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:05:56,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-23 01:05:57,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:05:57,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:05:58,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:05:58,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:05:58,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:05:58,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:05:58,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-23 01:05:58,453 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:05:58,457 [ scc.git] DEBUG Check current status 2024-09-23 01:05:58,457 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:05:58,460 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-23 01:05:58,461 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:05:58,500 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:05:58,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-23 01:05:59,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:05:59,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:00,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:00,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:00,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:00,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:00,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-23 01:06:00,729 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:00,734 [ scc.git] DEBUG Check current status 2024-09-23 01:06:00,734 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:00,738 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-23 01:06:00,738 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:00,780 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:01,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-23 01:06:01,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:02,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:02,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:02,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:02,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:02,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:02,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-23 01:06:02,877 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:02,881 [ scc.git] DEBUG Check current status 2024-09-23 01:06:02,881 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:02,908 [ scc.git] DEBUG f9a321dd Merge pull request #549 from will-moore/inset_feature 2024-09-23 01:06:02,908 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:02,950 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:03,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-23 01:06:03,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:04,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:04,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:04,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:04,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:05,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:05,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-23 01:06:05,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:05,040 [ scc.git] DEBUG Check current status 2024-09-23 01:06:05,040 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:05,043 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-23 01:06:05,044 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:05,085 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:05,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-23 01:06:05,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:06,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:06,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:07,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:07,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:07,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:07,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-23 01:06:07,233 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:07,238 [ scc.git] DEBUG Check current status 2024-09-23 01:06:07,238 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:07,242 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-23 01:06:07,243 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:07,284 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:07,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-23 01:06:08,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:08,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:08,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:09,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:09,290 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:09,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:09,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-23 01:06:09,329 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:09,333 [ scc.git] DEBUG Check current status 2024-09-23 01:06:09,333 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:09,336 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-23 01:06:09,337 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:09,375 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:09,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-23 01:06:10,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:10,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:11,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:11,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:11,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:11,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:11,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-23 01:06:11,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:11,482 [ scc.git] DEBUG Check current status 2024-09-23 01:06:11,482 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:11,486 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-23 01:06:11,486 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:11,527 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:11,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-23 01:06:12,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:12,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:13,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:13,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:13,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:13,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:13,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-23 01:06:13,590 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:13,594 [ scc.git] DEBUG Check current status 2024-09-23 01:06:13,594 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:13,598 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-23 01:06:13,598 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:13,638 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:14,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-23 01:06:14,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:14,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:15,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:15,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:15,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:15,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:15,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-23 01:06:15,824 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:15,828 [ scc.git] DEBUG Check current status 2024-09-23 01:06:15,828 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:15,832 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-23 01:06:15,832 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:15,872 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:16,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-23 01:06:16,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:17,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:17,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:17,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:17,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:18,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:18,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-23 01:06:18,010 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:18,014 [ scc.git] DEBUG Check current status 2024-09-23 01:06:18,015 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:18,019 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-23 01:06:18,019 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:18,059 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:18,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-23 01:06:18,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:19,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:19,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:20,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:20,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:20,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:20,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-23 01:06:20,157 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:20,162 [ scc.git] DEBUG Check current status 2024-09-23 01:06:20,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:20,166 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-23 01:06:20,166 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:20,208 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:20,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-23 01:06:21,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:21,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:21,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:22,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:22,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:22,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:22,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-23 01:06:22,396 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:22,400 [ scc.git] DEBUG Check current status 2024-09-23 01:06:22,401 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:22,404 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-23 01:06:22,405 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:22,444 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:22,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-23 01:06:23,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:23,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:24,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:24,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:24,545 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:24,586 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:24,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-23 01:06:24,587 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:24,592 [ scc.git] DEBUG Check current status 2024-09-23 01:06:24,592 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:24,597 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-23 01:06:24,597 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:24,638 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:24,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-23 01:06:24,941 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-23 01:06:25,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-23 01:06:25,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:26,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:26,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:26,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:26,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:26,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:26,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-23 01:06:26,915 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:26,921 [ scc.git] DEBUG Check current status 2024-09-23 01:06:26,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:26,926 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-23 01:06:26,926 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:26,972 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:27,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-23 01:06:27,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:28,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:28,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:28,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:28,991 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:29,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:29,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-23 01:06:29,032 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:29,037 [ scc.git] DEBUG Check current status 2024-09-23 01:06:29,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:29,042 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-23 01:06:29,042 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:29,085 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:29,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-23 01:06:29,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:30,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:30,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:31,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:31,170 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:31,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:31,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-23 01:06:31,209 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:31,215 [ scc.git] DEBUG Check current status 2024-09-23 01:06:31,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:31,220 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-23 01:06:31,220 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:31,269 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:31,271 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-23 01:06:31,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-23 01:06:32,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:32,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:32,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:33,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:33,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:33,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:33,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-23 01:06:33,409 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:33,418 [ scc.git] DEBUG Check current status 2024-09-23 01:06:33,418 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:33,426 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-23 01:06:33,426 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:33,475 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:33,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-23 01:06:33,802 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-23 01:06:34,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-23 01:06:34,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:34,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:35,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:35,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:35,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:35,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:35,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-23 01:06:35,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:35,783 [ scc.git] DEBUG Check current status 2024-09-23 01:06:35,783 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:35,788 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-23 01:06:35,788 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:35,833 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:36,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-23 01:06:36,138 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-23 01:06:36,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-23 01:06:36,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:37,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:37,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:38,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:38,072 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:38,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:38,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-23 01:06:38,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:38,121 [ scc.git] DEBUG Check current status 2024-09-23 01:06:38,121 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:38,127 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-23 01:06:38,127 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:38,173 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:38,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-23 01:06:38,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:39,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:39,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:40,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:40,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:40,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:40,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-23 01:06:40,240 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-23 01:06:40,246 [ scc.git] DEBUG Check current status 2024-09-23 01:06:40,247 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:40,267 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-23 01:06:40,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:40,314 [ scc.config] DEBUG Found remote.origin.url 2024-09-23 01:06:40,315 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-23 01:06:40,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-23 01:06:40,593 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-23 01:06:40,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-23 01:06:41,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-23 01:06:41,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-23 01:06:42,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-23 01:06:42,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-23 01:06:42,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:42,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:42,565 [ scc.git] DEBUG Resetting... 2024-09-23 01:06:42,565 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-23 01:06:42,576 [ scc.git] DEBUG HEAD is now at 67d089c merge master -Dorg -Snone 2024-09-23 01:06:42,576 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-23 01:06:42,680 [ scc.git] DEBUG Check current status 2024-09-23 01:06:42,680 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-23 01:06:42,687 [ scc.git] DEBUG 67d089c merge master -Dorg -Snone 2024-09-23 01:06:42,687 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-23 01:06:42,741 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-23 01:06:42,743 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-23 01:06:42,747 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-23 01:06:42,749 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-23 01:06:42,759 [ scc.git] DEBUG f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 omero-figure (v7.1.0-23-gf9a321dd) 2024-09-23 01:06:42,762 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-23 01:06:42,764 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-23 01:06:42,768 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-23 01:06:42,770 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-23 01:06:42,773 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-23 01:06:42,775 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-23 01:06:42,778 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-23 01:06:42,781 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-23 01:06:42,783 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-23 01:06:42,786 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-23 01:06:42,789 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-23 01:06:42,791 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-23 01:06:42,793 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-23 01:06:42,796 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-23 01:06:42,799 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-23 01:06:42,802 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-23 01:06:42,806 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-23 01:06:42,807 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-23 01:06:42,807 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-23 01:06:42,807 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-23 01:06:42,807 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-23 01:06:42,807 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-23 01:06:42,807 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-23 01:06:42,807 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:06:43,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-23 01:06:43,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/390 HTTP/1.1" 200 None 2024-09-23 01:06:43,460 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:06:44,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-23 01:06:44,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:06:44,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518 HTTP/1.1" 200 None 2024-09-23 01:06:45,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89c0a51a26328c852b9c21f4c9bfc62ecb7cd518?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:06:45,304 [ scc.repo] DEBUG - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-23 01:06:45,304 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:06:45,304 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:45,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:45,310 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:06:45,316 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:06:45,316 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:06:45,321 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:06:45,327 [ scc.git] DEBUG Already up to date. 2024-09-23 01:06:45,328 [ scc.git] DEBUG Calling 'git fetch origin pull/390/head' 2024-09-23 01:06:45,645 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-23 01:06:45,645 [ scc.git] DEBUG * branch refs/pull/390/head -> FETCH_HEAD 2024-09-23 01:06:45,650 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:06:45,650 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:45,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:45,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-23 01:06:45,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:45,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 390 (Bump omero-figure from `5f62399` to `f9a321d`) 89c0a51a26328c852b9c21f4c9bfc62ecb7cd518' 2024-09-23 01:06:45,673 [ scc.git] DEBUG Already up to date. 2024-09-23 01:06:45,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:06:45,810 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:06:45,866 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:45,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:45,872 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:06:46,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-23 01:06:46,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-23 01:06:47,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-23 01:06:47,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:06:48,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:06:48,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-23 01:06:48,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:06:48,993 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-23 01:06:48,993 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:06:48,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-23 01:06:48,994 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:48,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:49,000 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:06:49,006 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:06:49,006 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:06:49,012 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:06:49,019 [ scc.git] DEBUG Already up to date. 2024-09-23 01:06:49,019 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-23 01:06:49,372 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-23 01:06:49,372 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-23 01:06:49,377 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:06:49,377 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:49,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:49,383 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-23 01:06:49,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:49,394 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-23 01:06:49,437 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:06:49,441 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-23 01:06:49,441 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-23 01:06:49,441 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-23 01:06:49,441 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-23 01:06:49,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:06:49,576 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:06:49,616 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:49,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:49,622 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:49,662 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:06:49,669 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef2f4be50> has no local changes 2024-09-23 01:06:49,669 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:06:49,678 [ scc.git] DEBUG [detached HEAD 9143e3e] merge master -Dorg -Ssuccess-only 2024-09-23 01:06:49,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:49,678 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:06:50,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-23 01:06:50,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-23 01:06:50,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-23 01:06:51,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-23 01:06:51,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:06:52,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:06:52,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-23 01:06:53,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:06:53,358 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-23 01:06:53,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-23 01:06:54,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-23 01:06:54,289 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:06:54,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-23 01:06:54,289 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:54,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:54,294 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:06:54,299 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:06:54,299 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:06:54,305 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:06:54,311 [ scc.git] DEBUG Already up to date. 2024-09-23 01:06:54,311 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-23 01:06:54,607 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-23 01:06:54,607 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-23 01:06:54,612 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:06:54,613 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:54,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:54,620 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-23 01:06:54,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:54,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-23 01:06:54,654 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:06:54,657 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-23 01:06:54,657 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-23 01:06:54,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:06:54,796 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:06:54,836 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:06:54,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:06:54,842 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:06:54,879 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:06:54,885 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef118ce20> has no local changes 2024-09-23 01:06:54,885 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:06:54,893 [ scc.git] DEBUG [detached HEAD 5671d41] merge master -Dorg -Ssuccess-only 2024-09-23 01:06:54,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:06:54,893 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:06:55,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-23 01:06:55,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-23 01:06:56,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-23 01:06:56,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-23 01:06:57,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-23 01:06:57,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-23 01:06:58,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:06:58,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-23 01:06:58,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:06:58,967 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-23 01:06:59,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-23 01:06:59,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-23 01:07:00,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-23 01:07:00,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-23 01:07:01,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-23 01:07:01,321 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:07:01,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-23 01:07:01,321 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:01,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:01,329 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:07:01,342 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:07:01,342 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:07:01,351 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:07:01,361 [ scc.git] DEBUG Already up to date. 2024-09-23 01:07:01,361 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-23 01:07:01,821 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-23 01:07:01,821 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-23 01:07:01,827 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:07:01,827 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:01,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:01,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-23 01:07:01,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:01,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-23 01:07:01,902 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-23 01:07:01,904 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:01,907 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-23 01:07:01,907 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-23 01:07:02,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:02,060 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:07:02,110 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:02,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:02,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:07:02,169 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:07:02,181 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef11afd00> has no local changes 2024-09-23 01:07:02,182 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:07:02,194 [ scc.git] DEBUG [detached HEAD c0fe709] merge master -Dorg -Ssuccess-only 2024-09-23 01:07:02,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:07:02,195 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:07:02,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-23 01:07:03,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-23 01:07:03,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-23 01:07:03,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-23 01:07:04,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-23 01:07:04,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:05,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:05,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-23 01:07:06,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:06,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-23 01:07:07,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-23 01:07:07,170 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-23 01:07:07,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-23 01:07:08,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-23 01:07:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-23 01:07:09,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-23 01:07:09,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:10,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-23 01:07:10,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:10,437 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-23 01:07:10,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-23 01:07:11,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-23 01:07:11,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-23 01:07:12,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:12,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-23 01:07:13,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:13,211 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-23 01:07:13,211 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:07:13,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-23 01:07:13,212 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:13,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:13,218 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:07:13,222 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:07:13,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:07:13,230 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:07:13,237 [ scc.git] DEBUG Already up to date. 2024-09-23 01:07:13,237 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-23 01:07:13,589 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-23 01:07:13,589 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-23 01:07:13,594 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-23 01:07:13,897 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-23 01:07:13,897 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-23 01:07:13,902 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-23 01:07:14,245 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-23 01:07:14,245 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-23 01:07:14,250 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:07:14,251 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:14,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:14,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-23 01:07:14,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:14,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-23 01:07:14,303 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-23 01:07:14,303 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-23 01:07:14,303 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-23 01:07:14,303 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:07:14,304 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:07:14,311 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-23 01:07:14,319 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-23 01:07:14,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:14,463 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-23 01:07:14,472 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-23 01:07:14,480 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-23 01:07:14,485 [ scc.config] DEBUG Found github.token 2024-09-23 01:07:14,486 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-23 01:07:14,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-23 01:07:14,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:14,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-23 01:07:14,510 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-23 01:07:14,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-23 01:07:14,511 [ scc.git] DEBUG Auto-merging setup.py 2024-09-23 01:07:14,511 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-23 01:07:14,511 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-23 01:07:14,511 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-23 01:07:14,511 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-23 01:07:14,511 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:07:14,511 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:07:14,518 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-23 01:07:14,527 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-23 01:07:14,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:14,859 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-23 01:07:14,866 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-23 01:07:14,874 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-23 01:07:14,880 [ scc.config] DEBUG Found github.token 2024-09-23 01:07:14,880 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-23 01:07:14,880 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-23 01:07:14,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:14,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-23 01:07:14,944 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-23 01:07:14,944 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-23 01:07:14,945 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:14,948 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-23 01:07:14,948 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-23 01:07:14,948 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-23 01:07:14,948 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-23 01:07:14,948 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-23 01:07:14,948 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-23 01:07:15,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:15,282 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:07:15,328 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:15,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:15,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:07:15,380 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:07:15,387 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef11b0eb0> has no local changes 2024-09-23 01:07:15,387 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:07:15,396 [ scc.git] DEBUG [detached HEAD fd7805a] merge master -Dorg -Ssuccess-only 2024-09-23 01:07:15,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:07:15,396 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:07:16,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-23 01:07:16,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-09-23 01:07:16,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/590 HTTP/1.1" 200 None 2024-09-23 01:07:16,914 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:07:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-23 01:07:17,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:18,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:18,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a7d483b1917b72d90c571703f5d4187bcb7711f9 HTTP/1.1" 200 None 2024-09-23 01:07:19,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/a7d483b1917b72d90c571703f5d4187bcb7711f9?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:19,388 [ scc.repo] DEBUG - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-23 01:07:19,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-09-23 01:07:20,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-09-23 01:07:20,293 [ scc.repo] DEBUG # ... Include label: include 2024-09-23 01:07:20,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff HTTP/1.1" 200 None 2024-09-23 01:07:21,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:21,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:22,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/588 HTTP/1.1" 200 None 2024-09-23 01:07:22,160 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:07:22,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd HTTP/1.1" 200 None 2024-09-23 01:07:23,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:23,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9c8bd3449455ae780654d47d06384c7ddd8a34cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:24,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-23 01:07:24,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-23 01:07:25,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:25,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:26,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-23 01:07:26,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:26,498 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-23 01:07:26,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-23 01:07:27,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-23 01:07:27,451 [ scc.repo] DEBUG # ... Include label: include 2024-09-23 01:07:27,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-23 01:07:28,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:28,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:29,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-23 01:07:29,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:29,711 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-23 01:07:30,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-23 01:07:30,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-23 01:07:30,631 [ scc.repo] DEBUG # ... Include label: include 2024-09-23 01:07:31,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-23 01:07:31,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:32,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:32,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-23 01:07:32,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:32,956 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-23 01:07:33,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-23 01:07:33,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-23 01:07:34,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-23 01:07:34,420 [ scc.repo] DEBUG # ... Include label: include 2024-09-23 01:07:34,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-23 01:07:35,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:35,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:36,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-23 01:07:36,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:36,853 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-23 01:07:37,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-23 01:07:37,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-23 01:07:37,807 [ scc.repo] DEBUG # ... Include label: include 2024-09-23 01:07:38,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-23 01:07:38,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:39,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:39,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-23 01:07:40,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:40,168 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-23 01:07:40,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-23 01:07:41,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-23 01:07:41,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-23 01:07:42,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:42,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:42,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-23 01:07:43,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:43,374 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-23 01:07:43,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-23 01:07:44,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-23 01:07:44,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-23 01:07:45,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:45,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:07:46,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-23 01:07:46,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:46,651 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-23 01:07:46,652 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:07:46,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-23 01:07:46,652 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:46,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:46,659 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:07:46,666 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:07:46,667 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:07:46,675 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:07:46,684 [ scc.git] DEBUG Already up to date. 2024-09-23 01:07:46,685 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-23 01:07:47,570 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:47,571 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-23 01:07:47,576 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-23 01:07:47,966 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:47,966 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-23 01:07:47,975 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-23 01:07:48,501 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:48,501 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-23 01:07:48,508 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-23 01:07:48,792 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:48,793 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-23 01:07:48,799 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-23 01:07:50,012 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:50,013 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-23 01:07:50,018 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-23 01:07:50,312 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:50,312 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-23 01:07:50,318 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-23 01:07:50,657 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:50,657 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-23 01:07:50,664 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-09-23 01:07:50,951 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-23 01:07:50,951 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-09-23 01:07:50,956 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:07:50,957 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:50,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:50,964 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-23 01:07:50,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:50,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-23 01:07:51,418 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-23 01:07:51,418 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-23 01:07:51,418 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-23 01:07:51,418 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-23 01:07:51,418 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-23 01:07:51,419 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:51,426 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-23 01:07:51,426 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-23 01:07:51,427 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-09-23 01:07:51,427 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-23 01:07:51,427 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-09-23 01:07:51,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:51,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-23 01:07:51,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:51,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-23 01:07:51,667 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:51,670 [ scc.git] DEBUG setup.py | 2 +- 2024-09-23 01:07:51,670 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-23 01:07:51,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:51,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-23 01:07:51,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:52,000 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-23 01:07:52,313 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-23 01:07:52,313 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-23 01:07:52,313 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-23 01:07:52,313 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-23 01:07:52,313 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-23 01:07:52,313 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-23 01:07:52,313 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:07:52,314 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:07:52,322 [ scc.git] DEBUG Calling 'git reset --hard a8f646be89246f1f6ae2b0e9a75886bc9535d125' 2024-09-23 01:07:52,333 [ scc.git] DEBUG HEAD is now at a8f646be merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-23 01:07:52,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:52,467 [ scc.git] DEBUG Calling 'git merge-base f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-23 01:07:52,476 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53' 2024-09-23 01:07:52,484 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-23 01:07:52,490 [ scc.config] DEBUG Found github.token 2024-09-23 01:07:52,490 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-23 01:07:53,179 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-23 01:07:53,180 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-23 01:07:53,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:53,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-23 01:07:53,693 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-23 01:07:53,694 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-23 01:07:53,694 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-23 01:07:53,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:53,703 [ scc.git] DEBUG .gitignore | 2 + 2024-09-23 01:07:53,703 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-23 01:07:53,703 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-23 01:07:53,703 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-23 01:07:53,703 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-23 01:07:53,704 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-23 01:07:53,704 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-23 01:07:53,704 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-23 01:07:53,704 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-23 01:07:53,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:53,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-23 01:07:53,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:53,864 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-23 01:07:53,886 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-23 01:07:53,887 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:53,891 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-23 01:07:53,892 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-23 01:07:53,892 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-23 01:07:53,892 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-23 01:07:53,892 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-23 01:07:53,892 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-23 01:07:54,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:54,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-23 01:07:54,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:54,248 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-23 01:07:54,283 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:54,288 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-23 01:07:54,288 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-23 01:07:54,288 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-23 01:07:54,288 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-23 01:07:54,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:54,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-23 01:07:54,633 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:54,639 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-23 01:07:54,664 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:54,668 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-23 01:07:54,668 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-23 01:07:55,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:55,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-23 01:07:55,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:55,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Bump vite from 3.2.10 to 3.2.11) a7d483b1917b72d90c571703f5d4187bcb7711f9' 2024-09-23 01:07:55,070 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:07:55,074 [ scc.git] DEBUG package-lock.json | 14 ++++++++++---- 2024-09-23 01:07:55,074 [ scc.git] DEBUG package.json | 2 +- 2024-09-23 01:07:55,074 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 5 deletions(-) 2024-09-23 01:07:55,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:07:55,440 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:07:55,484 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:55,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:55,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:07:55,531 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:07:55,540 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef11b4880> has no local changes 2024-09-23 01:07:55,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:07:55,551 [ scc.git] DEBUG [detached HEAD 217d855c] merge master -Dorg -Ssuccess-only 2024-09-23 01:07:55,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:07:55,552 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:07:56,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-23 01:07:57,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-23 01:07:57,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-23 01:07:58,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-23 01:07:58,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:07:59,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-23 01:07:59,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:07:59,763 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-23 01:07:59,763 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:07:59,763 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-23 01:07:59,763 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:07:59,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:07:59,770 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:07:59,775 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:07:59,776 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:07:59,781 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:07:59,789 [ scc.git] DEBUG Already up to date. 2024-09-23 01:07:59,790 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-23 01:08:00,139 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-23 01:08:00,140 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-23 01:08:00,146 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:08:00,146 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:00,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:00,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-23 01:08:00,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:00,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-23 01:08:00,190 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-23 01:08:00,191 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:00,194 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-23 01:08:00,194 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-23 01:08:00,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:00,348 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:08:00,392 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:00,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:00,398 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:08:00,440 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:08:00,450 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef1178d90> has no local changes 2024-09-23 01:08:00,450 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:08:00,461 [ scc.git] DEBUG [detached HEAD afe5c9b] merge master -Dorg -Ssuccess-only 2024-09-23 01:08:00,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:08:00,462 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:08:00,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-23 01:08:01,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-23 01:08:01,264 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:01,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-23 01:08:02,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:02,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:03,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-23 01:08:03,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:03,715 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-23 01:08:03,715 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:08:03,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-23 01:08:03,715 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:03,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:03,722 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:08:03,729 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:08:03,729 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:08:03,741 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:08:03,751 [ scc.git] DEBUG Already up to date. 2024-09-23 01:08:03,752 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-23 01:08:04,086 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-23 01:08:04,086 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-23 01:08:04,091 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:08:04,091 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:04,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:04,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-23 01:08:04,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:04,111 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-23 01:08:04,124 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:04,130 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-23 01:08:04,130 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-23 01:08:04,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:04,272 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:08:04,319 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:04,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:04,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:08:04,371 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:08:04,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef012ef10> has no local changes 2024-09-23 01:08:04,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:08:04,395 [ scc.git] DEBUG [detached HEAD b10ef66] merge master -Dorg -Ssuccess-only 2024-09-23 01:08:04,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:08:04,396 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:08:04,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-23 01:08:05,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-23 01:08:05,323 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:05,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-23 01:08:06,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:06,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:07,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-23 01:08:07,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:07,684 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-23 01:08:08,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-23 01:08:08,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-23 01:08:09,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-23 01:08:09,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:09,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:10,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-23 01:08:10,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:10,832 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-23 01:08:11,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-23 01:08:11,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-23 01:08:11,737 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:12,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-23 01:08:12,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:13,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:13,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-23 01:08:14,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:14,308 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-23 01:08:14,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-23 01:08:14,780 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:15,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-23 01:08:15,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:16,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:16,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-23 01:08:17,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:17,312 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-23 01:08:17,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-23 01:08:18,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-23 01:08:18,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-23 01:08:19,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:19,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:20,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-23 01:08:20,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:20,542 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-23 01:08:20,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-23 01:08:21,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-23 01:08:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-23 01:08:22,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:22,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:23,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-23 01:08:23,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:23,787 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-23 01:08:24,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-23 01:08:24,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-23 01:08:25,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-23 01:08:25,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:26,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-23 01:08:26,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:26,500 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-23 01:08:26,500 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:08:26,501 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-23 01:08:26,501 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:26,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:26,508 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:08:26,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:08:26,514 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:08:26,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:08:26,562 [ scc.git] DEBUG Already up to date. 2024-09-23 01:08:26,562 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-23 01:08:27,150 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:27,151 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-23 01:08:27,155 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-23 01:08:28,237 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:28,237 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-23 01:08:28,241 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-23 01:08:28,637 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:28,637 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-23 01:08:28,643 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-23 01:08:28,929 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:28,929 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-23 01:08:28,936 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-23 01:08:29,221 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:29,222 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-23 01:08:29,227 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-23 01:08:29,577 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:29,578 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-23 01:08:29,583 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-23 01:08:29,867 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-23 01:08:29,867 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-23 01:08:29,872 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:08:29,872 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:29,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:29,879 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-23 01:08:29,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:29,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-23 01:08:29,989 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-23 01:08:29,990 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:29,994 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-23 01:08:29,994 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-23 01:08:29,994 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-23 01:08:30,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:30,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-23 01:08:30,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:30,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-23 01:08:30,419 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-23 01:08:30,420 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-23 01:08:30,420 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-23 01:08:30,420 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-23 01:08:30,420 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:30,424 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-23 01:08:30,424 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-23 01:08:30,424 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-23 01:08:30,424 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-23 01:08:30,424 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-23 01:08:30,425 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-23 01:08:30,425 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-23 01:08:30,425 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-23 01:08:30,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:30,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-23 01:08:30,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:30,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-23 01:08:30,656 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-23 01:08:30,657 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:30,661 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-23 01:08:30,661 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-23 01:08:30,661 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-23 01:08:31,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:31,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-23 01:08:31,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:31,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-23 01:08:31,075 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:31,085 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-23 01:08:31,085 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-23 01:08:31,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:31,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-23 01:08:31,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:31,421 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-23 01:08:31,468 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-23 01:08:31,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:31,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:31,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-23 01:08:31,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:31,828 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-23 01:08:32,003 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-23 01:08:32,003 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-23 01:08:32,003 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-23 01:08:32,003 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:32,009 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-23 01:08:32,010 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-23 01:08:32,010 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-23 01:08:32,010 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-23 01:08:32,010 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-23 01:08:32,010 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-23 01:08:32,010 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-23 01:08:32,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:32,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-23 01:08:32,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:32,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-23 01:08:32,376 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-23 01:08:32,377 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:32,387 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-23 01:08:32,388 [ scc.git] DEBUG package.json | 2 +- 2024-09-23 01:08:32,388 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-23 01:08:32,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:32,634 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:08:32,675 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:32,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:32,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:08:32,719 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:08:32,728 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef01318e0> has no local changes 2024-09-23 01:08:32,729 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:08:32,740 [ scc.git] DEBUG [detached HEAD 9b5ecd4] merge master -Dorg -Ssuccess-only 2024-09-23 01:08:32,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:08:32,741 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:08:33,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-23 01:08:33,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-23 01:08:34,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-23 01:08:34,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-23 01:08:35,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:35,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:36,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-23 01:08:36,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:36,434 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-23 01:08:36,435 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:08:36,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-23 01:08:36,435 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:36,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:36,440 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:08:36,445 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:08:36,445 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:08:36,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:08:36,456 [ scc.git] DEBUG Already up to date. 2024-09-23 01:08:36,456 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-23 01:08:36,769 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-23 01:08:36,769 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-23 01:08:36,774 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:08:36,774 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:36,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:36,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-23 01:08:36,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:36,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-23 01:08:36,805 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:36,807 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-23 01:08:36,808 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-23 01:08:36,808 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-23 01:08:36,808 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-23 01:08:36,808 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-23 01:08:36,808 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-23 01:08:36,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:36,943 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:08:36,989 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:36,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:36,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:08:37,039 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:08:37,046 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef0131b20> has no local changes 2024-09-23 01:08:37,047 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:08:37,057 [ scc.git] DEBUG [detached HEAD acedb18] merge master -Dorg -Ssuccess-only 2024-09-23 01:08:37,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:08:37,058 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:08:37,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-23 01:08:37,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-23 01:08:38,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-23 01:08:38,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-23 01:08:39,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:39,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-23 01:08:40,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:40,142 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-23 01:08:40,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-23 01:08:41,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-23 01:08:41,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-23 01:08:42,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:42,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-23 01:08:42,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:42,926 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-23 01:08:43,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-23 01:08:43,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-23 01:08:44,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-23 01:08:44,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:45,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-23 01:08:45,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:45,677 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-23 01:08:45,677 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:08:45,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-23 01:08:45,677 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:45,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:45,686 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:08:45,694 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:08:45,694 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:08:45,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:08:45,711 [ scc.git] DEBUG Already up to date. 2024-09-23 01:08:45,711 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-23 01:08:46,217 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-23 01:08:46,217 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-23 01:08:46,224 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-23 01:08:46,762 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-23 01:08:46,762 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-23 01:08:46,770 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-23 01:08:47,053 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-23 01:08:47,054 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-23 01:08:47,058 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:08:47,058 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:47,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:47,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-23 01:08:47,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:47,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-23 01:08:47,142 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-23 01:08:47,142 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-23 01:08:47,142 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-23 01:08:47,142 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-23 01:08:47,143 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:08:47,143 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:08:47,151 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-23 01:08:47,158 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-23 01:08:47,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:47,309 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-23 01:08:47,317 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-23 01:08:47,323 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-09-23 01:08:47,328 [ scc.config] DEBUG Found github.token 2024-09-23 01:08:47,328 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-23 01:08:47,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-23 01:08:47,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:47,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-23 01:08:47,374 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-23 01:08:47,374 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-23 01:08:47,374 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-23 01:08:47,374 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:08:47,375 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:08:47,382 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-23 01:08:47,389 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-23 01:08:47,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:47,710 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-23 01:08:47,717 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-23 01:08:47,723 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-23 01:08:47,727 [ scc.config] DEBUG Found github.token 2024-09-23 01:08:47,727 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-23 01:08:47,727 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-23 01:08:47,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:47,738 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-23 01:08:47,759 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:08:47,762 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-23 01:08:47,762 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-23 01:08:48,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:08:48,102 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:08:48,170 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:08:48,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:08:48,178 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:08:48,217 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:08:48,225 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef0128f40> has no local changes 2024-09-23 01:08:48,226 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:08:48,236 [ scc.git] DEBUG [detached HEAD 99e819f] merge master -Dorg -Ssuccess-only 2024-09-23 01:08:48,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:08:48,236 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:08:48,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-23 01:08:49,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-23 01:08:49,095 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:49,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-23 01:08:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:50,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:51,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-23 01:08:51,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:51,571 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-23 01:08:52,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-23 01:08:52,030 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:52,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-23 01:08:53,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:53,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:54,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-23 01:08:54,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:54,412 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-23 01:08:54,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-23 01:08:54,881 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-23 01:08:55,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-23 01:08:55,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:08:56,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:08:56,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-23 01:08:57,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:08:57,297 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-23 01:08:57,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-23 01:08:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-23 01:08:58,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-23 01:08:59,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-23 01:08:59,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-23 01:09:00,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-23 01:09:00,025 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:00,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-23 01:09:00,025 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:00,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:00,032 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:00,040 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:00,040 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:00,048 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:00,057 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:00,057 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-23 01:09:00,378 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-23 01:09:00,378 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-23 01:09:00,383 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-23 01:09:00,692 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-23 01:09:00,692 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-23 01:09:00,697 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-23 01:09:00,987 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-23 01:09:00,987 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-23 01:09:00,992 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:00,992 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:00,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:00,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-23 01:09:01,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:01,016 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-23 01:09:01,030 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:01,033 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-23 01:09:01,034 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-23 01:09:01,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:01,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-23 01:09:01,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:01,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-23 01:09:01,235 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-23 01:09:01,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:01,239 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-23 01:09:01,239 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-23 01:09:01,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:01,558 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-23 01:09:01,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:01,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-23 01:09:01,601 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-23 01:09:01,601 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:01,605 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-23 01:09:01,605 [ scc.git] DEBUG package.json | 2 +- 2024-09-23 01:09:01,606 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-23 01:09:01,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:01,948 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:01,993 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:01,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:02,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:02,047 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:02,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef012e400> has no local changes 2024-09-23 01:09:02,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:02,070 [ scc.git] DEBUG [detached HEAD f36d19b] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:02,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:02,071 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:02,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-23 01:09:02,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-23 01:09:03,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-23 01:09:03,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:04,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-23 01:09:04,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:04,753 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-23 01:09:04,753 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:04,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-23 01:09:04,754 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:04,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:04,759 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:04,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:04,765 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:04,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:04,776 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:04,776 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-23 01:09:05,073 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-23 01:09:05,073 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-23 01:09:05,083 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:05,083 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:05,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:05,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-23 01:09:05,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:05,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-23 01:09:05,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:05,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:05,307 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:05,404 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:05,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:05,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:05,503 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:05,511 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00f4b20> has no local changes 2024-09-23 01:09:05,511 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:05,522 [ scc.git] DEBUG [detached HEAD 271c97a] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:05,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:05,522 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:05,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-23 01:09:06,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-23 01:09:06,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-23 01:09:07,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-23 01:09:07,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-23 01:09:08,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:08,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-23 01:09:09,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:09,093 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-23 01:09:09,093 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:09,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-23 01:09:09,093 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:09,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:09,099 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:09,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:09,107 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:09,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:09,120 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:09,120 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-23 01:09:09,568 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-23 01:09:09,568 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-23 01:09:09,573 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:09,573 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:09,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:09,578 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-23 01:09:09,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:09,591 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-23 01:09:09,601 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-23 01:09:09,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:09,604 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-23 01:09:09,604 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-23 01:09:09,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:09,735 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:09,777 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:09,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:09,783 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:09,825 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:09,832 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00e8df0> has no local changes 2024-09-23 01:09:09,832 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:09,841 [ scc.git] DEBUG [detached HEAD 58e73a6] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:09,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:09,841 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:10,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-23 01:09:10,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-23 01:09:11,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-23 01:09:11,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-23 01:09:12,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:12,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-23 01:09:12,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:12,909 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-23 01:09:12,909 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:12,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-23 01:09:12,909 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:12,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:12,915 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:12,919 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:12,920 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:12,925 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:12,931 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:12,932 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-23 01:09:13,306 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-23 01:09:13,306 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-23 01:09:13,311 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:13,311 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:13,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:13,317 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-23 01:09:13,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:13,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-23 01:09:13,390 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-23 01:09:13,390 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG Auto-merging setup.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-23 01:09:13,391 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:09:13,391 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:09:13,398 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-23 01:09:13,405 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-23 01:09:13,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:13,584 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-23 01:09:13,592 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-23 01:09:13,599 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2024-09-23 01:09:13,605 [ scc.config] DEBUG Found github.token 2024-09-23 01:09:13,605 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-23 01:09:13,605 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:13,648 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:13,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:13,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:13,695 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:13,702 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00fbbe0> has no local changes 2024-09-23 01:09:13,702 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:13,710 [ scc.git] DEBUG [detached HEAD 28a5715] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:13,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:13,711 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:14,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-23 01:09:14,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-23 01:09:14,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-23 01:09:15,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-23 01:09:15,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:16,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-23 01:09:16,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:16,806 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-23 01:09:16,807 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:16,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-23 01:09:16,807 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:16,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:16,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:16,818 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:16,818 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:16,825 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:16,832 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:16,833 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-23 01:09:17,384 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-23 01:09:17,385 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-23 01:09:17,389 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:17,390 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:17,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:17,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-23 01:09:17,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:17,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-23 01:09:17,470 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-23 01:09:17,473 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-23 01:09:17,474 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-23 01:09:17,474 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-23 01:09:17,474 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-23 01:09:17,476 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-23 01:09:17,476 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-23 01:09:17,476 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-23 01:09:17,476 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-23 01:09:17,477 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-23 01:09:17,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:17,608 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:17,649 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:17,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:17,655 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:17,697 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:17,705 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00af640> has no local changes 2024-09-23 01:09:17,705 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:17,717 [ scc.git] DEBUG [detached HEAD dff40d5] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:17,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:17,718 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:18,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-23 01:09:18,012 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:18,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-23 01:09:18,013 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,019 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:18,024 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:18,024 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:18,031 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:18,039 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:18,039 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:18,039 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,045 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:18,087 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:18,133 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:18,140 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00b3520> has no local changes 2024-09-23 01:09:18,140 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:18,150 [ scc.git] DEBUG [detached HEAD 84da984] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:18,150 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:18,150 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:18,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-23 01:09:18,436 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:18,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-23 01:09:18,437 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,444 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:18,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:18,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:18,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:18,464 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:18,464 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:18,464 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,470 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:18,512 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:18,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:18,519 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:18,562 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:18,571 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00f4d60> has no local changes 2024-09-23 01:09:18,572 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:18,581 [ scc.git] DEBUG [detached HEAD 67ac591] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:18,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:18,581 [ scc.git] INFO Overriding base-branch from master to main 2024-09-23 01:09:18,581 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:18,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-23 01:09:19,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-23 01:09:19,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-23 01:09:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-23 01:09:20,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-23 01:09:21,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:21,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-23 01:09:22,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:22,148 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-23 01:09:22,148 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:22,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-23 01:09:22,148 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:22,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:22,155 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-23 01:09:22,162 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:22,162 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-23 01:09:22,169 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-23 01:09:22,177 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:22,177 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-23 01:09:22,559 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-23 01:09:22,559 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-23 01:09:22,564 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:22,564 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:22,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:22,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-23 01:09:22,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:22,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-23 01:09:22,665 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-23 01:09:22,665 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-23 01:09:22,665 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:09:22,666 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:09:22,673 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-23 01:09:22,681 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-23 01:09:22,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:22,814 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-23 01:09:22,822 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-23 01:09:22,830 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-23 01:09:22,836 [ scc.config] DEBUG Found github.token 2024-09-23 01:09:22,837 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-23 01:09:22,837 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:22,880 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:22,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:22,887 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:22,932 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:22,940 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef0059910> has no local changes 2024-09-23 01:09:22,940 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:22,950 [ scc.git] DEBUG [detached HEAD 9183a65] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:22,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:22,951 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:23,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-23 01:09:23,225 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:23,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-23 01:09:23,225 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:23,239 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:23,239 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:23,246 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:23,252 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:23,252 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:23,252 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,257 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:23,297 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,303 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:23,347 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:23,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef00a0d60> has no local changes 2024-09-23 01:09:23,355 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:23,366 [ scc.git] DEBUG [detached HEAD 507143f] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:23,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:23,367 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:23,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-23 01:09:23,637 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:23,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-23 01:09:23,637 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,643 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:23,649 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:23,649 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:23,655 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:23,661 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:23,661 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:23,661 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,661 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,667 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:23,712 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:23,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:23,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:23,757 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:23,768 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef0078ee0> has no local changes 2024-09-23 01:09:23,769 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:23,781 [ scc.git] DEBUG [detached HEAD 81bf657] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:23,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:23,782 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:24,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-23 01:09:24,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-23 01:09:24,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-23 01:09:25,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-23 01:09:25,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:26,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-23 01:09:26,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:26,828 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-23 01:09:26,828 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:26,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-23 01:09:26,828 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:26,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:26,835 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-23 01:09:26,841 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:26,841 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-23 01:09:26,846 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-23 01:09:26,853 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:26,853 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-23 01:09:27,206 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-23 01:09:27,206 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-23 01:09:27,211 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:27,212 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:27,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:27,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-23 01:09:27,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:27,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-23 01:09:27,247 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-23 01:09:27,248 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-23 01:09:27,248 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:09:27,248 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:09:27,256 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-23 01:09:27,265 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-23 01:09:27,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:27,397 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-23 01:09:27,404 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-23 01:09:27,412 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-23 01:09:27,419 [ scc.config] DEBUG Found github.token 2024-09-23 01:09:27,420 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-23 01:09:27,420 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:27,463 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:27,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:27,471 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:27,516 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:27,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef007bbe0> has no local changes 2024-09-23 01:09:27,524 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:27,534 [ scc.git] DEBUG [detached HEAD d157cbd] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:27,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:27,535 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-23 01:09:27,535 [ scc.repo] DEBUG ## PRs found: 2024-09-23 01:09:28,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-23 01:09:28,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-23 01:09:28,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-23 01:09:29,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:29,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-23 01:09:30,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-23 01:09:30,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:30,698 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-23 01:09:31,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-23 01:09:31,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-23 01:09:32,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-23 01:09:32,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-23 01:09:33,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-23 01:09:33,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-23 01:09:34,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-23 01:09:34,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-23 01:09:34,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-23 01:09:35,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-23 01:09:35,331 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-23 01:09:35,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-23 01:09:36,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-23 01:09:36,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-23 01:09:37,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-23 01:09:37,375 [ scc.repo] DEBUG ## Branches found: 2024-09-23 01:09:37,375 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-23 01:09:37,375 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:37,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:37,383 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-23 01:09:37,388 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-23 01:09:37,388 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-23 01:09:37,394 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-23 01:09:37,401 [ scc.git] DEBUG Already up to date. 2024-09-23 01:09:37,401 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-23 01:09:37,812 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-23 01:09:37,812 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-23 01:09:37,817 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-23 01:09:38,156 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-23 01:09:38,156 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-23 01:09:38,161 [ scc.git] DEBUG ## Unique users: [] 2024-09-23 01:09:38,161 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:38,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:38,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-23 01:09:38,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:38,180 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-23 01:09:38,254 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-23 01:09:38,254 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-23 01:09:38,254 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-23 01:09:38,255 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-23 01:09:38,261 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-23 01:09:38,268 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-23 01:09:38,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:38,423 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-23 01:09:38,431 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-23 01:09:38,437 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#192](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-23 01:09:38,443 [ scc.config] DEBUG Found github.token 2024-09-23 01:09:38,443 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-23 01:09:38,443 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-23 01:09:38,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:38,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-23 01:09:38,472 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-23 01:09:38,475 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-23 01:09:38,475 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-23 01:09:38,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:38,805 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-23 01:09:38,847 [ scc.git] DEBUG Get sha1 of %s 2024-09-23 01:09:38,848 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-23 01:09:38,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:38,896 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:38,903 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ee07f75b0> has no local changes 2024-09-23 01:09:38,903 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:38,912 [ scc.git] DEBUG [detached HEAD a985e6e] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:38,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:38,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-23 01:09:38,995 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-23 01:09:39,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:39,196 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-23 01:09:39,202 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-23 01:09:39,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:39,578 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-23 01:09:39,586 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-23 01:09:39,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:39,968 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-23 01:09:39,973 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-23 01:09:40,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:40,361 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-23 01:09:40,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:40,737 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-23 01:09:40,742 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-23 01:09:41,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:41,132 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-23 01:09:41,138 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-23 01:09:41,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:41,523 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-23 01:09:41,528 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-23 01:09:41,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:41,907 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-23 01:09:41,914 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-23 01:09:42,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:42,307 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-23 01:09:42,312 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-23 01:09:42,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:42,688 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-23 01:09:42,693 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-23 01:09:43,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:43,068 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-23 01:09:43,073 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-23 01:09:43,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:43,469 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-23 01:09:43,474 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-23 01:09:43,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:43,868 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-23 01:09:44,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:44,334 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-23 01:09:44,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:44,725 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-23 01:09:44,732 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-23 01:09:45,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:45,118 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-23 01:09:45,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:45,501 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-23 01:09:45,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:45,880 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-23 01:09:45,886 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-23 01:09:46,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:46,269 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-23 01:09:46,274 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-23 01:09:46,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:46,652 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-23 01:09:46,658 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-23 01:09:47,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:47,064 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-23 01:09:47,071 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-23 01:09:47,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-23 01:09:47,451 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-23 01:09:47,451 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-23 01:09:47,542 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1ef272ab80> has local changes 2024-09-23 01:09:47,543 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#192 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/192/)' 2024-09-23 01:09:47,558 [ scc.git] DEBUG [detached HEAD e55534d] merge master -Dorg -Ssuccess-only 2024-09-23 01:09:47,558 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-23 01:09:47,558 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-23 01:09:47,558 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 390 dependabot[bot] 'Bump omero-figure from `5f62399` to `f9a321d`' 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-23 01:09:47,559 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-23 01:09:47,559 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-23 01:09:47,559 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-23 01:09:47,559 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-23 01:09:47,559 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,559 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-23 01:09:47,559 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,559 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-23 01:09:47,559 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,559 [ scc.merge] INFO 2024-09-23 01:09:47,560 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-23 01:09:47,560 [ scc.merge] INFO 2024-09-23 01:09:47,560 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-23 01:09:47,560 [ scc.merge] INFO 2024-09-23 01:09:47,560 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-23 01:09:47,560 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' (status: action_required) 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 588 dependabot[bot] 'Bump dompurify from 2.4.3 to 2.5.4' (status: failure) 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-23 01:09:47,560 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,560 [ scc.merge] INFO 2024-09-23 01:09:47,560 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-23 01:09:47,560 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 590 dependabot[bot] 'Bump vite from 3.2.10 to 3.2.11' 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-23 01:09:47,561 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-23 01:09:47,561 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-23 01:09:47,561 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-23 01:09:47,561 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,561 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-23 01:09:47,561 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,561 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-23 01:09:47,561 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,561 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-23 01:09:47,562 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-23 01:09:47,562 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-23 01:09:47,562 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-23 01:09:47,562 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-23 01:09:47,562 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-23 01:09:47,562 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,562 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,562 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-23 01:09:47,562 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,563 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,563 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-23 01:09:47,563 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,563 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,563 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,563 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-23 01:09:47,563 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,563 [ scc.merge] INFO 2024-09-23 01:09:47,564 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-23 01:09:47,564 [ scc.merge] INFO 2024-09-23 01:09:47,564 [ scc.merge] INFO Repository: ome/scripts 2024-09-23 01:09:47,564 [ scc.merge] INFO Excluded PRs: 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-23 01:09:47,564 [ scc.merge] INFO Already up to date. 2024-09-23 01:09:47,564 [ scc.merge] INFO 2024-09-23 01:09:47,564 [ scc.merge] INFO Merged PRs: 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-23 01:09:47,564 [ scc.merge] INFO 2024-09-23 01:09:47,564 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-23 01:09:47,564 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-23 01:09:47,564 [ scc.merge] INFO 2024-09-23 01:09:47,564 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-23 01:09:47,564 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-23 01:09:47,570 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-23 01:09:47,575 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-23 01:09:47,582 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-23 01:09:47,588 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-23 01:09:47,593 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-23 01:09:47,600 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-23 01:09:47,607 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-23 01:09:47,612 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-23 01:09:47,618 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-23 01:09:47,624 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-23 01:09:47,629 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-23 01:09:47,635 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-23 01:09:47,640 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,646 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-23 01:09:47,646 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-23 01:09:47,652 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-23 01:09:47,658 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-23 01:09:47,664 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-23 01:09:47,669 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-23 01:09:47,676 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-23 01:09:47,682 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-23 01:09:47,688 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-23 01:09:47,695 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-23 01:09:47,695 [ scc.git] DEBUG Calling 'git remote' 2024-09-23 01:09:47,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 4e7703b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from f9a321dd nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD d441808] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-23 01:10:32,822 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-23 01:10:41,575 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-23 01:10:43,844 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-23 01:10:48,319 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-23 01:11:26,835 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS