![[Jenkins]](/jenkins/static/24d5bb62/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 228 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 195 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-09-27 04:42:05,899 [ scc.config] DEBUG Found github.token 2024-09-27 04:42:05,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-27 04:42:06,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:42:06,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:42:06,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-27 04:42:06,869 [ scc.gh] DEBUG 4268 remaining from 5000 (Reset at 05:09 2024-09-27 04:42:06,870 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:06,873 [ scc.git] DEBUG Check current status 2024-09-27 04:42:06,874 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:06,878 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-27 04:42:06,879 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:06,930 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-27 04:42:06,933 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-27 04:42:06,936 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-27 04:42:06,941 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-27 04:42:06,946 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-27 04:42:06,949 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-27 04:42:06,952 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-27 04:42:06,996 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-27 04:42:06,999 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-27 04:42:07,002 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-27 04:42:07,005 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-27 04:42:07,007 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-27 04:42:07,011 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-27 04:42:07,014 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-27 04:42:07,032 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-27 04:42:07,035 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-27 04:42:07,037 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-27 04:42:07,040 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-27 04:42:07,043 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-27 04:42:07,045 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-27 04:42:07,048 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-27 04:42:07,052 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-27 04:42:07,056 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:07,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-27 04:42:07,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:08,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:08,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:08,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:08,998 [ scc.git] DEBUG Resetting... 2024-09-27 04:42:08,998 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-27 04:42:09,007 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-27 04:42:09,008 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-27 04:42:09,105 [ scc.git] DEBUG Check current status 2024-09-27 04:42:09,106 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:09,109 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-09-27 04:42:09,110 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:09,170 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-27 04:42:09,175 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-27 04:42:09,178 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-27 04:42:09,182 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-27 04:42:09,188 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-09-27 04:42:09,191 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-27 04:42:09,195 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-27 04:42:09,199 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-27 04:42:09,203 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-27 04:42:09,206 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-27 04:42:09,209 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-27 04:42:09,212 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-27 04:42:09,215 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-27 04:42:09,218 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-27 04:42:09,223 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-27 04:42:09,226 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-27 04:42:09,230 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-27 04:42:09,232 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-27 04:42:09,235 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-27 04:42:09,237 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-27 04:42:09,240 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-27 04:42:09,243 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-27 04:42:09,245 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-27 04:42:09,245 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-27 04:42:09,245 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-27 04:42:09,245 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-27 04:42:09,245 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-27 04:42:09,245 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:42:09,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-27 04:42:09,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-09-27 04:42:09,971 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:42:09,971 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-09-27 04:42:09,971 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:42:09,971 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:42:09,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:42:09,976 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:42:09,979 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:42:09,979 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:42:09,983 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:42:09,987 [ scc.git] DEBUG Already up to date. 2024-09-27 04:42:09,987 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-09-27 04:42:10,312 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-27 04:42:10,313 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-09-27 04:42:10,319 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:42:10,319 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:42:10,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:42:10,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-09-27 04:42:10,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:42:10,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-09-27 04:42:10,346 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:42:10,348 [ scc.git] DEBUG omero-figure | 2 +- 2024-09-27 04:42:10,348 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-27 04:42:10,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:42:10,481 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:42:10,549 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-09-27 04:42:10,549 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:42:10,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:42:10,553 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:42:11,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7febf3cd1b80> has no local changes 2024-09-27 04:42:11,899 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:42:11,970 [ scc.git] DEBUG [detached HEAD 6aebf8f] merge master -Dorg -Snone 2024-09-27 04:42:11,970 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-27 04:42:11,970 [ scc.merge] INFO Already up to date. 2024-09-27 04:42:11,970 [ scc.merge] INFO 2024-09-27 04:42:11,970 [ scc.merge] INFO Merged PRs: 2024-09-27 04:42:11,971 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-09-27 04:42:11,971 [ scc.merge] INFO 2024-09-27 04:42:11,971 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-27 04:42:11,971 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-09-27 04:42:19,877 [ scc.config] DEBUG Found github.token 2024-09-27 04:42:19,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-09-27 04:42:20,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:42:20,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:42:20,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-09-27 04:42:20,828 [ scc.gh] DEBUG 4258 remaining from 5000 (Reset at 05:09 2024-09-27 04:42:20,829 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:20,833 [ scc.git] DEBUG Check current status 2024-09-27 04:42:20,833 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:20,837 [ scc.git] DEBUG 6aebf8f merge master -Dorg -Snone 2024-09-27 04:42:20,837 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:20,883 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-27 04:42:20,885 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-27 04:42:20,888 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-27 04:42:20,891 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-27 04:42:20,901 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-09-27 04:42:20,903 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-27 04:42:20,906 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-27 04:42:20,909 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-27 04:42:20,912 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-27 04:42:20,915 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-27 04:42:20,918 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-27 04:42:20,920 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-27 04:42:20,923 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-27 04:42:20,926 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-27 04:42:20,929 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-27 04:42:20,931 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-27 04:42:20,934 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-27 04:42:20,936 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-27 04:42:20,939 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-27 04:42:20,941 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-27 04:42:20,944 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-27 04:42:20,948 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-27 04:42:20,952 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:20,952 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-09-27 04:42:20,954 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-09-27 04:42:21,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-09-27 04:42:21,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:22,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:22,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:22,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:22,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:23,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-27 04:42:23,059 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:23,063 [ scc.git] DEBUG Check current status 2024-09-27 04:42:23,063 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:23,068 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-09-27 04:42:23,068 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:23,115 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-09-27 04:42:23,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:24,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:24,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:25,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:25,109 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:25,147 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:25,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-27 04:42:25,148 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:25,152 [ scc.git] DEBUG Check current status 2024-09-27 04:42:25,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:25,156 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-09-27 04:42:25,156 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:25,197 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:25,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-09-27 04:42:26,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:26,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:26,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:27,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:27,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:27,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:27,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-27 04:42:27,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:27,313 [ scc.git] DEBUG Check current status 2024-09-27 04:42:27,313 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:27,317 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-09-27 04:42:27,318 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:27,360 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:27,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-09-27 04:42:28,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:28,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:28,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:29,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:29,374 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:29,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:29,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-27 04:42:29,413 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:29,418 [ scc.git] DEBUG Check current status 2024-09-27 04:42:29,418 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:29,422 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-27 04:42:29,422 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:29,462 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:29,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-09-27 04:42:30,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:30,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:31,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:31,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:31,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:31,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:31,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-27 04:42:31,530 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:31,535 [ scc.git] DEBUG Check current status 2024-09-27 04:42:31,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:31,540 [ scc.git] DEBUG 8a70fe9a Merge pull request #588 from ome/dependabot/npm_and_yarn/dompurify-2.5.4 2024-09-27 04:42:31,540 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:31,582 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:31,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-09-27 04:42:32,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:32,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:33,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:33,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:33,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:33,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:33,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-27 04:42:33,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:33,605 [ scc.git] DEBUG Check current status 2024-09-27 04:42:33,605 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:33,609 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-27 04:42:33,609 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:33,654 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:34,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-09-27 04:42:34,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:34,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:35,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:35,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:35,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:35,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:35,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-27 04:42:35,773 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:35,778 [ scc.git] DEBUG Check current status 2024-09-27 04:42:35,778 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:35,783 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-09-27 04:42:35,783 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:35,831 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:36,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-09-27 04:42:36,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:37,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:37,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:37,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:37,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:37,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:37,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-27 04:42:37,856 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:37,862 [ scc.git] DEBUG Check current status 2024-09-27 04:42:37,862 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:37,867 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-09-27 04:42:37,867 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:37,909 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:38,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-09-27 04:42:38,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:39,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:39,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:39,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:39,898 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:39,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:39,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-27 04:42:39,938 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:39,943 [ scc.git] DEBUG Check current status 2024-09-27 04:42:39,943 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:39,948 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-09-27 04:42:39,948 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:39,989 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:40,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-09-27 04:42:40,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:41,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:41,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:42,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:42,014 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:42,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:42,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-27 04:42:42,056 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:42,060 [ scc.git] DEBUG Check current status 2024-09-27 04:42:42,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:42,064 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-27 04:42:42,065 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:42,107 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:42,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-09-27 04:42:42,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:43,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:43,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:44,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:44,116 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:44,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:44,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-27 04:42:44,157 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:44,162 [ scc.git] DEBUG Check current status 2024-09-27 04:42:44,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:44,166 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-09-27 04:42:44,166 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:44,208 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:44,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-09-27 04:42:45,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:45,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:45,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:46,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:46,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:46,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:46,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-27 04:42:46,327 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:46,332 [ scc.git] DEBUG Check current status 2024-09-27 04:42:46,332 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:46,336 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-09-27 04:42:46,336 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:46,375 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:46,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-09-27 04:42:47,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:47,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:48,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:48,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:48,403 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:48,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:48,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-27 04:42:48,449 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:48,455 [ scc.git] DEBUG Check current status 2024-09-27 04:42:48,455 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:48,461 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-09-27 04:42:48,461 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:48,509 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:48,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-09-27 04:42:49,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:49,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:50,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:50,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:50,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:50,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:50,611 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-27 04:42:50,611 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:50,616 [ scc.git] DEBUG Check current status 2024-09-27 04:42:50,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:50,621 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-27 04:42:50,622 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:50,667 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:51,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-09-27 04:42:51,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:51,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:52,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:52,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:52,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:52,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:52,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-27 04:42:52,722 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:52,728 [ scc.git] DEBUG Check current status 2024-09-27 04:42:52,728 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:52,732 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-09-27 04:42:52,733 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:52,773 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:53,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-27 04:42:53,084 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-27 04:42:53,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-09-27 04:42:53,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:54,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:54,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:54,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:54,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:55,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:55,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-27 04:42:55,031 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:55,036 [ scc.git] DEBUG Check current status 2024-09-27 04:42:55,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:55,040 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-09-27 04:42:55,040 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:55,081 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:55,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-09-27 04:42:55,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:56,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:56,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:57,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:57,091 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:57,131 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:57,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-27 04:42:57,133 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:57,138 [ scc.git] DEBUG Check current status 2024-09-27 04:42:57,139 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:57,143 [ scc.git] DEBUG deab817 update setup-python to v4 2024-09-27 04:42:57,143 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:57,186 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:57,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-09-27 04:42:58,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:42:58,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:42:58,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:42:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:42:59,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:42:59,247 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:42:59,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-27 04:42:59,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:42:59,254 [ scc.git] DEBUG Check current status 2024-09-27 04:42:59,255 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:42:59,259 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-27 04:42:59,260 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:42:59,304 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:42:59,305 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-09-27 04:42:59,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-09-27 04:43:00,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:43:00,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:43:00,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:01,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:43:01,301 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:01,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:01,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-27 04:43:01,343 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:43:01,349 [ scc.git] DEBUG Check current status 2024-09-27 04:43:01,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:43:01,354 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-09-27 04:43:01,354 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:43:01,397 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:43:01,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-27 04:43:01,713 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-27 04:43:01,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-09-27 04:43:02,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:43:02,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:43:03,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:03,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:43:03,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:03,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:03,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-27 04:43:03,636 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:43:03,642 [ scc.git] DEBUG Check current status 2024-09-27 04:43:03,642 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:43:03,648 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-09-27 04:43:03,648 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:43:03,697 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:43:03,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-27 04:43:03,995 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-27 04:43:04,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-09-27 04:43:04,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:43:05,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:43:05,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:05,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:43:05,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:05,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:05,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-27 04:43:05,875 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:43:05,882 [ scc.git] DEBUG Check current status 2024-09-27 04:43:05,882 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:43:05,887 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-27 04:43:05,888 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:43:05,933 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:43:06,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-09-27 04:43:06,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:43:07,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:43:07,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:07,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:43:07,950 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:07,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:07,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-27 04:43:07,990 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-09-27 04:43:07,995 [ scc.git] DEBUG Check current status 2024-09-27 04:43:07,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:43:08,000 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-27 04:43:08,001 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:43:08,043 [ scc.config] DEBUG Found remote.origin.url 2024-09-27 04:43:08,044 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-09-27 04:43:08,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-27 04:43:08,349 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-27 04:43:08,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-09-27 04:43:09,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-09-27 04:43:09,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-09-27 04:43:09,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:10,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-09-27 04:43:10,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:10,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:10,320 [ scc.git] DEBUG Resetting... 2024-09-27 04:43:10,320 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-09-27 04:43:10,331 [ scc.git] DEBUG HEAD is now at 6aebf8f merge master -Dorg -Snone 2024-09-27 04:43:10,331 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-09-27 04:43:10,446 [ scc.git] DEBUG Check current status 2024-09-27 04:43:10,446 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-09-27 04:43:10,454 [ scc.git] DEBUG 6aebf8f merge master -Dorg -Snone 2024-09-27 04:43:10,454 [ scc.git] DEBUG Calling 'git submodule status' 2024-09-27 04:43:10,507 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-09-27 04:43:10,510 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-09-27 04:43:10,513 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-09-27 04:43:10,516 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-09-27 04:43:10,527 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-09-27 04:43:10,530 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-09-27 04:43:10,533 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-09-27 04:43:10,536 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-09-27 04:43:10,540 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-09-27 04:43:10,543 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-09-27 04:43:10,545 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-09-27 04:43:10,548 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-09-27 04:43:10,551 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-09-27 04:43:10,554 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-09-27 04:43:10,557 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-09-27 04:43:10,559 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-09-27 04:43:10,562 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-09-27 04:43:10,565 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-09-27 04:43:10,567 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-09-27 04:43:10,570 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-09-27 04:43:10,573 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-09-27 04:43:10,577 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-09-27 04:43:10,578 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-09-27 04:43:10,578 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-09-27 04:43:10,578 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-09-27 04:43:10,578 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-09-27 04:43:10,578 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-09-27 04:43:10,578 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-09-27 04:43:10,578 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:10,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-09-27 04:43:11,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-09-27 04:43:11,264 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:43:11,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-09-27 04:43:12,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:12,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-09-27 04:43:13,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/7936c8fae005c71325227cff2777148cf7af1def?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:13,027 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-09-27 04:43:13,028 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:43:13,028 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:13,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:13,036 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:43:13,041 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:43:13,041 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:43:13,047 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:43:13,053 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:13,054 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-09-27 04:43:13,376 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-09-27 04:43:13,377 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-09-27 04:43:13,384 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:43:13,384 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:13,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:13,389 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-09-27 04:43:13,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:13,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-09-27 04:43:13,405 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:13,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:13,545 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:43:13,602 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:13,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:13,608 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:14,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-09-27 04:43:14,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-09-27 04:43:14,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-27 04:43:15,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:15,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:16,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-09-27 04:43:16,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:16,764 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-09-27 04:43:16,764 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:43:16,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-27 04:43:16,764 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:16,764 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:16,771 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:43:16,776 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:43:16,776 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:43:16,782 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:43:16,789 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:16,789 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-09-27 04:43:17,246 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-09-27 04:43:17,246 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-09-27 04:43:17,251 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:43:17,251 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:17,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:17,257 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-27 04:43:17,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:17,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-09-27 04:43:17,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:43:17,282 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-09-27 04:43:17,283 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-09-27 04:43:17,283 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-09-27 04:43:17,283 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-09-27 04:43:17,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:17,413 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:43:17,454 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:17,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:17,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:17,500 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:43:17,507 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1a1bde50> has no local changes 2024-09-27 04:43:17,508 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:43:17,519 [ scc.git] DEBUG [detached HEAD 06a6050] merge master -Dorg -Ssuccess-only 2024-09-27 04:43:17,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:17,519 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:17,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-09-27 04:43:18,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-09-27 04:43:18,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-09-27 04:43:19,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-27 04:43:19,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:20,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:21,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-09-27 04:43:22,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:22,108 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-09-27 04:43:22,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-09-27 04:43:23,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-09-27 04:43:23,038 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:43:23,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-27 04:43:23,039 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:23,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:23,046 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:43:23,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:43:23,052 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:43:23,058 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:43:23,064 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:23,065 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-09-27 04:43:23,402 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-09-27 04:43:23,402 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-09-27 04:43:23,407 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:43:23,407 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:23,407 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:23,413 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-27 04:43:23,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:23,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-09-27 04:43:23,501 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:43:23,504 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-09-27 04:43:23,504 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-09-27 04:43:23,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:23,633 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:43:23,670 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:23,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:23,675 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:23,712 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:43:23,719 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f183fce20> has no local changes 2024-09-27 04:43:23,719 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:43:23,727 [ scc.git] DEBUG [detached HEAD 7ce2207] merge master -Dorg -Ssuccess-only 2024-09-27 04:43:23,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:23,728 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:24,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-09-27 04:43:24,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-09-27 04:43:25,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-09-27 04:43:25,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-09-27 04:43:26,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-09-27 04:43:26,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-27 04:43:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:27,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-09-27 04:43:27,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:27,850 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-09-27 04:43:28,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-09-27 04:43:28,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-09-27 04:43:29,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-09-27 04:43:29,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-09-27 04:43:30,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-09-27 04:43:30,096 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:43:30,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-27 04:43:30,096 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:30,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:30,102 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:43:30,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:43:30,109 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:43:30,116 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:43:30,123 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:30,123 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-09-27 04:43:31,109 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-09-27 04:43:31,109 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-09-27 04:43:31,114 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:43:31,114 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:31,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:31,121 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-27 04:43:31,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:31,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-09-27 04:43:31,205 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-09-27 04:43:31,206 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:43:31,210 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-09-27 04:43:31,210 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-09-27 04:43:31,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:31,340 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:43:31,383 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:31,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:31,390 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:31,432 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:43:31,439 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1841ed00> has no local changes 2024-09-27 04:43:31,439 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:43:31,466 [ scc.git] DEBUG [detached HEAD 72d4da2] merge master -Dorg -Ssuccess-only 2024-09-27 04:43:31,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:31,467 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:31,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-09-27 04:43:32,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-09-27 04:43:32,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-09-27 04:43:33,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-09-27 04:43:33,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-27 04:43:34,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:35,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-27 04:43:35,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:36,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-09-27 04:43:36,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-09-27 04:43:36,513 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-09-27 04:43:37,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-09-27 04:43:37,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-09-27 04:43:38,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-09-27 04:43:38,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-27 04:43:38,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:39,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-09-27 04:43:39,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:39,818 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-27 04:43:40,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-09-27 04:43:40,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-09-27 04:43:41,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-27 04:43:41,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:42,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-09-27 04:43:42,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:42,621 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-09-27 04:43:42,621 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:43:42,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-27 04:43:42,622 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:42,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:42,629 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:43:42,634 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:43:42,634 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:43:42,641 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:43:42,647 [ scc.git] DEBUG Already up to date. 2024-09-27 04:43:42,648 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-09-27 04:43:42,954 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-27 04:43:42,954 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-09-27 04:43:42,959 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-09-27 04:43:43,255 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-27 04:43:43,255 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-09-27 04:43:43,260 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-09-27 04:43:43,581 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-09-27 04:43:43,581 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-09-27 04:43:43,586 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:43:43,586 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:43,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:43,592 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-27 04:43:43,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:43,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-27 04:43:43,618 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-27 04:43:43,618 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-27 04:43:43,618 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-27 04:43:43,618 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:43:43,619 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:43:43,626 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-27 04:43:43,632 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-27 04:43:43,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:43,772 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-09-27 04:43:43,785 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-27 04:43:43,793 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-09-27 04:43:43,798 [ scc.config] DEBUG Found github.token 2024-09-27 04:43:43,798 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-09-27 04:43:43,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-27 04:43:43,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:43,809 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-27 04:43:43,821 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-09-27 04:43:43,821 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-09-27 04:43:43,821 [ scc.git] DEBUG Auto-merging setup.py 2024-09-27 04:43:43,821 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-09-27 04:43:43,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-27 04:43:43,822 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-09-27 04:43:43,822 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-09-27 04:43:43,822 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:43:43,822 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:43:43,828 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-27 04:43:43,834 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-09-27 04:43:44,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:44,165 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-09-27 04:43:44,172 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-09-27 04:43:44,177 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-09-27 04:43:44,182 [ scc.config] DEBUG Found github.token 2024-09-27 04:43:44,182 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-09-27 04:43:44,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-27 04:43:44,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:44,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-09-27 04:43:44,373 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-09-27 04:43:44,374 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-09-27 04:43:44,374 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:43:44,378 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-09-27 04:43:44,378 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-09-27 04:43:44,378 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-09-27 04:43:44,378 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-09-27 04:43:44,378 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-09-27 04:43:44,378 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-09-27 04:43:44,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:43:44,574 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:43:44,617 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:43:44,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:43:44,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:43:44,666 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:43:44,673 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18421eb0> has no local changes 2024-09-27 04:43:44,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:43:44,682 [ scc.git] DEBUG [detached HEAD 3aff45a] merge master -Dorg -Ssuccess-only 2024-09-27 04:43:44,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:43:44,682 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:43:45,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-09-27 04:43:45,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-09-27 04:43:46,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-09-27 04:43:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-09-27 04:43:47,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:47,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:48,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-09-27 04:43:48,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:48,489 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-09-27 04:43:48,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-09-27 04:43:49,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-09-27 04:43:49,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-09-27 04:43:50,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-09-27 04:43:50,302 [ scc.repo] DEBUG # ... Include label: include 2024-09-27 04:43:50,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff HTTP/1.1" 200 None 2024-09-27 04:43:51,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:51,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:52,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bafdba12cea778932f288783a45850dd66d047ff HTTP/1.1" 200 None 2024-09-27 04:43:52,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bafdba12cea778932f288783a45850dd66d047ff?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:52,586 [ scc.repo] DEBUG - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-09-27 04:43:53,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-09-27 04:43:53,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-27 04:43:53,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:54,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:54,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-09-27 04:43:55,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:55,216 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-09-27 04:43:55,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-09-27 04:43:56,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-09-27 04:43:56,128 [ scc.repo] DEBUG # ... Include label: include 2024-09-27 04:43:56,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-27 04:43:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:43:57,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:43:58,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15d28a393f071234c3a7355829cbc9a4521246f8 HTTP/1.1" 200 None 2024-09-27 04:43:58,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15d28a393f071234c3a7355829cbc9a4521246f8?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:43:58,545 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-09-27 04:43:58,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-09-27 04:43:59,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-09-27 04:43:59,439 [ scc.repo] DEBUG # ... Include label: include 2024-09-27 04:43:59,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-27 04:44:00,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:00,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:01,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-09-27 04:44:01,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:01,701 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-27 04:44:02,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-09-27 04:44:02,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-09-27 04:44:03,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-09-27 04:44:03,115 [ scc.repo] DEBUG # ... Include label: include 2024-09-27 04:44:03,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-27 04:44:04,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:04,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:05,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0 HTTP/1.1" 200 None 2024-09-27 04:44:05,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/243ea0cf6ee3b040b93543ddddf0458dd05d8cf0?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:05,534 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-09-27 04:44:05,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-09-27 04:44:06,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-09-27 04:44:06,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-09-27 04:44:06,996 [ scc.repo] DEBUG # ... Include label: include 2024-09-27 04:44:07,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-27 04:44:08,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:08,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:09,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/05cc29816c5dc4252e0704936ab7463bd719dab7 HTTP/1.1" 200 None 2024-09-27 04:44:09,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/05cc29816c5dc4252e0704936ab7463bd719dab7?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:09,422 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-09-27 04:44:09,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-09-27 04:44:10,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-09-27 04:44:10,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-27 04:44:11,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:11,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:12,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-09-27 04:44:12,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:12,692 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-27 04:44:13,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-09-27 04:44:13,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-09-27 04:44:14,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-27 04:44:14,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:15,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:15,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-09-27 04:44:16,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:16,051 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-09-27 04:44:16,051 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:44:16,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-27 04:44:16,052 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:16,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:16,060 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:44:16,067 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:44:16,067 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:44:16,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:44:16,083 [ scc.git] DEBUG Already up to date. 2024-09-27 04:44:16,084 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-09-27 04:44:16,456 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:16,457 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-09-27 04:44:16,462 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-09-27 04:44:16,872 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:16,873 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-09-27 04:44:16,878 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-09-27 04:44:17,754 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:17,754 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-09-27 04:44:17,760 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-09-27 04:44:18,060 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:18,061 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-09-27 04:44:18,067 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-09-27 04:44:18,380 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:18,380 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-09-27 04:44:18,387 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-09-27 04:44:18,673 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:18,673 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-09-27 04:44:18,679 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-09-27 04:44:18,968 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:18,968 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-09-27 04:44:18,975 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head' 2024-09-27 04:44:19,782 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:19,782 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD 2024-09-27 04:44:19,789 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-09-27 04:44:20,152 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-09-27 04:44:20,153 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-09-27 04:44:20,160 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:44:20,160 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:20,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:20,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-27 04:44:20,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:20,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-09-27 04:44:20,632 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-27 04:44:20,632 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-27 04:44:20,632 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-27 04:44:20,632 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-09-27 04:44:20,632 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-27 04:44:20,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:20,639 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-09-27 04:44:20,639 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-09-27 04:44:20,639 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-09-27 04:44:20,639 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-09-27 04:44:20,640 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-09-27 04:44:20,642 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-09-27 04:44:20,642 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-09-27 04:44:20,642 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-09-27 04:44:20,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:20,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-27 04:44:20,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:20,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-09-27 04:44:20,813 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:20,817 [ scc.git] DEBUG setup.py | 2 +- 2024-09-27 04:44:20,817 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-09-27 04:44:21,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:21,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-27 04:44:21,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:21,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-27 04:44:21,609 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-27 04:44:21,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-27 04:44:21,610 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-27 04:44:21,610 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-09-27 04:44:21,610 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-09-27 04:44:21,610 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-09-27 04:44:21,610 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:44:21,610 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:44:21,619 [ scc.git] DEBUG Calling 'git reset --hard ba5939d41b7b3892db220030715a5d482c8ffdef' 2024-09-27 04:44:21,630 [ scc.git] DEBUG HEAD is now at ba5939d4 merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-09-27 04:44:21,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:21,767 [ scc.git] DEBUG Calling 'git merge-base 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 05cc29816c5dc4252e0704936ab7463bd719dab7' 2024-09-27 04:44:21,775 [ scc.git] DEBUG Calling 'git diff --name-only f9a321ddfb64f6b82c281aad0fbbcb134ce6eb53..8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-09-27 04:44:21,781 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-09-27 04:44:21,786 [ scc.config] DEBUG Found github.token 2024-09-27 04:44:21,786 [ scc.git] DEBUG Adding comment to issue #577. 2024-09-27 04:44:22,561 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-09-27 04:44:22,563 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-27 04:44:22,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:22,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 243ea0cf6ee3b040b93543ddddf0458dd05d8cf0' 2024-09-27 04:44:22,840 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-09-27 04:44:22,840 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-09-27 04:44:22,840 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-27 04:44:22,841 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:22,849 [ scc.git] DEBUG .gitignore | 2 + 2024-09-27 04:44:22,849 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-09-27 04:44:22,849 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-09-27 04:44:22,849 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-09-27 04:44:22,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:22,987 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-27 04:44:22,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:23,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-09-27 04:44:23,024 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-09-27 04:44:23,025 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:23,030 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-09-27 04:44:23,030 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-09-27 04:44:23,030 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-09-27 04:44:23,030 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-09-27 04:44:23,030 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-09-27 04:44:23,030 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-09-27 04:44:23,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:23,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-27 04:44:23,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:23,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 15d28a393f071234c3a7355829cbc9a4521246f8' 2024-09-27 04:44:23,622 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:23,627 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-09-27 04:44:23,627 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-09-27 04:44:23,627 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-09-27 04:44:23,627 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-09-27 04:44:23,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:23,772 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-27 04:44:23,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:23,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-09-27 04:44:23,808 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:23,811 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-09-27 04:44:23,812 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-09-27 04:44:24,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:24,180 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bafdba12cea778932f288783a45850dd66d047ff' 2024-09-27 04:44:24,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:24,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (implemented get_timestamps() from timeIncrement attribute) bafdba12cea778932f288783a45850dd66d047ff' 2024-09-27 04:44:24,221 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:24,225 [ scc.git] DEBUG omero_figure/omeroutils.py | 37 ++++++++++++++++++++++++++++++------- 2024-09-27 04:44:24,225 [ scc.git] DEBUG 1 file changed, 30 insertions(+), 7 deletions(-) 2024-09-27 04:44:24,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:24,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-09-27 04:44:24,581 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:24,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-09-27 04:44:24,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:24,608 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-09-27 04:44:24,608 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-09-27 04:44:24,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:24,962 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:44:25,013 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:25,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:25,020 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:44:25,060 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:44:25,069 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1841a880> has no local changes 2024-09-27 04:44:25,069 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:44:25,080 [ scc.git] DEBUG [detached HEAD 5a687a66] merge master -Dorg -Ssuccess-only 2024-09-27 04:44:25,081 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:44:25,081 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:44:25,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-09-27 04:44:25,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-09-27 04:44:26,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-09-27 04:44:26,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-27 04:44:27,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:27,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-09-27 04:44:28,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:28,295 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-09-27 04:44:28,295 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:44:28,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-27 04:44:28,295 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:28,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:28,303 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:44:28,307 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:44:28,308 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:44:28,313 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:44:28,318 [ scc.git] DEBUG Already up to date. 2024-09-27 04:44:28,318 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-09-27 04:44:28,639 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-09-27 04:44:28,639 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-09-27 04:44:28,644 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:44:28,644 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:28,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:28,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-27 04:44:28,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:28,661 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-09-27 04:44:28,680 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-09-27 04:44:28,681 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:28,683 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-09-27 04:44:28,683 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-09-27 04:44:28,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:28,819 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:44:28,863 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:28,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:28,869 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:44:28,912 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:44:28,919 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f183ea9d0> has no local changes 2024-09-27 04:44:28,920 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:44:28,929 [ scc.git] DEBUG [detached HEAD 28be2a9] merge master -Dorg -Ssuccess-only 2024-09-27 04:44:28,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:44:28,929 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:44:29,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-09-27 04:44:29,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-09-27 04:44:29,717 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:44:30,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-27 04:44:30,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:31,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:31,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-09-27 04:44:32,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:32,243 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-27 04:44:32,243 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:44:32,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-27 04:44:32,243 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:32,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:32,250 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:44:32,255 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:44:32,255 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:44:32,260 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:44:32,266 [ scc.git] DEBUG Already up to date. 2024-09-27 04:44:32,266 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-09-27 04:44:32,584 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-09-27 04:44:32,584 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-09-27 04:44:32,590 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:44:32,590 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:32,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:32,596 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-27 04:44:32,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:32,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-09-27 04:44:32,620 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:44:32,624 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-09-27 04:44:32,624 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-09-27 04:44:32,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:44:32,770 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:44:32,809 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:32,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:32,815 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:44:32,853 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:44:32,860 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1839ff10> has no local changes 2024-09-27 04:44:32,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:44:32,870 [ scc.git] DEBUG [detached HEAD 5fbb322] merge master -Dorg -Ssuccess-only 2024-09-27 04:44:32,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:44:32,871 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:44:33,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-09-27 04:44:33,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-09-27 04:44:34,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-09-27 04:44:34,269 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:44:34,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-27 04:44:35,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:35,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:36,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-09-27 04:44:36,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:36,789 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-27 04:44:37,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-09-27 04:44:37,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-09-27 04:44:38,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-27 04:44:38,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:39,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:39,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-09-27 04:44:40,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:40,080 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-27 04:44:40,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-09-27 04:44:40,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-09-27 04:44:40,999 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:44:41,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-27 04:44:42,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:42,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:43,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-09-27 04:44:43,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:43,442 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-27 04:44:43,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-09-27 04:44:43,905 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:44:44,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-27 04:44:44,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:45,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:46,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-09-27 04:44:46,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:46,407 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-27 04:44:46,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-09-27 04:44:47,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-09-27 04:44:47,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-27 04:44:48,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:48,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:49,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-09-27 04:44:49,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:49,626 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-27 04:44:50,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-09-27 04:44:50,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-09-27 04:44:51,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-27 04:44:51,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:52,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:44:52,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-09-27 04:44:52,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:52,900 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-09-27 04:44:53,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-09-27 04:44:53,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-09-27 04:44:54,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-27 04:44:54,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:44:55,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-09-27 04:44:55,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:44:55,646 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-09-27 04:44:55,647 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:44:55,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-27 04:44:55,647 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:44:55,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:44:55,654 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:44:55,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:44:55,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:44:55,667 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:44:55,676 [ scc.git] DEBUG Already up to date. 2024-09-27 04:44:55,677 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-09-27 04:44:56,018 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:56,018 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-09-27 04:44:56,024 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-09-27 04:44:57,571 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:57,571 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-09-27 04:44:57,578 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-09-27 04:44:58,609 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:58,610 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-09-27 04:44:58,617 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-09-27 04:44:58,926 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:58,926 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-09-27 04:44:58,933 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-09-27 04:44:59,241 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:59,241 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-09-27 04:44:59,248 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-09-27 04:44:59,760 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:44:59,760 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-09-27 04:44:59,767 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-09-27 04:45:00,057 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-09-27 04:45:00,057 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-09-27 04:45:00,062 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:00,063 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:00,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:00,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-27 04:45:00,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:00,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-09-27 04:45:00,316 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-27 04:45:00,316 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:00,320 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-09-27 04:45:00,320 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-09-27 04:45:00,320 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-09-27 04:45:00,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:00,470 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-27 04:45:00,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:00,485 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-09-27 04:45:00,607 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-09-27 04:45:00,608 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-27 04:45:00,608 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-27 04:45:00,608 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-09-27 04:45:00,608 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:00,612 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-09-27 04:45:00,612 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-09-27 04:45:00,613 [ scc.git] DEBUG src/app/header.html | 5 + 2024-09-27 04:45:00,613 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-09-27 04:45:00,613 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-09-27 04:45:00,613 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-09-27 04:45:00,613 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-09-27 04:45:00,613 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-09-27 04:45:00,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:00,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-27 04:45:00,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:00,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-09-27 04:45:00,889 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-09-27 04:45:00,890 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:00,893 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-09-27 04:45:00,893 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-09-27 04:45:00,893 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-09-27 04:45:01,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:01,246 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-27 04:45:01,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:01,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-09-27 04:45:01,276 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:01,285 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-09-27 04:45:01,286 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-09-27 04:45:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:01,637 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-27 04:45:01,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:01,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-09-27 04:45:01,817 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-27 04:45:01,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:02,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:02,019 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-27 04:45:02,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:02,033 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-09-27 04:45:02,068 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-09-27 04:45:02,069 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-09-27 04:45:02,069 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-09-27 04:45:02,069 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-09-27 04:45:02,075 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-09-27 04:45:02,075 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-09-27 04:45:02,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:02,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-27 04:45:02,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:02,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-09-27 04:45:02,460 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-27 04:45:02,461 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:02,472 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-09-27 04:45:02,472 [ scc.git] DEBUG package.json | 2 +- 2024-09-27 04:45:02,472 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-09-27 04:45:02,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:02,800 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:02,845 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:02,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:02,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:02,897 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:02,909 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f183a28e0> has no local changes 2024-09-27 04:45:02,909 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:02,924 [ scc.git] DEBUG [detached HEAD c4f6e67] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:02,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:02,925 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:03,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-09-27 04:45:03,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-09-27 04:45:04,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-09-27 04:45:04,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-27 04:45:05,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:05,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:45:06,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-09-27 04:45:06,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:06,684 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-09-27 04:45:06,685 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:06,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-27 04:45:06,685 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:06,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:06,691 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:06,696 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:06,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:06,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:06,708 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:06,709 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-09-27 04:45:07,015 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-09-27 04:45:07,015 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-09-27 04:45:07,020 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:07,021 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:07,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:07,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-27 04:45:07,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:07,042 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-09-27 04:45:07,053 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:07,056 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-09-27 04:45:07,057 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-09-27 04:45:07,057 [ scc.git] DEBUG requirements.txt | 2 +- 2024-09-27 04:45:07,057 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-09-27 04:45:07,057 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-09-27 04:45:07,057 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-09-27 04:45:07,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:07,197 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:07,239 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:07,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:07,245 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:07,286 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:07,294 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f183a2b20> has no local changes 2024-09-27 04:45:07,294 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:07,305 [ scc.git] DEBUG [detached HEAD fa15f9e] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:07,305 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:07,305 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:07,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-09-27 04:45:08,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-09-27 04:45:08,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-09-27 04:45:09,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-27 04:45:09,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:10,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-09-27 04:45:10,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:10,508 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-09-27 04:45:10,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-09-27 04:45:11,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-09-27 04:45:12,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-27 04:45:12,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:12,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-09-27 04:45:13,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:13,350 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-27 04:45:13,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-09-27 04:45:14,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-09-27 04:45:14,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-27 04:45:15,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:15,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-09-27 04:45:16,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:16,137 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-27 04:45:16,137 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:16,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-27 04:45:16,137 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:16,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:16,144 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:16,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:16,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:16,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:16,162 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:16,163 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-09-27 04:45:16,627 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-27 04:45:16,627 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-09-27 04:45:16,632 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-09-27 04:45:16,961 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-27 04:45:16,961 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-09-27 04:45:16,966 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-09-27 04:45:17,260 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-09-27 04:45:17,260 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-09-27 04:45:17,264 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:17,265 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:17,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:17,271 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-27 04:45:17,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:17,285 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-27 04:45:17,300 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-09-27 04:45:17,300 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-09-27 04:45:17,300 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-27 04:45:17,300 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-27 04:45:17,301 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:45:17,301 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:45:17,308 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-27 04:45:17,315 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-27 04:45:17,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:17,446 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-09-27 04:45:17,453 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-27 04:45:17,460 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-09-27 04:45:17,465 [ scc.config] DEBUG Found github.token 2024-09-27 04:45:17,466 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-09-27 04:45:17,466 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-27 04:45:17,474 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:17,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-27 04:45:17,834 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-09-27 04:45:17,834 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-09-27 04:45:17,834 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-09-27 04:45:17,834 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:45:17,834 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:45:17,841 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-27 04:45:17,849 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-09-27 04:45:17,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:17,993 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-09-27 04:45:18,001 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-09-27 04:45:18,007 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-09-27 04:45:18,013 [ scc.config] DEBUG Found github.token 2024-09-27 04:45:18,013 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-09-27 04:45:18,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-27 04:45:18,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:18,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-09-27 04:45:18,037 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:18,039 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-09-27 04:45:18,039 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-09-27 04:45:18,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:18,375 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:18,417 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:18,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:18,423 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:18,465 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:18,473 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18390f40> has no local changes 2024-09-27 04:45:18,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:18,483 [ scc.git] DEBUG [detached HEAD 635484c] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:18,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:18,484 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:18,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-09-27 04:45:19,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-09-27 04:45:19,389 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:45:19,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-27 04:45:20,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:20,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:45:21,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-09-27 04:45:21,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:21,874 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-27 04:45:22,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-09-27 04:45:22,358 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:45:22,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-27 04:45:23,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:23,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:45:24,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-09-27 04:45:24,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:24,817 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-27 04:45:25,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-09-27 04:45:25,266 [ scc.repo] DEBUG # ... Include label: dependencies 2024-09-27 04:45:25,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-27 04:45:26,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:26,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:45:27,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-09-27 04:45:27,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:27,612 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-27 04:45:28,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-09-27 04:45:28,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-09-27 04:45:28,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-09-27 04:45:29,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-09-27 04:45:29,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-09-27 04:45:30,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-09-27 04:45:30,424 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:30,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-27 04:45:30,425 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:30,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:30,432 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:30,438 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:30,438 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:30,446 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:30,454 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:30,454 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-09-27 04:45:30,784 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-27 04:45:30,784 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-09-27 04:45:30,790 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-09-27 04:45:31,113 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-27 04:45:31,113 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-09-27 04:45:31,118 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-09-27 04:45:31,432 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-09-27 04:45:31,432 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-09-27 04:45:31,437 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:31,437 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:31,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:31,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-27 04:45:31,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:31,455 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-09-27 04:45:31,465 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:31,469 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-09-27 04:45:31,469 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-09-27 04:45:31,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:31,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-27 04:45:31,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:31,624 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-09-27 04:45:31,834 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-27 04:45:31,834 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:31,837 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-09-27 04:45:31,838 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-09-27 04:45:32,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:32,006 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-27 04:45:32,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:32,019 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-09-27 04:45:32,029 [ scc.git] DEBUG Auto-merging package-lock.json 2024-09-27 04:45:32,030 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:32,032 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-09-27 04:45:32,033 [ scc.git] DEBUG package.json | 2 +- 2024-09-27 04:45:32,033 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-09-27 04:45:32,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:32,415 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:32,458 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:32,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:32,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:32,505 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:32,512 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1839f400> has no local changes 2024-09-27 04:45:32,512 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:32,520 [ scc.git] DEBUG [detached HEAD ff0153e] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:32,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:32,521 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:32,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-09-27 04:45:33,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-09-27 04:45:33,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-27 04:45:34,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:34,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-09-27 04:45:35,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:35,152 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-09-27 04:45:35,152 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:35,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-27 04:45:35,152 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:35,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:35,158 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:35,165 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:35,165 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:35,172 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:35,179 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:35,179 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-27 04:45:35,499 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-09-27 04:45:35,499 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-27 04:45:35,504 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:35,505 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:35,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:35,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-27 04:45:35,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:35,525 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-09-27 04:45:35,534 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:35,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:35,668 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:35,714 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:35,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:35,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:35,767 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:35,774 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18367b20> has no local changes 2024-09-27 04:45:35,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:35,785 [ scc.git] DEBUG [detached HEAD 95bb54b] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:35,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:35,786 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:36,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-09-27 04:45:36,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-09-27 04:45:37,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-09-27 04:45:37,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-09-27 04:45:37,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-27 04:45:38,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:38,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-09-27 04:45:39,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:39,258 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-27 04:45:39,258 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:39,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-27 04:45:39,258 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:39,258 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:39,265 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:39,271 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:39,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:39,278 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:39,284 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:39,285 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-09-27 04:45:39,588 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-09-27 04:45:39,588 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-09-27 04:45:39,593 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:39,593 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:39,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:39,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-27 04:45:39,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:39,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-09-27 04:45:39,672 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-09-27 04:45:39,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:39,676 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-09-27 04:45:39,676 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-09-27 04:45:39,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:39,833 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:39,895 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:39,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:39,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:39,953 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:39,962 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18352ee0> has no local changes 2024-09-27 04:45:39,962 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:39,973 [ scc.git] DEBUG [detached HEAD 17e66a9] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:39,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:39,974 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:40,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-09-27 04:45:40,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-09-27 04:45:41,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-09-27 04:45:41,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-27 04:45:42,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:42,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-09-27 04:45:43,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:43,154 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-27 04:45:43,154 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:43,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-27 04:45:43,155 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:43,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:43,163 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:43,168 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:43,169 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:43,175 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:43,182 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:43,182 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-09-27 04:45:43,671 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-09-27 04:45:43,671 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-09-27 04:45:43,676 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:43,676 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:43,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:43,683 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-27 04:45:43,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:43,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-27 04:45:43,709 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-09-27 04:45:43,709 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-09-27 04:45:43,709 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-09-27 04:45:43,709 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-09-27 04:45:43,709 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-09-27 04:45:43,709 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-09-27 04:45:43,710 [ scc.git] DEBUG Auto-merging setup.py 2024-09-27 04:45:43,710 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-09-27 04:45:43,710 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:45:43,710 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:45:43,716 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-27 04:45:43,724 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-09-27 04:45:43,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:43,857 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-09-27 04:45:43,865 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-09-27 04:45:43,873 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - setup.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-09-27 04:45:43,880 [ scc.config] DEBUG Found github.token 2024-09-27 04:45:43,880 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-09-27 04:45:43,880 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:43,922 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:43,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:43,928 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:43,970 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:43,978 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1836cbe0> has no local changes 2024-09-27 04:45:43,978 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:43,990 [ scc.git] DEBUG [detached HEAD d4bef72] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:43,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:43,991 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:44,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-09-27 04:45:44,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-09-27 04:45:45,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-09-27 04:45:45,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-27 04:45:46,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:46,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-09-27 04:45:47,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:47,073 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-27 04:45:47,073 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:47,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-27 04:45:47,073 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:47,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:47,081 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:47,087 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:47,087 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:47,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:47,101 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:47,101 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-09-27 04:45:47,446 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-09-27 04:45:47,447 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-09-27 04:45:47,452 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:47,452 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:47,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:47,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-09-27 04:45:47,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:47,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-09-27 04:45:47,492 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-09-27 04:45:47,496 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-09-27 04:45:47,499 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-09-27 04:45:47,499 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-09-27 04:45:47,500 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-09-27 04:45:47,500 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-09-27 04:45:47,501 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-09-27 04:45:47,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:47,636 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:47,678 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:47,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:47,685 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:47,734 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:47,744 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18320640> has no local changes 2024-09-27 04:45:47,744 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:47,757 [ scc.git] DEBUG [detached HEAD 2424c98] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:47,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:47,758 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:48,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-09-27 04:45:48,041 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:48,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-27 04:45:48,042 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,050 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:48,055 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:48,056 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:48,062 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:48,067 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:48,068 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:48,068 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,073 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:48,115 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:48,158 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:48,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18324070> has no local changes 2024-09-27 04:45:48,164 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:48,173 [ scc.git] DEBUG [detached HEAD 643ead6] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:48,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:48,174 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-09-27 04:45:48,516 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:48,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-27 04:45:48,516 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,523 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:48,529 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:48,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:48,536 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:48,543 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:48,543 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:48,543 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,549 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:48,599 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:48,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:48,608 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:48,650 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:48,657 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f18367d60> has no local changes 2024-09-27 04:45:48,658 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:48,666 [ scc.git] DEBUG [detached HEAD 165add9] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:48,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:48,667 [ scc.git] INFO Overriding base-branch from master to main 2024-09-27 04:45:48,667 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:49,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-09-27 04:45:49,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-09-27 04:45:49,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-09-27 04:45:50,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-09-27 04:45:50,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-27 04:45:51,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:51,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-09-27 04:45:52,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:52,215 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-27 04:45:52,216 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:52,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-27 04:45:52,216 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:52,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:52,223 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-09-27 04:45:52,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:52,229 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-09-27 04:45:52,235 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-09-27 04:45:52,242 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:52,242 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-09-27 04:45:52,598 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-09-27 04:45:52,598 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-09-27 04:45:52,603 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:52,603 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:52,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:52,609 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-27 04:45:52,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:52,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-27 04:45:52,628 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-09-27 04:45:52,628 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-09-27 04:45:52,629 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:45:52,629 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:45:52,634 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-27 04:45:52,641 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-09-27 04:45:52,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:52,776 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-09-27 04:45:52,783 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-09-27 04:45:52,788 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-09-27 04:45:52,793 [ scc.config] DEBUG Found github.token 2024-09-27 04:45:52,793 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-09-27 04:45:52,793 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:52,831 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:52,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:52,837 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:52,874 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:52,880 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f182cb910> has no local changes 2024-09-27 04:45:52,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:52,888 [ scc.git] DEBUG [detached HEAD e321d5e] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:52,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:52,889 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:53,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-09-27 04:45:53,181 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:53,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-27 04:45:53,181 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:53,192 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:53,193 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:53,199 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:53,205 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:53,205 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:53,205 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,211 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:53,255 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,262 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:53,309 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:53,317 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f1830ed60> has no local changes 2024-09-27 04:45:53,317 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:53,327 [ scc.git] DEBUG [detached HEAD 36bf839] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:53,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:53,328 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:53,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-09-27 04:45:53,604 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:53,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-27 04:45:53,604 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,611 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:53,617 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:53,618 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:53,625 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:53,631 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:53,631 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:53,632 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,639 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:53,683 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:53,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:53,689 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:53,737 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:53,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f182e8ee0> has no local changes 2024-09-27 04:45:53,746 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:53,756 [ scc.git] DEBUG [detached HEAD e8781d7] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:53,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:53,757 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:54,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-09-27 04:45:54,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-09-27 04:45:54,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-09-27 04:45:55,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-27 04:45:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:45:56,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-09-27 04:45:56,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:45:56,884 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-09-27 04:45:56,884 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:45:56,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-27 04:45:56,885 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:56,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:56,893 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-09-27 04:45:56,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:45:56,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-09-27 04:45:56,905 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-09-27 04:45:56,912 [ scc.git] DEBUG Already up to date. 2024-09-27 04:45:56,913 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-09-27 04:45:57,369 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-09-27 04:45:57,370 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-09-27 04:45:57,377 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:45:57,377 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:57,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:57,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-27 04:45:57,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:57,397 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-27 04:45:57,509 [ scc.git] DEBUG Auto-merging Dockerfile 2024-09-27 04:45:57,509 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-09-27 04:45:57,509 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:45:57,510 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:45:57,517 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-27 04:45:57,526 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-09-27 04:45:57,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:45:57,662 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-09-27 04:45:57,668 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-09-27 04:45:57,674 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-09-27 04:45:57,678 [ scc.config] DEBUG Found github.token 2024-09-27 04:45:57,679 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-09-27 04:45:57,679 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:45:57,719 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:45:57,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:45:57,725 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:45:57,764 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:45:57,770 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f182c1be0> has no local changes 2024-09-27 04:45:57,771 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:45:57,779 [ scc.git] DEBUG [detached HEAD 9d4de4d] merge master -Dorg -Ssuccess-only 2024-09-27 04:45:57,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:45:57,780 [ scc.git] INFO Overriding base-branch from master to develop 2024-09-27 04:45:57,780 [ scc.repo] DEBUG ## PRs found: 2024-09-27 04:45:58,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-09-27 04:45:58,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-09-27 04:45:59,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-27 04:45:59,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:46:00,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-09-27 04:46:00,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-09-27 04:46:00,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:46:00,988 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-27 04:46:01,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-09-27 04:46:02,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-09-27 04:46:02,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-09-27 04:46:02,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-09-27 04:46:03,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-09-27 04:46:03,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-09-27 04:46:04,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-27 04:46:04,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-09-27 04:46:05,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-09-27 04:46:05,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-09-27 04:46:05,612 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-27 04:46:06,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-09-27 04:46:06,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-09-27 04:46:06,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-09-27 04:46:07,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-09-27 04:46:07,470 [ scc.repo] DEBUG ## Branches found: 2024-09-27 04:46:07,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-27 04:46:07,471 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:46:07,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:46:07,477 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-09-27 04:46:07,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-09-27 04:46:07,482 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-09-27 04:46:07,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-09-27 04:46:07,494 [ scc.git] DEBUG Already up to date. 2024-09-27 04:46:07,494 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-09-27 04:46:07,817 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-27 04:46:07,818 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-09-27 04:46:07,823 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-09-27 04:46:08,568 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-09-27 04:46:08,569 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-09-27 04:46:08,574 [ scc.git] DEBUG ## Unique users: [] 2024-09-27 04:46:08,574 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:46:08,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:46:08,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-27 04:46:08,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:46:08,596 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-27 04:46:08,607 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-09-27 04:46:08,608 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-09-27 04:46:08,608 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-09-27 04:46:08,608 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-09-27 04:46:08,615 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-27 04:46:08,622 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-09-27 04:46:08,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:08,755 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-09-27 04:46:08,764 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-09-27 04:46:08,772 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#197](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-09-27 04:46:08,778 [ scc.config] DEBUG Found github.token 2024-09-27 04:46:08,779 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-09-27 04:46:08,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-27 04:46:08,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:46:08,792 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-09-27 04:46:08,804 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-09-27 04:46:08,807 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-09-27 04:46:08,807 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-09-27 04:46:09,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:09,139 [ scc.git] DEBUG Calling 'git submodule update' 2024-09-27 04:46:09,190 [ scc.git] DEBUG Get sha1 of %s 2024-09-27 04:46:09,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-09-27 04:46:09,197 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:46:09,242 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:46:09,250 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f182ac5b0> has no local changes 2024-09-27 04:46:09,250 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:46:09,260 [ scc.git] DEBUG [detached HEAD e17cccc] merge master -Dorg -Ssuccess-only 2024-09-27 04:46:09,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:09,261 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-09-27 04:46:09,343 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-09-27 04:46:09,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:09,545 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-09-27 04:46:09,550 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-09-27 04:46:09,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:09,936 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-09-27 04:46:09,943 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-09-27 04:46:10,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:10,321 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-09-27 04:46:10,328 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-09-27 04:46:10,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:10,710 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-09-27 04:46:11,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:11,115 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-09-27 04:46:11,124 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-09-27 04:46:11,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:11,500 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-09-27 04:46:11,507 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-09-27 04:46:11,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:11,881 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-09-27 04:46:11,887 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-09-27 04:46:12,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:12,267 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-09-27 04:46:12,273 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-09-27 04:46:12,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:12,659 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-09-27 04:46:12,666 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-09-27 04:46:13,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:13,079 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-09-27 04:46:13,087 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-09-27 04:46:13,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:13,464 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-09-27 04:46:13,470 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-09-27 04:46:13,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:13,853 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-09-27 04:46:13,859 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-09-27 04:46:14,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:14,245 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-09-27 04:46:14,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:14,632 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-09-27 04:46:14,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:15,006 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-09-27 04:46:15,011 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-09-27 04:46:15,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:15,412 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-09-27 04:46:15,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:15,792 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-09-27 04:46:16,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:16,206 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-09-27 04:46:16,213 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-09-27 04:46:16,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:16,595 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-09-27 04:46:16,601 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-09-27 04:46:16,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:16,986 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-09-27 04:46:16,995 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-09-27 04:46:17,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:17,368 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-09-27 04:46:17,377 [ scc.config] DEBUG Found submodule.scripts.url 2024-09-27 04:46:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-09-27 04:46:17,759 [ scc.config] DEBUG Found submodule.scripts.branch 2024-09-27 04:46:17,759 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-09-27 04:46:17,847 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f19708b80> has local changes 2024-09-27 04:46:17,848 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#197 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/197/)' 2024-09-27 04:46:17,863 [ scc.git] DEBUG [detached HEAD 46332ce] merge master -Dorg -Ssuccess-only 2024-09-27 04:46:17,863 [ scc.merge] INFO Repository: ome/omero-plugins 2024-09-27 04:46:17,863 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-09-27 04:46:17,863 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,863 [ scc.merge] INFO 2024-09-27 04:46:17,863 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-09-27 04:46:17,864 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-09-27 04:46:17,864 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-09-27 04:46:17,864 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-09-27 04:46:17,864 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-09-27 04:46:17,864 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-09-27 04:46:17,864 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-27 04:46:17,864 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,864 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-09-27 04:46:17,864 [ scc.merge] INFO 2024-09-27 04:46:17,864 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Repository: ome/omero-figure 2024-09-27 04:46:17,865 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-09-27 04:46:17,865 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-09-27 04:46:17,865 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Repository: ome/omero-gallery 2024-09-27 04:46:17,865 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,865 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-09-27 04:46:17,865 [ scc.merge] INFO 2024-09-27 04:46:17,865 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-09-27 04:46:17,865 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-09-27 04:46:17,866 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Repository: ome/omero-mapr 2024-09-27 04:46:17,866 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-09-27 04:46:17,866 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Repository: ome/omero-metadata 2024-09-27 04:46:17,866 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,866 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-09-27 04:46:17,866 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-09-27 04:46:17,866 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Repository: ome/omero-parade 2024-09-27 04:46:17,867 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-09-27 04:46:17,867 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-09-27 04:46:17,867 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Repository: ome/omero-rois 2024-09-27 04:46:17,867 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-09-27 04:46:17,867 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Repository: ome/omero-signup 2024-09-27 04:46:17,867 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-09-27 04:46:17,867 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,867 [ scc.merge] INFO 2024-09-27 04:46:17,867 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,867 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: ome/omero-upload 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-09-27 04:46:17,868 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-09-27 04:46:17,868 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-09-27 04:46:17,868 [ scc.merge] INFO 2024-09-27 04:46:17,868 [ scc.merge] INFO Repository: ome/scripts 2024-09-27 04:46:17,868 [ scc.merge] INFO Excluded PRs: 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-09-27 04:46:17,868 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-09-27 04:46:17,869 [ scc.merge] INFO Already up to date. 2024-09-27 04:46:17,869 [ scc.merge] INFO 2024-09-27 04:46:17,869 [ scc.merge] INFO Merged PRs: 2024-09-27 04:46:17,869 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-09-27 04:46:17,869 [ scc.merge] INFO 2024-09-27 04:46:17,869 [ scc.merge] INFO Conflicting PRs (not included): 2024-09-27 04:46:17,869 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-09-27 04:46:17,869 [ scc.merge] INFO 2024-09-27 04:46:17,869 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-09-27 04:46:17,869 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-09-27 04:46:17,875 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-09-27 04:46:17,881 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,887 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-09-27 04:46:17,887 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-09-27 04:46:17,892 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-09-27 04:46:17,900 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-09-27 04:46:17,907 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-09-27 04:46:17,914 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-09-27 04:46:17,921 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-09-27 04:46:17,929 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-09-27 04:46:17,938 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-09-27 04:46:17,945 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-09-27 04:46:17,952 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-09-27 04:46:17,958 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-09-27 04:46:17,964 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-09-27 04:46:17,983 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:17,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:17,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-09-27 04:46:17,993 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-09-27 04:46:18,001 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-09-27 04:46:18,008 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-09-27 04:46:18,014 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-09-27 04:46:18,020 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-09-27 04:46:18,028 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-09-27 04:46:18,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-09-27 04:46:18,035 [ scc.git] DEBUG Calling 'git remote' 2024-09-27 04:46:18,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD c910aae] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 8a70fe9a nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 8103ad7] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-09-27 04:47:05,110 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-09-27 04:47:13,858 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-09-27 04:47:16,162 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-27 04:47:20,657 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-09-27 04:48:00,627 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS