![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 237 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Commit message: "Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399" > git rev-list --no-walk b41cfa91c1b22a62bc7ea8b5fa7259ef8d5d7b79 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 204 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-43.0.1-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.3.2 cryptography-43.0.1 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-06 00:40:37,506 [ scc.config] DEBUG Found github.token 2024-10-06 00:40:37,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-06 00:40:37,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:40:38,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:40:38,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-06 00:40:38,458 [ scc.gh] DEBUG 4015 remaining from 5000 (Reset at 00:10 2024-10-06 00:40:38,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:40:38,463 [ scc.git] DEBUG Check current status 2024-10-06 00:40:38,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:38,467 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-06 00:40:38,467 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:38,516 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-06 00:40:38,518 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-06 00:40:38,522 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-06 00:40:38,551 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-06 00:40:38,556 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-06 00:40:38,559 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-06 00:40:38,561 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-06 00:40:38,631 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-06 00:40:38,634 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-06 00:40:38,637 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-06 00:40:38,641 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-06 00:40:38,644 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-06 00:40:38,647 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-06 00:40:38,649 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-06 00:40:38,661 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-06 00:40:38,664 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-06 00:40:38,666 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-06 00:40:38,669 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-06 00:40:38,672 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-06 00:40:38,674 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-06 00:40:38,677 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-06 00:40:38,680 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-06 00:40:38,686 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:40:38,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-06 00:40:39,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:40:39,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:40:40,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:40:40,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:40:40,520 [ scc.git] DEBUG Resetting... 2024-10-06 00:40:40,520 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-06 00:40:40,531 [ scc.git] DEBUG HEAD is now at b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-06 00:40:40,531 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-06 00:40:40,636 [ scc.git] DEBUG Check current status 2024-10-06 00:40:40,637 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:40,641 [ scc.git] DEBUG b41cfa9 Merge pull request #389 from ome/dependabot/submodules/omero-figure-5f62399 2024-10-06 00:40:40,641 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:40,691 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-06 00:40:40,694 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-06 00:40:40,697 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-06 00:40:40,700 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-06 00:40:40,704 [ scc.git] DEBUG 5f623996a1906632e0ff91ce399a733d139a59d7 omero-figure (v7.1.0-1-g5f623996) 2024-10-06 00:40:40,707 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-06 00:40:40,710 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-06 00:40:40,715 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-06 00:40:40,718 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-06 00:40:40,721 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-06 00:40:40,724 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-06 00:40:40,727 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-06 00:40:40,730 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-06 00:40:40,733 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-06 00:40:40,736 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-06 00:40:40,739 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-06 00:40:40,742 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-06 00:40:40,745 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-06 00:40:40,748 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-06 00:40:40,751 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-06 00:40:40,754 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-06 00:40:40,757 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-06 00:40:40,758 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-06 00:40:40,758 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-06 00:40:40,758 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-06 00:40:40,758 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-06 00:40:40,758 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-06 00:40:40,759 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:40:41,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-06 00:40:41,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/392 HTTP/1.1" 200 None 2024-10-06 00:40:41,451 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:40:41,451 [ scc.repo] DEBUG - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-06 00:40:41,451 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:40:41,451 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:40:41,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:40:41,456 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:40:41,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:40:41,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:40:41,466 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:40:41,471 [ scc.git] DEBUG Already up to date. 2024-10-06 00:40:41,471 [ scc.git] DEBUG Calling 'git fetch origin pull/392/head' 2024-10-06 00:40:41,766 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-06 00:40:41,766 [ scc.git] DEBUG * branch refs/pull/392/head -> FETCH_HEAD 2024-10-06 00:40:41,772 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:40:41,772 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:40:41,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:40:41,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-06 00:40:41,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:40:41,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 392 (Bump omero-figure from `5f62399` to `33d8d26`) 134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-06 00:40:41,810 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:40:41,813 [ scc.git] DEBUG omero-figure | 2 +- 2024-10-06 00:40:41,813 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-10-06 00:40:41,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:40:41,954 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:40:42,042 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '33d8d26c5b42901b05cb57ccee670749c70e6f42' 2024-10-06 00:40:42,043 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:40:42,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:40:42,047 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:40:42,951 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8890bf30a0> has no local changes 2024-10-06 00:40:42,951 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:40:43,029 [ scc.git] DEBUG [detached HEAD ab7b4eb] merge master -Dorg -Snone 2024-10-06 00:40:43,030 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-06 00:40:43,030 [ scc.merge] INFO Already up to date. 2024-10-06 00:40:43,030 [ scc.merge] INFO 2024-10-06 00:40:43,030 [ scc.merge] INFO Merged PRs: 2024-10-06 00:40:43,030 [ scc.merge] INFO - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-06 00:40:43,030 [ scc.merge] INFO 2024-10-06 00:40:43,030 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-06 00:40:43,030 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-figure': checked out '1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-06 00:40:50,565 [ scc.config] DEBUG Found github.token 2024-10-06 00:40:50,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-06 00:40:50,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:40:51,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:40:51,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-06 00:40:51,501 [ scc.gh] DEBUG 4005 remaining from 5000 (Reset at 00:10 2024-10-06 00:40:51,502 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:40:51,506 [ scc.git] DEBUG Check current status 2024-10-06 00:40:51,506 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:51,510 [ scc.git] DEBUG ab7b4eb merge master -Dorg -Snone 2024-10-06 00:40:51,510 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:51,560 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-06 00:40:51,563 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-06 00:40:51,566 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-06 00:40:51,570 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-06 00:40:52,577 [ scc.git] DEBUG +1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 omero-figure (v7.1.0-65-g1c0e5f95) 2024-10-06 00:40:52,580 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-06 00:40:52,583 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-06 00:40:52,586 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-06 00:40:52,589 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-06 00:40:52,593 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-06 00:40:52,601 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-06 00:40:52,604 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-06 00:40:52,607 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-06 00:40:52,611 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-06 00:40:52,614 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-06 00:40:52,617 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-06 00:40:52,619 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-06 00:40:52,621 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-06 00:40:52,624 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-06 00:40:52,626 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-06 00:40:52,629 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-06 00:40:52,632 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-06 00:40:52,637 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:40:52,637 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-06 00:40:52,639 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-06 00:40:52,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-06 00:40:53,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:40:53,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:40:54,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:40:54,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:40:54,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:40:54,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-06 00:40:54,674 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:40:54,678 [ scc.git] DEBUG Check current status 2024-10-06 00:40:54,678 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:54,683 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-06 00:40:54,683 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:54,727 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:40:55,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-06 00:40:55,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:40:56,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:40:56,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:40:56,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:40:56,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:40:56,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:40:56,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-06 00:40:56,985 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:40:56,989 [ scc.git] DEBUG Check current status 2024-10-06 00:40:56,989 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:56,993 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-06 00:40:56,993 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:57,038 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:40:57,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-06 00:40:57,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:40:58,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:40:58,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:40:59,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:40:59,081 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:40:59,125 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:40:59,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-06 00:40:59,126 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:40:59,131 [ scc.git] DEBUG Check current status 2024-10-06 00:40:59,131 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:40:59,135 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-06 00:40:59,135 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:40:59,177 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:40:59,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-06 00:41:00,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:00,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:00,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:01,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:01,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:01,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:01,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-06 00:41:01,386 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:01,390 [ scc.git] DEBUG Check current status 2024-10-06 00:41:01,391 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:01,395 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-06 00:41:01,395 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:01,440 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:01,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-06 00:41:02,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:02,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:03,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:03,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:03,460 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:03,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:03,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-06 00:41:03,500 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:03,505 [ scc.git] DEBUG Check current status 2024-10-06 00:41:03,505 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:03,590 [ scc.git] DEBUG 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-06 00:41:03,590 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:03,639 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:03,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-06 00:41:04,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:04,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:05,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:05,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:05,644 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:05,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:05,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-06 00:41:05,688 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:05,693 [ scc.git] DEBUG Check current status 2024-10-06 00:41:05,693 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:05,697 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-06 00:41:05,697 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:05,742 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:06,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-06 00:41:06,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:06,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:07,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:07,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:07,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:07,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:07,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-06 00:41:07,806 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:07,811 [ scc.git] DEBUG Check current status 2024-10-06 00:41:07,811 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:07,815 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-06 00:41:07,815 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:07,861 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:08,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-06 00:41:08,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:09,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:09,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:09,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:09,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:09,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:09,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-06 00:41:09,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:09,950 [ scc.git] DEBUG Check current status 2024-10-06 00:41:09,950 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:09,954 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-06 00:41:09,954 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:10,001 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:10,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-06 00:41:10,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:11,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:11,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:12,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:12,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:12,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:12,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-06 00:41:12,177 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:12,182 [ scc.git] DEBUG Check current status 2024-10-06 00:41:12,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:12,186 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-06 00:41:12,186 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:12,227 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:12,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-06 00:41:13,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:13,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:13,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:14,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:14,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:14,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:14,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-06 00:41:14,299 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:14,304 [ scc.git] DEBUG Check current status 2024-10-06 00:41:14,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:14,311 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-06 00:41:14,311 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:14,360 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:14,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-06 00:41:15,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:15,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:15,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:16,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:16,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:16,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:16,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-06 00:41:16,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:16,396 [ scc.git] DEBUG Check current status 2024-10-06 00:41:16,397 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:16,401 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-06 00:41:16,401 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:16,447 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:16,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-06 00:41:17,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:17,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:18,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:18,448 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:18,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:18,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-06 00:41:18,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:18,496 [ scc.git] DEBUG Check current status 2024-10-06 00:41:18,496 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:18,500 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-06 00:41:18,501 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:18,545 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:18,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-06 00:41:19,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:19,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:20,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:20,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:20,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:20,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:20,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-06 00:41:20,678 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:20,682 [ scc.git] DEBUG Check current status 2024-10-06 00:41:20,683 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:20,687 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-06 00:41:20,687 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:20,734 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:21,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-06 00:41:21,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:21,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:22,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:22,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:22,788 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:22,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:22,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-06 00:41:22,832 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:22,838 [ scc.git] DEBUG Check current status 2024-10-06 00:41:22,838 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:22,843 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-06 00:41:22,843 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:22,889 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:23,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-06 00:41:23,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:24,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:24,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:24,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:24,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:24,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:24,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-06 00:41:24,988 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:24,993 [ scc.git] DEBUG Check current status 2024-10-06 00:41:24,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:24,999 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-06 00:41:24,999 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:25,050 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:25,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-06 00:41:25,328 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-06 00:41:25,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-06 00:41:25,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:26,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:26,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:27,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:27,167 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:27,210 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:27,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-06 00:41:27,211 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:27,216 [ scc.git] DEBUG Check current status 2024-10-06 00:41:27,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:27,222 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-06 00:41:27,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:27,271 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:27,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-06 00:41:28,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:28,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:28,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:29,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:29,296 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:29,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:29,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-06 00:41:29,338 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:29,343 [ scc.git] DEBUG Check current status 2024-10-06 00:41:29,343 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:29,348 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-06 00:41:29,348 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:29,397 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:29,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-06 00:41:30,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:30,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:31,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:31,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:31,493 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:31,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:31,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-06 00:41:31,536 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:31,541 [ scc.git] DEBUG Check current status 2024-10-06 00:41:31,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:31,546 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-06 00:41:31,546 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:31,593 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:31,594 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-06 00:41:31,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-06 00:41:32,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:32,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:33,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:33,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:33,583 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:33,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:33,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-06 00:41:33,627 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:33,633 [ scc.git] DEBUG Check current status 2024-10-06 00:41:33,633 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:33,639 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-06 00:41:33,639 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:33,686 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:33,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-06 00:41:33,988 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-06 00:41:34,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-06 00:41:34,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:35,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:35,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:35,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:35,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:35,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:35,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-06 00:41:35,970 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:35,975 [ scc.git] DEBUG Check current status 2024-10-06 00:41:35,975 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:35,980 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-06 00:41:35,980 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:36,025 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:36,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-06 00:41:36,323 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-06 00:41:36,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-06 00:41:37,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:37,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:37,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:38,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:38,214 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:38,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:38,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-06 00:41:38,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:38,271 [ scc.git] DEBUG Check current status 2024-10-06 00:41:38,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:38,282 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-06 00:41:38,283 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:38,339 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:38,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-06 00:41:39,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:39,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:40,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:40,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:40,461 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:40,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:40,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-06 00:41:40,508 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-06 00:41:40,514 [ scc.git] DEBUG Check current status 2024-10-06 00:41:40,514 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:40,543 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-06 00:41:40,544 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:40,591 [ scc.config] DEBUG Found remote.origin.url 2024-10-06 00:41:40,592 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-06 00:41:40,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-06 00:41:40,865 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-06 00:41:41,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-06 00:41:41,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-06 00:41:41,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-06 00:41:42,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-06 00:41:42,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-06 00:41:42,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:42,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:42,788 [ scc.git] DEBUG Resetting... 2024-10-06 00:41:42,788 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-06 00:41:42,799 [ scc.git] DEBUG HEAD is now at ab7b4eb merge master -Dorg -Snone 2024-10-06 00:41:42,800 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-06 00:41:42,869 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '33d8d26c5b42901b05cb57ccee670749c70e6f42' 2024-10-06 00:41:42,921 [ scc.git] DEBUG Check current status 2024-10-06 00:41:42,921 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-06 00:41:42,927 [ scc.git] DEBUG ab7b4eb merge master -Dorg -Snone 2024-10-06 00:41:42,927 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-06 00:41:42,978 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-06 00:41:42,981 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-06 00:41:42,984 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-06 00:41:42,987 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-06 00:41:42,996 [ scc.git] DEBUG 33d8d26c5b42901b05cb57ccee670749c70e6f42 omero-figure (v7.1.0-51-g33d8d26c) 2024-10-06 00:41:42,999 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-06 00:41:43,002 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-06 00:41:43,005 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-06 00:41:43,008 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-06 00:41:43,011 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-06 00:41:43,014 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-06 00:41:43,016 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-06 00:41:43,019 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-06 00:41:43,022 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-06 00:41:43,025 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-06 00:41:43,027 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-06 00:41:43,030 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-06 00:41:43,032 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-06 00:41:43,035 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-06 00:41:43,038 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-06 00:41:43,041 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-06 00:41:43,045 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-06 00:41:43,046 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-06 00:41:43,046 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-06 00:41:43,046 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-06 00:41:43,046 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-06 00:41:43,046 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-06 00:41:43,046 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-06 00:41:43,046 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:41:43,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-10-06 00:41:43,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/392 HTTP/1.1" 200 None 2024-10-06 00:41:43,747 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:41:44,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56 HTTP/1.1" 200 None 2024-10-06 00:41:44,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:41:45,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/134661acaf644b7c74ebfc09584bb3dcd8bb5a56 HTTP/1.1" 200 None 2024-10-06 00:41:45,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/134661acaf644b7c74ebfc09584bb3dcd8bb5a56?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:41:45,636 [ scc.repo] DEBUG - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-06 00:41:45,636 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:41:45,637 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:45,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:45,642 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:41:45,647 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:41:45,648 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:41:45,653 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:41:45,660 [ scc.git] DEBUG Already up to date. 2024-10-06 00:41:45,660 [ scc.git] DEBUG Calling 'git fetch origin pull/392/head' 2024-10-06 00:41:45,988 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-10-06 00:41:45,988 [ scc.git] DEBUG * branch refs/pull/392/head -> FETCH_HEAD 2024-10-06 00:41:45,993 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:41:45,994 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:45,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:46,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-06 00:41:46,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:46,012 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 392 (Bump omero-figure from `5f62399` to `33d8d26`) 134661acaf644b7c74ebfc09584bb3dcd8bb5a56' 2024-10-06 00:41:46,018 [ scc.git] DEBUG Already up to date. 2024-10-06 00:41:46,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:41:46,152 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:41:46,208 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:46,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:46,214 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:41:46,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-06 00:41:47,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-06 00:41:47,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-06 00:41:47,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:41:48,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:41:48,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-06 00:41:49,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:41:49,254 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-06 00:41:49,254 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:41:49,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-06 00:41:49,254 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:49,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:49,260 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:41:49,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:41:49,266 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:41:49,272 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:41:49,278 [ scc.git] DEBUG Already up to date. 2024-10-06 00:41:49,278 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-06 00:41:49,675 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-06 00:41:49,675 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-06 00:41:49,681 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:41:49,681 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:49,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:49,686 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-06 00:41:49,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:49,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-06 00:41:49,739 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:41:49,742 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-06 00:41:49,742 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-06 00:41:49,742 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-06 00:41:49,742 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-06 00:41:49,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:41:49,873 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:41:49,912 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:49,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:49,918 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:49,955 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:41:49,961 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52454a4e20> has no local changes 2024-10-06 00:41:49,962 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:41:49,970 [ scc.git] DEBUG [detached HEAD f6e3f3d] merge master -Dorg -Ssuccess-only 2024-10-06 00:41:49,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:49,971 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:41:50,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-06 00:41:50,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-06 00:41:51,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-06 00:41:51,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-06 00:41:52,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:41:52,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:41:53,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-06 00:41:53,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:41:53,656 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-06 00:41:54,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-06 00:41:54,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-06 00:41:54,562 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:41:54,562 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-06 00:41:54,562 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:54,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:54,568 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:41:54,572 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:41:54,573 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:41:54,578 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:41:54,583 [ scc.git] DEBUG Already up to date. 2024-10-06 00:41:54,583 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-06 00:41:54,927 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-06 00:41:54,927 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-06 00:41:54,931 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:41:54,931 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:54,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:54,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-06 00:41:54,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:54,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-06 00:41:54,991 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:41:54,994 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-06 00:41:54,994 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-06 00:41:55,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:41:55,143 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:41:55,185 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:41:55,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:41:55,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:41:55,234 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:41:55,246 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5246519700> has no local changes 2024-10-06 00:41:55,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:41:55,256 [ scc.git] DEBUG [detached HEAD c99df9c] merge master -Dorg -Ssuccess-only 2024-10-06 00:41:55,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:41:55,257 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:41:55,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-06 00:41:56,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-06 00:41:56,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-06 00:41:57,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-06 00:41:57,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-06 00:41:58,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-06 00:41:58,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:41:58,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-06 00:41:59,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:41:59,355 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-06 00:41:59,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-06 00:42:00,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-06 00:42:00,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-06 00:42:01,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-06 00:42:01,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-06 00:42:01,629 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:42:01,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-06 00:42:01,629 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:01,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:01,635 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:42:01,640 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:42:01,641 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:42:01,647 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:42:01,652 [ scc.git] DEBUG Already up to date. 2024-10-06 00:42:01,653 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-06 00:42:02,154 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-06 00:42:02,154 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-06 00:42:02,160 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:42:02,160 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:02,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:02,166 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-06 00:42:02,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:02,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-06 00:42:02,216 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-06 00:42:02,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:02,220 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-06 00:42:02,220 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-06 00:42:02,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:02,349 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:42:02,389 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:02,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:02,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:42:02,435 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:42:02,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52467c8bb0> has no local changes 2024-10-06 00:42:02,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:42:02,450 [ scc.git] DEBUG [detached HEAD adb6533] merge master -Dorg -Ssuccess-only 2024-10-06 00:42:02,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:42:02,451 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:42:02,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-06 00:42:03,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-06 00:42:03,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-06 00:42:04,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-06 00:42:04,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-06 00:42:05,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:05,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:06,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-06 00:42:06,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:06,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-06 00:42:07,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-06 00:42:07,410 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-06 00:42:07,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-06 00:42:08,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-06 00:42:08,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-06 00:42:09,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-06 00:42:09,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:10,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-06 00:42:10,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:10,697 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-06 00:42:11,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-06 00:42:11,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-06 00:42:12,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-06 00:42:12,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:13,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-06 00:42:13,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:13,482 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-06 00:42:13,482 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:42:13,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-06 00:42:13,482 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:13,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:13,488 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:42:13,493 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:42:13,494 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:42:13,499 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:42:13,505 [ scc.git] DEBUG Already up to date. 2024-10-06 00:42:13,505 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-06 00:42:13,846 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-06 00:42:13,847 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-06 00:42:13,852 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-06 00:42:14,228 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-06 00:42:14,228 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-06 00:42:14,233 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-06 00:42:14,582 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-06 00:42:14,582 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-06 00:42:14,587 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:42:14,588 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:14,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:14,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-06 00:42:14,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:14,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-06 00:42:14,683 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-06 00:42:14,683 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-06 00:42:14,683 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-06 00:42:14,683 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:42:14,684 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:42:14,690 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-06 00:42:14,697 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-06 00:42:14,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:14,827 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-06 00:42:14,835 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-06 00:42:14,840 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-06 00:42:14,844 [ scc.config] DEBUG Found github.token 2024-10-06 00:42:14,844 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-06 00:42:14,845 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-06 00:42:14,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:14,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-06 00:42:14,887 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-06 00:42:14,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-06 00:42:14,887 [ scc.git] DEBUG Auto-merging setup.py 2024-10-06 00:42:14,887 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-06 00:42:14,887 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-06 00:42:14,887 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-06 00:42:14,887 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-06 00:42:14,887 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:42:14,888 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:42:14,894 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-06 00:42:14,900 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-06 00:42:15,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:15,217 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-06 00:42:15,225 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-06 00:42:15,231 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-10-06 00:42:15,236 [ scc.config] DEBUG Found github.token 2024-10-06 00:42:15,236 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-06 00:42:15,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-06 00:42:15,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:15,247 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-06 00:42:15,260 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-06 00:42:15,260 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-06 00:42:15,260 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:15,264 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-06 00:42:15,264 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-06 00:42:15,264 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-06 00:42:15,264 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-06 00:42:15,264 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-06 00:42:15,264 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-06 00:42:15,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:15,597 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:42:15,636 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:15,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:15,642 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:42:15,682 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:42:15,689 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5245478850> has no local changes 2024-10-06 00:42:15,689 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:42:15,698 [ scc.git] DEBUG [detached HEAD b3aba7d] merge master -Dorg -Ssuccess-only 2024-10-06 00:42:15,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:42:15,699 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:42:16,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-06 00:42:16,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-06 00:42:17,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-06 00:42:17,135 [ scc.repo] DEBUG # ... Include label: include 2024-10-06 00:42:17,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69 HTTP/1.1" 200 None 2024-10-06 00:42:18,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:18,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:19,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/9ebe57b15dbe9372768c103e01b91e86d93adf69 HTTP/1.1" 200 None 2024-10-06 00:42:19,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/9ebe57b15dbe9372768c103e01b91e86d93adf69?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:19,456 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-06 00:42:19,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-06 00:42:20,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-06 00:42:20,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-06 00:42:21,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:21,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:22,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-06 00:42:22,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:22,657 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-06 00:42:23,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-06 00:42:23,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-06 00:42:24,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584 HTTP/1.1" 200 None 2024-10-06 00:42:24,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/584/comments HTTP/1.1" 200 None 2024-10-06 00:42:24,497 [ scc.repo] DEBUG # ... Include label: include 2024-10-06 00:42:24,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-06 00:42:25,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:25,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:26,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/126a5ccc667b4fbcf9742460482bfc02cd918275 HTTP/1.1" 200 None 2024-10-06 00:42:26,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/126a5ccc667b4fbcf9742460482bfc02cd918275?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:26,808 [ scc.repo] DEBUG - PR 584 Rdornier 'Link url to image' 2024-10-06 00:42:27,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579 HTTP/1.1" 200 None 2024-10-06 00:42:27,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/579/comments HTTP/1.1" 200 None 2024-10-06 00:42:28,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-06 00:42:28,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-06 00:42:28,621 [ scc.repo] DEBUG # ... Include label: include 2024-10-06 00:42:29,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-06 00:42:29,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:30,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b59d9ee6c7ca24182d05a069fe1db887459bf63f HTTP/1.1" 200 None 2024-10-06 00:42:30,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b59d9ee6c7ca24182d05a069fe1db887459bf63f?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:30,863 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-06 00:42:31,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-06 00:42:31,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-06 00:42:32,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-06 00:42:32,249 [ scc.repo] DEBUG # ... Include label: include 2024-10-06 00:42:32,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-06 00:42:33,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:33,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:34,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/15353812686b3ac466fc705d017bd8b9a8b25aab HTTP/1.1" 200 None 2024-10-06 00:42:34,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/15353812686b3ac466fc705d017bd8b9a8b25aab?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:34,726 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-06 00:42:34,727 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:42:34,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-06 00:42:34,727 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:34,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:34,733 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:42:34,739 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:42:34,739 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:42:34,746 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:42:34,800 [ scc.git] DEBUG Updating 33d8d26c..1c0e5f95 2024-10-06 00:42:35,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/555 HTTP/1.1" 200 None 2024-10-06 00:42:36,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/587 HTTP/1.1" 200 None 2024-10-06 00:42:36,003 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-06 00:42:36,508 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-06 00:42:36,508 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-06 00:42:36,514 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-06 00:42:36,812 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-06 00:42:36,813 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-06 00:42:36,817 [ scc.git] DEBUG Calling 'git fetch origin pull/584/head' 2024-10-06 00:42:37,150 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-06 00:42:37,150 [ scc.git] DEBUG * branch refs/pull/584/head -> FETCH_HEAD 2024-10-06 00:42:37,156 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-06 00:42:37,473 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-06 00:42:37,473 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-06 00:42:37,478 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-06 00:42:38,108 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-06 00:42:38,109 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-06 00:42:38,114 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:42:38,114 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:38,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:38,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-06 00:42:38,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:38,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-06 00:42:38,361 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-06 00:42:38,361 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-06 00:42:38,361 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-06 00:42:38,361 [ scc.git] DEBUG Auto-merging src/js/shape_editor/ellipse.js 2024-10-06 00:42:38,361 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-10-06 00:42:38,361 [ scc.git] DEBUG Auto-merging src/templates/shapes/shape_toolbar.template.html 2024-10-06 00:42:38,361 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:42:38,362 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:42:38,370 [ scc.git] DEBUG Calling 'git reset --hard 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-06 00:42:38,382 [ scc.git] DEBUG HEAD is now at 1c0e5f95 Merge pull request #555 from will-moore/points_in_shapeEditor 2024-10-06 00:42:38,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:38,510 [ scc.git] DEBUG Calling 'git merge-base 1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1 15353812686b3ac466fc705d017bd8b9a8b25aab' 2024-10-06 00:42:38,520 [ scc.git] DEBUG Calling 'git diff --name-only 8a70fe9af1be66b86f098e153c6baa65a2fc5d72..1c0e5f9533db2aaea6bb96b8b3f8640d49cc61a1' 2024-10-06 00:42:38,527 [ scc.git] INFO - PR 577 Rdornier 'Fill rois' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py --conflicts 2024-10-06 00:42:38,532 [ scc.config] DEBUG Found github.token 2024-10-06 00:42:38,532 [ scc.git] DEBUG Adding comment to issue #577. 2024-10-06 00:42:39,216 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 201 1997 2024-10-06 00:42:39,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-06 00:42:39,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:39,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) b59d9ee6c7ca24182d05a069fe1db887459bf63f' 2024-10-06 00:42:39,438 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-06 00:42:39,439 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-06 00:42:39,439 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-06 00:42:39,439 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:39,446 [ scc.git] DEBUG .gitignore | 2 + 2024-10-06 00:42:39,446 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 1 - 2024-10-06 00:42:39,446 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-06 00:42:39,446 [ scc.git] DEBUG 8 files changed, 363 insertions(+), 80 deletions(-) 2024-10-06 00:42:39,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:39,606 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-06 00:42:39,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:39,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 584 (Link url to image) 126a5ccc667b4fbcf9742460482bfc02cd918275' 2024-10-06 00:42:39,689 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:39,694 [ scc.git] DEBUG omero_figure/views.py | 134 +++++++++++++++++++++++++++++++++++++----- 2024-10-06 00:42:39,694 [ scc.git] DEBUG src/js/models/figure_model.js | 10 ++-- 2024-10-06 00:42:39,694 [ scc.git] DEBUG src/js/views/figure_view.js | 10 ++-- 2024-10-06 00:42:39,694 [ scc.git] DEBUG 3 files changed, 128 insertions(+), 26 deletions(-) 2024-10-06 00:42:40,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:40,012 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-06 00:42:40,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:40,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-06 00:42:40,090 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:40,094 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-06 00:42:40,094 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-06 00:42:40,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:40,400 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9ebe57b15dbe9372768c103e01b91e86d93adf69' 2024-10-06 00:42:40,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:40,416 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) 9ebe57b15dbe9372768c103e01b91e86d93adf69' 2024-10-06 00:42:40,558 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-06 00:42:40,558 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-06 00:42:40,558 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-06 00:42:40,558 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-06 00:42:40,559 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:40,565 [ scc.git] DEBUG package-lock.json | 32 ++++++----------------- 2024-10-06 00:42:40,565 [ scc.git] DEBUG package.json | 2 +- 2024-10-06 00:42:40,565 [ scc.git] DEBUG src/css/figure.css | 13 ++++++++- 2024-10-06 00:42:40,565 [ scc.git] DEBUG src/js/models/panel_model.js | 23 +++++++++++++--- 2024-10-06 00:42:40,565 [ scc.git] DEBUG src/js/views/panel_view.js | 6 ++--- 2024-10-06 00:42:40,565 [ scc.git] DEBUG src/js/views/right_panel_view.js | 14 +++++++++- 2024-10-06 00:42:40,565 [ scc.git] DEBUG src/templates/image_display_options.template.html | 6 +++++ 2024-10-06 00:42:40,565 [ scc.git] DEBUG 7 files changed, 63 insertions(+), 33 deletions(-) 2024-10-06 00:42:40,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:40,782 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:42:40,820 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:40,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:40,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:42:40,862 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:42:40,871 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52454c8880> has no local changes 2024-10-06 00:42:40,871 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 33d8d26c..1c0e5f95 Previously merged: - PR 555 will-moore 'Points in shape editor' - PR 587 will-moore 'Update licenses.txt' Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:42:40,883 [ scc.git] DEBUG [detached HEAD 1b3f2bd3] merge master -Dorg -Ssuccess-only 2024-10-06 00:42:40,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:42:40,884 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:42:41,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-06 00:42:41,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-06 00:42:42,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-06 00:42:42,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-06 00:42:43,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:43,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-06 00:42:43,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:43,960 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-06 00:42:43,960 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:42:43,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-06 00:42:43,960 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:43,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:43,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:42:43,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:42:43,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:42:43,978 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:42:43,985 [ scc.git] DEBUG Already up to date. 2024-10-06 00:42:43,985 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-06 00:42:44,343 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-06 00:42:44,343 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-06 00:42:44,348 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:42:44,348 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:44,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:44,353 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-06 00:42:44,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:44,365 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-06 00:42:44,410 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-06 00:42:44,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:44,413 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-06 00:42:44,414 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-06 00:42:44,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:44,543 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:42:44,586 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:44,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:44,592 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:42:44,633 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:42:44,640 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5248913820> has no local changes 2024-10-06 00:42:44,640 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:42:44,648 [ scc.git] DEBUG [detached HEAD 79d4315] merge master -Dorg -Ssuccess-only 2024-10-06 00:42:44,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:42:44,649 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:42:45,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-06 00:42:45,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-06 00:42:45,459 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:42:45,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-06 00:42:46,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:47,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:47,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-06 00:42:47,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:47,904 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-06 00:42:47,904 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:42:47,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-06 00:42:47,904 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:47,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:47,909 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:42:47,915 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:42:47,915 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:42:47,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:42:47,927 [ scc.git] DEBUG Already up to date. 2024-10-06 00:42:47,927 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-06 00:42:48,231 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-06 00:42:48,231 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-06 00:42:48,235 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:42:48,235 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:48,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:48,241 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-06 00:42:48,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:48,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-06 00:42:48,263 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:42:48,267 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-06 00:42:48,268 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-06 00:42:48,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:42:48,483 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:42:48,526 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:42:48,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:42:48,533 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:42:48,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:42:48,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5245490d60> has no local changes 2024-10-06 00:42:48,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:42:48,591 [ scc.git] DEBUG [detached HEAD 8ce3922] merge master -Dorg -Ssuccess-only 2024-10-06 00:42:48,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:42:48,592 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:42:49,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-06 00:42:49,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-06 00:42:49,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-06 00:42:49,947 [ scc.repo] DEBUG # ... Include label: include 2024-10-06 00:42:50,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-06 00:42:50,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:51,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:51,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/68b90aebf749c074bde218ba36d3ce662068cd05 HTTP/1.1" 200 None 2024-10-06 00:42:52,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/68b90aebf749c074bde218ba36d3ce662068cd05?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:52,262 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-06 00:42:52,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-06 00:42:52,713 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:42:53,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-06 00:42:53,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:54,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:54,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-06 00:42:55,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:55,064 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-06 00:42:55,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-06 00:42:55,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-06 00:42:56,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-06 00:42:56,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:42:57,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:42:57,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-06 00:42:58,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:42:58,189 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-06 00:42:58,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/481 HTTP/1.1" 200 None 2024-10-06 00:42:59,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-06 00:42:59,116 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:42:59,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-06 00:43:00,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:00,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:01,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-06 00:43:01,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:01,659 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-06 00:43:02,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-06 00:43:02,106 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:43:02,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-06 00:43:03,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:03,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:04,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-06 00:43:04,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:04,547 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-06 00:43:04,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-06 00:43:05,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-06 00:43:05,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-06 00:43:06,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:06,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:07,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-06 00:43:07,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:07,794 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-06 00:43:08,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-06 00:43:08,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-06 00:43:09,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-06 00:43:09,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:10,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:10,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-06 00:43:10,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:10,906 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-06 00:43:11,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-06 00:43:11,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-06 00:43:12,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-06 00:43:12,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:13,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-06 00:43:13,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:13,649 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-06 00:43:13,650 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:13,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-06 00:43:13,650 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:13,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:13,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:13,663 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:13,663 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:13,701 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:13,706 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:13,707 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-06 00:43:14,262 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:14,262 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-06 00:43:14,267 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-06 00:43:15,472 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:15,472 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-06 00:43:15,478 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-06 00:43:15,908 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:15,908 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-06 00:43:15,913 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-06 00:43:16,199 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:16,199 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-06 00:43:16,204 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-06 00:43:16,488 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:16,488 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-06 00:43:16,493 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-06 00:43:16,837 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:16,837 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-06 00:43:16,843 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-06 00:43:17,125 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:17,125 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-06 00:43:17,130 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-06 00:43:17,649 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-06 00:43:17,649 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-06 00:43:17,654 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:17,655 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:17,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:17,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-06 00:43:17,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:17,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-06 00:43:17,759 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-06 00:43:17,760 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:17,763 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-06 00:43:17,763 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-06 00:43:17,763 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-06 00:43:17,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:17,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-06 00:43:17,919 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:17,923 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-06 00:43:18,086 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-06 00:43:18,086 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-06 00:43:18,086 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-06 00:43:18,086 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-06 00:43:18,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:18,091 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-06 00:43:18,091 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-06 00:43:18,091 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-06 00:43:18,091 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-06 00:43:18,091 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-06 00:43:18,091 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-06 00:43:18,091 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-06 00:43:18,091 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-06 00:43:18,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:18,301 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-06 00:43:18,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:18,315 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-06 00:43:18,395 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-06 00:43:18,396 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:18,399 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-06 00:43:18,399 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-06 00:43:18,399 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-06 00:43:18,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:18,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-06 00:43:18,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:18,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-06 00:43:18,748 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:18,757 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-06 00:43:18,757 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-06 00:43:19,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:19,063 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-06 00:43:19,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:19,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-06 00:43:19,138 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-06 00:43:19,138 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:19,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:19,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-06 00:43:19,451 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:19,456 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-06 00:43:19,591 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-06 00:43:19,592 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-06 00:43:19,592 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-06 00:43:19,592 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-06 00:43:19,597 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-06 00:43:19,597 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-06 00:43:19,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:19,832 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-06 00:43:19,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:19,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-06 00:43:19,965 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-06 00:43:19,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:19,977 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-06 00:43:19,977 [ scc.git] DEBUG package.json | 2 +- 2024-10-06 00:43:19,977 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-06 00:43:20,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:20,214 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-06 00:43:20,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:20,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 68b90aebf749c074bde218ba36d3ce662068cd05' 2024-10-06 00:43:20,247 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:20,250 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-06 00:43:20,250 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-06 00:43:20,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:20,597 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:20,636 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:20,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:20,643 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:20,681 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:20,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443d6340> has no local changes 2024-10-06 00:43:20,689 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:20,699 [ scc.git] DEBUG [detached HEAD 5fc4fa5] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:20,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:20,699 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:21,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-06 00:43:21,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-06 00:43:22,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-06 00:43:22,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-06 00:43:23,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:23,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:23,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-06 00:43:24,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-06 00:43:24,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-06 00:43:25,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:25,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-06 00:43:26,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:26,328 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-06 00:43:26,328 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:26,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-06 00:43:26,328 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:26,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:26,334 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:26,340 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:26,340 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:26,346 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:26,351 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:26,352 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-06 00:43:26,648 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-06 00:43:26,648 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-06 00:43:26,653 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:26,653 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:26,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:26,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-06 00:43:26,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:26,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-06 00:43:26,682 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:26,685 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-06 00:43:26,685 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-06 00:43:26,685 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-06 00:43:26,685 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-06 00:43:26,685 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-06 00:43:26,685 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-06 00:43:26,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:26,826 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:26,868 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:26,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:26,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:26,915 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:26,922 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443d62e0> has no local changes 2024-10-06 00:43:26,923 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:26,934 [ scc.git] DEBUG [detached HEAD ee77ba1] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:26,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:26,936 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:27,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-06 00:43:27,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-06 00:43:28,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-06 00:43:28,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-06 00:43:29,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:29,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-06 00:43:30,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:30,120 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-06 00:43:30,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-06 00:43:31,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-06 00:43:31,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-06 00:43:32,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:32,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-06 00:43:32,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:32,893 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-06 00:43:33,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-06 00:43:33,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-06 00:43:34,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-06 00:43:34,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:35,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-06 00:43:35,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:35,604 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-06 00:43:35,604 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:35,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-06 00:43:35,605 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:35,605 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:35,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:35,615 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:35,615 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:35,620 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:35,625 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:35,626 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-06 00:43:36,086 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-06 00:43:36,086 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-06 00:43:36,091 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-06 00:43:36,547 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-06 00:43:36,547 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-06 00:43:36,552 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-06 00:43:36,848 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-06 00:43:36,848 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-06 00:43:36,853 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:36,853 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:36,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:36,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-06 00:43:36,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:36,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-06 00:43:36,934 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-06 00:43:36,934 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-06 00:43:36,934 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-06 00:43:36,934 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-06 00:43:36,935 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:43:36,935 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:43:36,940 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-06 00:43:36,947 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-06 00:43:37,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:37,091 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-06 00:43:37,098 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-06 00:43:37,104 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-10-06 00:43:37,109 [ scc.config] DEBUG Found github.token 2024-10-06 00:43:37,109 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-06 00:43:37,109 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-06 00:43:37,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:37,120 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-06 00:43:37,153 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-06 00:43:37,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-06 00:43:37,153 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-06 00:43:37,153 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:43:37,153 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:43:37,160 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-06 00:43:37,167 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-06 00:43:37,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:37,470 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-06 00:43:37,478 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-06 00:43:37,483 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-06 00:43:37,488 [ scc.config] DEBUG Found github.token 2024-10-06 00:43:37,488 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-06 00:43:37,488 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-06 00:43:37,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:37,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-06 00:43:37,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:37,518 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-06 00:43:37,518 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-06 00:43:37,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:37,869 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:37,908 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:37,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:37,913 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:37,950 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:37,956 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5244441f70> has no local changes 2024-10-06 00:43:37,956 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:37,965 [ scc.git] DEBUG [detached HEAD b5cd302] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:37,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:37,965 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:38,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-06 00:43:38,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-06 00:43:38,800 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:43:39,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-06 00:43:39,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:40,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:40,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-06 00:43:41,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:41,187 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-06 00:43:41,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-06 00:43:41,652 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:43:42,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-06 00:43:42,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:43,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:43,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-06 00:43:44,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:44,014 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-06 00:43:44,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-06 00:43:44,451 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-06 00:43:44,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-06 00:43:45,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:45,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:43:46,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-06 00:43:46,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:46,933 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-06 00:43:47,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-06 00:43:47,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-06 00:43:48,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-06 00:43:48,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-06 00:43:49,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-06 00:43:49,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-06 00:43:49,752 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:49,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-06 00:43:49,752 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:49,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:49,759 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:49,764 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:49,764 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:49,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:49,776 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:49,776 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-06 00:43:50,104 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-06 00:43:50,104 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-06 00:43:50,109 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-06 00:43:50,401 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-06 00:43:50,401 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-06 00:43:50,405 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-06 00:43:50,760 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-06 00:43:50,761 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-06 00:43:50,765 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:50,765 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:50,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:50,771 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-06 00:43:50,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:50,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-06 00:43:50,790 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:50,793 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-06 00:43:50,793 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-06 00:43:50,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:50,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-06 00:43:50,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:50,941 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-06 00:43:51,001 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-06 00:43:51,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:51,005 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-06 00:43:51,005 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-06 00:43:51,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:51,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-06 00:43:51,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:51,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-06 00:43:51,350 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-06 00:43:51,350 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:51,354 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-06 00:43:51,354 [ scc.git] DEBUG package.json | 2 +- 2024-10-06 00:43:51,354 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-06 00:43:51,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:51,690 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:51,732 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:51,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:51,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:51,778 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:51,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5245466c40> has no local changes 2024-10-06 00:43:51,786 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:51,795 [ scc.git] DEBUG [detached HEAD efb4bc5] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:51,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:51,796 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:52,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-06 00:43:52,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-06 00:43:53,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-06 00:43:53,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:53,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-06 00:43:54,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:54,370 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-06 00:43:54,370 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:54,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-06 00:43:54,370 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:54,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:54,376 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:54,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:54,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:54,389 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:54,395 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:54,396 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-06 00:43:54,702 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-06 00:43:54,702 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-06 00:43:54,707 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:54,707 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:54,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:54,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-06 00:43:54,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:54,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-06 00:43:54,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:54,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:54,875 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:54,914 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:54,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:54,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:54,957 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:54,963 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f524440eb80> has no local changes 2024-10-06 00:43:54,964 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:54,971 [ scc.git] DEBUG [detached HEAD 85d2387] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:54,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:54,972 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:55,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-06 00:43:55,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-06 00:43:56,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-06 00:43:56,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-06 00:43:57,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-06 00:43:57,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:43:58,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-06 00:43:58,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:43:58,530 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-06 00:43:58,530 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:43:58,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-06 00:43:58,530 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:58,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:58,537 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:43:58,542 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:43:58,542 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:43:58,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:43:58,555 [ scc.git] DEBUG Already up to date. 2024-10-06 00:43:58,555 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-06 00:43:59,029 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-06 00:43:59,029 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-06 00:43:59,034 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:43:59,034 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:59,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:59,039 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-06 00:43:59,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:59,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-06 00:43:59,059 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-06 00:43:59,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:43:59,061 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-06 00:43:59,061 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-06 00:43:59,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:43:59,195 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:43:59,234 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:43:59,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:43:59,241 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:43:59,278 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:43:59,285 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5244424f10> has no local changes 2024-10-06 00:43:59,285 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:43:59,293 [ scc.git] DEBUG [detached HEAD e17cc9f] merge master -Dorg -Ssuccess-only 2024-10-06 00:43:59,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:43:59,294 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:43:59,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-06 00:44:00,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-06 00:44:00,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-06 00:44:01,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-06 00:44:01,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:02,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-06 00:44:02,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:02,482 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-06 00:44:02,482 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:02,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-06 00:44:02,482 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:02,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:02,488 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:02,493 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:02,493 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:02,498 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:02,504 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:02,504 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-06 00:44:02,827 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-06 00:44:02,827 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-06 00:44:02,831 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:02,831 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:02,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:02,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-06 00:44:02,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:02,850 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-06 00:44:02,894 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-06 00:44:02,894 [ scc.git] DEBUG Auto-merging setup.py 2024-10-06 00:44:02,895 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-06 00:44:02,895 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:44:02,895 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:44:02,900 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-06 00:44:02,906 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-06 00:44:03,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:03,078 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-06 00:44:03,085 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-06 00:44:03,090 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2024-10-06 00:44:03,094 [ scc.config] DEBUG Found github.token 2024-10-06 00:44:03,094 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-06 00:44:03,094 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:03,130 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:03,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:03,135 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:03,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:03,176 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f524440be50> has no local changes 2024-10-06 00:44:03,176 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:03,184 [ scc.git] DEBUG [detached HEAD 8572726] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:03,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:03,184 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:03,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-06 00:44:03,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-06 00:44:04,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-06 00:44:04,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-06 00:44:05,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:05,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-06 00:44:06,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:06,295 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-06 00:44:06,295 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:06,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-06 00:44:06,295 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:06,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:06,301 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:06,306 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:06,306 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:06,311 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:06,317 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:06,317 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-06 00:44:06,723 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-06 00:44:06,724 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-06 00:44:06,729 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:06,729 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:06,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:06,736 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-06 00:44:06,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:06,749 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-06 00:44:06,773 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:44:06,776 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-06 00:44:06,776 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-06 00:44:06,776 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-06 00:44:06,777 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-06 00:44:06,779 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-06 00:44:06,779 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-06 00:44:06,780 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-06 00:44:06,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:06,914 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:06,951 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:06,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:06,957 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:06,996 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:07,003 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443c6fd0> has no local changes 2024-10-06 00:44:07,003 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:07,011 [ scc.git] DEBUG [detached HEAD feeb08b] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:07,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:07,011 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:07,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-06 00:44:07,313 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:07,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-06 00:44:07,313 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,319 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:07,324 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:07,324 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:07,328 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:07,333 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:07,334 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:07,334 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,338 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:07,375 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,380 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:07,420 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:07,426 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443cfb80> has no local changes 2024-10-06 00:44:07,426 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:07,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:07,434 [ scc.git] DEBUG [detached HEAD b37373d] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:07,434 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:07,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-06 00:44:07,716 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:07,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-06 00:44:07,716 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,722 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:07,727 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:07,727 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:07,732 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:07,737 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:07,737 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:07,737 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,741 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:07,781 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:07,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:07,787 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:07,827 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:07,833 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443c9d90> has no local changes 2024-10-06 00:44:07,833 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:07,841 [ scc.git] DEBUG [detached HEAD 9a29a0b] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:07,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:07,841 [ scc.git] INFO Overriding base-branch from master to main 2024-10-06 00:44:07,841 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:08,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-06 00:44:08,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-06 00:44:09,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-06 00:44:09,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-06 00:44:10,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-06 00:44:10,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:10,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-06 00:44:11,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:11,392 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-06 00:44:11,393 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:11,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-06 00:44:11,393 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:11,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:11,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-06 00:44:11,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:11,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-06 00:44:11,409 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-06 00:44:11,414 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:11,415 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-06 00:44:11,784 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-06 00:44:11,784 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-06 00:44:11,788 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:11,788 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:11,789 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:11,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-06 00:44:11,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:11,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-06 00:44:11,832 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-06 00:44:11,832 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-06 00:44:11,832 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:44:11,833 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:44:11,839 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-06 00:44:11,846 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-06 00:44:12,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:12,010 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-06 00:44:12,017 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-06 00:44:12,022 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-06 00:44:12,028 [ scc.config] DEBUG Found github.token 2024-10-06 00:44:12,028 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-06 00:44:12,028 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:12,068 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:12,111 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:12,117 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f524431b1c0> has no local changes 2024-10-06 00:44:12,117 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:12,124 [ scc.git] DEBUG [detached HEAD f0ae508] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:12,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:12,124 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:12,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-06 00:44:12,419 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:12,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-06 00:44:12,419 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,425 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:12,429 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:12,430 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:12,434 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:12,439 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:12,440 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:12,440 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,444 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:12,481 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,486 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:12,522 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:12,528 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52443b8fa0> has no local changes 2024-10-06 00:44:12,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:12,536 [ scc.git] DEBUG [detached HEAD f2c8909] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:12,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:12,536 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:12,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-06 00:44:12,846 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:12,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-06 00:44:12,846 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:12,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:12,857 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:12,863 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:12,869 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:12,869 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:12,869 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,874 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:12,915 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:12,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:12,922 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:12,961 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:12,968 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5244367f10> has no local changes 2024-10-06 00:44:12,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:12,979 [ scc.git] DEBUG [detached HEAD 7801e7e] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:12,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:12,980 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:13,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-06 00:44:13,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-06 00:44:14,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-06 00:44:14,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-06 00:44:15,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:15,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-06 00:44:15,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:15,876 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-06 00:44:15,876 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:15,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-06 00:44:15,876 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:15,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:15,882 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-06 00:44:15,888 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:15,888 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-06 00:44:15,894 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-06 00:44:15,900 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:15,900 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-06 00:44:16,229 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-06 00:44:16,229 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-06 00:44:16,234 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:16,234 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:16,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:16,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-06 00:44:16,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:16,250 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-06 00:44:16,282 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-06 00:44:16,282 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-06 00:44:16,282 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:44:16,282 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:44:16,289 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-06 00:44:16,295 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-06 00:44:16,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:16,435 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-06 00:44:16,441 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-06 00:44:16,446 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-06 00:44:16,450 [ scc.config] DEBUG Found github.token 2024-10-06 00:44:16,450 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-06 00:44:16,450 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:16,490 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:16,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:16,495 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:16,534 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:16,541 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5244376e50> has no local changes 2024-10-06 00:44:16,541 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:16,549 [ scc.git] DEBUG [detached HEAD 16e0891] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:16,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:16,550 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-06 00:44:16,550 [ scc.repo] DEBUG ## PRs found: 2024-10-06 00:44:17,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-06 00:44:17,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-06 00:44:17,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-06 00:44:18,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:18,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-06 00:44:19,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-06 00:44:19,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:19,690 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-06 00:44:20,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-06 00:44:20,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-06 00:44:21,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-06 00:44:21,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-06 00:44:21,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-06 00:44:22,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-06 00:44:22,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-06 00:44:23,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-06 00:44:23,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-06 00:44:24,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-06 00:44:24,070 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-06 00:44:24,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-06 00:44:25,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-06 00:44:25,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-06 00:44:25,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-06 00:44:25,942 [ scc.repo] DEBUG ## Branches found: 2024-10-06 00:44:25,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-06 00:44:25,942 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:25,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:25,948 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-06 00:44:25,954 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-06 00:44:25,954 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-06 00:44:25,960 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-06 00:44:25,966 [ scc.git] DEBUG Already up to date. 2024-10-06 00:44:25,967 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-06 00:44:26,433 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-06 00:44:26,433 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-06 00:44:26,440 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-06 00:44:26,840 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-06 00:44:26,840 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-06 00:44:26,845 [ scc.git] DEBUG ## Unique users: [] 2024-10-06 00:44:26,845 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:26,845 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:26,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-06 00:44:26,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:26,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-06 00:44:26,902 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-06 00:44:26,902 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-06 00:44:26,902 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-06 00:44:26,903 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-06 00:44:26,909 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-06 00:44:26,916 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-06 00:44:27,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:27,052 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-06 00:44:27,060 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-06 00:44:27,067 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#203](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-06 00:44:27,072 [ scc.config] DEBUG Found github.token 2024-10-06 00:44:27,072 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-06 00:44:27,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-06 00:44:27,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:27,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-06 00:44:27,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-06 00:44:27,136 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-06 00:44:27,137 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-06 00:44:27,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:27,446 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-06 00:44:27,489 [ scc.git] DEBUG Get sha1 of %s 2024-10-06 00:44:27,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-06 00:44:27,496 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:27,535 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:27,542 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5244351640> has no local changes 2024-10-06 00:44:27,542 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:27,551 [ scc.git] DEBUG [detached HEAD dfa8993] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:27,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:27,552 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-06 00:44:27,631 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-06 00:44:27,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:27,840 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-06 00:44:27,845 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-06 00:44:28,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:28,228 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-06 00:44:28,233 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-06 00:44:28,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:28,614 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-06 00:44:28,619 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-06 00:44:28,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:29,004 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-06 00:44:29,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:29,389 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-06 00:44:29,395 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-06 00:44:29,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:29,783 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-06 00:44:29,787 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-06 00:44:30,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:30,169 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-06 00:44:30,174 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-06 00:44:30,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:30,561 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-06 00:44:30,566 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-06 00:44:30,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:30,938 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-06 00:44:30,943 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-06 00:44:31,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:31,326 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-06 00:44:31,331 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-06 00:44:31,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:31,711 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-06 00:44:31,715 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-06 00:44:32,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:32,094 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-06 00:44:32,100 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-06 00:44:32,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:32,489 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-06 00:44:32,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:32,864 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-06 00:44:33,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:33,240 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-06 00:44:33,245 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-06 00:44:33,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:33,618 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-06 00:44:33,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:33,997 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-06 00:44:34,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:34,369 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-06 00:44:34,373 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-06 00:44:34,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:34,759 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-06 00:44:34,764 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-06 00:44:35,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:35,208 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-06 00:44:35,212 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-06 00:44:35,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:35,592 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-06 00:44:35,597 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-06 00:44:35,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-06 00:44:35,968 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-06 00:44:35,968 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-06 00:44:36,053 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f52467d40a0> has local changes 2024-10-06 00:44:36,054 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Updating 33d8d26c..1c0e5f95 Previously merged: - PR 555 will-moore 'Points in shape editor' - PR 587 will-moore 'Update licenses.txt' Merged PRs: - PR 578 Rdornier 'Image outline' - PR 584 Rdornier 'Link url to image' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PRs (not included): - PR 577 Rdornier 'Fill rois' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Repository: ome/omero-mapr Excluded PRs: - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#203 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/203/)' 2024-10-06 00:44:36,068 [ scc.git] DEBUG [detached HEAD 113d5c9] merge master -Dorg -Ssuccess-only 2024-10-06 00:44:36,069 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-06 00:44:36,069 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-06 00:44:36,069 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,069 [ scc.merge] INFO 2024-10-06 00:44:36,069 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,069 [ scc.merge] INFO - PR 392 dependabot[bot] 'Bump omero-figure from `5f62399` to `33d8d26`' 2024-10-06 00:44:36,069 [ scc.merge] INFO 2024-10-06 00:44:36,069 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-06 00:44:36,069 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,069 [ scc.merge] INFO 2024-10-06 00:44:36,069 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,069 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-06 00:44:36,069 [ scc.merge] INFO 2024-10-06 00:44:36,069 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-06 00:44:36,070 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-06 00:44:36,070 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-06 00:44:36,070 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-06 00:44:36,070 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-06 00:44:36,070 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-06 00:44:36,070 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-06 00:44:36,070 [ scc.merge] INFO 2024-10-06 00:44:36,070 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-06 00:44:36,070 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' (user: MinaEnayat) 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 579 Tom-TBT 'Perceptibly uniform luts for OMERO.figure' (user: Tom-TBT) 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-06 00:44:36,070 [ scc.merge] INFO Updating 33d8d26c..1c0e5f95 2024-10-06 00:44:36,070 [ scc.merge] INFO Previously merged: 2024-10-06 00:44:36,070 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 587 will-moore 'Update licenses.txt' 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 584 Rdornier 'Link url to image' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-06 00:44:36,071 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-06 00:44:36,071 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-06 00:44:36,071 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 481 Tom-TBT 'Perceptibly uniform luts for OMERO.iviewer' (user: Tom-TBT) 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-06 00:44:36,071 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,071 [ scc.merge] INFO 2024-10-06 00:44:36,071 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-06 00:44:36,071 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-06 00:44:36,072 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-06 00:44:36,072 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-06 00:44:36,072 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-06 00:44:36,072 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-06 00:44:36,072 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-06 00:44:36,072 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,072 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-06 00:44:36,072 [ scc.merge] INFO 2024-10-06 00:44:36,072 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-06 00:44:36,073 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-06 00:44:36,073 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,073 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO 2024-10-06 00:44:36,073 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-06 00:44:36,073 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-06 00:44:36,074 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO Repository: ome/scripts 2024-10-06 00:44:36,074 [ scc.merge] INFO Excluded PRs: 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-06 00:44:36,074 [ scc.merge] INFO Already up to date. 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO Merged PRs: 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-06 00:44:36,074 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-06 00:44:36,074 [ scc.merge] INFO 2024-10-06 00:44:36,074 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-06 00:44:36,074 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,080 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-06 00:44:36,080 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-06 00:44:36,085 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-06 00:44:36,090 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,094 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-06 00:44:36,094 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-06 00:44:36,099 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-06 00:44:36,104 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-06 00:44:36,109 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-06 00:44:36,114 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-06 00:44:36,119 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-06 00:44:36,124 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-06 00:44:36,128 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-06 00:44:36,133 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-06 00:44:36,139 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-06 00:44:36,145 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-06 00:44:36,151 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-06 00:44:36,157 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,162 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-06 00:44:36,162 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-06 00:44:36,168 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-06 00:44:36,173 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-06 00:44:36,179 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-06 00:44:36,185 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-06 00:44:36,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-06 00:44:36,190 [ scc.git] DEBUG Calling 'git remote' 2024-10-06 00:44:36,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 563ddef] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 33d8d26c nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 6aacda5] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-06 00:45:20,791 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-06 00:45:29,449 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-06 00:45:31,724 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-06 00:45:36,138 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-06 00:46:14,876 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS