![[Jenkins]](/jenkins/static/9e710227/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 261 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 40d03203329d993b707c1830c07afe288356a5b0 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 40d03203329d993b707c1830c07afe288356a5b0 # timeout=10 Commit message: "Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe" > git rev-list --no-walk 40d03203329d993b707c1830c07afe288356a5b0 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 226 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.2 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.4.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.4.0-py3-none-any.whl (362 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.4.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-10-27 00:42:58,647 [ scc.config] DEBUG Found github.token 2024-10-27 00:42:58,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-27 00:42:58,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:42:59,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:42:59,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-27 00:42:59,588 [ scc.gh] DEBUG 4008 remaining from 5000 (Reset at 00:10 2024-10-27 00:42:59,588 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:42:59,593 [ scc.git] DEBUG Check current status 2024-10-27 00:42:59,594 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:42:59,597 [ scc.git] DEBUG 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-27 00:42:59,598 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:42:59,648 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-27 00:42:59,651 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-27 00:42:59,653 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-27 00:42:59,657 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-27 00:43:01,750 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-27 00:43:01,753 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-27 00:43:01,757 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-27 00:43:01,765 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-27 00:43:01,769 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-27 00:43:01,772 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-27 00:43:01,775 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-27 00:43:01,778 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-27 00:43:01,781 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-27 00:43:01,784 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-27 00:43:01,788 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-27 00:43:01,791 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-27 00:43:01,794 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-27 00:43:01,797 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-27 00:43:01,799 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-27 00:43:01,802 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-27 00:43:01,805 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-27 00:43:01,808 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-27 00:43:01,815 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:02,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-27 00:43:02,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:02,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:03,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:03,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:03,728 [ scc.git] DEBUG Resetting... 2024-10-27 00:43:03,728 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-27 00:43:03,738 [ scc.git] DEBUG HEAD is now at 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-27 00:43:03,738 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-27 00:43:03,837 [ scc.git] DEBUG Check current status 2024-10-27 00:43:03,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:03,842 [ scc.git] DEBUG 40d0320 Merge pull request #394 from ome/dependabot/submodules/omero-figure-24444fe 2024-10-27 00:43:03,842 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:03,892 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-27 00:43:03,895 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-27 00:43:03,898 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-27 00:43:03,905 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-27 00:43:03,916 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-27 00:43:03,920 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-27 00:43:03,923 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-27 00:43:03,926 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-27 00:43:03,929 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-27 00:43:03,932 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-27 00:43:03,934 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-27 00:43:03,937 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-27 00:43:03,940 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-27 00:43:03,942 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-27 00:43:03,945 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-27 00:43:03,948 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-27 00:43:03,950 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-27 00:43:03,952 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-27 00:43:03,955 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-27 00:43:03,957 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-27 00:43:03,960 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-27 00:43:03,963 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-27 00:43:03,964 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-27 00:43:03,964 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-27 00:43:03,964 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-27 00:43:03,964 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-27 00:43:03,964 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-27 00:43:03,964 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:43:04,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-10-27 00:43:04,154 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:43:04,154 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:43:04,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:43:04,159 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:43:04,163 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:43:04,163 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:43:04,168 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:43:04,173 [ scc.git] DEBUG Already up to date. 2024-10-27 00:43:04,173 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:43:04,174 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:43:04,174 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:43:04,177 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:43:04,234 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:43:04,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:43:04,238 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:43:06,245 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f60535c98b0> has no local changes 2024-10-27 00:43:06,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:43:06,323 [ scc.git] DEBUG [detached HEAD 464f861] merge master -Dorg -Snone 2024-10-27 00:43:06,323 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-27 00:43:06,323 [ scc.merge] INFO Already up to date. 2024-10-27 00:43:06,324 [ scc.merge] INFO 2024-10-27 00:43:06,324 [ scc.merge] INFO 2024-10-27 00:43:06,324 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-27 00:43:06,324 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-10-27 00:43:14,430 [ scc.config] DEBUG Found github.token 2024-10-27 00:43:14,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-10-27 00:43:14,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:43:14,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:43:15,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-10-27 00:43:15,354 [ scc.gh] DEBUG 4000 remaining from 5000 (Reset at 00:10 2024-10-27 00:43:15,355 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:15,360 [ scc.git] DEBUG Check current status 2024-10-27 00:43:15,360 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:15,364 [ scc.git] DEBUG 464f861 merge master -Dorg -Snone 2024-10-27 00:43:15,364 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:15,410 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-27 00:43:15,413 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-27 00:43:15,416 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-27 00:43:15,419 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-27 00:43:15,429 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-27 00:43:15,431 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-27 00:43:15,434 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-27 00:43:15,437 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-27 00:43:15,440 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-27 00:43:15,443 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-27 00:43:15,445 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-27 00:43:15,447 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-27 00:43:15,450 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-27 00:43:15,453 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-27 00:43:15,456 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-27 00:43:15,458 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-27 00:43:15,462 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-27 00:43:15,465 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-27 00:43:15,468 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-27 00:43:15,470 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-27 00:43:15,473 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-27 00:43:15,477 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-27 00:43:15,482 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:15,482 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-10-27 00:43:15,484 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-10-27 00:43:15,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-10-27 00:43:16,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:16,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:17,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:17,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:17,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:17,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-27 00:43:17,533 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:17,537 [ scc.git] DEBUG Check current status 2024-10-27 00:43:17,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:17,540 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-10-27 00:43:17,541 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:17,580 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:17,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-10-27 00:43:18,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:18,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:19,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:19,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:19,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:19,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:19,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-27 00:43:19,628 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:19,632 [ scc.git] DEBUG Check current status 2024-10-27 00:43:19,632 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:19,635 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-10-27 00:43:19,635 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:19,676 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:20,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-10-27 00:43:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:20,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:21,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:21,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:21,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:21,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:21,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-27 00:43:21,694 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:21,698 [ scc.git] DEBUG Check current status 2024-10-27 00:43:21,698 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:21,702 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-10-27 00:43:21,702 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:21,746 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:22,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-10-27 00:43:22,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:22,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:23,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:23,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:23,753 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:23,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:23,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-27 00:43:23,797 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:23,802 [ scc.git] DEBUG Check current status 2024-10-27 00:43:23,802 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:23,806 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-27 00:43:23,807 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:23,853 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:24,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-10-27 00:43:24,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:25,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:25,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:25,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:25,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:25,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:25,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-27 00:43:25,881 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:25,885 [ scc.git] DEBUG Check current status 2024-10-27 00:43:25,885 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:25,935 [ scc.git] DEBUG 24444fe6 Merge pull request #584 from Rdornier/link-url-to-image 2024-10-27 00:43:25,935 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:25,981 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:26,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-10-27 00:43:26,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:27,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:27,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:27,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:27,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:28,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:28,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-27 00:43:28,017 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:28,023 [ scc.git] DEBUG Check current status 2024-10-27 00:43:28,023 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:28,029 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-27 00:43:28,029 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:28,081 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:28,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-10-27 00:43:28,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:29,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:29,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:30,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:30,102 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:30,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:30,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-27 00:43:30,139 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:30,144 [ scc.git] DEBUG Check current status 2024-10-27 00:43:30,144 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:30,147 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-10-27 00:43:30,147 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:30,189 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:30,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-10-27 00:43:31,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:31,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:31,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:32,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:32,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:32,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:32,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-27 00:43:32,253 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:32,257 [ scc.git] DEBUG Check current status 2024-10-27 00:43:32,258 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:32,264 [ scc.git] DEBUG a8f380f Merge pull request #476 from ome/dependabot/npm_and_yarn/braces-3.0.3 2024-10-27 00:43:32,265 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:32,311 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:32,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-10-27 00:43:33,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:33,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:33,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:34,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:34,332 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:34,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:34,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-27 00:43:34,372 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:34,378 [ scc.git] DEBUG Check current status 2024-10-27 00:43:34,378 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:34,382 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-10-27 00:43:34,382 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:34,421 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:34,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-10-27 00:43:35,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:35,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:36,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:36,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:36,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:36,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-27 00:43:36,497 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:36,502 [ scc.git] DEBUG Check current status 2024-10-27 00:43:36,502 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:36,508 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-27 00:43:36,508 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:36,550 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:36,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-10-27 00:43:37,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:37,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:38,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:38,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:38,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:38,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:38,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-27 00:43:38,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:38,723 [ scc.git] DEBUG Check current status 2024-10-27 00:43:38,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:38,728 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-10-27 00:43:38,728 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:38,782 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:39,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-10-27 00:43:39,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:40,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:40,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:40,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:40,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:40,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:40,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-27 00:43:40,910 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:40,916 [ scc.git] DEBUG Check current status 2024-10-27 00:43:40,916 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:40,920 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-10-27 00:43:40,920 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:40,967 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:41,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-10-27 00:43:41,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:42,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:42,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:42,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:42,931 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:42,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:42,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-27 00:43:42,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:42,979 [ scc.git] DEBUG Check current status 2024-10-27 00:43:42,979 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:42,984 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-10-27 00:43:42,985 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:43,037 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:43,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-10-27 00:43:43,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:44,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:44,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:45,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:45,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:45,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:45,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-27 00:43:45,084 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:45,089 [ scc.git] DEBUG Check current status 2024-10-27 00:43:45,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:45,094 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-27 00:43:45,094 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:45,138 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:45,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-10-27 00:43:46,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:46,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:46,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:47,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:47,200 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:47,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:47,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-27 00:43:47,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:47,260 [ scc.git] DEBUG Check current status 2024-10-27 00:43:47,260 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:47,266 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-10-27 00:43:47,266 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:47,315 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:47,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-27 00:43:47,603 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-27 00:43:47,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-10-27 00:43:48,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:48,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:49,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:49,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:49,408 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:49,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:49,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-27 00:43:49,458 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:49,463 [ scc.git] DEBUG Check current status 2024-10-27 00:43:49,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:49,468 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-10-27 00:43:49,468 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:49,515 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:49,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-10-27 00:43:50,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:50,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:51,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:51,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:51,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:51,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:51,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-27 00:43:51,573 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:51,578 [ scc.git] DEBUG Check current status 2024-10-27 00:43:51,578 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:51,583 [ scc.git] DEBUG deab817 update setup-python to v4 2024-10-27 00:43:51,583 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:51,636 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:51,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-10-27 00:43:52,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:52,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:53,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:53,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:53,709 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:53,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:53,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-27 00:43:53,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:53,763 [ scc.git] DEBUG Check current status 2024-10-27 00:43:53,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:53,768 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:53,769 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-27 00:43:53,816 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:53,817 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-10-27 00:43:54,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-10-27 00:43:54,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:55,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:55,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:55,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:55,923 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:55,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:55,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-27 00:43:55,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:55,994 [ scc.git] DEBUG Check current status 2024-10-27 00:43:55,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:55,999 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-10-27 00:43:55,999 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:56,056 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:56,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-27 00:43:56,318 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-27 00:43:56,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-10-27 00:43:56,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:57,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:43:57,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:43:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:43:58,169 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:43:58,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:43:58,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-27 00:43:58,234 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:43:58,244 [ scc.git] DEBUG Check current status 2024-10-27 00:43:58,245 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:43:58,252 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-10-27 00:43:58,253 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:43:58,301 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:43:58,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-27 00:43:58,576 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-27 00:43:58,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-10-27 00:43:59,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:43:59,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:44:00,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:44:00,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:44:00,426 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:00,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:00,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-27 00:44:00,474 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:44:00,483 [ scc.git] DEBUG Check current status 2024-10-27 00:44:00,483 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:44:00,488 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-27 00:44:00,489 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:44:00,535 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:44:00,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-10-27 00:44:01,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:44:01,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:44:02,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:44:02,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:44:02,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:02,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:02,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-27 00:44:02,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-10-27 00:44:02,604 [ scc.git] DEBUG Check current status 2024-10-27 00:44:02,604 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:44:02,625 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-27 00:44:02,626 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:44:02,675 [ scc.config] DEBUG Found remote.origin.url 2024-10-27 00:44:02,676 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-10-27 00:44:02,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-27 00:44:02,955 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-27 00:44:03,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-10-27 00:44:03,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-10-27 00:44:04,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-10-27 00:44:04,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-10-27 00:44:04,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-10-27 00:44:04,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:04,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:04,935 [ scc.git] DEBUG Resetting... 2024-10-27 00:44:04,935 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-10-27 00:44:04,948 [ scc.git] DEBUG HEAD is now at 464f861 merge master -Dorg -Snone 2024-10-27 00:44:04,948 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-10-27 00:44:05,057 [ scc.git] DEBUG Check current status 2024-10-27 00:44:05,057 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-10-27 00:44:05,063 [ scc.git] DEBUG 464f861 merge master -Dorg -Snone 2024-10-27 00:44:05,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-10-27 00:44:05,120 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-10-27 00:44:05,123 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-10-27 00:44:05,126 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-10-27 00:44:05,128 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-10-27 00:44:05,140 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-10-27 00:44:05,145 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-10-27 00:44:05,149 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-10-27 00:44:05,152 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-10-27 00:44:05,155 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-10-27 00:44:05,157 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-10-27 00:44:05,162 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-10-27 00:44:05,165 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-10-27 00:44:05,168 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-10-27 00:44:05,171 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-10-27 00:44:05,175 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-10-27 00:44:05,179 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-10-27 00:44:05,181 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-10-27 00:44:05,184 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-10-27 00:44:05,186 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-10-27 00:44:05,189 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-10-27 00:44:05,192 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-10-27 00:44:05,196 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-10-27 00:44:05,197 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-10-27 00:44:05,197 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-10-27 00:44:05,198 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-10-27 00:44:05,198 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-10-27 00:44:05,198 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-10-27 00:44:05,198 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-10-27 00:44:05,198 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:05,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-10-27 00:44:05,373 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:44:05,373 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:05,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:05,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:44:05,384 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:44:05,384 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:44:05,390 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:44:05,398 [ scc.git] DEBUG Already up to date. 2024-10-27 00:44:05,398 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:44:05,399 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:05,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:05,405 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:44:05,455 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:05,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:05,461 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:05,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-10-27 00:44:06,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-10-27 00:44:06,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-27 00:44:07,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:07,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:08,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-10-27 00:44:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:08,641 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-10-27 00:44:08,641 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:44:08,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-27 00:44:08,641 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:08,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:08,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:44:08,652 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:44:08,652 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:44:08,659 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:44:08,664 [ scc.git] DEBUG Already up to date. 2024-10-27 00:44:08,665 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-10-27 00:44:09,080 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-10-27 00:44:09,081 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-10-27 00:44:09,087 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:44:09,088 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:09,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:09,099 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-27 00:44:09,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:09,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-10-27 00:44:09,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:44:09,163 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-10-27 00:44:09,164 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-10-27 00:44:09,164 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-10-27 00:44:09,164 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-10-27 00:44:09,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:09,296 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:44:09,344 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:09,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:09,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:09,393 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:44:09,400 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f296038f400> has no local changes 2024-10-27 00:44:09,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:44:09,412 [ scc.git] DEBUG [detached HEAD 5e18e9e] merge master -Dorg -Ssuccess-only 2024-10-27 00:44:09,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:09,413 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:09,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-10-27 00:44:10,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-10-27 00:44:10,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-10-27 00:44:11,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-27 00:44:11,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:12,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:12,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-10-27 00:44:13,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:13,188 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-10-27 00:44:13,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-10-27 00:44:14,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-10-27 00:44:14,127 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:44:14,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-27 00:44:14,127 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:14,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:14,134 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:44:14,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:44:14,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:44:14,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:44:14,154 [ scc.git] DEBUG Already up to date. 2024-10-27 00:44:14,154 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-10-27 00:44:14,505 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-10-27 00:44:14,505 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-10-27 00:44:14,510 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:44:14,510 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:14,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:14,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-27 00:44:14,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:14,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-10-27 00:44:14,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:44:14,573 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-10-27 00:44:14,573 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-10-27 00:44:14,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:14,707 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:44:14,750 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:14,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:14,757 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:14,799 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:44:14,807 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f296038f8e0> has no local changes 2024-10-27 00:44:14,807 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:44:14,817 [ scc.git] DEBUG [detached HEAD 8438822] merge master -Dorg -Ssuccess-only 2024-10-27 00:44:14,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:14,817 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:15,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-10-27 00:44:15,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-10-27 00:44:16,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-10-27 00:44:16,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-10-27 00:44:17,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-10-27 00:44:17,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-27 00:44:18,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:18,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-10-27 00:44:19,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:19,016 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-10-27 00:44:19,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-10-27 00:44:19,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-10-27 00:44:20,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-10-27 00:44:20,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-10-27 00:44:21,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-10-27 00:44:21,290 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:44:21,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-27 00:44:21,290 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:21,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:21,297 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:44:21,304 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:44:21,304 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:44:21,316 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:44:21,325 [ scc.git] DEBUG Already up to date. 2024-10-27 00:44:21,325 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-10-27 00:44:21,850 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-10-27 00:44:21,851 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-10-27 00:44:21,857 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:44:21,857 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:21,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:21,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-27 00:44:21,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:21,880 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-10-27 00:44:21,929 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-10-27 00:44:21,930 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:44:21,933 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-10-27 00:44:21,933 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-10-27 00:44:22,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:22,069 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:44:22,108 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:22,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:22,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:22,153 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:44:22,164 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f33f1c0> has no local changes 2024-10-27 00:44:22,164 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:44:22,177 [ scc.git] DEBUG [detached HEAD 1c99489] merge master -Dorg -Ssuccess-only 2024-10-27 00:44:22,177 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:22,178 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:22,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-10-27 00:44:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-10-27 00:44:23,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-10-27 00:44:23,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-10-27 00:44:24,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-27 00:44:25,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:25,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:26,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-27 00:44:26,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:26,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-10-27 00:44:27,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-10-27 00:44:27,322 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-10-27 00:44:27,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-10-27 00:44:28,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-10-27 00:44:28,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-10-27 00:44:29,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-27 00:44:29,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:30,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-10-27 00:44:30,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:30,680 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-27 00:44:31,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-10-27 00:44:31,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-10-27 00:44:32,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-27 00:44:32,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:33,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-10-27 00:44:33,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:33,533 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-10-27 00:44:33,534 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:44:33,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-27 00:44:33,534 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:33,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:33,542 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:44:33,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:44:33,548 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:44:33,554 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:44:33,561 [ scc.git] DEBUG Already up to date. 2024-10-27 00:44:33,562 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-10-27 00:44:34,019 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-27 00:44:34,020 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-10-27 00:44:34,026 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-10-27 00:44:34,572 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-27 00:44:34,572 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-10-27 00:44:34,578 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-10-27 00:44:35,047 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-10-27 00:44:35,048 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-10-27 00:44:35,053 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:44:35,053 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:35,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:35,059 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-27 00:44:35,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:35,073 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-27 00:44:35,113 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-27 00:44:35,114 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-27 00:44:35,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-27 00:44:35,114 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:44:35,114 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:44:35,121 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-27 00:44:35,129 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-27 00:44:35,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:35,272 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-10-27 00:44:35,281 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-27 00:44:35,287 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-10-27 00:44:35,293 [ scc.config] DEBUG Found github.token 2024-10-27 00:44:35,293 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-10-27 00:44:35,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-27 00:44:35,300 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:35,306 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-27 00:44:35,321 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-10-27 00:44:35,321 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-10-27 00:44:35,321 [ scc.git] DEBUG Auto-merging setup.py 2024-10-27 00:44:35,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-10-27 00:44:35,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-27 00:44:35,321 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-10-27 00:44:35,321 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-10-27 00:44:35,322 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:44:35,323 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:44:35,330 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-27 00:44:35,337 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-10-27 00:44:35,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:35,660 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-10-27 00:44:35,668 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-10-27 00:44:35,674 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-10-27 00:44:35,682 [ scc.config] DEBUG Found github.token 2024-10-27 00:44:35,682 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-10-27 00:44:35,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-27 00:44:35,690 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:35,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-10-27 00:44:35,711 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-10-27 00:44:35,712 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-10-27 00:44:35,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:44:35,715 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-10-27 00:44:35,715 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-10-27 00:44:35,715 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-10-27 00:44:35,715 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-10-27 00:44:35,715 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-10-27 00:44:35,715 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-10-27 00:44:36,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:44:36,047 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:44:36,090 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:44:36,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:44:36,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:44:36,135 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:44:36,143 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f33a880> has no local changes 2024-10-27 00:44:36,144 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:44:36,154 [ scc.git] DEBUG [detached HEAD 9b608f3] merge master -Dorg -Ssuccess-only 2024-10-27 00:44:36,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:44:36,155 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:44:36,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-10-27 00:44:37,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-10-27 00:44:37,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-10-27 00:44:37,621 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:38,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f42e17d64b673b0b34c93dec1b67d60b92445964 HTTP/1.1" 200 None 2024-10-27 00:44:38,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f42e17d64b673b0b34c93dec1b67d60b92445964/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:39,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f42e17d64b673b0b34c93dec1b67d60b92445964/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:39,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/f42e17d64b673b0b34c93dec1b67d60b92445964 HTTP/1.1" 200 None 2024-10-27 00:44:39,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/f42e17d64b673b0b34c93dec1b67d60b92445964?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:39,957 [ scc.repo] DEBUG - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-10-27 00:44:40,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-10-27 00:44:40,392 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:40,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-27 00:44:41,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:41,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:42,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3c170054f782fb9ac230c740c32dceac9e50c618 HTTP/1.1" 200 None 2024-10-27 00:44:42,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3c170054f782fb9ac230c740c32dceac9e50c618?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:42,631 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-27 00:44:43,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-10-27 00:44:43,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-10-27 00:44:43,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-10-27 00:44:44,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-10-27 00:44:44,435 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:44,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-10-27 00:44:45,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:45,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:46,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-10-27 00:44:46,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:46,760 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-27 00:44:47,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-10-27 00:44:47,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-10-27 00:44:48,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-27 00:44:48,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:49,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:49,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-10-27 00:44:49,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:49,956 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-27 00:44:50,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-10-27 00:44:50,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-10-27 00:44:50,887 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:51,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-10-27 00:44:51,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:52,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-10-27 00:44:53,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/339e655bba6f9b7283bd907272429ead97e7ca5d?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:53,227 [ scc.repo] DEBUG - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-10-27 00:44:53,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-10-27 00:44:54,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-10-27 00:44:54,209 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:54,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a HTTP/1.1" 200 None 2024-10-27 00:44:55,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:55,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:44:56,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/79a706d9a7483d812f712ccb3e801e777214f31a HTTP/1.1" 200 None 2024-10-27 00:44:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/79a706d9a7483d812f712ccb3e801e777214f31a?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:44:56,605 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-10-27 00:44:57,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-10-27 00:44:57,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-10-27 00:44:58,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-10-27 00:44:58,211 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:44:58,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5 HTTP/1.1" 200 None 2024-10-27 00:44:59,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:44:59,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:00,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c03b8714a73d425a3ada3eba2dd301bb281628f5 HTTP/1.1" 200 None 2024-10-27 00:45:00,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c03b8714a73d425a3ada3eba2dd301bb281628f5?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:00,510 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-10-27 00:45:00,510 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:45:00,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-27 00:45:00,511 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:00,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:00,517 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:45:00,524 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:45:00,525 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:45:00,531 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:45:00,539 [ scc.git] DEBUG Already up to date. 2024-10-27 00:45:00,540 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-10-27 00:45:01,642 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:01,642 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-10-27 00:45:01,648 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-10-27 00:45:01,945 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:01,945 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-10-27 00:45:01,951 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-10-27 00:45:02,278 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:02,278 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-10-27 00:45:02,285 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-10-27 00:45:02,638 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:02,638 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-10-27 00:45:02,644 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-10-27 00:45:02,938 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:02,938 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-10-27 00:45:02,944 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-10-27 00:45:03,543 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:03,544 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-10-27 00:45:03,549 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-10-27 00:45:04,727 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-10-27 00:45:04,727 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-10-27 00:45:04,733 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:45:04,733 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:04,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:04,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c03b8714a73d425a3ada3eba2dd301bb281628f5' 2024-10-27 00:45:04,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:04,760 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) c03b8714a73d425a3ada3eba2dd301bb281628f5' 2024-10-27 00:45:04,778 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:04,785 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++-- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 42 ++++++++++++++- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 ++++++ 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 +++++++++++++- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++++-- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 62 +++++++++++++++++++++- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++-- 2024-10-27 00:45:04,785 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 56 ++++++++++++++++++- 2024-10-27 00:45:04,785 [ scc.git] DEBUG 10 files changed, 314 insertions(+), 17 deletions(-) 2024-10-27 00:45:04,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:04,924 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...79a706d9a7483d812f712ccb3e801e777214f31a' 2024-10-27 00:45:04,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:04,941 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 79a706d9a7483d812f712ccb3e801e777214f31a' 2024-10-27 00:45:05,550 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-27 00:45:05,550 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-27 00:45:05,550 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-27 00:45:05,551 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:05,558 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 231 ++++++++++++++------- 2024-10-27 00:45:05,558 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-10-27 00:45:05,558 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-10-27 00:45:05,558 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-10-27 00:45:05,558 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-10-27 00:45:05,558 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-10-27 00:45:05,558 [ scc.git] DEBUG 6 files changed, 361 insertions(+), 79 deletions(-) 2024-10-27 00:45:05,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:05,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-10-27 00:45:05,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:05,712 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Add Horizontal and Vertical Image Flipping Functionality) 339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-27 00:45:06,537 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-10-27 00:45:06,538 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:06,545 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 71 +++++++++++++++++++- 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/css/figure.css | 14 ++++ 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/index.html | 1 + 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++- 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/js/views/panel_view.js | 4 +- 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/js/views/right_panel_view.js | 75 +++++++++++++++++++++- 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 10 +-- 2024-10-27 00:45:06,545 [ scc.git] DEBUG src/templates/image_display_options.template.html | 11 +++- 2024-10-27 00:45:06,545 [ scc.git] DEBUG 8 files changed, 178 insertions(+), 17 deletions(-) 2024-10-27 00:45:06,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:06,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-27 00:45:06,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:06,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-10-27 00:45:06,932 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:06,936 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-10-27 00:45:06,936 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-10-27 00:45:07,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:07,064 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-27 00:45:07,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:07,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-27 00:45:07,384 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-27 00:45:07,384 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-10-27 00:45:07,384 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-10-27 00:45:07,384 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-27 00:45:07,384 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2024-10-27 00:45:07,384 [ scc.git] DEBUG Auto-merging src/templates/image_display_options.template.html 2024-10-27 00:45:07,384 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/image_display_options.template.html 2024-10-27 00:45:07,384 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:45:07,385 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:45:07,394 [ scc.git] DEBUG Calling 'git reset --hard 2d328b1d41ce2eb2fa14a4b07535c9ee3b687826' 2024-10-27 00:45:07,405 [ scc.git] DEBUG HEAD is now at 2d328b1d merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 2024-10-27 00:45:07,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:07,543 [ scc.git] DEBUG Calling 'git merge-base 24444fe6bf35af27230c28e466f9819b08853118 d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-10-27 00:45:07,552 [ scc.git] DEBUG Calling 'git diff --name-only 24444fe6bf35af27230c28e466f9819b08853118..24444fe6bf35af27230c28e466f9819b08853118' 2024-10-27 00:45:07,559 [ scc.git] INFO - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - PR #578 Rdornier 'Image outline' - src/js/views/right_panel_view.js - PR #591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - src/js/views/right_panel_view.js - src/templates/image_display_options.template.html --conflicts 2024-10-27 00:45:07,565 [ scc.config] DEBUG Found github.token 2024-10-27 00:45:07,565 [ scc.git] DEBUG Adding comment to issue #595. 2024-10-27 00:45:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 201 2193 2024-10-27 00:45:08,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-27 00:45:08,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:08,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 3c170054f782fb9ac230c740c32dceac9e50c618' 2024-10-27 00:45:08,504 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:08,509 [ scc.git] DEBUG omero_figure/omeroutils.py | 25 +++++++++++++++++++++++++ 2024-10-27 00:45:08,509 [ scc.git] DEBUG 1 file changed, 25 insertions(+) 2024-10-27 00:45:08,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:08,678 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f42e17d64b673b0b34c93dec1b67d60b92445964' 2024-10-27 00:45:08,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:08,697 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Patch label text selection and cue for dragging) f42e17d64b673b0b34c93dec1b67d60b92445964' 2024-10-27 00:45:08,945 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-10-27 00:45:08,945 [ scc.git] DEBUG Auto-merging src/index.html 2024-10-27 00:45:08,945 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-10-27 00:45:08,947 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:08,954 [ scc.git] DEBUG src/css/figure.css | 12 ++++++++++-- 2024-10-27 00:45:08,954 [ scc.git] DEBUG src/index.html | 2 +- 2024-10-27 00:45:08,954 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 +++- 2024-10-27 00:45:08,954 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 7 ++++--- 2024-10-27 00:45:08,954 [ scc.git] DEBUG 4 files changed, 18 insertions(+), 7 deletions(-) 2024-10-27 00:45:09,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:09,098 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:45:09,144 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:09,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:09,152 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:45:09,194 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:45:09,204 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f347b20> has no local changes 2024-10-27 00:45:09,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:45:09,218 [ scc.git] DEBUG [detached HEAD 237fd463] merge master -Dorg -Ssuccess-only 2024-10-27 00:45:09,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:45:09,219 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:45:09,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-10-27 00:45:10,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-10-27 00:45:10,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-10-27 00:45:11,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-27 00:45:11,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:12,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-10-27 00:45:12,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:12,588 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-10-27 00:45:12,588 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:45:12,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-27 00:45:12,588 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:12,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:12,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:45:12,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:45:12,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:45:12,609 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:45:12,615 [ scc.git] DEBUG Already up to date. 2024-10-27 00:45:12,615 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-10-27 00:45:13,146 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-10-27 00:45:13,147 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-10-27 00:45:13,152 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:45:13,152 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:13,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:13,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-27 00:45:13,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:13,172 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-10-27 00:45:13,469 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-10-27 00:45:13,469 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:13,473 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-10-27 00:45:13,473 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-10-27 00:45:13,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:13,608 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:45:13,656 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:13,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:13,664 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:45:13,705 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:45:13,712 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f30b9d0> has no local changes 2024-10-27 00:45:13,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:45:13,722 [ scc.git] DEBUG [detached HEAD 8b7ed9d] merge master -Dorg -Ssuccess-only 2024-10-27 00:45:13,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:45:13,723 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:45:14,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-10-27 00:45:14,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-10-27 00:45:14,551 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:45:15,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-27 00:45:15,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:16,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:16,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-10-27 00:45:17,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:17,020 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-27 00:45:17,020 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:45:17,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-27 00:45:17,020 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:17,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:17,026 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:45:17,031 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:45:17,031 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:45:17,036 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:45:17,042 [ scc.git] DEBUG Already up to date. 2024-10-27 00:45:17,042 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-10-27 00:45:17,351 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-10-27 00:45:17,351 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-10-27 00:45:17,356 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:45:17,356 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:17,356 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:17,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-27 00:45:17,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:17,374 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-10-27 00:45:17,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:17,390 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-10-27 00:45:17,390 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-10-27 00:45:17,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:17,526 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:45:17,571 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:17,572 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:17,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:45:17,618 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:45:17,627 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f2e6dc0> has no local changes 2024-10-27 00:45:17,628 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:45:17,639 [ scc.git] DEBUG [detached HEAD 7b6c57c] merge master -Dorg -Ssuccess-only 2024-10-27 00:45:17,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:45:17,639 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:45:18,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-10-27 00:45:18,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488 HTTP/1.1" 200 None 2024-10-27 00:45:19,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 200 None 2024-10-27 00:45:19,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427 HTTP/1.1" 200 None 2024-10-27 00:45:19,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:20,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:20,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/767995856fdb93be4060423195f3f604aa6e4427 HTTP/1.1" 200 None 2024-10-27 00:45:21,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/767995856fdb93be4060423195f3f604aa6e4427?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:21,238 [ scc.repo] DEBUG - PR 488 will-moore 'Mobile layout' 2024-10-27 00:45:21,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/486 HTTP/1.1" 200 None 2024-10-27 00:45:22,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-10-27 00:45:22,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484 HTTP/1.1" 200 None 2024-10-27 00:45:23,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/484/comments HTTP/1.1" 200 None 2024-10-27 00:45:23,047 [ scc.repo] DEBUG # ... Include label: include 2024-10-27 00:45:23,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-27 00:45:24,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:24,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:25,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81 HTTP/1.1" 200 None 2024-10-27 00:45:25,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/233e0442b0f738b5aeffd80bd4c7549ea9d5cc81?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:25,455 [ scc.repo] DEBUG - PR 484 barrettMCW 'improved mirroring' 2024-10-27 00:45:25,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/483 HTTP/1.1" 200 None 2024-10-27 00:45:25,907 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:45:26,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-27 00:45:26,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:27,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:27,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/384771c9fd794e2b472a35dca65e6ed96be98c4d HTTP/1.1" 200 None 2024-10-27 00:45:28,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/384771c9fd794e2b472a35dca65e6ed96be98c4d?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:28,402 [ scc.repo] DEBUG - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-27 00:45:28,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482 HTTP/1.1" 200 None 2024-10-27 00:45:29,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/482/comments HTTP/1.1" 200 None 2024-10-27 00:45:29,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-27 00:45:30,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:30,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:31,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b HTTP/1.1" 200 None 2024-10-27 00:45:31,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:31,611 [ scc.repo] DEBUG - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-27 00:45:32,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/478 HTTP/1.1" 200 None 2024-10-27 00:45:32,050 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:45:32,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-27 00:45:33,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:33,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:34,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/91cd18bb57d92337a1fb0c60a10824e5d057ee11 HTTP/1.1" 200 None 2024-10-27 00:45:34,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/91cd18bb57d92337a1fb0c60a10824e5d057ee11?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:34,474 [ scc.repo] DEBUG - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-27 00:45:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/477 HTTP/1.1" 200 None 2024-10-27 00:45:34,921 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:45:35,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-27 00:45:35,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:36,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:36,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5 HTTP/1.1" 200 None 2024-10-27 00:45:37,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/274749c0dfc8162eaf89cdb16a9ef23195d5d5b5?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:37,221 [ scc.repo] DEBUG - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-27 00:45:37,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-10-27 00:45:38,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-10-27 00:45:38,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-27 00:45:39,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:39,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:39,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-10-27 00:45:40,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:40,340 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-27 00:45:40,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-10-27 00:45:41,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-10-27 00:45:41,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-27 00:45:42,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:42,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:45:43,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-10-27 00:45:43,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:43,486 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-10-27 00:45:43,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-10-27 00:45:44,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-10-27 00:45:44,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-27 00:45:45,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:45:45,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-10-27 00:45:46,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:45:46,274 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-10-27 00:45:46,275 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:45:46,275 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-27 00:45:46,275 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:46,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:46,282 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:45:46,287 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:45:46,287 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:45:46,452 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:45:46,458 [ scc.git] DEBUG Already up to date. 2024-10-27 00:45:46,458 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-10-27 00:45:47,149 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:47,149 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-10-27 00:45:47,154 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-10-27 00:45:48,955 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:48,955 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-10-27 00:45:48,961 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-10-27 00:45:49,433 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:49,433 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-10-27 00:45:49,439 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-10-27 00:45:49,721 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:49,721 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-10-27 00:45:49,727 [ scc.git] DEBUG Calling 'git fetch origin pull/478/head' 2024-10-27 00:45:50,030 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:50,030 [ scc.git] DEBUG * branch refs/pull/478/head -> FETCH_HEAD 2024-10-27 00:45:50,036 [ scc.git] DEBUG Calling 'git fetch origin pull/482/head' 2024-10-27 00:45:50,663 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:50,663 [ scc.git] DEBUG * branch refs/pull/482/head -> FETCH_HEAD 2024-10-27 00:45:50,669 [ scc.git] DEBUG Calling 'git fetch origin pull/483/head' 2024-10-27 00:45:50,975 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:50,976 [ scc.git] DEBUG * branch refs/pull/483/head -> FETCH_HEAD 2024-10-27 00:45:50,981 [ scc.git] DEBUG Calling 'git fetch origin pull/484/head' 2024-10-27 00:45:52,696 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:52,697 [ scc.git] DEBUG * branch refs/pull/484/head -> FETCH_HEAD 2024-10-27 00:45:52,702 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head' 2024-10-27 00:45:53,592 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-10-27 00:45:53,592 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD 2024-10-27 00:45:53,598 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:45:53,598 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:53,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:53,605 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-27 00:45:53,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:53,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-10-27 00:45:54,059 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-27 00:45:54,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:54,064 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-10-27 00:45:54,064 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-10-27 00:45:54,064 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-10-27 00:45:54,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:54,201 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-27 00:45:54,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:54,214 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-10-27 00:45:54,490 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-10-27 00:45:54,490 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-27 00:45:54,490 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-27 00:45:54,490 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-10-27 00:45:54,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:54,496 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-10-27 00:45:54,496 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-10-27 00:45:54,496 [ scc.git] DEBUG src/app/header.html | 5 + 2024-10-27 00:45:54,496 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-10-27 00:45:54,496 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-10-27 00:45:54,496 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-10-27 00:45:54,496 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-10-27 00:45:54,496 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-10-27 00:45:54,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:54,628 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-27 00:45:54,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:54,641 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-10-27 00:45:54,753 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-10-27 00:45:54,753 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:54,757 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-10-27 00:45:54,757 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-10-27 00:45:54,757 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-10-27 00:45:55,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:55,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-27 00:45:55,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:55,074 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Bump ws and socket.io) 274749c0dfc8162eaf89cdb16a9ef23195d5d5b5' 2024-10-27 00:45:55,170 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:55,180 [ scc.git] DEBUG package-lock.json | 108 ++++++++++++++++++++++++++++++++++-------------------- 2024-10-27 00:45:55,180 [ scc.git] DEBUG 1 file changed, 68 insertions(+), 40 deletions(-) 2024-10-27 00:45:55,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:55,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-27 00:45:55,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:55,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 478 (Bump socket.io from 4.6.1 to 4.7.5) 91cd18bb57d92337a1fb0c60a10824e5d057ee11' 2024-10-27 00:45:55,601 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-27 00:45:55,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:55,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:55,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-27 00:45:55,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:55,783 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 482 (Support ?collapse_left/right and ?full_page=true) 7e1dd40572c8cc9a1bdc4cb1ff58c82367c89b1b' 2024-10-27 00:45:56,535 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-10-27 00:45:56,536 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-10-27 00:45:56,536 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-10-27 00:45:56,536 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/app/context.js | 12 +++++++++++ 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/app/index.js | 5 +---- 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/model/image_info.js | 1 - 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/utils/constants.js | 5 ++++- 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/utils/ui.js | 44 ++++++++++++++++++++++---------------- 2024-10-27 00:45:56,541 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 1 - 2024-10-27 00:45:56,541 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 26 deletions(-) 2024-10-27 00:45:56,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:56,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-27 00:45:56,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:56,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 483 (Bump webpack from 5.82.0 to 5.94.0) 384771c9fd794e2b472a35dca65e6ed96be98c4d' 2024-10-27 00:45:57,034 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-27 00:45:57,035 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:57,045 [ scc.git] DEBUG package-lock.json | 686 ++++++++++++++++++++++++++---------------------------- 2024-10-27 00:45:57,046 [ scc.git] DEBUG package.json | 2 +- 2024-10-27 00:45:57,046 [ scc.git] DEBUG 2 files changed, 329 insertions(+), 359 deletions(-) 2024-10-27 00:45:57,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:57,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-27 00:45:57,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:57,197 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 233e0442b0f738b5aeffd80bd4c7549ea9d5cc81' 2024-10-27 00:45:57,267 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:45:57,270 [ scc.git] DEBUG src/viewers/viewer/controls/Mirror.js | 235 ++++++++++++++++------------------ 2024-10-27 00:45:57,270 [ scc.git] DEBUG 1 file changed, 111 insertions(+), 124 deletions(-) 2024-10-27 00:45:57,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:57,568 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...767995856fdb93be4060423195f3f604aa6e4427' 2024-10-27 00:45:57,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:57,583 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Mobile layout) 767995856fdb93be4060423195f3f604aa6e4427' 2024-10-27 00:45:57,736 [ scc.git] DEBUG Auto-merging src/utils/ui.js 2024-10-27 00:45:57,736 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/utils/ui.js 2024-10-27 00:45:57,737 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:45:57,737 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:45:57,744 [ scc.git] DEBUG Calling 'git reset --hard 8164db76d0099c38444409c2e26705a849d9af33' 2024-10-27 00:45:57,752 [ scc.git] DEBUG HEAD is now at 8164db7 merge master -Dorg -Ssuccess-only: PR 484 (improved mirroring) 2024-10-27 00:45:57,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:45:57,944 [ scc.git] DEBUG Calling 'git merge-base a8f380fabfd839b946e5a5f613f1fce07abb3815 767995856fdb93be4060423195f3f604aa6e4427' 2024-10-27 00:45:57,951 [ scc.git] DEBUG Calling 'git diff --name-only a8f380fabfd839b946e5a5f613f1fce07abb3815..a8f380fabfd839b946e5a5f613f1fce07abb3815' 2024-10-27 00:45:57,957 [ scc.git] INFO - PR 488 will-moore 'Mobile layout' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - PR #482 will-moore 'Support ?collapse_left/right and ?full_page=true' - src/utils/ui.js --conflicts 2024-10-27 00:45:57,961 [ scc.config] DEBUG Found github.token 2024-10-27 00:45:57,962 [ scc.git] DEBUG Adding comment to issue #488. 2024-10-27 00:45:58,687 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 201 2037 2024-10-27 00:45:58,688 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:45:58,733 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:45:58,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:45:58,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:45:58,780 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:45:58,789 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295f300820> has no local changes 2024-10-27 00:45:58,789 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Conflicting PRs (not included): - PR 488 will-moore 'Mobile layout' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:45:58,798 [ scc.git] DEBUG [detached HEAD b3583de] merge master -Dorg -Ssuccess-only 2024-10-27 00:45:58,799 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:45:58,799 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:45:59,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-10-27 00:45:59,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/87 HTTP/1.1" 200 None 2024-10-27 00:46:00,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/87/comments HTTP/1.1" 200 None 2024-10-27 00:46:00,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a HTTP/1.1" 200 None 2024-10-27 00:46:01,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:01,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c9642f31154cd66dd416599d485409543b18618a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:46:02,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86 HTTP/1.1" 200 None 2024-10-27 00:46:02,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/86/comments HTTP/1.1" 200 None 2024-10-27 00:46:02,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b HTTP/1.1" 200 None 2024-10-27 00:46:03,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:03,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/c698c730a10c08fde992fdc12bc1c2fab329957b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:46:04,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-10-27 00:46:04,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-10-27 00:46:05,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-27 00:46:05,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:06,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-10-27 00:46:06,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:06,732 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-10-27 00:46:06,732 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:06,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-27 00:46:06,732 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:06,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:06,738 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:06,743 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:06,744 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:06,749 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:06,754 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:06,755 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-10-27 00:46:07,047 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-10-27 00:46:07,048 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-10-27 00:46:07,051 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:07,052 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:07,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:07,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-27 00:46:07,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:07,068 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-10-27 00:46:07,078 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:07,080 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-10-27 00:46:07,080 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-10-27 00:46:07,080 [ scc.git] DEBUG requirements.txt | 2 +- 2024-10-27 00:46:07,080 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-10-27 00:46:07,080 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-10-27 00:46:07,080 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-10-27 00:46:07,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:07,213 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:07,250 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:07,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:07,255 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:07,292 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:07,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295e2b6370> has no local changes 2024-10-27 00:46:07,299 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 87 will-moore 'Tests dont use omero utils' (status: failure) - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:07,307 [ scc.git] DEBUG [detached HEAD 62bf5d4] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:07,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:07,307 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:07,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-10-27 00:46:08,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86 HTTP/1.1" 200 None 2024-10-27 00:46:08,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/86/comments HTTP/1.1" 200 None 2024-10-27 00:46:09,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-27 00:46:09,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:09,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/d222577494040c63f4ce3c1a266d43257c9f1c61 HTTP/1.1" 200 None 2024-10-27 00:46:10,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/d222577494040c63f4ce3c1a266d43257c9f1c61?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:10,425 [ scc.repo] DEBUG - PR 86 dominikl 'Add tablename option' 2024-10-27 00:46:10,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-10-27 00:46:11,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-10-27 00:46:11,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-27 00:46:12,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:12,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-10-27 00:46:13,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:13,214 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-27 00:46:13,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-10-27 00:46:14,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-10-27 00:46:14,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-27 00:46:15,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:15,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-10-27 00:46:16,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:16,034 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-27 00:46:16,034 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:16,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-27 00:46:16,034 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:16,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:16,041 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:16,047 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:16,047 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:16,053 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:16,059 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:16,060 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-10-27 00:46:16,518 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-27 00:46:16,518 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-10-27 00:46:16,524 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-10-27 00:46:17,086 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-27 00:46:17,087 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-10-27 00:46:17,092 [ scc.git] DEBUG Calling 'git fetch origin pull/86/head' 2024-10-27 00:46:17,377 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-10-27 00:46:17,378 [ scc.git] DEBUG * branch refs/pull/86/head -> FETCH_HEAD 2024-10-27 00:46:17,383 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:17,383 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:17,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:17,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-27 00:46:17,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:17,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-27 00:46:17,458 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-10-27 00:46:17,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-10-27 00:46:17,458 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-27 00:46:17,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-27 00:46:17,458 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:46:17,459 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:46:17,466 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-27 00:46:17,475 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-27 00:46:17,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:17,604 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-10-27 00:46:17,613 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-27 00:46:17,622 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-10-27 00:46:17,629 [ scc.config] DEBUG Found github.token 2024-10-27 00:46:17,629 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-10-27 00:46:17,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-27 00:46:17,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:17,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-27 00:46:17,672 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-10-27 00:46:17,672 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-10-27 00:46:17,672 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-10-27 00:46:17,672 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:46:17,673 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:46:17,681 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-27 00:46:17,690 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-10-27 00:46:18,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:18,007 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-10-27 00:46:18,015 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-10-27 00:46:18,022 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-10-27 00:46:18,027 [ scc.config] DEBUG Found github.token 2024-10-27 00:46:18,027 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-10-27 00:46:18,028 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-27 00:46:18,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:18,039 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 86 (Add tablename option) d222577494040c63f4ce3c1a266d43257c9f1c61' 2024-10-27 00:46:18,184 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:18,188 [ scc.git] DEBUG src/omero_metadata/cli.py | 10 ++++++++-- 2024-10-27 00:46:18,188 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 2 deletions(-) 2024-10-27 00:46:18,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:18,386 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:18,426 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:18,426 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:18,432 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:18,469 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:18,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295e2aeee0> has no local changes 2024-10-27 00:46:18,477 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:18,486 [ scc.git] DEBUG [detached HEAD fcac1ca] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:18,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:18,486 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:18,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-10-27 00:46:19,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-10-27 00:46:19,332 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:46:19,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-27 00:46:20,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:20,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:46:21,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-10-27 00:46:21,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:21,879 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-27 00:46:22,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-10-27 00:46:22,332 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:46:22,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-27 00:46:23,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:23,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:46:24,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-10-27 00:46:24,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:24,652 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-27 00:46:25,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-10-27 00:46:25,123 [ scc.repo] DEBUG # ... Include label: dependencies 2024-10-27 00:46:25,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-27 00:46:26,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:26,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:46:27,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-10-27 00:46:27,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:27,603 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-27 00:46:28,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-10-27 00:46:28,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-10-27 00:46:28,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-10-27 00:46:29,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-10-27 00:46:29,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-10-27 00:46:30,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-10-27 00:46:30,258 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:30,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-27 00:46:30,259 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:30,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:30,266 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:30,272 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:30,272 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:30,279 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:30,287 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:30,287 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-10-27 00:46:30,618 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-27 00:46:30,618 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-10-27 00:46:30,623 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-10-27 00:46:30,926 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-27 00:46:30,926 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-10-27 00:46:30,931 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-10-27 00:46:31,236 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-10-27 00:46:31,236 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-10-27 00:46:31,245 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:31,246 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:31,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:31,254 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-27 00:46:31,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:31,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-10-27 00:46:31,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:31,282 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-10-27 00:46:31,282 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-10-27 00:46:31,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:31,417 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-27 00:46:31,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:31,430 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-10-27 00:46:31,553 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-27 00:46:31,554 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:31,558 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-10-27 00:46:31,558 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-10-27 00:46:31,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:31,797 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-27 00:46:31,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:31,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-10-27 00:46:31,822 [ scc.git] DEBUG Auto-merging package-lock.json 2024-10-27 00:46:31,823 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:31,826 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-10-27 00:46:31,826 [ scc.git] DEBUG package.json | 2 +- 2024-10-27 00:46:31,827 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-10-27 00:46:32,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:32,177 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:32,216 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:32,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:32,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:32,263 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:32,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295e2bebe0> has no local changes 2024-10-27 00:46:32,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:32,280 [ scc.git] DEBUG [detached HEAD 51870c0] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:32,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:32,281 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:32,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-10-27 00:46:33,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-10-27 00:46:33,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-27 00:46:34,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:34,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-10-27 00:46:35,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:35,006 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-10-27 00:46:35,006 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:35,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-27 00:46:35,006 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:35,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:35,015 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:35,021 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:35,021 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:35,027 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:35,033 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:35,033 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-27 00:46:35,337 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-10-27 00:46:35,338 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-27 00:46:35,341 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:35,341 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:35,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:35,347 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-27 00:46:35,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:35,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-10-27 00:46:35,367 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:35,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:35,503 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:35,544 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:35,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:35,550 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:35,590 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:35,597 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c283fa0> has no local changes 2024-10-27 00:46:35,597 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:35,606 [ scc.git] DEBUG [detached HEAD 5e9537c] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:35,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:35,606 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:35,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-10-27 00:46:36,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-10-27 00:46:36,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-10-27 00:46:37,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-10-27 00:46:37,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-27 00:46:38,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:38,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-10-27 00:46:39,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:39,140 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-27 00:46:39,140 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:39,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-27 00:46:39,141 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:39,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:39,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:39,152 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:39,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:39,159 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:39,164 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:39,165 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-10-27 00:46:39,611 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-10-27 00:46:39,612 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-10-27 00:46:39,616 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:39,616 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:39,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:39,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-27 00:46:39,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:39,633 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-10-27 00:46:39,643 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-10-27 00:46:39,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:39,647 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-10-27 00:46:39,647 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-10-27 00:46:39,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:39,775 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:39,816 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:39,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:39,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:39,862 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:39,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c252c70> has no local changes 2024-10-27 00:46:39,868 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:39,876 [ scc.git] DEBUG [detached HEAD 18562a4] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:39,876 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:39,876 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-10-27 00:46:40,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-10-27 00:46:41,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-10-27 00:46:41,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-27 00:46:42,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:42,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-10-27 00:46:43,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:43,170 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-27 00:46:43,170 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:43,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-27 00:46:43,170 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:43,170 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:43,177 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:43,182 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:43,182 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:43,189 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:43,194 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:43,195 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-10-27 00:46:43,532 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-10-27 00:46:43,533 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-10-27 00:46:43,538 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:43,538 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:43,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:43,544 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-27 00:46:43,551 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:43,557 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-27 00:46:43,723 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG Auto-merging setup.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-10-27 00:46:43,723 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:46:43,723 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:46:43,730 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-27 00:46:43,736 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-10-27 00:46:43,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:43,867 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-10-27 00:46:43,874 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-10-27 00:46:43,879 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py - omero_signup/views.py --conflicts 2024-10-27 00:46:43,884 [ scc.config] DEBUG Found github.token 2024-10-27 00:46:43,884 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-10-27 00:46:43,885 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:43,923 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:43,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:43,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:43,971 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:43,979 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c27ae80> has no local changes 2024-10-27 00:46:43,979 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:43,991 [ scc.git] DEBUG [detached HEAD face068] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:43,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:43,995 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:44,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-10-27 00:46:44,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-10-27 00:46:45,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-10-27 00:46:45,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-27 00:46:46,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:46,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-10-27 00:46:47,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:47,129 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-27 00:46:47,129 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:47,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-27 00:46:47,129 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:47,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:47,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:47,143 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:47,143 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:47,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:47,156 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:47,156 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-10-27 00:46:48,159 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-10-27 00:46:48,159 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-10-27 00:46:48,164 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:48,164 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:48,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-10-27 00:46:48,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-10-27 00:46:48,201 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:46:48,204 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-10-27 00:46:48,205 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-10-27 00:46:48,207 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-10-27 00:46:48,207 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-10-27 00:46:48,208 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-10-27 00:46:48,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:48,368 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:48,414 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:48,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:48,467 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:48,475 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c2835b0> has no local changes 2024-10-27 00:46:48,475 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:48,486 [ scc.git] DEBUG [detached HEAD 3a82556] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:48,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:48,487 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:48,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-10-27 00:46:48,772 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:48,772 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-27 00:46:48,772 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:48,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,781 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:48,788 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:48,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:48,795 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:48,803 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:48,803 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:48,803 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:48,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,809 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:48,865 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:48,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:48,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:48,916 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:48,924 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c23c2e0> has no local changes 2024-10-27 00:46:48,924 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:48,934 [ scc.git] DEBUG [detached HEAD 6c46305] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:48,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:48,935 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:49,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-10-27 00:46:49,221 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:49,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-27 00:46:49,221 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:49,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:49,229 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:49,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:49,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:49,243 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:49,249 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:49,250 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:49,250 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:49,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:49,254 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:49,292 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:49,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:49,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:49,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:49,340 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c1e6100> has no local changes 2024-10-27 00:46:49,340 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:49,348 [ scc.git] DEBUG [detached HEAD 7980aba] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:49,348 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:49,348 [ scc.git] INFO Overriding base-branch from master to main 2024-10-27 00:46:49,348 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:49,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-10-27 00:46:50,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-10-27 00:46:50,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-10-27 00:46:51,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-10-27 00:46:51,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-27 00:46:51,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:52,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-10-27 00:46:52,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:52,883 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-27 00:46:52,883 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:52,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-27 00:46:52,883 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:52,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:52,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-10-27 00:46:52,895 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:52,896 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-10-27 00:46:52,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-10-27 00:46:52,908 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:52,909 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-10-27 00:46:53,252 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-10-27 00:46:53,253 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-10-27 00:46:53,260 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:53,261 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:53,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:53,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-27 00:46:53,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:53,296 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-27 00:46:53,360 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-10-27 00:46:53,360 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-10-27 00:46:53,360 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:46:53,361 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:46:53,371 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-27 00:46:53,383 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-10-27 00:46:53,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:53,513 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-10-27 00:46:53,521 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-10-27 00:46:53,527 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-10-27 00:46:53,532 [ scc.config] DEBUG Found github.token 2024-10-27 00:46:53,533 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-10-27 00:46:53,533 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:53,584 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:53,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:53,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:53,630 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:53,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c237eb0> has no local changes 2024-10-27 00:46:53,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:53,649 [ scc.git] DEBUG [detached HEAD 1842a68] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:53,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:53,650 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:53,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-10-27 00:46:53,910 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:53,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-27 00:46:53,911 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:53,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:53,922 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:53,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:53,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:53,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:53,949 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:53,950 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:53,950 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:53,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:53,955 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:53,997 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:53,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:54,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:54,042 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:54,049 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c1e6b80> has no local changes 2024-10-27 00:46:54,049 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:54,058 [ scc.git] DEBUG [detached HEAD ccdb0f1] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:54,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:54,059 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:54,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-10-27 00:46:54,318 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:54,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-27 00:46:54,318 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:54,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:54,326 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:54,332 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:54,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:54,338 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:54,345 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:54,346 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:54,346 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:54,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:54,352 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:54,400 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:54,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:54,410 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:54,458 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:54,466 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c1cd520> has no local changes 2024-10-27 00:46:54,466 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:54,475 [ scc.git] DEBUG [detached HEAD 75f42e6] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:54,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:54,475 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:54,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-10-27 00:46:55,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-10-27 00:46:55,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-10-27 00:46:56,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-27 00:46:56,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:46:57,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-10-27 00:46:57,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:46:57,499 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-10-27 00:46:57,500 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:46:57,500 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-27 00:46:57,500 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:57,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:57,509 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-10-27 00:46:57,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:46:57,517 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-10-27 00:46:57,526 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-10-27 00:46:57,533 [ scc.git] DEBUG Already up to date. 2024-10-27 00:46:57,534 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-10-27 00:46:57,889 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-10-27 00:46:57,889 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-10-27 00:46:57,896 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:46:57,896 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:57,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:57,904 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-27 00:46:57,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:57,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-27 00:46:58,041 [ scc.git] DEBUG Auto-merging Dockerfile 2024-10-27 00:46:58,041 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-10-27 00:46:58,041 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:46:58,042 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:46:58,052 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-27 00:46:58,063 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-10-27 00:46:58,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:46:58,210 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-10-27 00:46:58,222 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-10-27 00:46:58,234 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-10-27 00:46:58,243 [ scc.config] DEBUG Found github.token 2024-10-27 00:46:58,243 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-10-27 00:46:58,244 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:46:58,292 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:46:58,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:46:58,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:46:58,343 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:46:58,350 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c1d9fd0> has no local changes 2024-10-27 00:46:58,351 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:46:58,361 [ scc.git] DEBUG [detached HEAD 3e1c4bc] merge master -Dorg -Ssuccess-only 2024-10-27 00:46:58,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:46:58,362 [ scc.git] INFO Overriding base-branch from master to develop 2024-10-27 00:46:58,362 [ scc.repo] DEBUG ## PRs found: 2024-10-27 00:46:58,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-10-27 00:46:59,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-10-27 00:46:59,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-10-27 00:47:00,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-27 00:47:00,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:47:00,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-10-27 00:47:01,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-10-27 00:47:01,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:47:01,757 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-27 00:47:02,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-10-27 00:47:02,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-10-27 00:47:03,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-10-27 00:47:03,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-10-27 00:47:04,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-10-27 00:47:04,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-10-27 00:47:04,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-27 00:47:05,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-10-27 00:47:05,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-10-27 00:47:06,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-10-27 00:47:06,208 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-27 00:47:06,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-10-27 00:47:07,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-10-27 00:47:07,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-10-27 00:47:08,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-10-27 00:47:08,089 [ scc.repo] DEBUG ## Branches found: 2024-10-27 00:47:08,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-27 00:47:08,089 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:47:08,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:47:08,095 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-10-27 00:47:08,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-10-27 00:47:08,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-10-27 00:47:08,105 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-10-27 00:47:08,111 [ scc.git] DEBUG Already up to date. 2024-10-27 00:47:08,112 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-10-27 00:47:08,664 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-27 00:47:08,664 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-10-27 00:47:08,670 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-10-27 00:47:09,273 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-10-27 00:47:09,274 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-10-27 00:47:09,279 [ scc.git] DEBUG ## Unique users: [] 2024-10-27 00:47:09,279 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:47:09,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:47:09,286 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-27 00:47:09,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:47:09,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-27 00:47:09,392 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-10-27 00:47:09,392 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-10-27 00:47:09,392 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-10-27 00:47:09,393 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-10-27 00:47:09,399 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-27 00:47:09,406 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-10-27 00:47:09,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:09,545 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-10-27 00:47:09,553 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-10-27 00:47:09,559 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-10-27 00:47:09,563 [ scc.config] DEBUG Found github.token 2024-10-27 00:47:09,564 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-10-27 00:47:09,564 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-27 00:47:09,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:47:09,577 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-10-27 00:47:09,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-10-27 00:47:09,605 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-10-27 00:47:09,605 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-10-27 00:47:09,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:09,935 [ scc.git] DEBUG Calling 'git submodule update' 2024-10-27 00:47:09,974 [ scc.git] DEBUG Get sha1 of %s 2024-10-27 00:47:09,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-10-27 00:47:09,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:47:10,030 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:47:10,038 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f295c147520> has no local changes 2024-10-27 00:47:10,038 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:47:10,047 [ scc.git] DEBUG [detached HEAD f2aa9eb] merge master -Dorg -Ssuccess-only 2024-10-27 00:47:10,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:10,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-10-27 00:47:10,123 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-10-27 00:47:10,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:10,326 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-10-27 00:47:10,331 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-10-27 00:47:10,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:10,708 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-10-27 00:47:10,712 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-10-27 00:47:11,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:11,100 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-10-27 00:47:11,104 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-10-27 00:47:11,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:11,484 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-10-27 00:47:11,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:11,872 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-10-27 00:47:11,877 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-10-27 00:47:12,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:12,246 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-10-27 00:47:12,251 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-10-27 00:47:12,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:12,671 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-10-27 00:47:12,675 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-10-27 00:47:13,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:13,046 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-10-27 00:47:13,050 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-10-27 00:47:13,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:13,436 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-10-27 00:47:13,440 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-10-27 00:47:13,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:13,812 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-10-27 00:47:13,817 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-10-27 00:47:14,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:14,233 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-10-27 00:47:14,237 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-10-27 00:47:14,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:14,614 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-10-27 00:47:14,619 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-10-27 00:47:14,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:14,999 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-10-27 00:47:15,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:15,375 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-10-27 00:47:15,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:15,748 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-10-27 00:47:15,753 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-10-27 00:47:16,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:16,146 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-10-27 00:47:16,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:16,539 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-10-27 00:47:16,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:16,913 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-10-27 00:47:16,917 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-10-27 00:47:17,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:17,286 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-10-27 00:47:17,290 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-10-27 00:47:17,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:17,708 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-10-27 00:47:17,713 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-10-27 00:47:18,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:18,095 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-10-27 00:47:18,101 [ scc.config] DEBUG Found submodule.scripts.url 2024-10-27 00:47:18,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-10-27 00:47:18,479 [ scc.config] DEBUG Found submodule.scripts.branch 2024-10-27 00:47:18,480 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-10-27 00:47:18,561 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f29608cf8b0> has local changes 2024-10-27 00:47:18,561 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' - PR 484 barrettMCW 'improved mirroring' Conflicting PRs (not included): - PR 488 will-moore 'Mobile layout' Repository: ome/omero-mapr Excluded PRs: - PR 87 will-moore 'Tests dont use omero utils' (status: failure) - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 86 dominikl 'Add tablename option' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/225/)' 2024-10-27 00:47:18,576 [ scc.git] DEBUG [detached HEAD 0fac461] merge master -Dorg -Ssuccess-only 2024-10-27 00:47:18,576 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-10-27 00:47:18,576 [ scc.merge] INFO Repository: ome/omero-plugins 2024-10-27 00:47:18,576 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,576 [ scc.merge] INFO 2024-10-27 00:47:18,576 [ scc.merge] INFO 2024-10-27 00:47:18,576 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-10-27 00:47:18,576 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,576 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-10-27 00:47:18,577 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-10-27 00:47:18,577 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-10-27 00:47:18,577 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-10-27 00:47:18,577 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-10-27 00:47:18,577 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-27 00:47:18,577 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-10-27 00:47:18,577 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-10-27 00:47:18,577 [ scc.merge] INFO 2024-10-27 00:47:18,577 [ scc.merge] INFO Repository: ome/omero-figure 2024-10-27 00:47:18,577 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' (user: Tom-TBT) 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-10-27 00:47:18,578 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-10-27 00:47:18,578 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Repository: ome/omero-gallery 2024-10-27 00:47:18,578 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,578 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-10-27 00:47:18,578 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' (user: Tom-TBT) 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' (user: Tom-TBT) 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-10-27 00:47:18,578 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-10-27 00:47:18,578 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,578 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 478 dependabot[bot] 'Bump socket.io from 4.6.1 to 4.7.5' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 483 dependabot[bot] 'Bump webpack from 5.82.0 to 5.94.0' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout' 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Repository: ome/omero-mapr 2024-10-27 00:47:18,579 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 87 will-moore 'Tests dont use omero utils' (status: failure) 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 86 will-moore 'fix return of default favicon if not found' (status: failure) 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-10-27 00:47:18,579 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Repository: ome/omero-metadata 2024-10-27 00:47:18,579 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 86 dominikl 'Add tablename option' 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-10-27 00:47:18,579 [ scc.merge] INFO 2024-10-27 00:47:18,579 [ scc.merge] INFO Repository: ome/omero-parade 2024-10-27 00:47:18,579 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-10-27 00:47:18,579 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Repository: ome/omero-rois 2024-10-27 00:47:18,580 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Repository: ome/omero-signup 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,580 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,580 [ scc.merge] INFO Repository: ome/omero-upload 2024-10-27 00:47:18,580 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,580 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-10-27 00:47:18,581 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Repository: ome/scripts 2024-10-27 00:47:18,581 [ scc.merge] INFO Excluded PRs: 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-10-27 00:47:18,581 [ scc.merge] INFO Already up to date. 2024-10-27 00:47:18,581 [ scc.merge] INFO 2024-10-27 00:47:18,581 [ scc.merge] INFO Merged PRs: 2024-10-27 00:47:18,581 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-10-27 00:47:18,582 [ scc.merge] INFO 2024-10-27 00:47:18,582 [ scc.merge] INFO Conflicting PRs (not included): 2024-10-27 00:47:18,582 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-10-27 00:47:18,582 [ scc.merge] INFO 2024-10-27 00:47:18,582 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-10-27 00:47:18,582 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-10-27 00:47:18,588 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-10-27 00:47:18,594 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-10-27 00:47:18,600 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-10-27 00:47:18,605 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-10-27 00:47:18,610 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-10-27 00:47:18,616 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-10-27 00:47:18,621 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-10-27 00:47:18,627 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-10-27 00:47:18,631 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-10-27 00:47:18,636 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-10-27 00:47:18,640 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-10-27 00:47:18,645 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-10-27 00:47:18,649 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-10-27 00:47:18,654 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-10-27 00:47:18,659 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-10-27 00:47:18,664 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-10-27 00:47:18,668 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-10-27 00:47:18,673 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-10-27 00:47:18,678 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-10-27 00:47:18,682 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-10-27 00:47:18,687 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,691 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-10-27 00:47:18,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-10-27 00:47:18,692 [ scc.git] DEBUG Calling 'git remote' 2024-10-27 00:47:18,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD b4b1829] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 24444fe6 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD f560063] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-10-27 00:48:07,225 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-10-27 00:48:17,039 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-10-27 00:48:19,255 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-27 00:48:23,686 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-10-27 00:49:02,846 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS