![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision fa96199a010876372e5f8a6d8ad1a96e00b44f43 (refs/remotes/origin/master) Commit message: "Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 > git rev-list --no-walk fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 247 [Pipeline] sh > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.0-py3-none-any.whl (23 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-19 16:49:15,067 [ scc.config] DEBUG Found github.token 2024-11-19 16:49:15,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-19 16:49:15,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:49:15,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:49:16,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-19 16:49:16,056 [ scc.gh] DEBUG 4348 remaining from 5000 (Reset at 17:11 2024-11-19 16:49:16,056 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:16,059 [ scc.git] DEBUG Check current status 2024-11-19 16:49:16,060 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:16,063 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-19 16:49:16,063 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:16,104 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-19 16:49:16,106 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-19 16:49:16,109 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-19 16:49:16,111 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-19 16:49:16,121 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-19 16:49:16,123 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-19 16:49:16,126 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-19 16:49:16,128 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-19 16:49:16,131 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-19 16:49:16,134 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-19 16:49:16,136 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-19 16:49:16,139 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-19 16:49:16,142 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-19 16:49:16,144 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-19 16:49:16,147 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-19 16:49:16,149 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-19 16:49:16,151 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-19 16:49:16,154 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-19 16:49:16,156 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-19 16:49:16,158 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-19 16:49:16,161 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-19 16:49:16,164 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-19 16:49:16,167 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:16,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-19 16:49:16,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:17,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:17,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:18,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:18,211 [ scc.git] DEBUG Resetting... 2024-11-19 16:49:18,211 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-19 16:49:18,219 [ scc.git] DEBUG HEAD is now at fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-19 16:49:18,219 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-19 16:49:18,307 [ scc.git] DEBUG Check current status 2024-11-19 16:49:18,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:18,310 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-19 16:49:18,310 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:18,352 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-19 16:49:18,355 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-19 16:49:18,357 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-19 16:49:18,360 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-19 16:49:18,370 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-19 16:49:18,372 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-19 16:49:18,375 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-19 16:49:18,378 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-19 16:49:18,380 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-19 16:49:18,383 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-19 16:49:18,385 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-19 16:49:18,388 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-19 16:49:18,391 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-19 16:49:18,393 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-19 16:49:18,396 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-19 16:49:18,398 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-19 16:49:18,401 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-19 16:49:18,403 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-19 16:49:18,405 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-19 16:49:18,407 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-19 16:49:18,410 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-19 16:49:18,413 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-19 16:49:18,414 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-19 16:49:18,414 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-19 16:49:18,414 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-19 16:49:18,414 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-19 16:49:18,414 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-19 16:49:18,414 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:49:18,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-19 16:49:19,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/398 HTTP/1.1" 200 None 2024-11-19 16:49:19,213 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:49:19,213 [ scc.repo] DEBUG - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' 2024-11-19 16:49:19,213 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:49:19,213 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:49:19,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:49:19,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:49:19,220 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:49:19,220 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:49:19,223 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:49:19,227 [ scc.git] DEBUG Already up to date. 2024-11-19 16:49:19,227 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-11-19 16:49:19,546 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-19 16:49:19,546 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-11-19 16:49:19,550 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:49:19,550 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:49:19,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:49:19,553 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...08350df99cc302a66c4d7cfe2b3de79c550d6a99' 2024-11-19 16:49:19,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:49:19,560 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 398 (Bump omero-mapr from `3a505e4` to `d9953e4`) 08350df99cc302a66c4d7cfe2b3de79c550d6a99' 2024-11-19 16:49:19,616 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:49:19,618 [ scc.git] DEBUG omero-mapr | 2 +- 2024-11-19 16:49:19,618 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-19 16:49:19,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:49:19,773 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:49:19,826 [ scc.git] DEBUG Submodule path 'omero-mapr': checked out 'd9953e42ccb3142d4583329a5b066461ed9579ae' 2024-11-19 16:49:19,826 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:49:19,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:49:19,829 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:49:19,907 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0fec0f6820> has no local changes 2024-11-19 16:49:19,907 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:49:19,979 [ scc.git] DEBUG [detached HEAD 2b28e33] merge master -Dorg -Snone 2024-11-19 16:49:19,979 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-19 16:49:19,979 [ scc.merge] INFO Already up to date. 2024-11-19 16:49:19,979 [ scc.merge] INFO 2024-11-19 16:49:19,980 [ scc.merge] INFO Merged PRs: 2024-11-19 16:49:19,980 [ scc.merge] INFO - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' 2024-11-19 16:49:19,980 [ scc.merge] INFO 2024-11-19 16:49:19,980 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-19 16:49:19,980 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-iviewer': checked out '4bf017cb01df0351e757525b2a3bff6519c9a17b' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-11-19 16:49:27,539 [ scc.config] DEBUG Found github.token 2024-11-19 16:49:27,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-19 16:49:27,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:49:28,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:49:28,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-19 16:49:28,510 [ scc.gh] DEBUG 4338 remaining from 5000 (Reset at 17:11 2024-11-19 16:49:28,510 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:28,513 [ scc.git] DEBUG Check current status 2024-11-19 16:49:28,514 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:28,517 [ scc.git] DEBUG 2b28e33 merge master -Dorg -Snone 2024-11-19 16:49:28,517 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:28,559 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-19 16:49:28,561 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-19 16:49:28,564 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-19 16:49:28,566 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-19 16:49:28,576 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-19 16:49:28,578 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-19 16:49:28,580 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-19 16:49:28,584 [ scc.git] DEBUG +4bf017cb01df0351e757525b2a3bff6519c9a17b omero-iviewer (v0.14.0-25-g4bf017c) 2024-11-19 16:49:28,587 [ scc.git] DEBUG d9953e42ccb3142d4583329a5b066461ed9579ae omero-mapr (v0.5.2-16-gd9953e4) 2024-11-19 16:49:28,589 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-19 16:49:28,591 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-19 16:49:28,594 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-19 16:49:28,597 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-19 16:49:28,599 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-19 16:49:28,602 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-19 16:49:28,604 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-19 16:49:28,606 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-19 16:49:28,609 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-19 16:49:28,611 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-19 16:49:28,613 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-19 16:49:28,616 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-19 16:49:28,619 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-19 16:49:28,623 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:28,623 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-19 16:49:28,625 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-11-19 16:49:28,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-19 16:49:29,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:29,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:30,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:30,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:30,654 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:30,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-19 16:49:30,717 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:30,720 [ scc.git] DEBUG Check current status 2024-11-19 16:49:30,720 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:30,723 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-11-19 16:49:30,724 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:30,759 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:31,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-11-19 16:49:31,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:32,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:32,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:32,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:32,811 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:32,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:32,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-19 16:49:32,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:32,849 [ scc.git] DEBUG Check current status 2024-11-19 16:49:32,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:32,852 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-11-19 16:49:32,852 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:32,890 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:33,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-11-19 16:49:33,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:34,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:34,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:34,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:34,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:34,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:34,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-19 16:49:34,983 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:34,986 [ scc.git] DEBUG Check current status 2024-11-19 16:49:34,986 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:34,990 [ scc.git] DEBUG 173cac0 Bump version: 0.8.1 → 0.8.2.dev0 2024-11-19 16:49:34,990 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:35,026 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:35,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-11-19 16:49:35,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:36,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:36,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:37,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:37,106 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:37,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:37,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-19 16:49:37,140 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:37,144 [ scc.git] DEBUG Check current status 2024-11-19 16:49:37,144 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:37,147 [ scc.git] DEBUG 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-11-19 16:49:37,147 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:37,183 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:37,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-11-19 16:49:38,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:38,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:38,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:39,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:39,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:39,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:39,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-19 16:49:39,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:39,396 [ scc.git] DEBUG Check current status 2024-11-19 16:49:39,396 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:39,400 [ scc.git] DEBUG 24444fe6 Merge pull request #584 from Rdornier/link-url-to-image 2024-11-19 16:49:39,401 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:39,437 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:39,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-11-19 16:49:40,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:40,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:41,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:41,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:41,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:41,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:41,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-19 16:49:41,631 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:41,635 [ scc.git] DEBUG Check current status 2024-11-19 16:49:41,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:41,638 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-11-19 16:49:41,639 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:41,675 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:42,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-11-19 16:49:42,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:42,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:43,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:43,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:43,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:43,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:43,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-19 16:49:43,859 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:43,863 [ scc.git] DEBUG Check current status 2024-11-19 16:49:43,863 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:43,866 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-11-19 16:49:43,867 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:43,902 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:44,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-11-19 16:49:44,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:45,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:45,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:46,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:46,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:46,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:46,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-19 16:49:46,045 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:46,048 [ scc.git] DEBUG Check current status 2024-11-19 16:49:46,048 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:46,052 [ scc.git] DEBUG 4bf017c Merge pull request #495 from ome/dependabot/npm_and_yarn/multi-5727489b49 2024-11-19 16:49:46,052 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:46,089 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:46,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-11-19 16:49:46,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:47,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:47,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:48,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:48,287 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:48,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:48,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-19 16:49:48,323 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:48,326 [ scc.git] DEBUG Check current status 2024-11-19 16:49:48,326 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:48,330 [ scc.git] DEBUG d9953e4 Merge pull request #86 from will-moore/favicon_placeholder 2024-11-19 16:49:48,330 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:48,366 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:48,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-11-19 16:49:49,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:49,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:50,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:50,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:50,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:50,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:50,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-19 16:49:50,525 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:50,529 [ scc.git] DEBUG Check current status 2024-11-19 16:49:50,529 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:50,533 [ scc.git] DEBUG fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-19 16:49:50,533 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:50,570 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:50,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-11-19 16:49:51,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:51,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:52,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:52,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:52,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:52,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:52,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-19 16:49:52,685 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:52,689 [ scc.git] DEBUG Check current status 2024-11-19 16:49:52,689 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:52,693 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-11-19 16:49:52,693 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:52,729 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:53,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-11-19 16:49:53,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:53,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:54,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:54,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:54,812 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:54,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:54,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-19 16:49:54,846 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:54,850 [ scc.git] DEBUG Check current status 2024-11-19 16:49:54,850 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:54,854 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-11-19 16:49:54,854 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:54,890 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:55,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-11-19 16:49:55,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:56,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:56,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:57,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:57,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:57,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:57,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-19 16:49:57,075 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:57,079 [ scc.git] DEBUG Check current status 2024-11-19 16:49:57,079 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:57,083 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-11-19 16:49:57,083 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:57,119 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:57,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-11-19 16:49:57,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:49:58,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:49:58,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:49:59,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:49:59,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:49:59,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:49:59,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-19 16:49:59,281 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:49:59,285 [ scc.git] DEBUG Check current status 2024-11-19 16:49:59,285 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:49:59,288 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-19 16:49:59,289 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:49:59,326 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:49:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-11-19 16:50:00,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:00,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:01,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:01,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:01,438 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:01,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:01,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-19 16:50:01,473 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:01,477 [ scc.git] DEBUG Check current status 2024-11-19 16:50:01,477 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:01,481 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-11-19 16:50:01,481 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:01,518 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:01,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-19 16:50:01,891 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-19 16:50:02,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-11-19 16:50:02,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:03,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:03,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:03,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:03,841 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:03,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:03,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-19 16:50:03,875 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:03,879 [ scc.git] DEBUG Check current status 2024-11-19 16:50:03,879 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:03,883 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-11-19 16:50:03,883 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:03,920 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:04,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-11-19 16:50:04,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:05,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:05,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:06,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:06,035 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:06,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:06,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-19 16:50:06,070 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:06,074 [ scc.git] DEBUG Check current status 2024-11-19 16:50:06,074 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:06,078 [ scc.git] DEBUG deab817 update setup-python to v4 2024-11-19 16:50:06,078 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:06,116 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:06,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-11-19 16:50:06,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:07,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:07,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:08,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:08,249 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:08,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:08,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-19 16:50:08,284 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:08,288 [ scc.git] DEBUG Check current status 2024-11-19 16:50:08,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:08,292 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-19 16:50:08,292 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:08,331 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:08,331 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-11-19 16:50:08,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-11-19 16:50:09,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:09,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:10,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:10,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:10,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:10,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:10,553 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-19 16:50:10,553 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:10,556 [ scc.git] DEBUG Check current status 2024-11-19 16:50:10,557 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:10,561 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-11-19 16:50:10,561 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:10,598 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:10,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-19 16:50:10,927 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-19 16:50:11,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-11-19 16:50:11,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:12,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:12,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:12,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:12,857 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:12,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:12,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-19 16:50:12,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:12,897 [ scc.git] DEBUG Check current status 2024-11-19 16:50:12,897 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:12,901 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-11-19 16:50:12,901 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:12,939 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:13,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-19 16:50:13,291 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-19 16:50:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-11-19 16:50:14,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:14,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:14,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:15,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:15,244 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:15,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:15,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-19 16:50:15,279 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:15,283 [ scc.git] DEBUG Check current status 2024-11-19 16:50:15,284 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:15,288 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-19 16:50:15,288 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:15,325 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:15,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-11-19 16:50:16,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:16,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:17,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:17,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:17,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:17,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:17,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-19 16:50:17,472 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-19 16:50:17,476 [ scc.git] DEBUG Check current status 2024-11-19 16:50:17,476 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:17,481 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-19 16:50:17,481 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:17,520 [ scc.config] DEBUG Found remote.origin.url 2024-11-19 16:50:17,520 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-19 16:50:17,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-19 16:50:17,846 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-19 16:50:18,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-11-19 16:50:18,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-19 16:50:18,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-19 16:50:19,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:19,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-19 16:50:19,848 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:19,883 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:19,883 [ scc.git] DEBUG Resetting... 2024-11-19 16:50:19,883 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-19 16:50:19,892 [ scc.git] DEBUG HEAD is now at 2b28e33 merge master -Dorg -Snone 2024-11-19 16:50:19,892 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-19 16:50:19,965 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out 'a8f380fabfd839b946e5a5f613f1fce07abb3815' 2024-11-19 16:50:20,003 [ scc.git] DEBUG Check current status 2024-11-19 16:50:20,003 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-19 16:50:20,007 [ scc.git] DEBUG 2b28e33 merge master -Dorg -Snone 2024-11-19 16:50:20,007 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-19 16:50:20,049 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-19 16:50:20,051 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-19 16:50:20,053 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-19 16:50:20,056 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-19 16:50:20,065 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-19 16:50:20,068 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-19 16:50:20,070 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-19 16:50:20,073 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-19 16:50:20,076 [ scc.git] DEBUG d9953e42ccb3142d4583329a5b066461ed9579ae omero-mapr (v0.5.2-16-gd9953e4) 2024-11-19 16:50:20,078 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-19 16:50:20,081 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-19 16:50:20,083 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-19 16:50:20,086 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-19 16:50:20,088 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-19 16:50:20,091 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-19 16:50:20,094 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-19 16:50:20,096 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-19 16:50:20,098 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-19 16:50:20,100 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-19 16:50:20,103 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-19 16:50:20,105 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-19 16:50:20,108 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-19 16:50:20,109 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-19 16:50:20,109 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-19 16:50:20,109 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-19 16:50:20,109 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-19 16:50:20,109 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-19 16:50:20,109 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-19 16:50:20,109 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:20,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-19 16:50:20,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/398 HTTP/1.1" 200 None 2024-11-19 16:50:20,803 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:50:21,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/08350df99cc302a66c4d7cfe2b3de79c550d6a99 HTTP/1.1" 200 None 2024-11-19 16:50:21,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/08350df99cc302a66c4d7cfe2b3de79c550d6a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:22,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/08350df99cc302a66c4d7cfe2b3de79c550d6a99 HTTP/1.1" 200 None 2024-11-19 16:50:22,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/08350df99cc302a66c4d7cfe2b3de79c550d6a99?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:22,577 [ scc.repo] DEBUG - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' 2024-11-19 16:50:22,577 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:50:22,578 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:22,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:22,582 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:50:22,586 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:50:22,587 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:50:22,591 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:50:22,596 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:22,596 [ scc.git] DEBUG Calling 'git fetch origin pull/398/head' 2024-11-19 16:50:22,933 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-19 16:50:22,933 [ scc.git] DEBUG * branch refs/pull/398/head -> FETCH_HEAD 2024-11-19 16:50:22,937 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:50:22,937 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:22,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:22,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...08350df99cc302a66c4d7cfe2b3de79c550d6a99' 2024-11-19 16:50:22,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:22,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 398 (Bump omero-mapr from `3a505e4` to `d9953e4`) 08350df99cc302a66c4d7cfe2b3de79c550d6a99' 2024-11-19 16:50:22,955 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:23,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:23,094 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:50:23,142 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:23,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:23,147 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:23,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-11-19 16:50:24,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-11-19 16:50:24,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-11-19 16:50:24,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:25,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:50:25,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-11-19 16:50:26,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:26,284 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-11-19 16:50:26,284 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:50:26,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-19 16:50:26,284 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:26,284 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:26,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:50:26,293 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:50:26,293 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:50:26,298 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:50:26,302 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:26,303 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-11-19 16:50:26,591 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-11-19 16:50:26,591 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-11-19 16:50:26,595 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:50:26,595 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:26,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:26,599 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-11-19 16:50:26,604 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:26,608 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-11-19 16:50:26,617 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:50:26,619 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-11-19 16:50:26,620 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-11-19 16:50:26,620 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-11-19 16:50:26,620 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-11-19 16:50:26,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:26,755 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:50:26,791 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:26,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:26,796 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:26,830 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:50:26,836 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc65f269d0> has no local changes 2024-11-19 16:50:26,836 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:50:26,843 [ scc.git] DEBUG [detached HEAD 7fdaa98] merge master -Dorg -Ssuccess-only 2024-11-19 16:50:26,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:26,843 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:27,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-11-19 16:50:27,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-11-19 16:50:28,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-11-19 16:50:28,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-11-19 16:50:29,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:29,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:50:30,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-11-19 16:50:30,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:30,943 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-11-19 16:50:31,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-11-19 16:50:31,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-11-19 16:50:31,947 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:50:31,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-19 16:50:31,947 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:31,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:31,952 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:50:31,956 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:50:31,956 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:50:31,961 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:50:31,966 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:31,966 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-11-19 16:50:32,283 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-11-19 16:50:32,283 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-11-19 16:50:32,287 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:50:32,287 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:32,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:32,292 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-11-19 16:50:32,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:32,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-11-19 16:50:32,309 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:50:32,311 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-11-19 16:50:32,311 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-11-19 16:50:32,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:32,469 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:50:32,503 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:32,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:32,508 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:32,542 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:50:32,547 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc66a3cf70> has no local changes 2024-11-19 16:50:32,547 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:50:32,554 [ scc.git] DEBUG [detached HEAD e632a85] merge master -Dorg -Ssuccess-only 2024-11-19 16:50:32,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:32,555 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:33,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-11-19 16:50:33,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/67 HTTP/1.1" 200 None 2024-11-19 16:50:34,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/67/comments HTTP/1.1" 200 None 2024-11-19 16:50:34,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6e17b84c285933c4b454e5f7581211f99844b10d HTTP/1.1" 200 None 2024-11-19 16:50:34,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6e17b84c285933c4b454e5f7581211f99844b10d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:35,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6e17b84c285933c4b454e5f7581211f99844b10d HTTP/1.1" 200 None 2024-11-19 16:50:35,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6e17b84c285933c4b454e5f7581211f99844b10d?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:35,801 [ scc.repo] DEBUG - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' 2024-11-19 16:50:36,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-11-19 16:50:36,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-11-19 16:50:37,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-11-19 16:50:37,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-11-19 16:50:38,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-11-19 16:50:38,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:39,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-11-19 16:50:39,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:39,555 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-11-19 16:50:40,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-11-19 16:50:40,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-11-19 16:50:40,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-11-19 16:50:41,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-11-19 16:50:41,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-11-19 16:50:41,889 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:50:41,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-19 16:50:41,889 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:41,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:41,894 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:50:41,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:50:41,898 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:50:41,903 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:50:41,908 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:41,908 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-11-19 16:50:42,220 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-11-19 16:50:42,220 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-11-19 16:50:42,223 [ scc.git] DEBUG Calling 'git fetch origin pull/67/head' 2024-11-19 16:50:42,520 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-11-19 16:50:42,520 [ scc.git] DEBUG * branch refs/pull/67/head -> FETCH_HEAD 2024-11-19 16:50:42,523 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:50:42,523 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:42,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:42,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-11-19 16:50:42,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:42,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-11-19 16:50:42,546 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-11-19 16:50:42,562 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:50:42,564 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-11-19 16:50:42,564 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-11-19 16:50:42,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:42,713 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6e17b84c285933c4b454e5f7581211f99844b10d' 2024-11-19 16:50:42,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:42,722 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 67 (omero render set: clarify help around settings for disabled channels) 6e17b84c285933c4b454e5f7581211f99844b10d' 2024-11-19 16:50:42,732 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-11-19 16:50:42,732 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:50:42,735 [ scc.git] DEBUG src/omero_cli_render.py | 6 ++---- 2024-11-19 16:50:42,735 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 4 deletions(-) 2024-11-19 16:50:43,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:43,097 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:50:43,131 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:43,132 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:43,136 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:43,170 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:50:43,175 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c5edf0> has no local changes 2024-11-19 16:50:43,175 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:50:43,182 [ scc.git] DEBUG [detached HEAD 2d234a0] merge master -Dorg -Ssuccess-only 2024-11-19 16:50:43,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:43,183 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:43,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-11-19 16:50:44,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-11-19 16:50:44,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-11-19 16:50:45,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-11-19 16:50:45,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-19 16:50:46,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:46,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:50:46,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-19 16:50:47,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:47,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-19 16:50:48,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-11-19 16:50:48,216 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-11-19 16:50:48,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-11-19 16:50:49,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-11-19 16:50:49,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-11-19 16:50:50,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-19 16:50:50,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-19 16:50:51,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:51,455 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-19 16:50:52,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-11-19 16:50:52,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-11-19 16:50:53,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-19 16:50:53,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:50:53,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-19 16:50:54,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:50:54,395 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-11-19 16:50:54,395 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:50:54,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-19 16:50:54,395 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:54,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:54,400 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:50:54,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:50:54,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:50:54,410 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:50:54,415 [ scc.git] DEBUG Already up to date. 2024-11-19 16:50:54,415 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-11-19 16:50:54,733 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-19 16:50:54,733 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-11-19 16:50:54,736 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-11-19 16:50:55,037 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-19 16:50:55,037 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-11-19 16:50:55,040 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-11-19 16:50:55,320 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-19 16:50:55,320 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-11-19 16:50:55,323 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:50:55,323 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:55,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:55,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-19 16:50:55,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:55,339 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-19 16:50:55,350 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-19 16:50:55,350 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-19 16:50:55,350 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-19 16:50:55,350 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:50:55,351 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:50:55,355 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-19 16:50:55,361 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-11-19 16:50:55,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:55,496 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-19 16:50:55,502 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-19 16:50:55,507 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-11-19 16:50:55,511 [ scc.config] DEBUG Found github.token 2024-11-19 16:50:55,511 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-11-19 16:50:55,511 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-19 16:50:55,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:55,521 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-19 16:50:55,532 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-11-19 16:50:55,533 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-11-19 16:50:55,533 [ scc.git] DEBUG Auto-merging setup.py 2024-11-19 16:50:55,533 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-19 16:50:55,533 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-19 16:50:55,533 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-19 16:50:55,533 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-11-19 16:50:55,533 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:50:55,533 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:50:55,538 [ scc.git] DEBUG Calling 'git reset --hard 9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-19 16:50:55,543 [ scc.git] DEBUG HEAD is now at 9b73dd9 Merge pull request #161 from ome/pre-commit-ci-update-config 2024-11-19 16:50:55,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:55,881 [ scc.git] DEBUG Calling 'git merge-base 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-19 16:50:55,887 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-19 16:50:55,892 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-11-19 16:50:55,896 [ scc.config] DEBUG Found github.token 2024-11-19 16:50:55,896 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-11-19 16:50:55,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-19 16:50:55,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:55,906 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-19 16:50:55,916 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-11-19 16:50:55,916 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-19 16:50:55,917 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:50:55,919 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-11-19 16:50:55,920 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-11-19 16:50:55,920 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-11-19 16:50:55,920 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-11-19 16:50:55,920 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-11-19 16:50:55,920 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-11-19 16:50:56,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:50:56,322 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:50:56,356 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:50:56,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:50:56,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:50:56,397 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:50:56,403 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c0e280> has no local changes 2024-11-19 16:50:56,403 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:50:56,410 [ scc.git] DEBUG [detached HEAD a0d2fc3] merge master -Dorg -Ssuccess-only 2024-11-19 16:50:56,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:50:56,411 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:50:56,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-11-19 16:50:57,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-11-19 16:50:57,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-11-19 16:50:58,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-11-19 16:50:58,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-11-19 16:50:58,800 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:50:59,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157 HTTP/1.1" 200 None 2024-11-19 16:50:59,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:00,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:00,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/a9211ff55928978567568c77958139cc70778157 HTTP/1.1" 200 None 2024-11-19 16:51:01,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/a9211ff55928978567568c77958139cc70778157?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:01,273 [ scc.repo] DEBUG - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-11-19 16:51:01,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-11-19 16:51:01,836 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:02,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525 HTTP/1.1" 200 None 2024-11-19 16:51:02,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:03,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:03,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525 HTTP/1.1" 200 None 2024-11-19 16:51:04,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/69b42637f74e4caf1feab8af6faae3757be92525?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:04,209 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-11-19 16:51:04,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-11-19 16:51:05,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-11-19 16:51:05,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596/comments HTTP/1.1" 200 None 2024-11-19 16:51:05,624 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:06,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116 HTTP/1.1" 200 None 2024-11-19 16:51:06,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:06,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:07,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116 HTTP/1.1" 200 None 2024-11-19 16:51:07,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:07,827 [ scc.repo] DEBUG - PR 596 Tom-TBT 'Dynamic lut for figure' 2024-11-19 16:51:08,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-11-19 16:51:08,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-11-19 16:51:08,843 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:09,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-11-19 16:51:09,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:10,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:10,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce HTTP/1.1" 200 None 2024-11-19 16:51:11,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:11,140 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-19 16:51:11,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-11-19 16:51:12,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-11-19 16:51:12,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-11-19 16:51:13,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:13,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:13,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-11-19 16:51:14,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:14,333 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-19 16:51:14,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-11-19 16:51:15,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-11-19 16:51:15,319 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:15,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-11-19 16:51:16,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:16,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:17,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-11-19 16:51:17,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/339e655bba6f9b7283bd907272429ead97e7ca5d?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:17,540 [ scc.repo] DEBUG - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-11-19 16:51:18,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-11-19 16:51:18,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-11-19 16:51:18,601 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:19,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/13071e27a9700511bbb0732acaf20749bd8702d0 HTTP/1.1" 200 None 2024-11-19 16:51:19,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/13071e27a9700511bbb0732acaf20749bd8702d0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:19,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/13071e27a9700511bbb0732acaf20749bd8702d0/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:20,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/13071e27a9700511bbb0732acaf20749bd8702d0 HTTP/1.1" 200 None 2024-11-19 16:51:20,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/13071e27a9700511bbb0732acaf20749bd8702d0?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:20,783 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-11-19 16:51:21,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577 HTTP/1.1" 200 None 2024-11-19 16:51:21,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/577/comments HTTP/1.1" 200 None 2024-11-19 16:51:22,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/577/comments?page=2 HTTP/1.1" 200 None 2024-11-19 16:51:22,431 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:22,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fc8e38350eed239a9a4ede4a0c3514efbe9c9a01 HTTP/1.1" 200 None 2024-11-19 16:51:23,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fc8e38350eed239a9a4ede4a0c3514efbe9c9a01/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:23,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fc8e38350eed239a9a4ede4a0c3514efbe9c9a01/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:24,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fc8e38350eed239a9a4ede4a0c3514efbe9c9a01 HTTP/1.1" 200 None 2024-11-19 16:51:24,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fc8e38350eed239a9a4ede4a0c3514efbe9c9a01?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:24,713 [ scc.repo] DEBUG - PR 577 Rdornier 'Fill rois' 2024-11-19 16:51:24,714 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:51:24,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-19 16:51:24,714 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:24,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:24,720 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:51:24,725 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:51:24,725 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:51:24,731 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:51:24,736 [ scc.git] DEBUG Already up to date. 2024-11-19 16:51:24,737 [ scc.git] DEBUG Calling 'git fetch origin pull/577/head' 2024-11-19 16:51:25,070 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:25,071 [ scc.git] DEBUG * branch refs/pull/577/head -> FETCH_HEAD 2024-11-19 16:51:25,075 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-11-19 16:51:25,391 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:25,391 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-11-19 16:51:25,395 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-11-19 16:51:25,694 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:25,694 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-11-19 16:51:25,698 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-11-19 16:51:25,994 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:25,994 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-11-19 16:51:25,998 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-11-19 16:51:26,300 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:26,300 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-11-19 16:51:26,304 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2024-11-19 16:51:26,597 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:26,597 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2024-11-19 16:51:26,602 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-11-19 16:51:26,949 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:26,949 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-11-19 16:51:26,954 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-11-19 16:51:27,242 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-19 16:51:27,242 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-11-19 16:51:27,246 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:51:27,246 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:27,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:27,251 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fc8e38350eed239a9a4ede4a0c3514efbe9c9a01' 2024-11-19 16:51:27,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:27,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 577 (Fill rois) fc8e38350eed239a9a4ede4a0c3514efbe9c9a01' 2024-11-19 16:51:27,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:27,285 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 21 ++++++- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/css/figure.css | 4 +- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/index.html | 14 ++--- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/models/roi_model.js | 11 ++++ 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 46 +++++++++++++-- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/line.js | 16 +++++ 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/point.js | 49 ++++++++++++++-- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 40 ++++++++++++- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/rect.js | 48 +++++++++++++-- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 68 ++++++++++++++++++++-- 2024-11-19 16:51:27,285 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 34 ++++++++++- 2024-11-19 16:51:27,287 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 57 +++++++++++++++++- 2024-11-19 16:51:27,287 [ scc.git] DEBUG 12 files changed, 374 insertions(+), 34 deletions(-) 2024-11-19 16:51:27,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:27,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...13071e27a9700511bbb0732acaf20749bd8702d0' 2024-11-19 16:51:27,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:27,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) 13071e27a9700511bbb0732acaf20749bd8702d0' 2024-11-19 16:51:27,457 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-11-19 16:51:27,457 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-19 16:51:27,457 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-11-19 16:51:27,458 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:27,463 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 237 +++++++++++++++------ 2024-11-19 16:51:27,463 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-11-19 16:51:27,463 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-11-19 16:51:27,463 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-11-19 16:51:27,463 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-11-19 16:51:27,463 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-11-19 16:51:27,463 [ scc.git] DEBUG 6 files changed, 371 insertions(+), 75 deletions(-) 2024-11-19 16:51:27,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:27,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-11-19 16:51:27,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:27,824 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Add Horizontal and Vertical Image Flipping Functionality) 339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/index.html 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-19 16:51:27,854 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-11-19 16:51:27,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:27,861 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 71 +++++++++++++++++++- 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/css/figure.css | 14 ++++ 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/index.html | 1 + 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++- 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/js/views/panel_view.js | 4 +- 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/js/views/right_panel_view.js | 75 +++++++++++++++++++++- 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 10 +-- 2024-11-19 16:51:27,861 [ scc.git] DEBUG src/templates/image_display_options.template.html | 11 +++- 2024-11-19 16:51:27,861 [ scc.git] DEBUG 8 files changed, 178 insertions(+), 17 deletions(-) 2024-11-19 16:51:28,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:28,203 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-11-19 16:51:28,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:28,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-11-19 16:51:28,284 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:28,287 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-11-19 16:51:28,287 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-11-19 16:51:28,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:28,585 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-11-19 16:51:28,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:28,598 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-11-19 16:51:28,618 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-19 16:51:28,618 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-11-19 16:51:28,618 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-11-19 16:51:28,618 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-19 16:51:28,618 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2024-11-19 16:51:28,618 [ scc.git] DEBUG Auto-merging src/templates/image_display_options.template.html 2024-11-19 16:51:28,619 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/image_display_options.template.html 2024-11-19 16:51:28,619 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:51:28,619 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:51:28,626 [ scc.git] DEBUG Calling 'git reset --hard 74d496f4af6667b00ac033e27c8c21305cf4ee0c' 2024-11-19 16:51:28,635 [ scc.git] DEBUG HEAD is now at 74d496f4 merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 2024-11-19 16:51:29,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:29,062 [ scc.git] DEBUG Calling 'git merge-base 24444fe6bf35af27230c28e466f9819b08853118 d7154f54e7f48bbfa0bd61ed568b26b9aa2f88ce' 2024-11-19 16:51:29,069 [ scc.git] DEBUG Calling 'git diff --name-only 24444fe6bf35af27230c28e466f9819b08853118..24444fe6bf35af27230c28e466f9819b08853118' 2024-11-19 16:51:29,074 [ scc.git] INFO - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - PR #578 Rdornier 'Image outline' - src/js/views/right_panel_view.js - PR #591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - src/templates/image_display_options.template.html - src/js/views/right_panel_view.js --conflicts 2024-11-19 16:51:29,078 [ scc.config] DEBUG Found github.token 2024-11-19 16:51:29,078 [ scc.git] DEBUG Not adding comment to issue #595, already --conflicts. 2024-11-19 16:51:29,079 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d7cf65c6bd74a52d16ef81ec52ae08fd899ed116' 2024-11-19 16:51:29,088 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:29,092 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Dynamic lut for figure) d7cf65c6bd74a52d16ef81ec52ae08fd899ed116' 2024-11-19 16:51:29,111 [ scc.git] DEBUG Auto-merging omero_figure/urls.py 2024-11-19 16:51:29,111 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-19 16:51:29,111 [ scc.git] DEBUG Auto-merging src/js/views/channel_slider_view.js 2024-11-19 16:51:29,112 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:29,116 [ scc.git] DEBUG omero_figure/urls.py | 3 +- 2024-11-19 16:51:29,116 [ scc.git] DEBUG src/css/figure.css | 5 +- 2024-11-19 16:51:29,116 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 7 +-- 2024-11-19 16:51:29,116 [ scc.git] DEBUG src/js/views/lutpicker.js | 84 ++++++++++++------------------ 2024-11-19 16:51:29,116 [ scc.git] DEBUG src/templates/channel_slider.template.html | 3 +- 2024-11-19 16:51:29,116 [ scc.git] DEBUG src/templates/lut_picker.template.html | 2 +- 2024-11-19 16:51:29,116 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 62 deletions(-) 2024-11-19 16:51:29,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:29,460 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...69b42637f74e4caf1feab8af6faae3757be92525' 2024-11-19 16:51:29,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:29,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 69b42637f74e4caf1feab8af6faae3757be92525' 2024-11-19 16:51:29,488 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:29,491 [ scc.git] DEBUG omero_figure/omeroutils.py | 24 ++++++++++++++++++++++++ 2024-11-19 16:51:29,491 [ scc.git] DEBUG 1 file changed, 24 insertions(+) 2024-11-19 16:51:29,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:29,886 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a9211ff55928978567568c77958139cc70778157' 2024-11-19 16:51:29,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:29,899 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Patch label text selection and cue for dragging) a9211ff55928978567568c77958139cc70778157' 2024-11-19 16:51:29,919 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-19 16:51:29,919 [ scc.git] DEBUG Auto-merging src/index.html 2024-11-19 16:51:29,919 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-19 16:51:29,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:29,925 [ scc.git] DEBUG omero_figure/views.py | 2 +- 2024-11-19 16:51:29,925 [ scc.git] DEBUG package.json | 2 +- 2024-11-19 16:51:29,925 [ scc.git] DEBUG src/css/figure.css | 12 ++++++++++-- 2024-11-19 16:51:29,926 [ scc.git] DEBUG src/index.html | 2 +- 2024-11-19 16:51:29,926 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 +++- 2024-11-19 16:51:29,926 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 7 ++++--- 2024-11-19 16:51:29,926 [ scc.git] DEBUG 6 files changed, 20 insertions(+), 9 deletions(-) 2024-11-19 16:51:30,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:30,292 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:51:30,328 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:30,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:30,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:51:30,367 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:51:30,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c2bfa0> has no local changes 2024-11-19 16:51:30,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 596 Tom-TBT 'Dynamic lut for figure' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:51:30,447 [ scc.git] DEBUG [detached HEAD 377eff34] merge master -Dorg -Ssuccess-only 2024-11-19 16:51:30,448 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:51:30,448 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:51:30,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-11-19 16:51:31,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-11-19 16:51:31,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-11-19 16:51:32,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-19 16:51:32,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:33,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-19 16:51:33,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:33,507 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-11-19 16:51:33,507 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:51:33,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-19 16:51:33,507 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:33,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:33,513 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:51:33,517 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:51:33,518 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:51:33,522 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:51:33,527 [ scc.git] DEBUG Already up to date. 2024-11-19 16:51:33,528 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-11-19 16:51:33,898 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-11-19 16:51:33,898 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-11-19 16:51:33,902 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:51:33,903 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:33,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:33,907 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-19 16:51:33,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:33,917 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-19 16:51:33,925 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-11-19 16:51:33,934 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:33,936 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-11-19 16:51:33,936 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-19 16:51:34,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:34,078 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:51:34,114 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:34,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:34,119 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:51:34,153 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:51:34,159 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c45d00> has no local changes 2024-11-19 16:51:34,159 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:51:34,166 [ scc.git] DEBUG [detached HEAD 7690441] merge master -Dorg -Ssuccess-only 2024-11-19 16:51:34,166 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:51:34,166 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:51:34,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-11-19 16:51:35,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-11-19 16:51:35,088 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:51:35,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-11-19 16:51:36,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:36,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-11-19 16:51:37,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:37,033 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-11-19 16:51:37,033 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:51:37,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-19 16:51:37,033 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:37,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:37,038 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:51:37,042 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:51:37,042 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:51:37,047 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:51:37,052 [ scc.git] DEBUG Already up to date. 2024-11-19 16:51:37,052 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-11-19 16:51:37,362 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-19 16:51:37,363 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-11-19 16:51:37,366 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:51:37,367 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:37,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:37,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-11-19 16:51:37,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:37,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-11-19 16:51:37,401 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:37,405 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-11-19 16:51:37,405 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-11-19 16:51:37,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:37,561 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:51:37,597 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:37,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:37,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:51:37,636 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:51:37,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c16580> has no local changes 2024-11-19 16:51:37,643 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:51:37,651 [ scc.git] DEBUG [detached HEAD 2378c95] merge master -Dorg -Ssuccess-only 2024-11-19 16:51:37,651 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:51:37,651 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:51:38,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-11-19 16:51:38,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488 HTTP/1.1" 200 None 2024-11-19 16:51:39,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 200 None 2024-11-19 16:51:39,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/34fabdfc76f6060fbe6fc29bea384bd6f934a1ba HTTP/1.1" 200 None 2024-11-19 16:51:39,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/34fabdfc76f6060fbe6fc29bea384bd6f934a1ba/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:40,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/34fabdfc76f6060fbe6fc29bea384bd6f934a1ba/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:40,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/34fabdfc76f6060fbe6fc29bea384bd6f934a1ba HTTP/1.1" 200 None 2024-11-19 16:51:41,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/34fabdfc76f6060fbe6fc29bea384bd6f934a1ba?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:41,273 [ scc.repo] DEBUG - PR 488 will-moore 'Mobile layout' 2024-11-19 16:51:41,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485 HTTP/1.1" 200 None 2024-11-19 16:51:42,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/485/comments HTTP/1.1" 200 None 2024-11-19 16:51:42,268 [ scc.repo] DEBUG # ... Include label: include 2024-11-19 16:51:42,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b47822cec4b30f065e8ceb67f98570c307e2b0e6 HTTP/1.1" 200 None 2024-11-19 16:51:43,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b47822cec4b30f065e8ceb67f98570c307e2b0e6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:43,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b47822cec4b30f065e8ceb67f98570c307e2b0e6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:44,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b47822cec4b30f065e8ceb67f98570c307e2b0e6 HTTP/1.1" 200 None 2024-11-19 16:51:44,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b47822cec4b30f065e8ceb67f98570c307e2b0e6?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:44,465 [ scc.repo] DEBUG - PR 485 Tom-TBT 'Dynamic LUT for iviewer' 2024-11-19 16:51:44,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-11-19 16:51:45,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-11-19 16:51:45,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-19 16:51:46,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:46,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:47,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-19 16:51:47,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:47,622 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-19 16:51:48,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-11-19 16:51:48,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-11-19 16:51:49,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-19 16:51:49,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:50,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:51:50,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-19 16:51:50,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:50,891 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-11-19 16:51:51,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-11-19 16:51:51,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-11-19 16:51:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-19 16:51:52,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:51:53,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-19 16:51:53,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:51:53,668 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-11-19 16:51:53,668 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:51:53,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-19 16:51:53,669 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:53,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:53,674 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:51:53,679 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:51:53,680 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:51:53,685 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:51:53,713 [ scc.git] DEBUG Updating a8f380f..4bf017c 2024-11-19 16:51:54,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/495 HTTP/1.1" 200 None 2024-11-19 16:51:54,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/486 HTTP/1.1" 200 None 2024-11-19 16:51:55,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/484 HTTP/1.1" 200 None 2024-11-19 16:51:55,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/494 HTTP/1.1" 200 None 2024-11-19 16:51:56,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/489 HTTP/1.1" 200 None 2024-11-19 16:51:56,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/477 HTTP/1.1" 200 None 2024-11-19 16:51:57,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/482 HTTP/1.1" 200 None 2024-11-19 16:51:57,503 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-11-19 16:51:57,810 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-19 16:51:57,810 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-11-19 16:51:57,813 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-11-19 16:51:58,120 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-19 16:51:58,120 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-11-19 16:51:58,124 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-11-19 16:51:58,426 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-19 16:51:58,427 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-11-19 16:51:58,431 [ scc.git] DEBUG Calling 'git fetch origin pull/485/head' 2024-11-19 16:51:58,708 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-19 16:51:58,709 [ scc.git] DEBUG * branch refs/pull/485/head -> FETCH_HEAD 2024-11-19 16:51:58,712 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head' 2024-11-19 16:51:58,996 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-19 16:51:58,996 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD 2024-11-19 16:51:58,999 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:51:59,000 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:51:59,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:59,004 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-19 16:51:59,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:59,014 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-19 16:51:59,029 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-11-19 16:51:59,030 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:59,033 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-11-19 16:51:59,033 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-11-19 16:51:59,033 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-11-19 16:51:59,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:59,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-19 16:51:59,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:59,176 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-19 16:51:59,193 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-11-19 16:51:59,193 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-11-19 16:51:59,193 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-11-19 16:51:59,194 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-11-19 16:51:59,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:59,198 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-11-19 16:51:59,198 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-11-19 16:51:59,198 [ scc.git] DEBUG src/app/header.html | 5 + 2024-11-19 16:51:59,198 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-11-19 16:51:59,198 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-11-19 16:51:59,198 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-11-19 16:51:59,198 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-11-19 16:51:59,198 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-11-19 16:51:59,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:59,559 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-19 16:51:59,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:59,570 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-19 16:51:59,582 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-11-19 16:51:59,583 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:51:59,585 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-11-19 16:51:59,585 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-11-19 16:51:59,585 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-11-19 16:51:59,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:51:59,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b47822cec4b30f065e8ceb67f98570c307e2b0e6' 2024-11-19 16:51:59,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:51:59,971 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 485 (Dynamic LUT for iviewer) b47822cec4b30f065e8ceb67f98570c307e2b0e6' 2024-11-19 16:51:59,985 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-11-19 16:51:59,985 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-11-19 16:52:00,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:00,006 [ scc.git] DEBUG src/app/context.js | 54 +++++++++++++++++++++++++++----------------------- 2024-11-19 16:52:00,006 [ scc.git] DEBUG src/utils/constants.js | 46 ------------------------------------------ 2024-11-19 16:52:00,006 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 71 deletions(-) 2024-11-19 16:52:00,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:00,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...34fabdfc76f6060fbe6fc29bea384bd6f934a1ba' 2024-11-19 16:52:00,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:00,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Mobile layout) 34fabdfc76f6060fbe6fc29bea384bd6f934a1ba' 2024-11-19 16:52:00,371 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:00,375 [ scc.git] DEBUG css/app.css | 100 +++++++++++++++++++++------ 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/app/index.html | 2 +- 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/app/thumbnail-slider.html | 6 +- 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/app/thumbnail-slider.js | 3 - 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/index-dev.html | 1 + 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/index.html | 1 + 2024-11-19 16:52:00,375 [ scc.git] DEBUG src/utils/ui.js | 154 +++++++++++++++++------------------------- 2024-11-19 16:52:00,375 [ scc.git] DEBUG 7 files changed, 147 insertions(+), 120 deletions(-) 2024-11-19 16:52:00,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:00,741 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:00,776 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:00,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:00,782 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:00,817 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:00,824 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c164f0> has no local changes 2024-11-19 16:52:00,824 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating a8f380f..4bf017c Previously merged: - PR 495 dependabot[bot] 'Bump cookie and socket.io' - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 484 barrettMCW 'improved mirroring' - PR 494 dependabot[bot] 'Bump webpack from 5.82.0 to 5.96.1' - PR 489 dependabot[bot] 'Bump send and express' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 485 Tom-TBT 'Dynamic LUT for iviewer' - PR 488 will-moore 'Mobile layout' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:00,833 [ scc.git] DEBUG [detached HEAD 705dd60] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:00,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:00,834 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:01,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-11-19 16:52:01,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/90 HTTP/1.1" 200 None 2024-11-19 16:52:02,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/ba2a65ad3901b65582775beda60b288e225b1003 HTTP/1.1" 200 None 2024-11-19 16:52:02,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/ba2a65ad3901b65582775beda60b288e225b1003/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:03,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/ba2a65ad3901b65582775beda60b288e225b1003/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:52:03,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/ba2a65ad3901b65582775beda60b288e225b1003 HTTP/1.1" 200 None 2024-11-19 16:52:04,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/ba2a65ad3901b65582775beda60b288e225b1003?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:04,095 [ scc.repo] DEBUG - PR 90 jburel 'Update gha' 2024-11-19 16:52:04,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-11-19 16:52:05,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-11-19 16:52:05,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-19 16:52:05,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:06,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-19 16:52:06,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:06,802 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-11-19 16:52:06,802 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:06,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-19 16:52:06,802 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:06,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:06,808 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:06,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:06,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:06,818 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:06,823 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:06,824 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-11-19 16:52:07,119 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-11-19 16:52:07,119 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-11-19 16:52:07,124 [ scc.git] DEBUG Calling 'git fetch origin pull/90/head' 2024-11-19 16:52:07,430 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-11-19 16:52:07,430 [ scc.git] DEBUG * branch refs/pull/90/head -> FETCH_HEAD 2024-11-19 16:52:07,434 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:07,434 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:07,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:07,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-19 16:52:07,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:07,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-19 16:52:07,459 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:07,461 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-11-19 16:52:07,461 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-11-19 16:52:07,461 [ scc.git] DEBUG requirements.txt | 2 +- 2024-11-19 16:52:07,461 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-11-19 16:52:07,461 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-11-19 16:52:07,461 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-11-19 16:52:07,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:07,616 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba2a65ad3901b65582775beda60b288e225b1003' 2024-11-19 16:52:07,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:07,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 90 (Update gha) ba2a65ad3901b65582775beda60b288e225b1003' 2024-11-19 16:52:07,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:07,637 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-19 16:52:07,637 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 8 +++++--- 2024-11-19 16:52:07,637 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 4 deletions(-) 2024-11-19 16:52:07,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:07,999 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:08,034 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:08,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:08,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:08,073 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:08,079 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc643c6370> has no local changes 2024-11-19 16:52:08,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 90 jburel 'Update gha' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:08,087 [ scc.git] DEBUG [detached HEAD 2cbcda2] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:08,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:08,087 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:08,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-11-19 16:52:09,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/88 HTTP/1.1" 200 None 2024-11-19 16:52:09,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/295b3c79ae9a35f8c588400f25e14fbcab329926 HTTP/1.1" 200 None 2024-11-19 16:52:10,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/295b3c79ae9a35f8c588400f25e14fbcab329926/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:10,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/295b3c79ae9a35f8c588400f25e14fbcab329926/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:52:10,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/295b3c79ae9a35f8c588400f25e14fbcab329926 HTTP/1.1" 200 None 2024-11-19 16:52:11,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/295b3c79ae9a35f8c588400f25e14fbcab329926?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:11,304 [ scc.repo] DEBUG - PR 88 jburel 'Update gha' 2024-11-19 16:52:11,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-11-19 16:52:12,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-11-19 16:52:12,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-19 16:52:13,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:13,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-19 16:52:14,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:14,143 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-19 16:52:14,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-11-19 16:52:15,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-11-19 16:52:15,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-19 16:52:15,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:16,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-19 16:52:16,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:16,840 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-19 16:52:16,840 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:16,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-19 16:52:16,841 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:16,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:16,847 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:16,851 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:16,852 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:16,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:16,862 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:16,862 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-11-19 16:52:17,173 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-19 16:52:17,173 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-11-19 16:52:17,177 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-11-19 16:52:17,479 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-19 16:52:17,479 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-11-19 16:52:17,482 [ scc.git] DEBUG Calling 'git fetch origin pull/88/head' 2024-11-19 16:52:17,791 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-19 16:52:17,791 [ scc.git] DEBUG * branch refs/pull/88/head -> FETCH_HEAD 2024-11-19 16:52:17,794 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:17,794 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:17,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:17,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-19 16:52:17,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:17,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-19 16:52:17,823 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-11-19 16:52:17,823 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-11-19 16:52:17,823 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-19 16:52:17,823 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-19 16:52:17,823 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:52:17,823 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:52:17,828 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-19 16:52:17,834 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-19 16:52:17,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:17,978 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-19 16:52:17,984 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-19 16:52:17,989 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-11-19 16:52:17,993 [ scc.config] DEBUG Found github.token 2024-11-19 16:52:17,994 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-11-19 16:52:17,994 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-19 16:52:18,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:18,004 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-19 16:52:18,019 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-19 16:52:18,019 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-19 16:52:18,019 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-11-19 16:52:18,019 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:52:18,020 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:52:18,025 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-19 16:52:18,031 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-19 16:52:18,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:18,402 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-19 16:52:18,408 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-19 16:52:18,413 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-11-19 16:52:18,417 [ scc.config] DEBUG Found github.token 2024-11-19 16:52:18,417 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-11-19 16:52:18,418 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...295b3c79ae9a35f8c588400f25e14fbcab329926' 2024-11-19 16:52:18,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:18,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 88 (Update gha) 295b3c79ae9a35f8c588400f25e14fbcab329926' 2024-11-19 16:52:18,437 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:18,439 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-19 16:52:18,439 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 8 +++++--- 2024-11-19 16:52:18,439 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 4 deletions(-) 2024-11-19 16:52:18,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:18,794 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:18,829 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:18,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:18,833 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:18,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:18,873 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c06a30> has no local changes 2024-11-19 16:52:18,873 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 88 jburel 'Update gha' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:18,881 [ scc.git] DEBUG [detached HEAD ca4e82b] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:18,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:18,882 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:19,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-11-19 16:52:19,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-11-19 16:52:19,820 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:52:20,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-11-19 16:52:20,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:21,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:52:21,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-11-19 16:52:22,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:22,291 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-11-19 16:52:22,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-11-19 16:52:22,752 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:52:23,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-11-19 16:52:23,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:24,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:52:24,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-11-19 16:52:25,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:25,136 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-11-19 16:52:25,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-11-19 16:52:25,620 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-19 16:52:26,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-11-19 16:52:26,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:27,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:52:27,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-11-19 16:52:27,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:27,879 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-11-19 16:52:28,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-11-19 16:52:28,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-11-19 16:52:29,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-11-19 16:52:29,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-11-19 16:52:30,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-11-19 16:52:30,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-11-19 16:52:30,773 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:30,773 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-19 16:52:30,773 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:30,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:30,779 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:30,784 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:30,784 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:30,789 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:30,794 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:30,794 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-11-19 16:52:31,123 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-11-19 16:52:31,124 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-11-19 16:52:31,128 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-11-19 16:52:31,411 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-11-19 16:52:31,411 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-11-19 16:52:31,414 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-11-19 16:52:31,692 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-11-19 16:52:31,692 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-11-19 16:52:31,696 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:31,697 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:31,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:31,701 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-11-19 16:52:31,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:31,711 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-11-19 16:52:31,719 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:31,722 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-11-19 16:52:31,722 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-11-19 16:52:31,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:31,857 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-11-19 16:52:31,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:31,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-11-19 16:52:31,877 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-19 16:52:31,890 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:31,893 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-11-19 16:52:31,893 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-11-19 16:52:32,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:32,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-11-19 16:52:32,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:32,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-11-19 16:52:32,263 [ scc.git] DEBUG Auto-merging package-lock.json 2024-11-19 16:52:32,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:32,266 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-11-19 16:52:32,266 [ scc.git] DEBUG package.json | 2 +- 2024-11-19 16:52:32,267 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-11-19 16:52:32,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:32,630 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:32,665 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:32,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:32,669 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:32,703 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:32,709 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc6436e640> has no local changes 2024-11-19 16:52:32,709 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:32,717 [ scc.git] DEBUG [detached HEAD 6b0e1de] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:32,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:32,717 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:33,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-11-19 16:52:33,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-11-19 16:52:34,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-19 16:52:34,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:35,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-19 16:52:35,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:35,439 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-11-19 16:52:35,439 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:35,439 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-19 16:52:35,439 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:35,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:35,446 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:35,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:35,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:35,455 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:35,460 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:35,460 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-19 16:52:35,767 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-11-19 16:52:35,768 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-19 16:52:35,771 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:35,772 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:35,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:35,776 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-19 16:52:35,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:35,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-19 16:52:35,794 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:35,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:35,965 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:36,000 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:36,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:36,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:36,041 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:36,046 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc6437fbe0> has no local changes 2024-11-19 16:52:36,046 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:36,053 [ scc.git] DEBUG [detached HEAD 2e9ddd4] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:36,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:36,054 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:36,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-11-19 16:52:36,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-11-19 16:52:37,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-11-19 16:52:37,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-11-19 16:52:38,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-19 16:52:38,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:39,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-19 16:52:39,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:39,774 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-19 16:52:39,774 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:39,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-19 16:52:39,774 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:39,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:39,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:39,785 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:39,785 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:39,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:39,795 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:39,795 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-11-19 16:52:40,108 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-11-19 16:52:40,108 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-11-19 16:52:40,112 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:40,112 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:40,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:40,117 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-19 16:52:40,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:40,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-19 16:52:40,136 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-11-19 16:52:40,137 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:40,139 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-11-19 16:52:40,139 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-11-19 16:52:40,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:40,279 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:40,315 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:40,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:40,320 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:40,354 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:40,359 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc643277f0> has no local changes 2024-11-19 16:52:40,359 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:40,367 [ scc.git] DEBUG [detached HEAD cb45184] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:40,367 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:40,367 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:40,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-11-19 16:52:41,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-11-19 16:52:41,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-11-19 16:52:42,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-19 16:52:42,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:43,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-19 16:52:43,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:43,463 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-19 16:52:43,463 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:43,464 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-19 16:52:43,464 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:43,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:43,469 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:43,474 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:43,474 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:43,479 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:43,484 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:43,484 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-19 16:52:43,805 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-11-19 16:52:43,805 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-19 16:52:43,808 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:43,808 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:43,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:43,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-19 16:52:43,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:43,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-19 16:52:43,833 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG Auto-merging setup.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-11-19 16:52:43,833 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:52:43,833 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:52:43,838 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-19 16:52:43,844 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-19 16:52:43,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:43,979 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-19 16:52:43,984 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-19 16:52:43,989 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - setup.py - omero_signup/urls.py --conflicts 2024-11-19 16:52:43,993 [ scc.config] DEBUG Found github.token 2024-11-19 16:52:43,993 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-11-19 16:52:43,993 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:44,028 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:44,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:44,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:44,068 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:44,074 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64327670> has no local changes 2024-11-19 16:52:44,074 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:44,081 [ scc.git] DEBUG [detached HEAD a94c5b1] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:44,082 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:44,082 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:44,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-11-19 16:52:44,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-11-19 16:52:45,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-11-19 16:52:45,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-19 16:52:46,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:46,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-19 16:52:47,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:47,251 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-19 16:52:47,251 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:47,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-19 16:52:47,251 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:47,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:47,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:47,261 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:47,261 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:47,266 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:47,271 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:47,271 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-11-19 16:52:47,607 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-11-19 16:52:47,607 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-11-19 16:52:47,611 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:47,611 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:47,611 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:47,616 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-11-19 16:52:47,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:47,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-11-19 16:52:47,639 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-11-19 16:52:47,641 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-11-19 16:52:47,643 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-11-19 16:52:47,643 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-11-19 16:52:47,643 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-11-19 16:52:47,643 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-11-19 16:52:47,643 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-11-19 16:52:47,644 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-11-19 16:52:47,644 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-11-19 16:52:47,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:47,811 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:47,846 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:47,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:47,851 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:47,886 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:47,892 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64338bb0> has no local changes 2024-11-19 16:52:47,892 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:47,901 [ scc.git] DEBUG [detached HEAD d117455] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:47,901 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:47,901 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:48,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-11-19 16:52:48,263 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:48,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-19 16:52:48,264 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,268 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:48,273 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:48,273 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:48,278 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:48,283 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:48,283 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:48,283 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,287 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:48,322 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:48,360 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:48,365 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc642fc2e0> has no local changes 2024-11-19 16:52:48,365 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:48,396 [ scc.git] DEBUG [detached HEAD 33d7f89] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:48,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:48,397 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:48,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-11-19 16:52:48,693 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:48,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-19 16:52:48,693 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,698 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:48,703 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:48,703 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:48,708 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:48,712 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:48,713 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:48,713 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,717 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:48,752 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:48,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:48,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:48,790 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:48,795 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64389e50> has no local changes 2024-11-19 16:52:48,795 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:48,802 [ scc.git] DEBUG [detached HEAD 00e29e5] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:48,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:48,803 [ scc.git] INFO Overriding base-branch from master to main 2024-11-19 16:52:48,803 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:49,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-11-19 16:52:49,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-11-19 16:52:50,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-11-19 16:52:50,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-11-19 16:52:51,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-19 16:52:51,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:52,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-19 16:52:52,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:52,524 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-19 16:52:52,524 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:52,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-19 16:52:52,525 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:52,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:52,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-11-19 16:52:52,535 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:52,535 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-11-19 16:52:52,540 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-11-19 16:52:52,545 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:52,545 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-11-19 16:52:52,868 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-11-19 16:52:52,868 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-11-19 16:52:52,872 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:52,873 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:52,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:52,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-19 16:52:52,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:52,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-19 16:52:52,895 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-11-19 16:52:52,895 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-11-19 16:52:52,895 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:52:52,896 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:52:52,901 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-19 16:52:52,906 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-19 16:52:53,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:53,070 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-19 16:52:53,075 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-19 16:52:53,079 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-11-19 16:52:53,084 [ scc.config] DEBUG Found github.token 2024-11-19 16:52:53,084 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-11-19 16:52:53,084 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:53,118 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,123 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:53,157 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:53,162 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64397fa0> has no local changes 2024-11-19 16:52:53,162 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:53,169 [ scc.git] DEBUG [detached HEAD 856ca3f] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:53,170 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:53,170 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:53,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-11-19 16:52:53,497 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:53,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-19 16:52:53,497 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,502 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:53,506 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:53,507 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:53,511 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:53,516 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:53,516 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:53,516 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,521 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:53,555 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:53,594 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:53,599 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc64c45dc0> has no local changes 2024-11-19 16:52:53,599 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:53,606 [ scc.git] DEBUG [detached HEAD ae49c09] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:53,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:53,607 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:53,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-11-19 16:52:53,917 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:53,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-19 16:52:53,918 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,922 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:53,926 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:53,927 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:53,931 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:53,936 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:53,936 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:53,937 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,937 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,941 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:53,975 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:53,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:53,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:54,014 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:54,020 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc642b6640> has no local changes 2024-11-19 16:52:54,020 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:54,027 [ scc.git] DEBUG [detached HEAD 1d95b3d] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:54,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:54,027 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:54,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-11-19 16:52:54,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-11-19 16:52:55,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-11-19 16:52:55,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-19 16:52:56,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:52:56,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-19 16:52:57,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:52:57,070 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-11-19 16:52:57,070 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:52:57,070 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-19 16:52:57,070 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:57,070 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:57,076 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-19 16:52:57,081 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:52:57,081 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-19 16:52:57,086 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-19 16:52:57,091 [ scc.git] DEBUG Already up to date. 2024-11-19 16:52:57,091 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-11-19 16:52:57,442 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-11-19 16:52:57,442 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-11-19 16:52:57,446 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:52:57,446 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:57,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:57,451 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-19 16:52:57,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:57,460 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-19 16:52:57,470 [ scc.git] DEBUG Auto-merging Dockerfile 2024-11-19 16:52:57,470 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-11-19 16:52:57,470 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:52:57,470 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:52:57,475 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-19 16:52:57,482 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-19 16:52:57,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:52:57,620 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-19 16:52:57,625 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-19 16:52:57,630 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-11-19 16:52:57,634 [ scc.config] DEBUG Found github.token 2024-11-19 16:52:57,634 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-11-19 16:52:57,634 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:52:57,669 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:52:57,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:52:57,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:52:57,708 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:52:57,714 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc6430f340> has no local changes 2024-11-19 16:52:57,714 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:52:57,722 [ scc.git] DEBUG [detached HEAD c708535] merge master -Dorg -Ssuccess-only 2024-11-19 16:52:57,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:52:57,722 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-19 16:52:57,722 [ scc.repo] DEBUG ## PRs found: 2024-11-19 16:52:58,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-19 16:52:58,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-19 16:52:59,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-19 16:52:59,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-19 16:53:00,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:53:00,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-19 16:53:01,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-19 16:53:01,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:53:01,518 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-19 16:53:01,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-19 16:53:02,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-19 16:53:03,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-19 16:53:03,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-19 16:53:04,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-19 16:53:04,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-19 16:53:05,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-19 16:53:05,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-19 16:53:05,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-19 16:53:06,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-19 16:53:06,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-19 16:53:06,791 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-19 16:53:07,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-19 16:53:07,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-19 16:53:08,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-19 16:53:08,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-19 16:53:08,929 [ scc.repo] DEBUG ## Branches found: 2024-11-19 16:53:08,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-19 16:53:08,930 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:53:08,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:53:08,935 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-19 16:53:08,940 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-19 16:53:08,940 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-19 16:53:08,945 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-19 16:53:08,950 [ scc.git] DEBUG Already up to date. 2024-11-19 16:53:08,951 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-19 16:53:09,277 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-19 16:53:09,277 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-19 16:53:09,281 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-19 16:53:09,598 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-19 16:53:09,599 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-19 16:53:09,602 [ scc.git] DEBUG ## Unique users: [] 2024-11-19 16:53:09,602 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:53:09,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:53:09,607 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-19 16:53:09,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:53:09,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-19 16:53:09,628 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-19 16:53:09,628 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-19 16:53:09,628 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-19 16:53:09,629 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-19 16:53:09,633 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-19 16:53:09,639 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-19 16:53:09,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:09,834 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-19 16:53:09,841 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-19 16:53:09,846 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#250](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-19 16:53:09,850 [ scc.config] DEBUG Found github.token 2024-11-19 16:53:09,851 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-19 16:53:09,851 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-19 16:53:09,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:53:09,860 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-19 16:53:09,869 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-19 16:53:09,871 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-19 16:53:09,871 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-19 16:53:10,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:10,223 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-19 16:53:10,259 [ scc.git] DEBUG Get sha1 of %s 2024-11-19 16:53:10,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-19 16:53:10,264 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:53:10,297 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:53:10,303 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc642c6e20> has no local changes 2024-11-19 16:53:10,303 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:53:10,311 [ scc.git] DEBUG [detached HEAD c178f3b] merge master -Dorg -Ssuccess-only 2024-11-19 16:53:10,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:10,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-19 16:53:10,381 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-11-19 16:53:10,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:10,646 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-11-19 16:53:10,650 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-11-19 16:53:11,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:11,027 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-11-19 16:53:11,031 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-11-19 16:53:11,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:11,432 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-11-19 16:53:11,436 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-11-19 16:53:11,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:11,825 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-11-19 16:53:12,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:12,213 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-11-19 16:53:12,217 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-11-19 16:53:12,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:12,638 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-11-19 16:53:12,643 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-11-19 16:53:13,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:13,028 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-11-19 16:53:13,033 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-11-19 16:53:13,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:13,443 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-11-19 16:53:13,447 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-11-19 16:53:13,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:13,827 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-11-19 16:53:13,832 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-11-19 16:53:14,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:14,217 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-11-19 16:53:14,221 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-11-19 16:53:14,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:14,625 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-11-19 16:53:14,629 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-11-19 16:53:15,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:15,023 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-11-19 16:53:15,027 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-11-19 16:53:15,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:15,419 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-11-19 16:53:15,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:15,809 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-11-19 16:53:16,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:16,197 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-11-19 16:53:16,201 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-11-19 16:53:16,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:16,587 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-11-19 16:53:16,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:16,973 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-11-19 16:53:17,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:17,363 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-11-19 16:53:17,367 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-11-19 16:53:17,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:17,752 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-11-19 16:53:17,757 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-11-19 16:53:18,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:18,145 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-11-19 16:53:18,150 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-11-19 16:53:18,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:18,539 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-11-19 16:53:18,543 [ scc.config] DEBUG Found submodule.scripts.url 2024-11-19 16:53:18,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-19 16:53:18,926 [ scc.config] DEBUG Found submodule.scripts.branch 2024-11-19 16:53:18,926 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-19 16:53:18,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7efc6815b820> has local changes 2024-11-19 16:53:19,000 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 577 Rdornier 'Fill rois' - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 596 Tom-TBT 'Dynamic lut for figure' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating a8f380f..4bf017c Previously merged: - PR 495 dependabot[bot] 'Bump cookie and socket.io' - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 484 barrettMCW 'improved mirroring' - PR 494 dependabot[bot] 'Bump webpack from 5.82.0 to 5.96.1' - PR 489 dependabot[bot] 'Bump send and express' - PR 477 dependabot[bot] 'Bump ws and socket.io' - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 485 Tom-TBT 'Dynamic LUT for iviewer' - PR 488 will-moore 'Mobile layout' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 90 jburel 'Update gha' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 88 jburel 'Update gha' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#250 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/250/)' 2024-11-19 16:53:19,013 [ scc.git] DEBUG [detached HEAD d160f3c] merge master -Dorg -Ssuccess-only 2024-11-19 16:53:19,013 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-11-19 16:53:19,013 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-19 16:53:19,013 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,013 [ scc.merge] INFO 2024-11-19 16:53:19,013 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,013 [ scc.merge] INFO - PR 398 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `d9953e4`' 2024-11-19 16:53:19,013 [ scc.merge] INFO 2024-11-19 16:53:19,013 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-11-19 16:53:19,013 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,013 [ scc.merge] INFO 2024-11-19 16:53:19,013 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,013 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-11-19 16:53:19,013 [ scc.merge] INFO 2024-11-19 16:53:19,013 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-11-19 16:53:19,013 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,013 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-11-19 16:53:19,013 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,013 [ scc.merge] INFO 2024-11-19 16:53:19,013 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-11-19 16:53:19,014 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-11-19 16:53:19,014 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-11-19 16:53:19,014 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-19 16:53:19,014 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Repository: ome/omero-figure 2024-11-19 16:53:19,014 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-11-19 16:53:19,014 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,014 [ scc.merge] INFO 2024-11-19 16:53:19,014 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 577 Rdornier 'Fill rois' 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-11-19 16:53:19,014 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-11-19 16:53:19,015 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Repository: ome/omero-gallery 2024-11-19 16:53:19,015 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-11-19 16:53:19,015 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-11-19 16:53:19,015 [ scc.merge] INFO Updating a8f380f..4bf017c 2024-11-19 16:53:19,015 [ scc.merge] INFO Previously merged: 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 495 dependabot[bot] 'Bump cookie and socket.io' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 486 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 484 barrettMCW 'improved mirroring' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 494 dependabot[bot] 'Bump webpack from 5.82.0 to 5.96.1' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 489 dependabot[bot] 'Bump send and express' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 477 dependabot[bot] 'Bump ws and socket.io' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 482 will-moore 'Support ?collapse_left/right and ?full_page=true' 2024-11-19 16:53:19,015 [ scc.merge] INFO 2024-11-19 16:53:19,015 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-11-19 16:53:19,015 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 485 Tom-TBT 'Dynamic LUT for iviewer' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout' 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Repository: ome/omero-mapr 2024-11-19 16:53:19,016 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-11-19 16:53:19,016 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 90 jburel 'Update gha' 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Repository: ome/omero-metadata 2024-11-19 16:53:19,016 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 88 jburel 'Update gha' 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Repository: ome/omero-parade 2024-11-19 16:53:19,016 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-11-19 16:53:19,016 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-11-19 16:53:19,016 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,016 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-11-19 16:53:19,016 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,016 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: ome/omero-rois 2024-11-19 16:53:19,017 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: ome/omero-signup 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: ome/omero-upload 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-11-19 16:53:19,017 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-11-19 16:53:19,017 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,017 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,017 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-19 16:53:19,017 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-11-19 16:53:19,018 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-11-19 16:53:19,018 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-11-19 16:53:19,018 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Repository: ome/scripts 2024-11-19 16:53:19,018 [ scc.merge] INFO Excluded PRs: 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-19 16:53:19,018 [ scc.merge] INFO Already up to date. 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Merged PRs: 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-19 16:53:19,018 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-19 16:53:19,018 [ scc.merge] INFO 2024-11-19 16:53:19,018 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-19 16:53:19,018 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-19 16:53:19,023 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-19 16:53:19,027 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-19 16:53:19,032 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-19 16:53:19,037 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-19 16:53:19,042 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-19 16:53:19,046 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-19 16:53:19,051 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-19 16:53:19,055 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-19 16:53:19,060 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,064 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,065 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-19 16:53:19,065 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-19 16:53:19,069 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-19 16:53:19,074 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-19 16:53:19,078 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,083 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-19 16:53:19,083 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-19 16:53:19,087 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-19 16:53:19,092 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-19 16:53:19,097 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-19 16:53:19,101 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-19 16:53:19,106 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-19 16:53:19,110 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-19 16:53:19,115 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-19 16:53:19,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-19 16:53:19,120 [ scc.git] DEBUG Calling 'git remote' 2024-11-19 16:53:19,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.9.4-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD e751592] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 173cac0 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 24444fe6 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from a8f380f nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from d9953e4 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from fc20959 nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD 962798f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-19 16:54:02,834 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-19 16:54:11,849 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-19 16:54:14,252 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-19 16:54:18,753 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-19 16:54:58,001 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS