![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 233 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 200 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-02 01:00:01,669 [ scc.config] DEBUG Found github.token 2024-10-02 01:00:01,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-02 01:00:01,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:00:02,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:00:02,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-02 01:00:02,622 [ scc.gh] DEBUG 3324 remaining from 5000 (Reset at 01:10 2024-10-02 01:00:02,623 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:02,627 [ scc.git] DEBUG Check current status 2024-10-02 01:00:02,628 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:02,631 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-02 01:00:02,631 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:02,678 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-02 01:00:02,681 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-02 01:00:02,684 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-02 01:00:02,687 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-02 01:00:02,691 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-02 01:00:02,694 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-02 01:00:02,697 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-02 01:00:02,714 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-02 01:00:02,717 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-02 01:00:02,720 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-02 01:00:02,723 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-02 01:00:02,725 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-02 01:00:02,729 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-02 01:00:02,732 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-02 01:00:02,755 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-02 01:00:02,758 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-02 01:00:02,761 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-02 01:00:02,764 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-02 01:00:02,768 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-02 01:00:02,770 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-02 01:00:02,773 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-02 01:00:02,777 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-02 01:00:02,781 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:03,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-02 01:00:03,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:03,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:04,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:04,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:04,735 [ scc.git] DEBUG Resetting... 2024-10-02 01:00:04,735 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-02 01:00:04,744 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-02 01:00:04,744 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-02 01:00:04,850 [ scc.git] DEBUG Check current status 2024-10-02 01:00:04,850 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:04,855 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-02 01:00:04,855 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:04,906 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-02 01:00:04,908 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-02 01:00:04,911 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-02 01:00:04,914 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-02 01:00:04,918 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-02 01:00:04,920 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-02 01:00:04,923 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-02 01:00:04,926 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-02 01:00:04,928 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-02 01:00:04,931 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-02 01:00:04,933 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-02 01:00:04,936 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-02 01:00:04,939 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-02 01:00:04,942 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-02 01:00:04,945 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-02 01:00:04,948 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-02 01:00:04,950 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-02 01:00:04,952 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-02 01:00:04,955 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-02 01:00:04,957 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-02 01:00:04,960 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-02 01:00:04,963 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-02 01:00:04,964 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-02 01:00:04,965 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-02 01:00:04,965 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-02 01:00:04,965 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-02 01:00:04,965 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-02 01:00:04,965 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:00:05,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-02 01:00:05,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-10-02 01:00:05,739 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:00:05,739 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-02 01:00:05,739 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:00:05,739 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:00:05,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:00:05,744 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:00:05,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:00:05,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:00:05,751 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:00:05,756 [ scc.git] DEBUG Already up to date. 2024-10-02 01:00:05,756 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-10-02 01:00:06,082 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-02 01:00:06,082 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-10-02 01:00:06,087 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:00:06,088 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:00:06,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:00:06,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-10-02 01:00:06,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:00:06,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-10-02 01:00:06,165 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:00:06,167 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-02 01:00:06,167 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-02 01:00:06,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:00:06,330 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:00:06,404 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-10-02 01:00:06,405 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:00:06,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:00:06,409 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:00:07,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f484ebe7b80> has no local changes 2024-10-02 01:00:07,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:00:07,662 [ scc.git] DEBUG [detached HEAD 2f7f217] merge master -Dorg -Snone 2024-10-02 01:00:07,662 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-02 01:00:07,662 [ scc.merge] INFO Already up to date. 2024-10-02 01:00:07,662 [ scc.merge] INFO 2024-10-02 01:00:07,662 [ scc.merge] INFO Merged PRs: 2024-10-02 01:00:07,662 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-02 01:00:07,662 [ scc.merge] INFO 2024-10-02 01:00:07,662 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-02 01:00:07,663 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-02 01:00:15,602 [ scc.config] DEBUG Found github.token 2024-10-02 01:00:15,604 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-02 01:00:15,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:00:16,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:00:16,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-02 01:00:16,545 [ scc.gh] DEBUG 3314 remaining from 5000 (Reset at 01:10 2024-10-02 01:00:16,545 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:16,550 [ scc.git] DEBUG Check current status 2024-10-02 01:00:16,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:16,554 [ scc.git] DEBUG 2f7f217 merge master -Dorg -Snone 2024-10-02 01:00:16,554 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:16,601 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-02 01:00:16,604 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-02 01:00:16,607 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-02 01:00:16,610 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-02 01:00:18,888 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-10-02 01:00:18,891 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-02 01:00:18,894 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-02 01:00:18,897 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-02 01:00:18,900 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-02 01:00:18,903 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-02 01:00:18,906 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-02 01:00:18,908 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-02 01:00:18,911 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-02 01:00:18,914 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-02 01:00:18,917 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-02 01:00:18,920 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-02 01:00:18,923 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-02 01:00:18,926 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-02 01:00:18,929 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-02 01:00:18,931 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-02 01:00:18,934 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-02 01:00:18,937 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-02 01:00:18,941 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:18,942 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-02 01:00:18,944 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-02 01:00:19,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-02 01:00:19,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:20,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:20,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:20,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:20,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:20,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-02 01:00:20,923 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:20,927 [ scc.git] DEBUG Check current status 2024-10-02 01:00:20,927 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:20,930 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-02 01:00:20,930 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:20,969 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:21,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-02 01:00:21,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:22,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:22,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:22,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:23,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:23,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-02 01:00:23,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:23,038 [ scc.git] DEBUG Check current status 2024-10-02 01:00:23,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:23,042 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-02 01:00:23,043 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:23,089 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:23,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-02 01:00:23,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:24,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:24,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:25,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:25,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:25,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:25,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-02 01:00:25,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:25,181 [ scc.git] DEBUG Check current status 2024-10-02 01:00:25,181 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:25,185 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-02 01:00:25,185 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:25,227 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:25,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-02 01:00:26,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:26,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:26,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:27,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:27,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:27,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:27,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-02 01:00:27,390 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:27,394 [ scc.git] DEBUG Check current status 2024-10-02 01:00:27,394 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:27,398 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-02 01:00:27,398 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:27,440 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:27,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-02 01:00:28,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:28,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:29,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:29,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:29,518 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:29,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:29,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-02 01:00:29,558 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:29,563 [ scc.git] DEBUG Check current status 2024-10-02 01:00:29,563 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:29,569 [ scc.git] DEBUG 8a70fe9a Merge pull request #588 from ome/dependabot/npm_and_yarn/dompurify-2.5.4 2024-10-02 01:00:29,569 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:29,610 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:30,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-02 01:00:30,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:30,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:31,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:31,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:31,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:31,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:31,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-02 01:00:31,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:31,706 [ scc.git] DEBUG Check current status 2024-10-02 01:00:31,706 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:31,709 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-02 01:00:31,709 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:31,748 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:32,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-02 01:00:32,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:33,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:33,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:33,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:33,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:33,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:33,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-02 01:00:33,882 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:33,887 [ scc.git] DEBUG Check current status 2024-10-02 01:00:33,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:33,891 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-02 01:00:33,891 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:33,929 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:34,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-02 01:00:34,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:35,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:35,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:35,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:35,982 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:36,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:36,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-02 01:00:36,021 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:36,025 [ scc.git] DEBUG Check current status 2024-10-02 01:00:36,025 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:36,029 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-02 01:00:36,029 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:36,077 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-02 01:00:36,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:37,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:37,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:38,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:38,123 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:38,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:38,163 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-02 01:00:38,163 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:38,168 [ scc.git] DEBUG Check current status 2024-10-02 01:00:38,168 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:38,173 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-02 01:00:38,173 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:38,217 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:38,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-02 01:00:39,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:39,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:39,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:40,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:40,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:40,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:40,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-02 01:00:40,265 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:40,269 [ scc.git] DEBUG Check current status 2024-10-02 01:00:40,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:40,274 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-02 01:00:40,275 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:40,318 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:40,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-02 01:00:41,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:41,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:41,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:42,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:42,392 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:42,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:42,431 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-02 01:00:42,431 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:42,436 [ scc.git] DEBUG Check current status 2024-10-02 01:00:42,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:42,441 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-02 01:00:42,442 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:42,484 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:42,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-02 01:00:43,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:43,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:44,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:44,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:44,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:44,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:44,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-02 01:00:44,540 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:44,545 [ scc.git] DEBUG Check current status 2024-10-02 01:00:44,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:44,549 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-02 01:00:44,550 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:44,592 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:45,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-02 01:00:45,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:45,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:46,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:46,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:46,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:46,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:46,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-02 01:00:46,756 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:46,761 [ scc.git] DEBUG Check current status 2024-10-02 01:00:46,761 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:46,765 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-02 01:00:46,765 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:46,808 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:47,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-02 01:00:47,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:48,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:48,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:48,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:48,880 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:48,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:48,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-02 01:00:48,918 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:48,923 [ scc.git] DEBUG Check current status 2024-10-02 01:00:48,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:48,927 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-02 01:00:48,927 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:48,969 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:49,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-02 01:00:49,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:50,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:50,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:51,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:51,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:51,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:51,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-02 01:00:51,169 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:51,173 [ scc.git] DEBUG Check current status 2024-10-02 01:00:51,173 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:51,177 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-02 01:00:51,177 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:51,215 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:51,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-02 01:00:51,529 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-02 01:00:51,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-02 01:00:52,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:52,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:53,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:53,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:53,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:53,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:53,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-02 01:00:53,487 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:53,492 [ scc.git] DEBUG Check current status 2024-10-02 01:00:53,492 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:53,496 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-02 01:00:53,496 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:53,537 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:53,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-02 01:00:54,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:54,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:55,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:55,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:55,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:55,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:55,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-02 01:00:55,614 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:55,619 [ scc.git] DEBUG Check current status 2024-10-02 01:00:55,619 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:55,624 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-02 01:00:55,624 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:55,666 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:56,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-02 01:00:56,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:56,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:57,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:57,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:57,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:57,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:57,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-02 01:00:57,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:57,767 [ scc.git] DEBUG Check current status 2024-10-02 01:00:57,767 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:57,772 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-02 01:00:57,772 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:57,817 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:00:57,818 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-02 01:00:58,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-02 01:00:58,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:00:59,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:00:59,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:00:59,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:00:59,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:00:59,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:00:59,852 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-02 01:00:59,852 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:00:59,857 [ scc.git] DEBUG Check current status 2024-10-02 01:00:59,857 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:00:59,862 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-02 01:00:59,862 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:00:59,903 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:01:00,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-02 01:01:00,215 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-02 01:01:00,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-02 01:01:00,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:01:01,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:01:01,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:01:02,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:01:02,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:02,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:02,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-02 01:01:02,144 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:01:02,148 [ scc.git] DEBUG Check current status 2024-10-02 01:01:02,149 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:01:02,153 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-02 01:01:02,153 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:01:02,192 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:01:02,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-02 01:01:02,501 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-02 01:01:02,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-02 01:01:03,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:01:03,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:01:04,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:01:04,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:01:04,404 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:04,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:04,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-02 01:01:04,443 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:01:04,449 [ scc.git] DEBUG Check current status 2024-10-02 01:01:04,449 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:01:04,453 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-02 01:01:04,454 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:01:04,495 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:01:04,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-02 01:01:05,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:01:05,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:01:06,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:01:06,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:01:06,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:06,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:06,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-02 01:01:06,578 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-02 01:01:06,583 [ scc.git] DEBUG Check current status 2024-10-02 01:01:06,583 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:01:06,588 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-02 01:01:06,588 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:01:06,630 [ scc.config] DEBUG Found remote.origin.url 2024-10-02 01:01:06,631 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-02 01:01:06,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-02 01:01:06,947 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-02 01:01:07,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-02 01:01:07,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-02 01:01:08,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-02 01:01:08,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-02 01:01:08,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-02 01:01:08,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:08,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:08,963 [ scc.git] DEBUG Resetting... 2024-10-02 01:01:08,963 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-02 01:01:08,973 [ scc.git] DEBUG HEAD is now at 2f7f217 merge master -Dorg -Snone 2024-10-02 01:01:08,974 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-02 01:01:09,070 [ scc.git] DEBUG Check current status 2024-10-02 01:01:09,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-02 01:01:09,076 [ scc.git] DEBUG 2f7f217 merge master -Dorg -Snone 2024-10-02 01:01:09,077 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-02 01:01:09,123 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-02 01:01:09,126 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-02 01:01:09,129 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-02 01:01:09,131 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-02 01:01:09,141 [ scc.git] DEBUG 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 omero-figure (v7.1.0-27-g8a70fe9a) 2024-10-02 01:01:09,143 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-02 01:01:09,146 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-02 01:01:09,149 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-02 01:01:09,152 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-02 01:01:09,155 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-02 01:01:09,157 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-02 01:01:09,160 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-02 01:01:09,163 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-02 01:01:09,166 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-02 01:01:09,169 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-02 01:01:09,172 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-02 01:01:09,174 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-02 01:01:09,177 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-02 01:01:09,179 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-02 01:01:09,182 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-02 01:01:09,184 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-02 01:01:09,188 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-02 01:01:09,189 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-02 01:01:09,189 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-02 01:01:09,189 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-02 01:01:09,189 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-02 01:01:09,189 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-02 01:01:09,189 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-02 01:01:09,189 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:09,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-02 01:01:09,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/391 HTTP/1.1" 200 None 2024-10-02 01:01:09,886 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:01:10,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-10-02 01:01:10,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:11,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7936c8fae005c71325227cff2777148cf7af1def HTTP/1.1" 200 None 2024-10-02 01:01:11,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/7936c8fae005c71325227cff2777148cf7af1def?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:11,783 [ scc.repo] DEBUG - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-02 01:01:11,783 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:01:11,783 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:11,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:11,788 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:01:11,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:01:11,793 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:01:11,797 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:01:11,802 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:11,802 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-10-02 01:01:12,128 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-02 01:01:12,128 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-10-02 01:01:12,133 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:01:12,134 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:12,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:12,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7936c8fae005c71325227cff2777148cf7af1def' 2024-10-02 01:01:12,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:12,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Bump omero-figure from `5f62399` to `8a70fe9`) 7936c8fae005c71325227cff2777148cf7af1def' 2024-10-02 01:01:12,153 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:12,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:12,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:01:12,342 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:12,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:12,348 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:12,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-02 01:01:13,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-02 01:01:13,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-02 01:01:14,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:14,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:15,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-02 01:01:15,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:15,570 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-02 01:01:15,570 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:01:15,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-02 01:01:15,570 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:15,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:15,576 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:01:15,581 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:01:15,581 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:01:15,586 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:01:15,592 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:15,592 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-02 01:01:16,255 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-02 01:01:16,256 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-02 01:01:16,262 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:01:16,262 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:16,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:16,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-02 01:01:16,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:16,281 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-02 01:01:16,297 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:01:16,299 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-02 01:01:16,299 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-02 01:01:16,299 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-02 01:01:16,299 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-02 01:01:16,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:16,428 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:01:16,464 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:16,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:16,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:16,504 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:01:16,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a88a7e50> has no local changes 2024-10-02 01:01:16,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:01:16,517 [ scc.git] DEBUG [detached HEAD c6433ff] merge master -Dorg -Ssuccess-only 2024-10-02 01:01:16,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:16,518 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:16,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-02 01:01:17,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-02 01:01:17,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-02 01:01:18,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-02 01:01:18,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:19,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:19,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-02 01:01:20,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:20,301 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-02 01:01:20,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-02 01:01:21,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-02 01:01:21,194 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:01:21,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-02 01:01:21,194 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:21,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:21,200 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:01:21,204 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:01:21,204 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:01:21,208 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:01:21,213 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:21,214 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-02 01:01:21,542 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-02 01:01:21,542 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-02 01:01:21,546 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:01:21,546 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:21,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:21,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-02 01:01:21,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:21,563 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-02 01:01:21,574 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:01:21,576 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-02 01:01:21,576 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-02 01:01:21,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:21,807 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:01:21,847 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:21,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:21,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:21,890 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:01:21,897 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a6adbe20> has no local changes 2024-10-02 01:01:21,897 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:01:21,906 [ scc.git] DEBUG [detached HEAD 87855a8] merge master -Dorg -Ssuccess-only 2024-10-02 01:01:21,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:21,906 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:22,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-02 01:01:22,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-02 01:01:23,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-02 01:01:23,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-02 01:01:24,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-02 01:01:24,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-02 01:01:25,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:25,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-02 01:01:26,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:26,212 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-02 01:01:26,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-02 01:01:27,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-02 01:01:27,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-02 01:01:28,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-02 01:01:28,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-02 01:01:28,508 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:01:28,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-02 01:01:28,509 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:28,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:28,514 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:01:28,518 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:01:28,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:01:28,523 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:01:28,528 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:28,528 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-02 01:01:29,035 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-02 01:01:29,035 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-02 01:01:29,040 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:01:29,040 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:29,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:29,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-02 01:01:29,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:29,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-02 01:01:29,087 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-02 01:01:29,087 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:01:29,090 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-02 01:01:29,090 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-02 01:01:29,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:29,234 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:01:29,270 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:29,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:29,275 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:29,310 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:01:29,316 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a6afe220> has no local changes 2024-10-02 01:01:29,316 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:01:29,323 [ scc.git] DEBUG [detached HEAD d1e037f] merge master -Dorg -Ssuccess-only 2024-10-02 01:01:29,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:29,323 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:29,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-02 01:01:30,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-02 01:01:30,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-02 01:01:31,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-02 01:01:31,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-02 01:01:32,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:32,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:33,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-02 01:01:33,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:34,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-02 01:01:34,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-02 01:01:34,443 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-02 01:01:34,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-02 01:01:35,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-02 01:01:35,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-02 01:01:36,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-02 01:01:36,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:37,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-02 01:01:37,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:37,860 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-02 01:01:38,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-02 01:01:38,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-02 01:01:39,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-02 01:01:39,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:40,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-02 01:01:40,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:40,563 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-02 01:01:40,563 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:01:40,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-02 01:01:40,563 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:40,563 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:40,569 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:01:40,574 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:01:40,574 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:01:40,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:01:40,584 [ scc.git] DEBUG Already up to date. 2024-10-02 01:01:40,584 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-02 01:01:41,021 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-02 01:01:41,021 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-02 01:01:41,026 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-02 01:01:41,435 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-02 01:01:41,435 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-02 01:01:41,440 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-02 01:01:42,058 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-02 01:01:42,058 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-02 01:01:42,063 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:01:42,063 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:42,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:42,069 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-02 01:01:42,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:42,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-02 01:01:42,169 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-02 01:01:42,169 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-02 01:01:42,169 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-02 01:01:42,169 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:01:42,169 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:01:42,176 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-02 01:01:42,182 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-02 01:01:42,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:42,324 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-02 01:01:42,332 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-02 01:01:42,337 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-02 01:01:42,342 [ scc.config] DEBUG Found github.token 2024-10-02 01:01:42,342 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-02 01:01:42,342 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-02 01:01:42,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:42,354 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-02 01:01:42,397 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-02 01:01:42,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-02 01:01:42,397 [ scc.git] DEBUG Auto-merging setup.py 2024-10-02 01:01:42,397 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-02 01:01:42,397 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-02 01:01:42,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-02 01:01:42,397 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-02 01:01:42,397 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:01:42,397 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:01:42,404 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-02 01:01:42,410 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-02 01:01:42,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:42,716 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-02 01:01:42,723 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-02 01:01:42,729 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-10-02 01:01:42,734 [ scc.config] DEBUG Found github.token 2024-10-02 01:01:42,734 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-02 01:01:42,734 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-02 01:01:42,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:42,746 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-02 01:01:42,757 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-02 01:01:42,757 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-02 01:01:42,758 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:01:42,760 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-02 01:01:42,761 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-02 01:01:42,761 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-02 01:01:42,761 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-02 01:01:42,761 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-02 01:01:42,761 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-02 01:01:43,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:01:43,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:01:43,136 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:01:43,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:01:43,142 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:01:43,180 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:01:43,188 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a6b05880> has no local changes 2024-10-02 01:01:43,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:01:43,196 [ scc.git] DEBUG [detached HEAD 1ae69b5] merge master -Dorg -Ssuccess-only 2024-10-02 01:01:43,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:01:43,197 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:01:43,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-02 01:01:44,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-02 01:01:44,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-02 01:01:45,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-02 01:01:45,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-02 01:01:46,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:46,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:46,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-02 01:01:47,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:47,385 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-02 01:01:47,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-02 01:01:48,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-02 01:01:48,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589 HTTP/1.1" 200 None 2024-10-02 01:01:49,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/589/comments HTTP/1.1" 200 None 2024-10-02 01:01:49,220 [ scc.repo] DEBUG # ... Include label: include 2024-10-02 01:01:49,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3 HTTP/1.1" 200 None 2024-10-02 01:01:50,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:50,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:51,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6da129ed3ae0059e388a081561402565d455c6a3 HTTP/1.1" 200 None 2024-10-02 01:01:51,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6da129ed3ae0059e388a081561402565d455c6a3?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:51,531 [ scc.repo] DEBUG - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-10-02 01:01:51,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/587 HTTP/1.1" 200 None 2024-10-02 01:01:52,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-10-02 01:01:52,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:53,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:53,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ea8f8e2cd52811def9584dc64139b846d5724742 HTTP/1.1" 200 None 2024-10-02 01:01:54,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ea8f8e2cd52811def9584dc64139b846d5724742?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:54,261 [ scc.repo] DEBUG - PR 587 will-moore 'Update licenses.txt' 2024-10-02 01:01:54,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-02 01:01:55,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-02 01:01:55,307 [ scc.repo] DEBUG # ... Include label: include 2024-10-02 01:01:55,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c HTTP/1.1" 200 None 2024-10-02 01:01:56,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:01:56,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:01:57,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5fa2b263036669b5e5bdf240a95127ecb8aea83c HTTP/1.1" 200 None 2024-10-02 01:01:57,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5fa2b263036669b5e5bdf240a95127ecb8aea83c?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:01:57,739 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-02 01:01:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583 HTTP/1.1" 200 None 2024-10-02 01:01:58,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/583/comments HTTP/1.1" 200 None 2024-10-02 01:01:58,634 [ scc.repo] DEBUG # ... Include label: include 2024-10-02 01:01:59,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-10-02 01:01:59,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:00,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:00,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/767908ccac79aaeebd261b698f6f56d5bd95beb4 HTTP/1.1" 200 None 2024-10-02 01:02:00,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/767908ccac79aaeebd261b698f6f56d5bd95beb4?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:00,921 [ scc.repo] DEBUG - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-10-02 01:02:01,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-10-02 01:02:01,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579/comments HTTP/1.1" 200 None 2024-10-02 01:02:02,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-02 01:02:02,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-02 01:02:02,817 [ scc.repo] DEBUG # ... Include label: include 2024-10-02 01:02:03,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-02 01:02:03,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:04,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:04,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-02 01:02:05,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b59d9ee6c7ca24182d05a069fe1db887459bf63f?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:05,215 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-02 01:02:05,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-02 01:02:06,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-02 01:02:06,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-02 01:02:06,886 [ scc.repo] DEBUG # ... Include label: include 2024-10-02 01:02:07,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-02 01:02:07,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:08,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:08,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-02 01:02:09,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15353812686b3ac466fc705d017bd8b9a8b25aab?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:09,187 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-02 01:02:09,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568 HTTP/1.1" 200 None 2024-10-02 01:02:10,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/568/comments HTTP/1.1" 200 None 2024-10-02 01:02:10,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-10-02 01:02:11,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:11,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:12,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6 HTTP/1.1" 200 None 2024-10-02 01:02:12,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:12,423 [ scc.repo] DEBUG - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-10-02 01:02:12,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-10-02 01:02:13,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-10-02 01:02:13,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-10-02 01:02:14,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:14,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:15,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41b3686e00f764da75b8ad9697f20488a5163b9d HTTP/1.1" 200 None 2024-10-02 01:02:15,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41b3686e00f764da75b8ad9697f20488a5163b9d?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:15,724 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-10-02 01:02:15,725 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:02:15,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-02 01:02:15,725 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:15,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:15,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:02:15,737 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:02:15,737 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:02:15,743 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:02:15,749 [ scc.git] DEBUG Already up to date. 2024-10-02 01:02:15,749 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-10-02 01:02:16,871 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:16,871 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-10-02 01:02:16,876 [ scc.git] DEBUG Calling 'git fetch origin pull/568/head' 2024-10-02 01:02:17,358 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:17,358 [ scc.git] DEBUG * branch refs/pull/568/head -> FETCH_HEAD 2024-10-02 01:02:17,363 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-02 01:02:18,321 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:18,322 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-02 01:02:18,324 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-02 01:02:18,807 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:18,808 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-02 01:02:18,811 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-10-02 01:02:20,792 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:20,792 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-10-02 01:02:20,798 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-02 01:02:21,394 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:21,394 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-02 01:02:21,397 [ scc.git] DEBUG Calling 'git fetch origin pull/587/head' 2024-10-02 01:02:21,743 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:21,743 [ scc.git] DEBUG * branch refs/pull/587/head -> FETCH_HEAD 2024-10-02 01:02:21,749 [ scc.git] DEBUG Calling 'git fetch origin pull/589/head' 2024-10-02 01:02:22,940 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:22,940 [ scc.git] DEBUG * branch refs/pull/589/head -> FETCH_HEAD 2024-10-02 01:02:22,946 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-02 01:02:23,377 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-02 01:02:23,377 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-02 01:02:23,382 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:02:23,382 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:23,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:23,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-10-02 01:02:23,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:23,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 41b3686e00f764da75b8ad9697f20488a5163b9d' 2024-10-02 01:02:23,928 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-02 01:02:23,928 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-02 01:02:23,928 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-02 01:02:23,928 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-10-02 01:02:23,928 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-02 01:02:23,928 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:23,935 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 4 +- 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/shape_editor/point.js | 477 +++++++++++++++++++++ 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 11 +- 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-10-02 01:02:23,935 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-10-02 01:02:23,935 [ scc.git] DEBUG 11 files changed, 510 insertions(+), 9 deletions(-) 2024-10-02 01:02:23,935 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-10-02 01:02:23,935 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/point.js 2024-10-02 01:02:24,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:24,070 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-10-02 01:02:24,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:24,084 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 15b99b2d9f05bf5bbf62ef90a05cc48fdb5fdef6' 2024-10-02 01:02:24,101 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:24,104 [ scc.git] DEBUG setup.py | 2 +- 2024-10-02 01:02:24,104 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-02 01:02:24,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:24,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-02 01:02:24,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:24,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-02 01:02:24,622 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-02 01:02:24,623 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-02 01:02:24,623 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-02 01:02:24,623 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-10-02 01:02:24,623 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-02 01:02:24,623 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-10-02 01:02:24,623 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:02:24,623 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:02:24,631 [ scc.git] DEBUG Calling 'git reset --hard be3c1f2b9bf087e2ab8eae3088aa0443b3900e92' 2024-10-02 01:02:24,640 [ scc.git] DEBUG HEAD is now at be3c1f2b merge master -Dorg -Ssuccess-only: PR 568 (Remove numpy from tests_require in setup.py) 2024-10-02 01:02:24,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:24,846 [ scc.git] DEBUG Calling 'git merge-base 8a70fe9af1be66b86f098e153c6baa65a2fc5d72 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-02 01:02:24,854 [ scc.git] DEBUG Calling 'git diff --name-only 8a70fe9af1be66b86f098e153c6baa65a2fc5d72..8a70fe9af1be66b86f098e153c6baa65a2fc5d72' 2024-10-02 01:02:24,860 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - PR #555 will-moore 'Points in shape editor' - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-10-02 01:02:24,864 [ scc.config] DEBUG Found github.token 2024-10-02 01:02:24,864 [ scc.git] DEBUG Adding comment to issue #577. 2024-10-02 01:02:25,648 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 2024 2024-10-02 01:02:25,649 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-02 01:02:25,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:25,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-02 01:02:26,065 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-02 01:02:26,066 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-02 01:02:26,066 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-02 01:02:26,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:26,075 [ scc.git] DEBUG .gitignore | 2 + 2024-10-02 01:02:26,075 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-10-02 01:02:26,075 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-02 01:02:26,075 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-10-02 01:02:26,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:26,215 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-10-02 01:02:26,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:26,233 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Add Hilo Checkbox for LUT Toggling in Channel Slider View) 767908ccac79aaeebd261b698f6f56d5bd95beb4' 2024-10-02 01:02:26,412 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-02 01:02:26,413 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:26,418 [ scc.git] DEBUG src/js/models/panel_model.js | 25 ++++++++++++++--- 2024-10-02 01:02:26,418 [ scc.git] DEBUG src/js/models/undo.js | 3 +- 2024-10-02 01:02:26,419 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 53 ++++++++++++++++++++++++++++++++++-- 2024-10-02 01:02:26,419 [ scc.git] DEBUG src/templates/checkbox_template.html | 4 +++ 2024-10-02 01:02:26,419 [ scc.git] DEBUG 4 files changed, 77 insertions(+), 8 deletions(-) 2024-10-02 01:02:26,419 [ scc.git] DEBUG create mode 100644 src/templates/checkbox_template.html 2024-10-02 01:02:26,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:26,595 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5fa2b263036669b5e5bdf240a95127ecb8aea83c' 2024-10-02 01:02:26,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:26,611 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 5fa2b263036669b5e5bdf240a95127ecb8aea83c' 2024-10-02 01:02:26,713 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:26,718 [ scc.git] DEBUG omero_figure/views.py | 130 ++++++++++++++++++++++++++++++++++++------ 2024-10-02 01:02:26,718 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-02 01:02:26,718 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-02 01:02:26,718 [ scc.git] DEBUG 3 files changed, 124 insertions(+), 26 deletions(-) 2024-10-02 01:02:26,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:26,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ea8f8e2cd52811def9584dc64139b846d5724742' 2024-10-02 01:02:26,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:26,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 587 (Update licenses.txt) ea8f8e2cd52811def9584dc64139b846d5724742' 2024-10-02 01:02:27,028 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:27,032 [ scc.git] DEBUG licenses.txt | 30 +++++++++++++++++++----------- 2024-10-02 01:02:27,032 [ scc.git] DEBUG 1 file changed, 19 insertions(+), 11 deletions(-) 2024-10-02 01:02:27,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:27,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6da129ed3ae0059e388a081561402565d455c6a3' 2024-10-02 01:02:27,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:27,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 589 (implemented get_timestamps() from timeIncrement attribute) 6da129ed3ae0059e388a081561402565d455c6a3' 2024-10-02 01:02:27,403 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:27,407 [ scc.git] DEBUG omero_figure/omeroutils.py | 37 ++++++++++++++++++++++++++++++------- 2024-10-02 01:02:27,407 [ scc.git] DEBUG 1 file changed, 30 insertions(+), 7 deletions(-) 2024-10-02 01:02:27,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:27,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-02 01:02:27,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:27,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-02 01:02:27,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:27,795 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-02 01:02:27,795 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-02 01:02:28,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:28,146 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:02:28,185 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:28,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:28,193 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:02:28,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:02:28,255 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a6aea880> has no local changes 2024-10-02 01:02:28,256 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:02:28,272 [ scc.git] DEBUG [detached HEAD 7d6be370] merge master -Dorg -Ssuccess-only 2024-10-02 01:02:28,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:02:28,272 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:02:28,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-02 01:02:29,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-02 01:02:29,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-02 01:02:30,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-02 01:02:30,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:31,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-02 01:02:31,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:31,478 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-02 01:02:31,478 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:02:31,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-02 01:02:31,479 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:31,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:31,484 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:02:31,489 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:02:31,489 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:02:31,495 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:02:31,501 [ scc.git] DEBUG Already up to date. 2024-10-02 01:02:31,501 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-02 01:02:31,908 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-02 01:02:31,909 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-02 01:02:31,913 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:02:31,913 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:31,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:31,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-02 01:02:31,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:31,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-02 01:02:31,943 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-02 01:02:31,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:31,946 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-02 01:02:31,946 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-02 01:02:32,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:32,083 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:02:32,124 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:32,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:32,130 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:02:32,169 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:02:32,176 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a6aca9d0> has no local changes 2024-10-02 01:02:32,176 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:02:32,186 [ scc.git] DEBUG [detached HEAD a572b5e] merge master -Dorg -Ssuccess-only 2024-10-02 01:02:32,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:02:32,187 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:02:32,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-02 01:02:33,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-02 01:02:33,006 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:02:33,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-02 01:02:34,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:34,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:35,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-02 01:02:35,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:35,606 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-02 01:02:35,606 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:02:35,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-02 01:02:35,606 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:35,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:35,612 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:02:35,616 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:02:35,617 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:02:35,622 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:02:35,627 [ scc.git] DEBUG Already up to date. 2024-10-02 01:02:35,627 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-02 01:02:35,925 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-02 01:02:35,925 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-02 01:02:35,929 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:02:35,929 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:35,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:35,935 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-02 01:02:35,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:35,946 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-02 01:02:35,958 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:02:35,962 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-02 01:02:35,962 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-02 01:02:36,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:02:36,104 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:02:36,143 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:36,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:36,150 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:02:36,187 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:02:36,195 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a5a7bf10> has no local changes 2024-10-02 01:02:36,195 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:02:36,204 [ scc.git] DEBUG [detached HEAD 2d6a975] merge master -Dorg -Ssuccess-only 2024-10-02 01:02:36,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:02:36,205 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:02:36,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-02 01:02:37,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-02 01:02:37,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-02 01:02:37,539 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:02:38,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-02 01:02:38,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:39,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:39,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-02 01:02:40,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:40,046 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-02 01:02:40,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-02 01:02:40,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-02 01:02:41,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-02 01:02:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:42,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:42,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-02 01:02:43,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:43,289 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-02 01:02:43,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-10-02 01:02:44,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-02 01:02:44,173 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:02:44,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-02 01:02:45,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:45,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:46,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-02 01:02:46,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:46,740 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-02 01:02:47,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-02 01:02:47,190 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:02:47,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-02 01:02:48,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:48,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:49,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-02 01:02:49,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:49,569 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-02 01:02:50,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-02 01:02:50,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-02 01:02:50,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-02 01:02:51,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:51,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:52,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-02 01:02:52,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:52,815 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-02 01:02:53,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-02 01:02:53,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-02 01:02:54,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-02 01:02:54,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:55,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:02:55,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-02 01:02:56,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:56,170 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-02 01:02:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-02 01:02:57,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-02 01:02:57,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-02 01:02:58,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:02:58,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-02 01:02:59,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:02:59,219 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-02 01:02:59,220 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:02:59,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-02 01:02:59,220 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:02:59,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:02:59,227 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:02:59,232 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:02:59,232 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:02:59,395 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:02:59,402 [ scc.git] DEBUG Already up to date. 2024-10-02 01:02:59,402 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-02 01:03:00,220 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:00,220 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-02 01:03:00,225 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-02 01:03:01,530 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:01,530 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-02 01:03:01,535 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-02 01:03:02,083 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:02,084 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-02 01:03:02,089 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-02 01:03:02,370 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:02,370 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-02 01:03:02,374 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-02 01:03:02,652 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:02,653 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-02 01:03:02,657 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-02 01:03:03,137 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:03,138 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-02 01:03:03,143 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-02 01:03:03,435 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-02 01:03:03,435 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-02 01:03:03,441 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:03,441 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:03,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:03,449 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-02 01:03:03,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:03,470 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-02 01:03:03,636 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-02 01:03:03,638 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:03,642 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-02 01:03:03,643 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-02 01:03:03,643 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-02 01:03:03,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:03,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-02 01:03:03,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:03,790 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-02 01:03:04,008 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-02 01:03:04,008 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-02 01:03:04,008 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-02 01:03:04,008 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-02 01:03:04,008 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:04,012 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-02 01:03:04,013 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-02 01:03:04,013 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-02 01:03:04,013 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-02 01:03:04,013 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-02 01:03:04,013 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-02 01:03:04,013 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-02 01:03:04,013 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-02 01:03:04,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:04,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-02 01:03:04,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:04,185 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-02 01:03:04,246 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-02 01:03:04,246 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:04,250 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-02 01:03:04,250 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-02 01:03:04,250 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-02 01:03:04,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:04,555 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-02 01:03:04,623 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:04,631 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-02 01:03:04,730 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:04,744 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-02 01:03:04,744 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-02 01:03:04,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:04,946 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-02 01:03:05,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:05,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-02 01:03:05,134 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-02 01:03:05,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:05,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:05,336 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-02 01:03:05,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:05,349 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-02 01:03:05,478 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-02 01:03:05,478 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-02 01:03:05,479 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-02 01:03:05,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:05,483 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-02 01:03:05,483 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-02 01:03:05,484 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-02 01:03:05,484 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-02 01:03:05,484 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-02 01:03:05,484 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-02 01:03:05,484 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-02 01:03:05,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:05,732 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-02 01:03:05,795 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:05,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-02 01:03:05,907 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-02 01:03:05,908 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:05,918 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-02 01:03:05,919 [ scc.git] DEBUG package.json | 2 +- 2024-10-02 01:03:05,919 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-02 01:03:06,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:06,119 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:06,167 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:06,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:06,173 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:06,214 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:06,231 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a5a7e8e0> has no local changes 2024-10-02 01:03:06,232 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:06,242 [ scc.git] DEBUG [detached HEAD e79c2ff] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:06,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:06,243 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:06,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-02 01:03:07,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-02 01:03:07,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-02 01:03:08,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-02 01:03:08,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:09,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:03:09,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-02 01:03:09,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:09,996 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-02 01:03:09,996 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:09,997 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-02 01:03:09,997 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:09,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:10,002 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:10,007 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:10,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:10,013 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:10,019 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:10,020 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-02 01:03:10,355 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-02 01:03:10,355 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-02 01:03:10,360 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:10,360 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:10,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:10,365 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-02 01:03:10,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:10,376 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-02 01:03:10,385 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:10,388 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-02 01:03:10,388 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-02 01:03:10,388 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-02 01:03:10,388 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-02 01:03:10,388 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-02 01:03:10,388 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-02 01:03:10,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:10,528 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:10,570 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:10,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:10,577 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:10,618 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:10,625 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a5a7eb20> has no local changes 2024-10-02 01:03:10,625 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:10,634 [ scc.git] DEBUG [detached HEAD 3665613] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:10,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:10,634 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:11,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-02 01:03:11,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-02 01:03:12,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-02 01:03:12,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-02 01:03:12,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:13,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-02 01:03:13,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:13,769 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-02 01:03:14,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-02 01:03:14,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-02 01:03:15,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-02 01:03:15,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:16,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-02 01:03:16,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:16,521 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-02 01:03:16,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-02 01:03:17,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-02 01:03:17,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-02 01:03:18,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:18,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-02 01:03:19,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:19,249 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-02 01:03:19,249 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:19,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-02 01:03:19,250 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:19,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:19,258 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:19,264 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:19,265 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:19,271 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:19,280 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:19,280 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-02 01:03:20,022 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-02 01:03:20,022 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-02 01:03:20,029 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-02 01:03:20,638 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-02 01:03:20,639 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-02 01:03:20,644 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-02 01:03:20,935 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-02 01:03:20,935 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-02 01:03:20,941 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:20,941 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:20,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:20,949 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-02 01:03:20,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:20,962 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-02 01:03:20,988 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-02 01:03:20,988 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-02 01:03:20,988 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-02 01:03:20,988 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-02 01:03:20,989 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:03:20,989 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:03:20,997 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-02 01:03:21,005 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-02 01:03:21,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:21,148 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-02 01:03:21,157 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-02 01:03:21,165 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-10-02 01:03:21,172 [ scc.config] DEBUG Found github.token 2024-10-02 01:03:21,172 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-02 01:03:21,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-02 01:03:21,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:21,187 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-02 01:03:21,205 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-02 01:03:21,205 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-02 01:03:21,205 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-02 01:03:21,205 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:03:21,206 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:03:21,213 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-02 01:03:21,224 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-02 01:03:21,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:21,532 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-02 01:03:21,539 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-02 01:03:21,546 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-02 01:03:21,552 [ scc.config] DEBUG Found github.token 2024-10-02 01:03:21,552 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-02 01:03:21,552 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-02 01:03:21,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:21,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-02 01:03:21,573 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:21,576 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-02 01:03:21,576 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-02 01:03:21,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:21,925 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:21,967 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:21,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:21,974 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:22,014 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:22,022 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a5a6df40> has no local changes 2024-10-02 01:03:22,022 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:22,032 [ scc.git] DEBUG [detached HEAD 5c2d550] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:22,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:22,032 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:22,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-02 01:03:22,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-02 01:03:22,958 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:03:23,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-02 01:03:24,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:24,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:03:25,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-02 01:03:25,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:25,469 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-02 01:03:25,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-02 01:03:25,960 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:03:26,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-02 01:03:27,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:27,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:03:27,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-02 01:03:28,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:28,376 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-02 01:03:28,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-02 01:03:28,840 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-02 01:03:29,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-02 01:03:29,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:30,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:03:30,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-02 01:03:31,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:31,291 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-02 01:03:31,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-02 01:03:32,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-02 01:03:32,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-02 01:03:33,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-02 01:03:33,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-02 01:03:34,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-02 01:03:34,121 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:34,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-02 01:03:34,121 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:34,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:34,128 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:34,134 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:34,134 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:34,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:34,147 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:34,147 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-02 01:03:34,488 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-02 01:03:34,489 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-02 01:03:34,494 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-02 01:03:34,788 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-02 01:03:34,788 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-02 01:03:34,792 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-02 01:03:35,077 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-02 01:03:35,078 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-02 01:03:35,082 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:35,082 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:35,082 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:35,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-02 01:03:35,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:35,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-02 01:03:35,109 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:35,112 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-02 01:03:35,112 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-02 01:03:35,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:35,246 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-02 01:03:35,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:35,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-02 01:03:35,329 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-02 01:03:35,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:35,333 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-02 01:03:35,333 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-02 01:03:35,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:35,625 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-02 01:03:35,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:35,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-02 01:03:35,650 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-02 01:03:35,650 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:35,653 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-02 01:03:35,653 [ scc.git] DEBUG package.json | 2 +- 2024-10-02 01:03:35,653 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-02 01:03:36,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:36,007 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:36,047 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:36,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:36,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:36,091 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:36,098 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a5a7b400> has no local changes 2024-10-02 01:03:36,098 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:36,106 [ scc.git] DEBUG [detached HEAD 363e216] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:36,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:36,107 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:36,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-02 01:03:36,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-02 01:03:37,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-02 01:03:37,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:38,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-02 01:03:38,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:38,965 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-02 01:03:38,965 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:38,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-02 01:03:38,965 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:38,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:38,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:38,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:38,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:38,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:38,992 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:38,992 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-02 01:03:39,318 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-02 01:03:39,318 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-02 01:03:39,323 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:39,323 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:39,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:39,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-02 01:03:39,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:39,341 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-02 01:03:39,352 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:39,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:39,486 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:39,539 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:39,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:39,545 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:39,587 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:39,595 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a4242b20> has no local changes 2024-10-02 01:03:39,595 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:39,605 [ scc.git] DEBUG [detached HEAD 81ea39c] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:39,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:39,606 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:40,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-02 01:03:40,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-02 01:03:40,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-02 01:03:41,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-02 01:03:41,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-02 01:03:42,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:42,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-02 01:03:43,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:43,143 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-02 01:03:43,143 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:43,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-02 01:03:43,144 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:43,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:43,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:43,156 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:43,156 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:43,161 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:43,166 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:43,166 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-02 01:03:43,495 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-02 01:03:43,495 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-02 01:03:43,500 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:43,500 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:43,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:43,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-02 01:03:43,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:43,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-02 01:03:43,531 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-02 01:03:43,531 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:43,534 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-02 01:03:43,534 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-02 01:03:43,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:43,666 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:43,706 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:43,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:43,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:43,746 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:43,753 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a4213ee0> has no local changes 2024-10-02 01:03:43,753 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:43,761 [ scc.git] DEBUG [detached HEAD 4b7afd2] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:43,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:43,761 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:44,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-02 01:03:44,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-02 01:03:45,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-02 01:03:45,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-02 01:03:46,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:46,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-02 01:03:47,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:47,021 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-02 01:03:47,021 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:47,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-02 01:03:47,022 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:47,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:47,028 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:47,034 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:47,034 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:47,040 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:47,046 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:47,047 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-02 01:03:47,377 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-02 01:03:47,377 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-02 01:03:47,382 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:47,382 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:47,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:47,387 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-02 01:03:47,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:47,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-02 01:03:47,428 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG Auto-merging setup.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-02 01:03:47,428 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:03:47,428 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:03:47,434 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-02 01:03:47,441 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-02 01:03:47,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:47,576 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-02 01:03:47,583 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-02 01:03:47,590 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2024-10-02 01:03:47,595 [ scc.config] DEBUG Found github.token 2024-10-02 01:03:47,596 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-02 01:03:47,596 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:47,637 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:47,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:47,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:47,690 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:47,697 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a4245be0> has no local changes 2024-10-02 01:03:47,697 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:47,707 [ scc.git] DEBUG [detached HEAD 68e7b7f] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:47,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:47,708 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:48,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-02 01:03:48,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-02 01:03:48,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-02 01:03:49,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-02 01:03:49,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:50,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-02 01:03:50,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:50,722 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-02 01:03:50,722 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:50,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-02 01:03:50,722 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:50,723 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:50,728 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:50,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:50,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:50,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:50,743 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:50,743 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-02 01:03:51,110 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-02 01:03:51,110 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-02 01:03:51,115 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:51,115 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:51,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,121 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-02 01:03:51,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-02 01:03:51,146 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:03:51,149 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-02 01:03:51,149 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-02 01:03:51,150 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-02 01:03:51,152 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-02 01:03:51,152 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-02 01:03:51,153 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-02 01:03:51,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:51,287 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:51,331 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:51,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,336 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:51,373 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:51,380 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41f9640> has no local changes 2024-10-02 01:03:51,380 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:51,389 [ scc.git] DEBUG [detached HEAD 86d8914] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:51,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:51,389 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:51,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-02 01:03:51,709 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:51,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-02 01:03:51,709 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:51,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,717 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:51,722 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:51,722 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:51,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:51,731 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:51,732 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:51,732 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:51,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,737 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:51,778 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:51,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:51,784 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:51,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:51,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a4200520> has no local changes 2024-10-02 01:03:51,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:51,838 [ scc.git] DEBUG [detached HEAD 7f34000] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:51,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:51,839 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-02 01:03:52,112 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:52,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-02 01:03:52,112 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:52,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:52,118 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:52,122 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:52,122 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:52,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:52,133 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:52,133 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:52,134 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:52,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:52,138 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:52,181 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:52,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:52,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:52,227 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:52,234 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a4242d60> has no local changes 2024-10-02 01:03:52,234 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:52,242 [ scc.git] DEBUG [detached HEAD a7a924c] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:52,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:52,243 [ scc.git] INFO Overriding base-branch from master to main 2024-10-02 01:03:52,243 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:52,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-02 01:03:53,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-02 01:03:53,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-02 01:03:53,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-02 01:03:54,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-02 01:03:54,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:03:55,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-02 01:03:55,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:03:55,932 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-02 01:03:55,932 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:55,932 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-02 01:03:55,932 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:55,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:55,939 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-02 01:03:55,944 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:55,944 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-02 01:03:55,948 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-02 01:03:55,954 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:55,955 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-02 01:03:56,467 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-02 01:03:56,467 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-02 01:03:56,472 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:56,472 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:56,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:56,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-02 01:03:56,484 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:56,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-02 01:03:56,523 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-02 01:03:56,523 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-02 01:03:56,523 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:03:56,524 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:03:56,529 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-02 01:03:56,535 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-02 01:03:56,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:03:56,674 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-02 01:03:56,681 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-02 01:03:56,687 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-02 01:03:56,692 [ scc.config] DEBUG Found github.token 2024-10-02 01:03:56,693 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-02 01:03:56,693 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:56,732 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:56,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:56,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:56,778 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:56,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41a4910> has no local changes 2024-10-02 01:03:56,786 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:56,795 [ scc.git] DEBUG [detached HEAD 8aec139] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:56,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:56,796 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:57,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-02 01:03:57,086 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:57,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-02 01:03:57,086 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,093 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:57,099 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:57,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:57,104 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:57,110 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:57,111 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:57,111 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,117 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:57,159 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:57,207 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:57,214 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41cbd60> has no local changes 2024-10-02 01:03:57,215 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:57,224 [ scc.git] DEBUG [detached HEAD d9bd851] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:57,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:57,225 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:57,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-02 01:03:57,503 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:03:57,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-02 01:03:57,503 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,510 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:03:57,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:03:57,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:03:57,523 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:03:57,530 [ scc.git] DEBUG Already up to date. 2024-10-02 01:03:57,530 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:03:57,530 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,537 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:03:57,580 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:03:57,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:03:57,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:03:57,628 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:03:57,636 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41c7ee0> has no local changes 2024-10-02 01:03:57,636 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:03:57,648 [ scc.git] DEBUG [detached HEAD 0063692] merge master -Dorg -Ssuccess-only 2024-10-02 01:03:57,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:03:57,648 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:03:57,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-02 01:03:58,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-02 01:03:58,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-02 01:03:59,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-02 01:03:59,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:04:00,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-02 01:04:00,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:04:00,782 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-02 01:04:00,782 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:04:00,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-02 01:04:00,782 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:00,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:00,791 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-02 01:04:00,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:04:00,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-02 01:04:00,803 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-02 01:04:00,808 [ scc.git] DEBUG Already up to date. 2024-10-02 01:04:00,809 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-02 01:04:01,321 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-02 01:04:01,321 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-02 01:04:01,326 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:04:01,326 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:01,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:01,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-02 01:04:01,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:01,348 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-02 01:04:01,365 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-02 01:04:01,365 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-02 01:04:01,365 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:04:01,366 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:04:01,372 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-02 01:04:01,381 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-02 01:04:01,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:01,519 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-02 01:04:01,526 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-02 01:04:01,532 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-02 01:04:01,538 [ scc.config] DEBUG Found github.token 2024-10-02 01:04:01,539 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-02 01:04:01,539 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:04:01,586 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:01,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:01,593 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:04:01,636 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:04:01,645 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41c2f10> has no local changes 2024-10-02 01:04:01,645 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:04:01,655 [ scc.git] DEBUG [detached HEAD 4e9ced7] merge master -Dorg -Ssuccess-only 2024-10-02 01:04:01,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:01,656 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-02 01:04:01,656 [ scc.repo] DEBUG ## PRs found: 2024-10-02 01:04:02,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-02 01:04:02,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-02 01:04:03,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-02 01:04:03,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:04:03,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-02 01:04:04,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-02 01:04:04,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:04:04,793 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-02 01:04:05,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-02 01:04:05,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-02 01:04:06,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-02 01:04:06,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-02 01:04:07,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-02 01:04:07,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-02 01:04:08,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-02 01:04:08,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-02 01:04:09,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-02 01:04:09,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-02 01:04:09,486 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-02 01:04:09,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-02 01:04:10,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-02 01:04:10,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-02 01:04:11,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-02 01:04:11,413 [ scc.repo] DEBUG ## Branches found: 2024-10-02 01:04:11,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-02 01:04:11,413 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:11,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:11,419 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-02 01:04:11,425 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-02 01:04:11,425 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-02 01:04:11,431 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-02 01:04:11,437 [ scc.git] DEBUG Already up to date. 2024-10-02 01:04:11,437 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-02 01:04:11,987 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-02 01:04:11,987 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-02 01:04:11,992 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-02 01:04:12,584 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-02 01:04:12,584 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-02 01:04:12,589 [ scc.git] DEBUG ## Unique users: [] 2024-10-02 01:04:12,589 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:12,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:12,595 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-02 01:04:12,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:12,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-02 01:04:12,720 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-02 01:04:12,720 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-02 01:04:12,720 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-02 01:04:12,721 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-02 01:04:12,727 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-02 01:04:12,733 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-02 01:04:12,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:12,883 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-02 01:04:12,891 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-02 01:04:12,896 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#199](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-02 01:04:12,900 [ scc.config] DEBUG Found github.token 2024-10-02 01:04:12,900 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-02 01:04:12,900 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-02 01:04:12,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:12,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-02 01:04:12,918 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-02 01:04:12,921 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-02 01:04:12,921 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-02 01:04:13,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:13,282 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-02 01:04:13,318 [ scc.git] DEBUG Get sha1 of %s 2024-10-02 01:04:13,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-02 01:04:13,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:04:13,359 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:04:13,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a41845b0> has no local changes 2024-10-02 01:04:13,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:04:13,375 [ scc.git] DEBUG [detached HEAD a6e490d] merge master -Dorg -Ssuccess-only 2024-10-02 01:04:13,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:13,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-02 01:04:13,452 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-02 01:04:13,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:13,676 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-02 01:04:13,680 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-02 01:04:14,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:14,060 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-02 01:04:14,064 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-02 01:04:14,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:14,443 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-02 01:04:14,448 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-02 01:04:14,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:14,826 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-02 01:04:15,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:15,211 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-02 01:04:15,216 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-02 01:04:15,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:15,602 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-02 01:04:15,607 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-02 01:04:15,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:15,981 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-02 01:04:15,985 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-02 01:04:16,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:16,368 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-02 01:04:16,373 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-02 01:04:16,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:16,776 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-02 01:04:16,781 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-02 01:04:17,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:17,162 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-02 01:04:17,167 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-02 01:04:17,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:17,547 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-02 01:04:17,551 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-02 01:04:17,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:17,928 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-02 01:04:17,932 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-02 01:04:18,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:18,323 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-02 01:04:18,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:18,745 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-02 01:04:19,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:19,130 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-02 01:04:19,134 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-02 01:04:19,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:19,522 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-02 01:04:19,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:19,915 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-02 01:04:20,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:20,293 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-02 01:04:20,299 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-02 01:04:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:20,687 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-02 01:04:20,691 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-02 01:04:21,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:21,066 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-02 01:04:21,071 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-02 01:04:21,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:21,451 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-02 01:04:21,456 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-02 01:04:21,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-02 01:04:21,836 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-02 01:04:21,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-02 01:04:21,908 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd8a7de7b80> has local changes 2024-10-02 01:04:21,909 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 555 will-moore 'Points in shape editor' - PR 568 will-moore 'Remove numpy from tests_require in setup.py' - PR 578 Rdornier 'Image outline' - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' - PR 584 Rdornier 'Link url to image' - PR 587 will-moore 'Update licenses.txt' - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' - PR 592 will-moore 'Filter owners and groups dropdown lists' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#199 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/199/)' 2024-10-02 01:04:21,923 [ scc.git] DEBUG [detached HEAD 8425393] merge master -Dorg -Ssuccess-only 2024-10-02 01:04:21,923 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-02 01:04:21,923 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-02 01:04:21,923 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 391 dependabot[bot] 'Bump omero-figure from `5f62399` to `8a70fe9`' 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-02 01:04:21,924 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-02 01:04:21,924 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-02 01:04:21,924 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-02 01:04:21,924 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-02 01:04:21,924 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,924 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-02 01:04:21,924 [ scc.merge] INFO 2024-10-02 01:04:21,924 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-02 01:04:21,924 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-02 01:04:21,925 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-02 01:04:21,925 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' (user: Rdornier) 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-02 01:04:21,925 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 568 will-moore 'Remove numpy from tests_require in setup.py' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 583 MinaEnayat 'Add Hilo Checkbox for LUT Toggling in Channel Slider View' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 589 JensWendt 'implemented get_timestamps() from timeIncrement attribute' 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-02 01:04:21,925 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,925 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,925 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-02 01:04:21,925 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-02 01:04:21,926 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-02 01:04:21,926 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' (user: barrettMCW) 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-02 01:04:21,926 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-02 01:04:21,926 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-02 01:04:21,926 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-02 01:04:21,926 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,926 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-02 01:04:21,926 [ scc.merge] INFO 2024-10-02 01:04:21,926 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-02 01:04:21,927 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-02 01:04:21,927 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-02 01:04:21,927 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-02 01:04:21,927 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-02 01:04:21,927 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-02 01:04:21,927 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,927 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,927 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-02 01:04:21,927 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,927 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-02 01:04:21,928 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-02 01:04:21,928 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-02 01:04:21,928 [ scc.merge] INFO 2024-10-02 01:04:21,928 [ scc.merge] INFO Repository: ome/scripts 2024-10-02 01:04:21,928 [ scc.merge] INFO Excluded PRs: 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-02 01:04:21,928 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-02 01:04:21,929 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-02 01:04:21,929 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-02 01:04:21,929 [ scc.merge] INFO Already up to date. 2024-10-02 01:04:21,929 [ scc.merge] INFO 2024-10-02 01:04:21,929 [ scc.merge] INFO Merged PRs: 2024-10-02 01:04:21,929 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-02 01:04:21,929 [ scc.merge] INFO 2024-10-02 01:04:21,929 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-02 01:04:21,929 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-02 01:04:21,929 [ scc.merge] INFO 2024-10-02 01:04:21,929 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-02 01:04:21,929 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-02 01:04:21,936 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-02 01:04:21,942 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-02 01:04:21,947 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-02 01:04:21,953 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-02 01:04:21,960 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-02 01:04:21,965 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-02 01:04:21,969 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-02 01:04:21,974 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-02 01:04:21,981 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-02 01:04:21,988 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:21,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:21,995 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-02 01:04:21,995 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-02 01:04:22,001 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-02 01:04:22,008 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-02 01:04:22,014 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-02 01:04:22,020 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-02 01:04:22,026 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-02 01:04:22,044 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-02 01:04:22,050 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-02 01:04:22,056 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-02 01:04:22,062 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-02 01:04:22,067 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-02 01:04:22,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-02 01:04:22,072 [ scc.git] DEBUG Calling 'git remote' 2024-10-02 01:04:22,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD ecc0c6a] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 8a70fe9a nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 278519e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-02 01:05:06,938 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-02 01:05:15,752 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-02 01:05:18,083 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-02 01:05:22,574 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-02 01:06:03,141 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS