Started by upstream project "Trigger" build number 289 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision fa96199a010876372e5f8a6d8ad1a96e00b44f43 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Commit message: "Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4" > git rev-list --no-walk fa96199a010876372e5f8a6d8ad1a96e00b44f43 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 252 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.0-py3-none-any.whl (23 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-24 00:41:26,309 [ scc.config] DEBUG Found github.token 2024-11-24 00:41:26,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-24 00:41:26,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:26,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:27,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-24 00:41:27,265 [ scc.gh] DEBUG 4071 remaining from 5000 (Reset at 00:11 2024-11-24 00:41:27,266 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:27,270 [ scc.git] DEBUG Check current status 2024-11-24 00:41:27,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:27,273 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-24 00:41:27,273 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:27,322 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-24 00:41:27,325 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-24 00:41:27,328 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-24 00:41:27,331 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-24 00:41:27,335 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-24 00:41:27,338 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-24 00:41:27,342 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-24 00:41:27,345 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-24 00:41:27,349 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-24 00:41:27,352 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-24 00:41:27,355 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-24 00:41:27,358 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-24 00:41:27,362 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-24 00:41:27,364 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-24 00:41:27,368 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-24 00:41:27,372 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-24 00:41:27,375 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-24 00:41:27,378 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-24 00:41:27,380 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-24 00:41:27,383 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-24 00:41:27,386 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-24 00:41:27,390 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-24 00:41:27,395 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:27,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-24 00:41:28,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:28,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:29,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:29,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:29,413 [ scc.git] DEBUG Resetting... 2024-11-24 00:41:29,413 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-24 00:41:29,422 [ scc.git] DEBUG HEAD is now at fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-24 00:41:29,422 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-24 00:41:29,517 [ scc.git] DEBUG Check current status 2024-11-24 00:41:29,517 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:29,522 [ scc.git] DEBUG fa96199 Merge pull request #397 from ome/dependabot/submodules/omero-mapr-3a505e4 2024-11-24 00:41:29,522 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:29,568 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-24 00:41:29,570 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-24 00:41:29,573 [ scc.git] DEBUG 173cac06778e91d3a13b6084c62d95108290cb9f omero-cli-render (v0.8.1-1-g173cac0) 2024-11-24 00:41:29,576 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-24 00:41:29,579 [ scc.git] DEBUG 24444fe6bf35af27230c28e466f9819b08853118 omero-figure (v7.1.0-90-g24444fe6) 2024-11-24 00:41:29,583 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-24 00:41:29,585 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-11-24 00:41:29,589 [ scc.git] DEBUG a8f380fabfd839b946e5a5f613f1fce07abb3815 omero-iviewer (v0.14.0-3-ga8f380f) 2024-11-24 00:41:29,592 [ scc.git] DEBUG 3a505e457ba14320cef0b0f7ba2577026a4fdf9c omero-mapr (v0.5.2-13-g3a505e4) 2024-11-24 00:41:29,594 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-24 00:41:29,598 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-24 00:41:29,606 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-24 00:41:29,610 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-24 00:41:29,613 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-24 00:41:29,616 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-24 00:41:29,620 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-24 00:41:29,623 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-24 00:41:29,626 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-24 00:41:29,629 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-24 00:41:29,632 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-24 00:41:29,635 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-24 00:41:29,639 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-24 00:41:29,639 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-24 00:41:29,640 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-24 00:41:29,640 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-24 00:41:29,640 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-24 00:41:29,640 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-24 00:41:29,640 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:41:29,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-24 00:41:30,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/404 HTTP/1.1" 200 None 2024-11-24 00:41:30,393 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:41:30,393 [ scc.repo] DEBUG - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' 2024-11-24 00:41:30,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/403 HTTP/1.1" 200 None 2024-11-24 00:41:30,869 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:41:30,869 [ scc.repo] DEBUG - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' 2024-11-24 00:41:31,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/402 HTTP/1.1" 200 None 2024-11-24 00:41:31,344 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:41:31,344 [ scc.repo] DEBUG - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' 2024-11-24 00:41:31,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/401 HTTP/1.1" 200 None 2024-11-24 00:41:31,795 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:41:31,795 [ scc.repo] DEBUG - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' 2024-11-24 00:41:32,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/400 HTTP/1.1" 200 None 2024-11-24 00:41:32,302 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:41:32,302 [ scc.repo] DEBUG - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' 2024-11-24 00:41:32,302 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:41:32,302 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:41:32,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:32,307 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:41:32,311 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:41:32,312 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:41:32,316 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:41:32,319 [ scc.git] DEBUG Already up to date. 2024-11-24 00:41:32,320 [ scc.git] DEBUG Calling 'git fetch origin pull/400/head' 2024-11-24 00:41:32,616 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:41:32,616 [ scc.git] DEBUG * branch refs/pull/400/head -> FETCH_HEAD 2024-11-24 00:41:32,622 [ scc.git] DEBUG Calling 'git fetch origin pull/401/head' 2024-11-24 00:41:32,900 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:41:32,900 [ scc.git] DEBUG * branch refs/pull/401/head -> FETCH_HEAD 2024-11-24 00:41:32,905 [ scc.git] DEBUG Calling 'git fetch origin pull/402/head' 2024-11-24 00:41:33,204 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:41:33,204 [ scc.git] DEBUG * branch refs/pull/402/head -> FETCH_HEAD 2024-11-24 00:41:33,210 [ scc.git] DEBUG Calling 'git fetch origin pull/403/head' 2024-11-24 00:41:33,482 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:41:33,482 [ scc.git] DEBUG * branch refs/pull/403/head -> FETCH_HEAD 2024-11-24 00:41:33,488 [ scc.git] DEBUG Calling 'git fetch origin pull/404/head' 2024-11-24 00:41:33,805 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:41:33,805 [ scc.git] DEBUG * branch refs/pull/404/head -> FETCH_HEAD 2024-11-24 00:41:33,810 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:41:33,810 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:41:33,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:33,814 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...db6788f40dd40b70420f918846ddc1141d1421ae' 2024-11-24 00:41:33,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:33,822 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 400 (Bump omero-figure from `24444fe` to `e0b0d1a`) db6788f40dd40b70420f918846ddc1141d1421ae' 2024-11-24 00:41:33,838 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:41:33,840 [ scc.git] DEBUG omero-figure | 2 +- 2024-11-24 00:41:33,840 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-24 00:41:33,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:33,975 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7fb2c3f4441c320f0acba3cad5c653bbd806c115' 2024-11-24 00:41:33,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:33,983 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 401 (Bump omero-iviewer from `a8f380f` to `387b490`) 7fb2c3f4441c320f0acba3cad5c653bbd806c115' 2024-11-24 00:41:34,106 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:41:34,109 [ scc.git] DEBUG omero-iviewer | 2 +- 2024-11-24 00:41:34,109 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-24 00:41:34,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:34,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46e621e553a9940e287cf9ee2233b4693aaa0189' 2024-11-24 00:41:34,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:34,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 402 (Bump omero-cli-render from `173cac0` to `369753f`) 46e621e553a9940e287cf9ee2233b4693aaa0189' 2024-11-24 00:41:34,521 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:41:34,523 [ scc.git] DEBUG omero-cli-render | 2 +- 2024-11-24 00:41:34,524 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-24 00:41:34,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:34,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...88a282828cb12175b52fc007377a8cdc0e9d635c' 2024-11-24 00:41:34,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:34,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 403 (Bump omero-gallery from `56f4435` to `acd798d`) 88a282828cb12175b52fc007377a8cdc0e9d635c' 2024-11-24 00:41:34,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:41:34,854 [ scc.git] DEBUG omero-gallery | 2 +- 2024-11-24 00:41:34,854 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-24 00:41:35,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:35,146 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...11e950b09debfa7bb30673cfaba28bc0ad0a1524' 2024-11-24 00:41:35,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:35,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 404 (Bump omero-mapr from `3a505e4` to `c45d76c`) 11e950b09debfa7bb30673cfaba28bc0ad0a1524' 2024-11-24 00:41:35,412 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:41:35,415 [ scc.git] DEBUG omero-mapr | 2 +- 2024-11-24 00:41:35,415 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-24 00:41:35,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:35,552 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:41:35,608 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out '369753f92660d19b577ebebdbe97fb9fd44c0a43' 2024-11-24 00:41:35,626 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1' 2024-11-24 00:41:35,637 [ scc.git] DEBUG Submodule path 'omero-gallery': checked out 'acd798d9a0fc1cf9874ee29192f1ee7a725d6739' 2024-11-24 00:41:35,756 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '387b490bcf895c0ca66022efe3f6c77dfce9c7ee' 2024-11-24 00:41:35,773 [ scc.git] DEBUG Submodule path 'omero-mapr': checked out 'c45d76c33d0bfb1d2ace28ec37c696c9ecee4646' 2024-11-24 00:41:35,774 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:41:35,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:41:35,778 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:41:37,184 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff64f30f220> has no local changes 2024-11-24 00:41:37,185 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:41:37,268 [ scc.git] DEBUG [detached HEAD c81b15d] merge master -Dorg -Snone 2024-11-24 00:41:37,268 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-24 00:41:37,268 [ scc.merge] INFO Already up to date. 2024-11-24 00:41:37,268 [ scc.merge] INFO 2024-11-24 00:41:37,268 [ scc.merge] INFO Merged PRs: 2024-11-24 00:41:37,268 [ scc.merge] INFO - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' 2024-11-24 00:41:37,268 [ scc.merge] INFO - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' 2024-11-24 00:41:37,268 [ scc.merge] INFO - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' 2024-11-24 00:41:37,268 [ scc.merge] INFO - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' 2024-11-24 00:41:37,269 [ scc.merge] INFO - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' 2024-11-24 00:41:37,269 [ scc.merge] INFO 2024-11-24 00:41:37,269 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-24 00:41:37,269 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-duplicate': checked out '4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96' Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' Submodule path 'omero-parade': checked out 'fb5ae86bde41d34018ff4da10991a34b29e61f4b' Submodule path 'omero-upload': checked out '100f6ae42e2c955ffb7cd1e854eb82079476119b' Submodule path 'omero-weberror': checked out '70b01edc650d59445c1b8508e86c29ab069b2b8f' Submodule path 'omero-webtest': checked out '5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-11-24 00:41:46,171 [ scc.config] DEBUG Found github.token 2024-11-24 00:41:46,174 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-24 00:41:46,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:46,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:41:47,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-24 00:41:47,101 [ scc.gh] DEBUG 4053 remaining from 5000 (Reset at 00:11 2024-11-24 00:41:47,102 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:47,106 [ scc.git] DEBUG Check current status 2024-11-24 00:41:47,107 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:47,110 [ scc.git] DEBUG c81b15d merge master -Dorg -Snone 2024-11-24 00:41:47,110 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:47,156 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-24 00:41:47,159 [ scc.git] DEBUG +4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-11-24 00:41:47,162 [ scc.git] DEBUG 369753f92660d19b577ebebdbe97fb9fd44c0a43 omero-cli-render (v0.8.1-6-g369753f) 2024-11-24 00:41:47,165 [ scc.git] DEBUG +11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-11-24 00:41:47,168 [ scc.git] DEBUG e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1 omero-figure (v7.1.0-122-ge0b0d1ae) 2024-11-24 00:41:47,171 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-24 00:41:47,174 [ scc.git] DEBUG acd798d9a0fc1cf9874ee29192f1ee7a725d6739 omero-gallery (v3.4.3-3-gacd798d) 2024-11-24 00:41:47,775 [ scc.git] DEBUG 387b490bcf895c0ca66022efe3f6c77dfce9c7ee omero-iviewer (v0.14.0-29-g387b490) 2024-11-24 00:41:48,057 [ scc.git] DEBUG c45d76c33d0bfb1d2ace28ec37c696c9ecee4646 omero-mapr (v0.5.2-22-gc45d76c) 2024-11-24 00:41:48,061 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-24 00:41:48,357 [ scc.git] DEBUG +fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-11-24 00:41:48,360 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-24 00:41:48,363 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-24 00:41:48,366 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-24 00:41:48,369 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-24 00:41:48,372 [ scc.git] DEBUG +100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-11-24 00:41:48,374 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-24 00:41:48,377 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-24 00:41:48,385 [ scc.git] DEBUG +70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-11-24 00:41:48,388 [ scc.git] DEBUG +5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-11-24 00:41:48,391 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-24 00:41:48,394 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-24 00:41:48,398 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:48,399 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-24 00:41:48,401 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-11-24 00:41:48,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-11-24 00:41:49,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:49,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:49,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:50,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:50,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:41:50,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-24 00:41:50,327 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:50,330 [ scc.git] DEBUG Check current status 2024-11-24 00:41:50,331 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:50,335 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-11-24 00:41:50,335 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:50,380 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:50,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-11-24 00:41:51,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:51,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:51,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:52,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:52,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:41:52,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:41:52,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-24 00:41:52,400 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:52,406 [ scc.git] DEBUG Check current status 2024-11-24 00:41:52,406 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:52,411 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-11-24 00:41:52,411 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:52,458 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:52,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-11-24 00:41:53,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:53,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:54,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:54,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:54,516 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:41:54,567 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:41:54,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-24 00:41:54,569 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:54,574 [ scc.git] DEBUG Check current status 2024-11-24 00:41:54,575 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:54,579 [ scc.git] DEBUG 369753f Merge pull request #68 from jburel/build 2024-11-24 00:41:54,580 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:54,629 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:54,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-11-24 00:41:55,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:55,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:56,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:56,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:56,673 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:41:56,725 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:41:56,726 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-24 00:41:56,726 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:56,730 [ scc.git] DEBUG Check current status 2024-11-24 00:41:56,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:56,734 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-11-24 00:41:56,734 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:56,789 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:57,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-11-24 00:41:57,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:41:57,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:41:58,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:41:58,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:41:58,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:41:58,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:41:58,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-24 00:41:58,844 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:41:58,849 [ scc.git] DEBUG Check current status 2024-11-24 00:41:58,850 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:41:58,909 [ scc.git] DEBUG e0b0d1ae Merge pull request #577 from Rdornier/fill-rois 2024-11-24 00:41:58,910 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:41:58,963 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:41:59,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-11-24 00:41:59,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:00,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:00,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:00,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:00,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:01,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:01,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-24 00:42:01,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:01,049 [ scc.git] DEBUG Check current status 2024-11-24 00:42:01,050 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:01,054 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-11-24 00:42:01,054 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:01,101 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:01,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-11-24 00:42:01,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:02,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:02,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:03,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:03,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:03,189 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:03,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-24 00:42:03,191 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:03,197 [ scc.git] DEBUG Check current status 2024-11-24 00:42:03,198 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:03,204 [ scc.git] DEBUG acd798d Merge pull request #111 from ome/dependabot/npm_and_yarn/semver-5.7.2 2024-11-24 00:42:03,204 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:03,254 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:03,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-11-24 00:42:04,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:04,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:04,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:05,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:05,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:05,356 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:05,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-24 00:42:05,357 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:05,363 [ scc.git] DEBUG Check current status 2024-11-24 00:42:05,363 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:05,369 [ scc.git] DEBUG 387b490 Merge pull request #485 from Tom-TBT/dynamic_lut 2024-11-24 00:42:05,369 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:05,418 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:05,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-11-24 00:42:06,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:06,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:07,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:07,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:07,436 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:07,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:07,485 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-24 00:42:07,485 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:07,491 [ scc.git] DEBUG Check current status 2024-11-24 00:42:07,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:07,497 [ scc.git] DEBUG c45d76c Merge pull request #92 from jburel/build 2024-11-24 00:42:07,497 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:07,548 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:07,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-11-24 00:42:08,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:08,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:09,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:09,553 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:09,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:09,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-24 00:42:09,601 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:09,607 [ scc.git] DEBUG Check current status 2024-11-24 00:42:09,607 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:09,614 [ scc.git] DEBUG fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-24 00:42:09,614 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:09,668 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:10,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-11-24 00:42:10,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:10,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:11,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:11,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:11,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:11,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:11,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-24 00:42:11,740 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:11,745 [ scc.git] DEBUG Check current status 2024-11-24 00:42:11,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:11,751 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-11-24 00:42:11,752 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:11,802 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:12,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-11-24 00:42:12,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:12,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:13,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:13,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:13,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:13,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:13,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-24 00:42:13,854 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:13,860 [ scc.git] DEBUG Check current status 2024-11-24 00:42:13,860 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:13,865 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-11-24 00:42:13,865 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:13,922 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:14,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-11-24 00:42:14,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:15,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:15,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:15,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:15,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:15,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:15,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-24 00:42:15,976 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:15,980 [ scc.git] DEBUG Check current status 2024-11-24 00:42:15,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:15,984 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-11-24 00:42:15,985 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:16,028 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:16,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-11-24 00:42:16,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:17,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:17,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:18,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:18,056 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:18,117 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:18,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-24 00:42:18,119 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:18,126 [ scc.git] DEBUG Check current status 2024-11-24 00:42:18,126 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:18,131 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-24 00:42:18,132 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:18,182 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:18,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-11-24 00:42:18,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:19,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:19,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:20,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:20,187 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:20,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:20,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-24 00:42:20,238 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:20,246 [ scc.git] DEBUG Check current status 2024-11-24 00:42:20,246 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:20,253 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-11-24 00:42:20,253 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:20,306 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:20,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-24 00:42:20,587 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-24 00:42:20,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-11-24 00:42:21,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:21,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:22,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:22,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:22,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:22,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:22,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-24 00:42:22,629 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:22,635 [ scc.git] DEBUG Check current status 2024-11-24 00:42:22,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:22,639 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-11-24 00:42:22,640 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:22,683 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:23,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-11-24 00:42:23,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:23,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:24,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:24,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:24,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:24,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-24 00:42:24,742 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:24,748 [ scc.git] DEBUG Check current status 2024-11-24 00:42:24,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:24,754 [ scc.git] DEBUG deab817 update setup-python to v4 2024-11-24 00:42:24,754 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:24,803 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:25,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-11-24 00:42:25,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:26,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:26,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:26,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:26,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:26,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:26,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-24 00:42:26,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:26,904 [ scc.git] DEBUG Check current status 2024-11-24 00:42:26,904 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:26,910 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-24 00:42:26,910 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:26,962 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:26,962 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-11-24 00:42:27,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-11-24 00:42:27,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:28,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:28,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:28,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:28,979 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:29,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:29,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-24 00:42:29,021 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:29,028 [ scc.git] DEBUG Check current status 2024-11-24 00:42:29,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:29,033 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-11-24 00:42:29,033 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:29,079 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:29,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-24 00:42:29,411 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-24 00:42:29,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-11-24 00:42:30,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:30,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:31,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:31,320 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:31,361 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:31,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-24 00:42:31,362 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:31,367 [ scc.git] DEBUG Check current status 2024-11-24 00:42:31,368 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:31,372 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-11-24 00:42:31,372 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:31,414 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:31,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-24 00:42:31,723 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-24 00:42:31,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-11-24 00:42:32,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:32,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:33,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:33,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:33,620 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:33,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:33,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-24 00:42:33,665 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:33,671 [ scc.git] DEBUG Check current status 2024-11-24 00:42:33,671 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:33,676 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-24 00:42:33,676 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:33,727 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:34,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-11-24 00:42:34,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:34,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:35,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:35,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:35,738 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:35,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:35,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-24 00:42:35,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-24 00:42:35,789 [ scc.git] DEBUG Check current status 2024-11-24 00:42:35,789 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:35,841 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-24 00:42:35,841 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:35,889 [ scc.config] DEBUG Found remote.origin.url 2024-11-24 00:42:35,890 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-24 00:42:36,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-24 00:42:36,163 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-24 00:42:36,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-11-24 00:42:36,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-24 00:42:37,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-24 00:42:37,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-24 00:42:37,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-24 00:42:38,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:38,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:38,041 [ scc.git] DEBUG Resetting... 2024-11-24 00:42:38,042 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-24 00:42:38,052 [ scc.git] DEBUG HEAD is now at c81b15d merge master -Dorg -Snone 2024-11-24 00:42:38,052 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-24 00:42:38,108 [ scc.git] DEBUG Submodule path 'omero-cli-duplicate': checked out '027b3e695d5b225955918c53ef8c81e0d5bc6bf4' 2024-11-24 00:42:38,123 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '9b73dd9dbdeb36dbdb675b02661d253052fca0f0' 2024-11-24 00:42:38,154 [ scc.git] DEBUG Submodule path 'omero-parade': checked out '5d441c250912a98d8a87771f78dde8b54c8e12d6' 2024-11-24 00:42:38,178 [ scc.git] DEBUG Submodule path 'omero-upload': checked out 'aca9e9cad82a08e2e3d37d71cb374b37c90e4693' 2024-11-24 00:42:38,195 [ scc.git] DEBUG Submodule path 'omero-weberror': checked out 'adfa132f23a1b12ca2d2ec53ebba54c760fe2d07' 2024-11-24 00:42:38,207 [ scc.git] DEBUG Submodule path 'omero-webtest': checked out '8da48e116184f1ebb28aa9629748afdfb0282ae5' 2024-11-24 00:42:38,216 [ scc.git] DEBUG Check current status 2024-11-24 00:42:38,216 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-24 00:42:38,222 [ scc.git] DEBUG c81b15d merge master -Dorg -Snone 2024-11-24 00:42:38,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-24 00:42:38,273 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-11-24 00:42:38,276 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-11-24 00:42:38,278 [ scc.git] DEBUG 369753f92660d19b577ebebdbe97fb9fd44c0a43 omero-cli-render (v0.8.1-6-g369753f) 2024-11-24 00:42:38,281 [ scc.git] DEBUG 9b73dd9dbdeb36dbdb675b02661d253052fca0f0 omero-cli-zarr (v0.5.5-7-g9b73dd9) 2024-11-24 00:42:38,285 [ scc.git] DEBUG e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1 omero-figure (v7.1.0-122-ge0b0d1ae) 2024-11-24 00:42:38,287 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-11-24 00:42:38,290 [ scc.git] DEBUG acd798d9a0fc1cf9874ee29192f1ee7a725d6739 omero-gallery (v3.4.3-3-gacd798d) 2024-11-24 00:42:38,294 [ scc.git] DEBUG 387b490bcf895c0ca66022efe3f6c77dfce9c7ee omero-iviewer (v0.14.0-29-g387b490) 2024-11-24 00:42:38,297 [ scc.git] DEBUG c45d76c33d0bfb1d2ace28ec37c696c9ecee4646 omero-mapr (v0.5.2-22-gc45d76c) 2024-11-24 00:42:38,300 [ scc.git] DEBUG fc2095901f5dfd24ecd29a99092283f136de04d5 omero-metadata (v0.13.0-1-gfc20959) 2024-11-24 00:42:38,302 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-11-24 00:42:38,305 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-11-24 00:42:38,308 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-11-24 00:42:38,310 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-11-24 00:42:38,314 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-11-24 00:42:38,316 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-11-24 00:42:38,319 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-11-24 00:42:38,321 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-11-24 00:42:38,324 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-11-24 00:42:38,326 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-11-24 00:42:38,329 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-11-24 00:42:38,333 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-11-24 00:42:38,335 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-24 00:42:38,335 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-24 00:42:38,335 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-24 00:42:38,335 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-24 00:42:38,335 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-24 00:42:38,335 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-24 00:42:38,335 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:42:38,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-11-24 00:42:39,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/404 HTTP/1.1" 200 None 2024-11-24 00:42:39,060 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:42:39,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/11e950b09debfa7bb30673cfaba28bc0ad0a1524 HTTP/1.1" 200 None 2024-11-24 00:42:40,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/11e950b09debfa7bb30673cfaba28bc0ad0a1524/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:40,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/11e950b09debfa7bb30673cfaba28bc0ad0a1524 HTTP/1.1" 200 None 2024-11-24 00:42:40,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/11e950b09debfa7bb30673cfaba28bc0ad0a1524?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:40,952 [ scc.repo] DEBUG - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' 2024-11-24 00:42:41,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/403 HTTP/1.1" 200 None 2024-11-24 00:42:41,423 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:42:41,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/88a282828cb12175b52fc007377a8cdc0e9d635c HTTP/1.1" 200 None 2024-11-24 00:42:42,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/88a282828cb12175b52fc007377a8cdc0e9d635c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:42,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/88a282828cb12175b52fc007377a8cdc0e9d635c HTTP/1.1" 200 None 2024-11-24 00:42:43,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/88a282828cb12175b52fc007377a8cdc0e9d635c?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:43,305 [ scc.repo] DEBUG - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' 2024-11-24 00:42:43,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/402 HTTP/1.1" 200 None 2024-11-24 00:42:43,768 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:42:44,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/46e621e553a9940e287cf9ee2233b4693aaa0189 HTTP/1.1" 200 None 2024-11-24 00:42:44,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/46e621e553a9940e287cf9ee2233b4693aaa0189/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:45,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/46e621e553a9940e287cf9ee2233b4693aaa0189 HTTP/1.1" 200 None 2024-11-24 00:42:45,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/46e621e553a9940e287cf9ee2233b4693aaa0189?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:45,587 [ scc.repo] DEBUG - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' 2024-11-24 00:42:46,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/401 HTTP/1.1" 200 None 2024-11-24 00:42:46,067 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:42:46,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7fb2c3f4441c320f0acba3cad5c653bbd806c115 HTTP/1.1" 200 None 2024-11-24 00:42:47,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7fb2c3f4441c320f0acba3cad5c653bbd806c115/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/7fb2c3f4441c320f0acba3cad5c653bbd806c115 HTTP/1.1" 200 None 2024-11-24 00:42:47,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/7fb2c3f4441c320f0acba3cad5c653bbd806c115?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:47,997 [ scc.repo] DEBUG - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' 2024-11-24 00:42:48,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/400 HTTP/1.1" 200 None 2024-11-24 00:42:48,434 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-24 00:42:48,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/db6788f40dd40b70420f918846ddc1141d1421ae HTTP/1.1" 200 None 2024-11-24 00:42:49,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/db6788f40dd40b70420f918846ddc1141d1421ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:49,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/db6788f40dd40b70420f918846ddc1141d1421ae HTTP/1.1" 200 None 2024-11-24 00:42:50,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/db6788f40dd40b70420f918846ddc1141d1421ae?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:50,300 [ scc.repo] DEBUG - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' 2024-11-24 00:42:50,301 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:42:50,301 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:50,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:50,307 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:42:50,313 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:42:50,313 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:42:50,319 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:42:50,326 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:50,326 [ scc.git] DEBUG Calling 'git fetch origin pull/400/head' 2024-11-24 00:42:50,642 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:42:50,642 [ scc.git] DEBUG * branch refs/pull/400/head -> FETCH_HEAD 2024-11-24 00:42:50,648 [ scc.git] DEBUG Calling 'git fetch origin pull/401/head' 2024-11-24 00:42:50,947 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:42:50,947 [ scc.git] DEBUG * branch refs/pull/401/head -> FETCH_HEAD 2024-11-24 00:42:50,953 [ scc.git] DEBUG Calling 'git fetch origin pull/402/head' 2024-11-24 00:42:51,265 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:42:51,265 [ scc.git] DEBUG * branch refs/pull/402/head -> FETCH_HEAD 2024-11-24 00:42:51,272 [ scc.git] DEBUG Calling 'git fetch origin pull/403/head' 2024-11-24 00:42:51,561 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:42:51,562 [ scc.git] DEBUG * branch refs/pull/403/head -> FETCH_HEAD 2024-11-24 00:42:51,569 [ scc.git] DEBUG Calling 'git fetch origin pull/404/head' 2024-11-24 00:42:51,853 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-11-24 00:42:51,853 [ scc.git] DEBUG * branch refs/pull/404/head -> FETCH_HEAD 2024-11-24 00:42:51,860 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:42:51,860 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:51,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:51,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...db6788f40dd40b70420f918846ddc1141d1421ae' 2024-11-24 00:42:51,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:51,880 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 400 (Bump omero-figure from `24444fe` to `e0b0d1a`) db6788f40dd40b70420f918846ddc1141d1421ae' 2024-11-24 00:42:51,887 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:52,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:52,025 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7fb2c3f4441c320f0acba3cad5c653bbd806c115' 2024-11-24 00:42:52,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:52,037 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 401 (Bump omero-iviewer from `a8f380f` to `387b490`) 7fb2c3f4441c320f0acba3cad5c653bbd806c115' 2024-11-24 00:42:52,042 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:52,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:52,406 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46e621e553a9940e287cf9ee2233b4693aaa0189' 2024-11-24 00:42:52,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:52,420 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 402 (Bump omero-cli-render from `173cac0` to `369753f`) 46e621e553a9940e287cf9ee2233b4693aaa0189' 2024-11-24 00:42:52,426 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:52,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:52,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...88a282828cb12175b52fc007377a8cdc0e9d635c' 2024-11-24 00:42:52,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:52,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 403 (Bump omero-gallery from `56f4435` to `acd798d`) 88a282828cb12175b52fc007377a8cdc0e9d635c' 2024-11-24 00:42:52,819 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:53,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...11e950b09debfa7bb30673cfaba28bc0ad0a1524' 2024-11-24 00:42:53,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:53,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 404 (Bump omero-mapr from `3a505e4` to `c45d76c`) 11e950b09debfa7bb30673cfaba28bc0ad0a1524' 2024-11-24 00:42:53,197 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:53,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:53,569 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:42:53,621 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:53,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:53,627 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:42:54,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 None 2024-11-24 00:42:54,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/issues/66 HTTP/1.1" 200 None 2024-11-24 00:42:55,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-11-24 00:42:55,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:42:55,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:42:56,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/commits/6a9ec1416390843e1243e924ff9d05acf2966875 HTTP/1.1" 200 None 2024-11-24 00:42:56,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/statuses/6a9ec1416390843e1243e924ff9d05acf2966875?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:42:56,748 [ scc.repo] DEBUG - PR 66 jburel 'Gateway 5 9 2' 2024-11-24 00:42:56,748 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:42:56,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-24 00:42:56,748 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:56,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:56,755 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:42:56,761 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:42:56,761 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:42:56,767 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:42:56,773 [ scc.git] DEBUG Already up to date. 2024-11-24 00:42:56,773 [ scc.git] DEBUG Calling 'git fetch origin pull/66/head' 2024-11-24 00:42:57,166 [ scc.git] DEBUG From https://github.com/ome/minimal-omero-client 2024-11-24 00:42:57,166 [ scc.git] DEBUG * branch refs/pull/66/head -> FETCH_HEAD 2024-11-24 00:42:57,171 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:42:57,172 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:57,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:57,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a9ec1416390843e1243e924ff9d05acf2966875' 2024-11-24 00:42:57,185 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:57,190 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 66 (Gateway 5 9 2) 6a9ec1416390843e1243e924ff9d05acf2966875' 2024-11-24 00:42:57,250 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:42:57,254 [ scc.git] DEBUG .github/workflows/maven.yml | 4 ++-- 2024-11-24 00:42:57,254 [ scc.git] DEBUG build.gradle | 4 ++-- 2024-11-24 00:42:57,254 [ scc.git] DEBUG pom.xml | 4 ++-- 2024-11-24 00:42:57,254 [ scc.git] DEBUG 3 files changed, 6 insertions(+), 6 deletions(-) 2024-11-24 00:42:57,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:42:57,385 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:42:57,429 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:57,429 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:57,435 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:42:57,478 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:42:57,486 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f193a239820> has no local changes 2024-11-24 00:42:57,486 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:42:57,496 [ scc.git] DEBUG [detached HEAD f8b2aa2] merge master -Dorg -Ssuccess-only 2024-11-24 00:42:57,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:42:57,496 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:42:57,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-11-24 00:42:58,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-11-24 00:42:58,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-11-24 00:42:58,787 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:42:58,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-24 00:42:58,787 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:42:58,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:42:58,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:42:58,798 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:42:58,798 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:42:58,803 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:42:58,813 [ scc.git] DEBUG Updating 027b3e6..4777ef8 2024-11-24 00:42:59,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/27 HTTP/1.1" 200 None 2024-11-24 00:43:00,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls/25 HTTP/1.1" 200 None 2024-11-24 00:43:00,116 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:43:00,117 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:00,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:00,123 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:43:00,166 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:00,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:00,172 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:43:00,211 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:43:00,217 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1938b18fa0> has no local changes 2024-11-24 00:43:00,218 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:43:00,226 [ scc.git] DEBUG [detached HEAD ca8b49a] merge master -Dorg -Ssuccess-only 2024-11-24 00:43:00,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:43:00,227 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:43:00,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-11-24 00:43:01,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/67 HTTP/1.1" 200 None 2024-11-24 00:43:01,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/67/comments HTTP/1.1" 200 None 2024-11-24 00:43:02,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/c0a8ee08d0597c486691d82901bc9bae40fe388b HTTP/1.1" 200 None 2024-11-24 00:43:02,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/c0a8ee08d0597c486691d82901bc9bae40fe388b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:03,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/c0a8ee08d0597c486691d82901bc9bae40fe388b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:03,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/c0a8ee08d0597c486691d82901bc9bae40fe388b HTTP/1.1" 200 None 2024-11-24 00:43:04,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/c0a8ee08d0597c486691d82901bc9bae40fe388b?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:04,060 [ scc.repo] DEBUG - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' 2024-11-24 00:43:04,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-11-24 00:43:05,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-11-24 00:43:05,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-11-24 00:43:06,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-11-24 00:43:06,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-11-24 00:43:07,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:07,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:08,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-11-24 00:43:08,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-11-24 00:43:08,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-11-24 00:43:09,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-11-24 00:43:09,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-11-24 00:43:09,888 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:43:09,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-24 00:43:09,888 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:09,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:09,893 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:43:09,899 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:43:09,899 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:43:09,904 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:43:09,910 [ scc.git] DEBUG Already up to date. 2024-11-24 00:43:09,910 [ scc.git] DEBUG Calling 'git fetch origin pull/67/head' 2024-11-24 00:43:10,661 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-11-24 00:43:10,661 [ scc.git] DEBUG * branch refs/pull/67/head -> FETCH_HEAD 2024-11-24 00:43:10,666 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:43:10,666 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:10,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:10,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c0a8ee08d0597c486691d82901bc9bae40fe388b' 2024-11-24 00:43:10,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:10,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 67 (omero render set: clarify help around settings for disabled channels) c0a8ee08d0597c486691d82901bc9bae40fe388b' 2024-11-24 00:43:10,706 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:10,709 [ scc.git] DEBUG src/omero_cli_render.py | 6 ++---- 2024-11-24 00:43:10,709 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 4 deletions(-) 2024-11-24 00:43:10,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:10,846 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:43:10,890 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:10,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:10,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:43:10,939 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:43:10,946 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936d09e80> has no local changes 2024-11-24 00:43:10,946 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 59 will-moore 'Apply settings to Plate' (status: failure) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:43:10,956 [ scc.git] DEBUG [detached HEAD dbcfcec] merge master -Dorg -Ssuccess-only 2024-11-24 00:43:10,957 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:43:10,957 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:43:11,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-11-24 00:43:11,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-11-24 00:43:12,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-11-24 00:43:12,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-11-24 00:43:13,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-24 00:43:13,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:14,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:14,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-24 00:43:15,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:15,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-11-24 00:43:16,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-11-24 00:43:16,096 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-11-24 00:43:16,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-11-24 00:43:17,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-11-24 00:43:17,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-11-24 00:43:18,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-24 00:43:18,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:19,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-11-24 00:43:19,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:19,503 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-24 00:43:19,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-11-24 00:43:20,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-11-24 00:43:20,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-24 00:43:21,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:21,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-11-24 00:43:22,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:22,267 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-11-24 00:43:22,267 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:43:22,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-24 00:43:22,268 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:22,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:22,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:43:22,281 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:43:22,282 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:43:22,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:43:22,298 [ scc.git] DEBUG Updating 9b73dd9..11d3587 2024-11-24 00:43:22,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/165 HTTP/1.1" 200 None 2024-11-24 00:43:22,844 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-11-24 00:43:23,237 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-24 00:43:23,237 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-11-24 00:43:23,243 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-11-24 00:43:23,844 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-24 00:43:23,844 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-11-24 00:43:23,849 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-11-24 00:43:24,249 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-11-24 00:43:24,250 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-11-24 00:43:24,254 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:43:24,254 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:24,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:24,260 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-24 00:43:24,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:24,272 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-24 00:43:24,376 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-24 00:43:24,377 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-24 00:43:24,377 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-24 00:43:24,377 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:43:24,377 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:43:24,383 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-24 00:43:24,389 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-11-24 00:43:24,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:24,516 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-11-24 00:43:24,523 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-24 00:43:24,529 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-11-24 00:43:24,535 [ scc.config] DEBUG Found github.token 2024-11-24 00:43:24,535 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-11-24 00:43:24,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-24 00:43:24,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:24,547 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-24 00:43:24,582 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-11-24 00:43:24,583 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-11-24 00:43:24,583 [ scc.git] DEBUG Auto-merging setup.py 2024-11-24 00:43:24,583 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-11-24 00:43:24,583 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-24 00:43:24,583 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-11-24 00:43:24,583 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-11-24 00:43:24,583 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:43:24,583 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:43:24,589 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-24 00:43:24,596 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-11-24 00:43:24,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:24,909 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-11-24 00:43:24,917 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-11-24 00:43:24,923 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-11-24 00:43:24,929 [ scc.config] DEBUG Found github.token 2024-11-24 00:43:24,929 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-11-24 00:43:24,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-24 00:43:24,935 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:24,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-11-24 00:43:24,953 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-11-24 00:43:24,953 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-11-24 00:43:24,954 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:24,957 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-11-24 00:43:24,957 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-11-24 00:43:24,957 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-11-24 00:43:24,957 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-11-24 00:43:24,957 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-11-24 00:43:24,957 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-11-24 00:43:25,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:25,297 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:43:25,340 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:25,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:25,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:43:25,389 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:43:25,396 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936d36fd0> has no local changes 2024-11-24 00:43:25,396 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:43:25,408 [ scc.git] DEBUG [detached HEAD c162917] merge master -Dorg -Ssuccess-only 2024-11-24 00:43:25,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:43:25,408 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:43:25,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-11-24 00:43:26,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-11-24 00:43:26,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-11-24 00:43:27,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599 HTTP/1.1" 200 None 2024-11-24 00:43:27,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/599/comments HTTP/1.1" 200 None 2024-11-24 00:43:27,746 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:28,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2 HTTP/1.1" 200 None 2024-11-24 00:43:28,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:29,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:29,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2 HTTP/1.1" 200 None 2024-11-24 00:43:30,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:30,053 [ scc.repo] DEBUG - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-11-24 00:43:30,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/598 HTTP/1.1" 200 None 2024-11-24 00:43:30,521 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:31,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525 HTTP/1.1" 200 None 2024-11-24 00:43:31,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:32,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:32,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/69b42637f74e4caf1feab8af6faae3757be92525 HTTP/1.1" 200 None 2024-11-24 00:43:33,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/69b42637f74e4caf1feab8af6faae3757be92525?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:33,014 [ scc.repo] DEBUG - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-11-24 00:43:33,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/597 HTTP/1.1" 200 None 2024-11-24 00:43:34,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596 HTTP/1.1" 200 None 2024-11-24 00:43:34,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/596/comments HTTP/1.1" 200 None 2024-11-24 00:43:34,488 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:35,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116 HTTP/1.1" 200 None 2024-11-24 00:43:35,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:36,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:36,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116 HTTP/1.1" 200 None 2024-11-24 00:43:36,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d7cf65c6bd74a52d16ef81ec52ae08fd899ed116?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:36,943 [ scc.repo] DEBUG - PR 596 Tom-TBT 'Dynamic lut for figure' 2024-11-24 00:43:37,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595 HTTP/1.1" 200 None 2024-11-24 00:43:37,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 200 None 2024-11-24 00:43:38,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/13200965/issues/595/comments?page=2 HTTP/1.1" 200 None 2024-11-24 00:43:38,356 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:38,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/669b6c735626e21f71f5215fa31b13e77a931671 HTTP/1.1" 200 None 2024-11-24 00:43:39,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/669b6c735626e21f71f5215fa31b13e77a931671/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:39,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/669b6c735626e21f71f5215fa31b13e77a931671/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:40,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/669b6c735626e21f71f5215fa31b13e77a931671 HTTP/1.1" 200 None 2024-11-24 00:43:40,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/669b6c735626e21f71f5215fa31b13e77a931671?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:40,767 [ scc.repo] DEBUG - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-24 00:43:41,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592 HTTP/1.1" 200 None 2024-11-24 00:43:41,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/592/comments HTTP/1.1" 200 None 2024-11-24 00:43:42,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-11-24 00:43:42,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:43,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:43,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/41a9df405c9f6580c89a64fc2c6eed778c431b1b HTTP/1.1" 200 None 2024-11-24 00:43:43,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/41a9df405c9f6580c89a64fc2c6eed778c431b1b?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:43,994 [ scc.repo] DEBUG - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-24 00:43:44,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591 HTTP/1.1" 200 None 2024-11-24 00:43:44,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/591/comments HTTP/1.1" 200 None 2024-11-24 00:43:44,962 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:45,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-11-24 00:43:45,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:46,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:46,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/339e655bba6f9b7283bd907272429ead97e7ca5d HTTP/1.1" 200 None 2024-11-24 00:43:47,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/339e655bba6f9b7283bd907272429ead97e7ca5d?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:47,195 [ scc.repo] DEBUG - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-11-24 00:43:47,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578 HTTP/1.1" 200 None 2024-11-24 00:43:48,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/578/comments HTTP/1.1" 200 None 2024-11-24 00:43:48,238 [ scc.repo] DEBUG # ... Include label: include 2024-11-24 00:43:48,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d98762f2c1c5d62b7b34786d20aaefeded861e20 HTTP/1.1" 200 None 2024-11-24 00:43:49,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d98762f2c1c5d62b7b34786d20aaefeded861e20/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:49,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d98762f2c1c5d62b7b34786d20aaefeded861e20/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:50,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/d98762f2c1c5d62b7b34786d20aaefeded861e20 HTTP/1.1" 200 None 2024-11-24 00:43:50,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/d98762f2c1c5d62b7b34786d20aaefeded861e20?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:50,709 [ scc.repo] DEBUG - PR 578 Rdornier 'Image outline' 2024-11-24 00:43:50,710 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:43:50,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-24 00:43:50,710 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:50,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:50,717 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:43:50,724 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:43:50,724 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:43:50,731 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:43:50,738 [ scc.git] DEBUG Already up to date. 2024-11-24 00:43:50,739 [ scc.git] DEBUG Calling 'git fetch origin pull/578/head' 2024-11-24 00:43:51,046 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:51,046 [ scc.git] DEBUG * branch refs/pull/578/head -> FETCH_HEAD 2024-11-24 00:43:51,051 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-11-24 00:43:51,358 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:51,358 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-11-24 00:43:51,363 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-11-24 00:43:51,667 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:51,668 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-11-24 00:43:51,673 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2024-11-24 00:43:52,111 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:52,111 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2024-11-24 00:43:52,116 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2024-11-24 00:43:52,415 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:52,415 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2024-11-24 00:43:52,419 [ scc.git] DEBUG Calling 'git fetch origin pull/598/head' 2024-11-24 00:43:52,703 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:52,704 [ scc.git] DEBUG * branch refs/pull/598/head -> FETCH_HEAD 2024-11-24 00:43:52,709 [ scc.git] DEBUG Calling 'git fetch origin pull/599/head' 2024-11-24 00:43:53,005 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-11-24 00:43:53,006 [ scc.git] DEBUG * branch refs/pull/599/head -> FETCH_HEAD 2024-11-24 00:43:53,011 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:43:53,012 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:53,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:53,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d98762f2c1c5d62b7b34786d20aaefeded861e20' 2024-11-24 00:43:53,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:53,031 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 578 (Image outline) d98762f2c1c5d62b7b34786d20aaefeded861e20' 2024-11-24 00:43:53,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:53,053 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 237 +++++++++++++++------ 2024-11-24 00:43:53,053 [ scc.git] DEBUG src/css/figure.css | 1 + 2024-11-24 00:43:53,053 [ scc.git] DEBUG src/js/models/panel_model.js | 31 +++ 2024-11-24 00:43:53,053 [ scc.git] DEBUG src/js/views/panel_view.js | 53 ++++- 2024-11-24 00:43:53,053 [ scc.git] DEBUG src/js/views/right_panel_view.js | 56 ++++- 2024-11-24 00:43:53,053 [ scc.git] DEBUG src/templates/rois_form.template.html | 68 +++++- 2024-11-24 00:43:53,053 [ scc.git] DEBUG 6 files changed, 371 insertions(+), 75 deletions(-) 2024-11-24 00:43:53,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:53,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-11-24 00:43:53,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:53,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Add Horizontal and Vertical Image Flipping Functionality) 339e655bba6f9b7283bd907272429ead97e7ca5d' 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/index.html 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-24 00:43:53,233 [ scc.git] DEBUG Auto-merging src/js/views/roi_modal_view.js 2024-11-24 00:43:53,233 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:53,238 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 71 +++++++++++++++++++- 2024-11-24 00:43:53,238 [ scc.git] DEBUG src/css/figure.css | 14 ++++ 2024-11-24 00:43:53,238 [ scc.git] DEBUG src/index.html | 1 + 2024-11-24 00:43:53,238 [ scc.git] DEBUG src/js/models/panel_model.js | 9 ++- 2024-11-24 00:43:53,239 [ scc.git] DEBUG src/js/views/panel_view.js | 4 +- 2024-11-24 00:43:53,239 [ scc.git] DEBUG src/js/views/right_panel_view.js | 75 +++++++++++++++++++++- 2024-11-24 00:43:53,239 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 10 +-- 2024-11-24 00:43:53,239 [ scc.git] DEBUG src/templates/image_display_options.template.html | 11 +++- 2024-11-24 00:43:53,239 [ scc.git] DEBUG 8 files changed, 178 insertions(+), 17 deletions(-) 2024-11-24 00:43:53,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:53,583 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-11-24 00:43:53,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:53,596 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 41a9df405c9f6580c89a64fc2c6eed778c431b1b' 2024-11-24 00:43:53,610 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:53,612 [ scc.git] DEBUG src/js/views/files.js | 33 ++++++++++++++++++++++++--------- 2024-11-24 00:43:53,612 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 9 deletions(-) 2024-11-24 00:43:53,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:53,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...669b6c735626e21f71f5215fa31b13e77a931671' 2024-11-24 00:43:53,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:53,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (Rotate image panel by 90°) 669b6c735626e21f71f5215fa31b13e77a931671' 2024-11-24 00:43:53,995 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-24 00:43:53,995 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-11-24 00:43:53,995 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2024-11-24 00:43:53,995 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-24 00:43:53,995 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/right_panel_view.js 2024-11-24 00:43:53,995 [ scc.git] DEBUG Auto-merging src/templates/image_display_options.template.html 2024-11-24 00:43:53,995 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/templates/image_display_options.template.html 2024-11-24 00:43:53,995 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:43:53,996 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:43:54,003 [ scc.git] DEBUG Calling 'git reset --hard 9b38d4ea1d218fe3855c71d4d0eddb68d8333cd0' 2024-11-24 00:43:54,013 [ scc.git] DEBUG HEAD is now at 9b38d4ea merge master -Dorg -Ssuccess-only: PR 592 (Filter owners and groups dropdown lists) 2024-11-24 00:43:54,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:54,347 [ scc.git] DEBUG Calling 'git merge-base e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1 669b6c735626e21f71f5215fa31b13e77a931671' 2024-11-24 00:43:54,354 [ scc.git] DEBUG Calling 'git diff --name-only e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1..e0b0d1ae8ea006c34c5e5ad3012cd8851e269ef1' 2024-11-24 00:43:54,361 [ scc.git] INFO - PR 595 Rdornier 'Rotate image panel by 90°' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - PR #578 Rdornier 'Image outline' - src/js/views/right_panel_view.js - PR #591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - src/templates/image_display_options.template.html - src/js/views/right_panel_view.js --conflicts 2024-11-24 00:43:54,367 [ scc.config] DEBUG Found github.token 2024-11-24 00:43:54,368 [ scc.git] DEBUG Adding comment to issue #595. 2024-11-24 00:43:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-figure/issues/595/comments HTTP/1.1" 201 2193 2024-11-24 00:43:55,115 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d7cf65c6bd74a52d16ef81ec52ae08fd899ed116' 2024-11-24 00:43:55,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:55,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Dynamic lut for figure) d7cf65c6bd74a52d16ef81ec52ae08fd899ed116' 2024-11-24 00:43:55,143 [ scc.git] DEBUG Auto-merging omero_figure/urls.py 2024-11-24 00:43:55,143 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-24 00:43:55,143 [ scc.git] DEBUG Auto-merging src/js/views/channel_slider_view.js 2024-11-24 00:43:55,144 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:55,148 [ scc.git] DEBUG omero_figure/urls.py | 3 +- 2024-11-24 00:43:55,148 [ scc.git] DEBUG src/css/figure.css | 5 +- 2024-11-24 00:43:55,148 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 7 +-- 2024-11-24 00:43:55,148 [ scc.git] DEBUG src/js/views/lutpicker.js | 84 ++++++++++++------------------ 2024-11-24 00:43:55,148 [ scc.git] DEBUG src/templates/channel_slider.template.html | 3 +- 2024-11-24 00:43:55,148 [ scc.git] DEBUG src/templates/lut_picker.template.html | 2 +- 2024-11-24 00:43:55,148 [ scc.git] DEBUG 6 files changed, 42 insertions(+), 62 deletions(-) 2024-11-24 00:43:55,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:55,534 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...69b42637f74e4caf1feab8af6faae3757be92525' 2024-11-24 00:43:55,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:55,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 598 (Query timestamps from all planes when C or Z dimensions are not filled) 69b42637f74e4caf1feab8af6faae3757be92525' 2024-11-24 00:43:55,560 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:55,562 [ scc.git] DEBUG omero_figure/omeroutils.py | 24 ++++++++++++++++++++++++ 2024-11-24 00:43:55,562 [ scc.git] DEBUG 1 file changed, 24 insertions(+) 2024-11-24 00:43:55,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:55,934 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2' 2024-11-24 00:43:55,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:55,949 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 599 (Patch label text selection and cue for dragging) 89c07e2f93a8e7f1e1c0a83aa0e4e4c7711092a2' 2024-11-24 00:43:55,966 [ scc.git] DEBUG Auto-merging src/css/figure.css 2024-11-24 00:43:55,967 [ scc.git] DEBUG Auto-merging src/index.html 2024-11-24 00:43:55,967 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2024-11-24 00:43:55,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:43:55,971 [ scc.git] DEBUG omero_figure/views.py | 2 +- 2024-11-24 00:43:55,972 [ scc.git] DEBUG package.json | 2 +- 2024-11-24 00:43:55,972 [ scc.git] DEBUG src/css/figure.css | 12 ++++++++++-- 2024-11-24 00:43:55,972 [ scc.git] DEBUG src/index.html | 2 +- 2024-11-24 00:43:55,972 [ scc.git] DEBUG src/js/views/right_panel_view.js | 4 +++- 2024-11-24 00:43:55,972 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 7 ++++--- 2024-11-24 00:43:55,972 [ scc.git] DEBUG 6 files changed, 20 insertions(+), 9 deletions(-) 2024-11-24 00:43:56,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:43:56,315 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:43:56,357 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:43:56,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:43:56,363 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:43:56,405 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:43:56,415 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936ceb2e0> has no local changes 2024-11-24 00:43:56,415 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 596 Tom-TBT 'Dynamic lut for figure' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:43:56,426 [ scc.git] DEBUG [detached HEAD 55211346] merge master -Dorg -Ssuccess-only 2024-11-24 00:43:56,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:43:56,427 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:43:56,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-11-24 00:43:57,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/30 HTTP/1.1" 200 None 2024-11-24 00:43:57,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/78876ee2f8ffe5862fa0ffc511d18131474eed3c HTTP/1.1" 200 None 2024-11-24 00:43:58,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/78876ee2f8ffe5862fa0ffc511d18131474eed3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:43:58,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/78876ee2f8ffe5862fa0ffc511d18131474eed3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:43:59,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/78876ee2f8ffe5862fa0ffc511d18131474eed3c HTTP/1.1" 200 None 2024-11-24 00:43:59,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/78876ee2f8ffe5862fa0ffc511d18131474eed3c?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:43:59,778 [ scc.repo] DEBUG - PR 30 jburel 'Build' 2024-11-24 00:44:00,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-11-24 00:44:00,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-11-24 00:44:01,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-24 00:44:01,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:02,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-11-24 00:44:02,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:02,565 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-11-24 00:44:02,565 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:02,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-24 00:44:02,565 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:02,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:02,572 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:02,577 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:02,577 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:02,583 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:02,588 [ scc.git] DEBUG Already up to date. 2024-11-24 00:44:02,588 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-11-24 00:44:02,922 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-11-24 00:44:02,922 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-11-24 00:44:02,927 [ scc.git] DEBUG Calling 'git fetch origin pull/30/head' 2024-11-24 00:44:03,492 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-11-24 00:44:03,492 [ scc.git] DEBUG * branch refs/pull/30/head -> FETCH_HEAD 2024-11-24 00:44:03,498 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:03,498 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:03,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:03,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-24 00:44:03,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:03,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-11-24 00:44:03,524 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-11-24 00:44:03,525 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:03,527 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-11-24 00:44:03,527 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-24 00:44:03,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:03,651 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78876ee2f8ffe5862fa0ffc511d18131474eed3c' 2024-11-24 00:44:03,658 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:03,665 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 30 (Build) 78876ee2f8ffe5862fa0ffc511d18131474eed3c' 2024-11-24 00:44:03,730 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:03,733 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-24 00:44:03,733 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-24 00:44:03,733 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-11-24 00:44:03,733 [ scc.git] DEBUG omero_fpbioimage/urls.py | 3 +-- 2024-11-24 00:44:03,733 [ scc.git] DEBUG 4 files changed, 28 insertions(+), 8 deletions(-) 2024-11-24 00:44:03,733 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-11-24 00:44:04,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:04,078 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:04,119 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:04,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:04,125 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:04,166 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:04,173 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936d0bd90> has no local changes 2024-11-24 00:44:04,173 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 30 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:04,182 [ scc.git] DEBUG [detached HEAD 5d0b056] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:04,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:04,183 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:44:04,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-11-24 00:44:04,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/112 HTTP/1.1" 200 None 2024-11-24 00:44:05,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None 2024-11-24 00:44:06,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:06,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:07,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/54df1054c2422d028a55d54c0a412c2568656a42 HTTP/1.1" 200 None 2024-11-24 00:44:07,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/54df1054c2422d028a55d54c0a412c2568656a42?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:07,440 [ scc.repo] DEBUG - PR 112 jburel 'Build' 2024-11-24 00:44:07,440 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:07,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-24 00:44:07,440 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:07,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:07,446 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:07,451 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:07,451 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:07,457 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:07,463 [ scc.git] DEBUG Already up to date. 2024-11-24 00:44:07,464 [ scc.git] DEBUG Calling 'git fetch origin pull/112/head' 2024-11-24 00:44:07,954 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-11-24 00:44:07,955 [ scc.git] DEBUG * branch refs/pull/112/head -> FETCH_HEAD 2024-11-24 00:44:07,960 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:07,960 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:07,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:07,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54df1054c2422d028a55d54c0a412c2568656a42' 2024-11-24 00:44:07,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:07,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 112 (Build) 54df1054c2422d028a55d54c0a412c2568656a42' 2024-11-24 00:44:08,095 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:08,098 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-24 00:44:08,098 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-24 00:44:08,098 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-11-24 00:44:08,098 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-11-24 00:44:08,098 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-11-24 00:44:08,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:08,235 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:08,287 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:08,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:08,294 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:08,337 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:08,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936d3eeb0> has no local changes 2024-11-24 00:44:08,346 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 112 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:08,357 [ scc.git] DEBUG [detached HEAD 1bae1c1] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:08,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:08,358 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:44:08,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-11-24 00:44:09,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-11-24 00:44:09,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-11-24 00:44:10,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496 HTTP/1.1" 200 None 2024-11-24 00:44:10,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/496/comments HTTP/1.1" 200 None 2024-11-24 00:44:11,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None 2024-11-24 00:44:11,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:12,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:12,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2be10ae76782b80eec916a57ba8656bf0a476b24 HTTP/1.1" 200 None 2024-11-24 00:44:12,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2be10ae76782b80eec916a57ba8656bf0a476b24?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:12,953 [ scc.repo] DEBUG - PR 496 will-moore 'Add changelog 0.15.0' 2024-11-24 00:44:13,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488 HTTP/1.1" 200 None 2024-11-24 00:44:13,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/488/comments HTTP/1.1" 200 None 2024-11-24 00:44:14,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/593f9e9786ebbec662de7093ef0030f7efa8df66 HTTP/1.1" 200 None 2024-11-24 00:44:14,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/593f9e9786ebbec662de7093ef0030f7efa8df66/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:15,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/593f9e9786ebbec662de7093ef0030f7efa8df66/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:15,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/593f9e9786ebbec662de7093ef0030f7efa8df66 HTTP/1.1" 200 None 2024-11-24 00:44:16,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/593f9e9786ebbec662de7093ef0030f7efa8df66?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:16,329 [ scc.repo] DEBUG - PR 488 will-moore 'Mobile layout' 2024-11-24 00:44:16,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-11-24 00:44:17,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-11-24 00:44:17,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-24 00:44:18,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:19,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-11-24 00:44:19,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:19,540 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-24 00:44:20,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-11-24 00:44:20,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-11-24 00:44:20,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-24 00:44:21,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:22,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-11-24 00:44:22,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:22,876 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-11-24 00:44:23,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-11-24 00:44:23,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-11-24 00:44:24,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-24 00:44:24,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:25,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-11-24 00:44:25,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:25,694 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-11-24 00:44:25,694 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:25,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-24 00:44:25,695 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:25,695 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:25,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:25,708 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:25,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:25,715 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:25,721 [ scc.git] DEBUG Already up to date. 2024-11-24 00:44:25,721 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-11-24 00:44:26,708 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-24 00:44:26,709 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-11-24 00:44:26,714 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-11-24 00:44:28,168 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-24 00:44:28,168 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-11-24 00:44:28,174 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-11-24 00:44:28,677 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-24 00:44:28,678 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-11-24 00:44:28,683 [ scc.git] DEBUG Calling 'git fetch origin pull/488/head' 2024-11-24 00:44:29,898 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-24 00:44:29,898 [ scc.git] DEBUG * branch refs/pull/488/head -> FETCH_HEAD 2024-11-24 00:44:29,904 [ scc.git] DEBUG Calling 'git fetch origin pull/496/head' 2024-11-24 00:44:30,187 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-11-24 00:44:30,187 [ scc.git] DEBUG * branch refs/pull/496/head -> FETCH_HEAD 2024-11-24 00:44:30,192 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:30,192 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:30,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:30,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-24 00:44:30,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:30,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-11-24 00:44:30,369 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-11-24 00:44:30,381 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:30,385 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-11-24 00:44:30,385 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-11-24 00:44:30,385 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-11-24 00:44:30,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:30,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-24 00:44:30,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:30,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-11-24 00:44:30,555 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-11-24 00:44:30,555 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-11-24 00:44:30,555 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-11-24 00:44:30,555 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-11-24 00:44:30,572 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:30,577 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-11-24 00:44:30,577 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-11-24 00:44:30,577 [ scc.git] DEBUG src/app/header.html | 5 + 2024-11-24 00:44:30,577 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-11-24 00:44:30,577 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-11-24 00:44:30,577 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-11-24 00:44:30,577 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-11-24 00:44:30,578 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-11-24 00:44:30,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:30,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-24 00:44:30,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:30,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-11-24 00:44:30,954 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-11-24 00:44:31,010 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:31,013 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-11-24 00:44:31,013 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-11-24 00:44:31,014 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-11-24 00:44:31,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:31,324 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...593f9e9786ebbec662de7093ef0030f7efa8df66' 2024-11-24 00:44:31,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:31,338 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 488 (Mobile layout) 593f9e9786ebbec662de7093ef0030f7efa8df66' 2024-11-24 00:44:31,901 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:31,907 [ scc.git] DEBUG css/app.css | 109 ++++++++++++++++++++++++------- 2024-11-24 00:44:31,907 [ scc.git] DEBUG src/app/index.html | 4 +- 2024-11-24 00:44:31,907 [ scc.git] DEBUG src/app/thumbnail-slider.html | 6 +- 2024-11-24 00:44:31,907 [ scc.git] DEBUG src/app/thumbnail-slider.js | 18 ++--- 2024-11-24 00:44:31,907 [ scc.git] DEBUG src/index-dev.html | 1 + 2024-11-24 00:44:31,907 [ scc.git] DEBUG src/index.html | 1 + 2024-11-24 00:44:31,908 [ scc.git] DEBUG src/utils/ui.js | 148 ++++++++++++++---------------------------- 2024-11-24 00:44:31,908 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 -- 2024-11-24 00:44:31,908 [ scc.git] DEBUG 8 files changed, 151 insertions(+), 140 deletions(-) 2024-11-24 00:44:32,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:32,049 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2be10ae76782b80eec916a57ba8656bf0a476b24' 2024-11-24 00:44:32,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:32,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 496 (Add changelog 0.15.0) 2be10ae76782b80eec916a57ba8656bf0a476b24' 2024-11-24 00:44:32,081 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:32,084 [ scc.git] DEBUG CHANGELOG.md | 9 +++++++++ 2024-11-24 00:44:32,084 [ scc.git] DEBUG 1 file changed, 9 insertions(+) 2024-11-24 00:44:32,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:32,431 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:32,472 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:32,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:32,478 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:32,519 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:32,527 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f193448f580> has no local changes 2024-11-24 00:44:32,528 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 488 will-moore 'Mobile layout' - PR 496 will-moore 'Add changelog 0.15.0' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:32,551 [ scc.git] DEBUG [detached HEAD 8dd22b6] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:32,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:32,552 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:44:32,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-11-24 00:44:33,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93 HTTP/1.1" 200 None 2024-11-24 00:44:33,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/93/comments HTTP/1.1" 200 None 2024-11-24 00:44:34,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5 HTTP/1.1" 200 None 2024-11-24 00:44:34,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:35,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/8bf7fcc622131bba16a86c21bf4076a1468b33e5 HTTP/1.1" 200 None 2024-11-24 00:44:36,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/8bf7fcc622131bba16a86c21bf4076a1468b33e5?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:36,216 [ scc.repo] DEBUG - PR 93 will-moore 'changelog 0.5.3' 2024-11-24 00:44:36,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-11-24 00:44:37,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-11-24 00:44:37,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-24 00:44:38,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:38,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-11-24 00:44:39,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:39,059 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-11-24 00:44:39,059 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:39,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-24 00:44:39,060 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:39,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:39,066 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:39,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:39,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:39,079 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:39,085 [ scc.git] DEBUG Already up to date. 2024-11-24 00:44:39,085 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-11-24 00:44:39,440 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-11-24 00:44:39,441 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-11-24 00:44:39,446 [ scc.git] DEBUG Calling 'git fetch origin pull/93/head' 2024-11-24 00:44:39,779 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-11-24 00:44:39,780 [ scc.git] DEBUG * branch refs/pull/93/head -> FETCH_HEAD 2024-11-24 00:44:39,785 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:39,785 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:39,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:39,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-24 00:44:39,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:39,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-11-24 00:44:39,816 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:39,819 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-11-24 00:44:39,819 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-11-24 00:44:39,819 [ scc.git] DEBUG requirements.txt | 2 +- 2024-11-24 00:44:39,820 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-11-24 00:44:39,820 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-11-24 00:44:39,820 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-11-24 00:44:39,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:39,954 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8bf7fcc622131bba16a86c21bf4076a1468b33e5' 2024-11-24 00:44:39,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:39,967 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 93 (changelog 0.5.3) 8bf7fcc622131bba16a86c21bf4076a1468b33e5' 2024-11-24 00:44:40,006 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:40,009 [ scc.git] DEBUG CHANGELOG.md | 12 ++++++++++++ 2024-11-24 00:44:40,009 [ scc.git] DEBUG 1 file changed, 12 insertions(+) 2024-11-24 00:44:40,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:40,341 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:40,388 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:40,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:40,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:40,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:40,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19344a16a0> has no local changes 2024-11-24 00:44:40,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 93 will-moore 'changelog 0.5.3' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:40,455 [ scc.git] DEBUG [detached HEAD 8dff89c] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:40,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:40,456 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:44:40,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-11-24 00:44:41,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/89 HTTP/1.1" 200 None 2024-11-24 00:44:41,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None 2024-11-24 00:44:42,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:42,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:44:43,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/dfc227486da13c78bc278fc534e59b40cbc97175 HTTP/1.1" 200 None 2024-11-24 00:44:43,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/dfc227486da13c78bc278fc534e59b40cbc97175?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:43,793 [ scc.repo] DEBUG - PR 89 jburel 'Build' 2024-11-24 00:44:44,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-11-24 00:44:44,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-11-24 00:44:45,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-24 00:44:45,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:46,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-11-24 00:44:46,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:46,669 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-24 00:44:47,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-11-24 00:44:47,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-11-24 00:44:48,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-24 00:44:48,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:44:49,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-11-24 00:44:49,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:44:49,565 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-24 00:44:49,565 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:49,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-24 00:44:49,565 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:49,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:49,573 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:49,578 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:49,578 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:49,585 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:49,592 [ scc.git] DEBUG Already up to date. 2024-11-24 00:44:49,593 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-11-24 00:44:50,232 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-24 00:44:50,232 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-11-24 00:44:50,237 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-11-24 00:44:50,767 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-24 00:44:50,767 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-11-24 00:44:50,772 [ scc.git] DEBUG Calling 'git fetch origin pull/89/head' 2024-11-24 00:44:51,357 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-11-24 00:44:51,357 [ scc.git] DEBUG * branch refs/pull/89/head -> FETCH_HEAD 2024-11-24 00:44:51,364 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:51,364 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:51,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:51,374 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-24 00:44:51,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:51,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-24 00:44:51,555 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-11-24 00:44:51,556 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-11-24 00:44:51,556 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-24 00:44:51,556 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-24 00:44:51,557 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:44:51,557 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:44:51,564 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-24 00:44:51,573 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-24 00:44:51,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:51,712 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-11-24 00:44:51,720 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-24 00:44:51,754 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-11-24 00:44:51,764 [ scc.config] DEBUG Found github.token 2024-11-24 00:44:51,765 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-11-24 00:44:51,765 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-24 00:44:51,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:51,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-24 00:44:51,849 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-11-24 00:44:51,849 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-11-24 00:44:51,849 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-11-24 00:44:51,849 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:44:51,850 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:44:51,857 [ scc.git] DEBUG Calling 'git reset --hard fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-24 00:44:51,867 [ scc.git] DEBUG HEAD is now at fc20959 Bump version: 0.13.0 → 0.13.1.dev0 2024-11-24 00:44:52,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:52,114 [ scc.git] DEBUG Calling 'git merge-base fc2095901f5dfd24ecd29a99092283f136de04d5 78e55539b68e351ed5ef202854718b49a37729a7' 2024-11-24 00:44:52,123 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..fc2095901f5dfd24ecd29a99092283f136de04d5' 2024-11-24 00:44:52,132 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-11-24 00:44:52,137 [ scc.config] DEBUG Found github.token 2024-11-24 00:44:52,137 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-11-24 00:44:52,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dfc227486da13c78bc278fc534e59b40cbc97175' 2024-11-24 00:44:52,142 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:52,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 89 (Build) dfc227486da13c78bc278fc534e59b40cbc97175' 2024-11-24 00:44:52,162 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:44:52,165 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-24 00:44:52,165 [ scc.git] DEBUG 1 file changed, 7 insertions(+), 5 deletions(-) 2024-11-24 00:44:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:44:52,504 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:52,549 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:52,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:52,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:52,598 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:52,605 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1934447700> has no local changes 2024-11-24 00:44:52,605 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:52,614 [ scc.git] DEBUG [detached HEAD b1c8a93] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:52,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:52,614 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:44:53,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-11-24 00:44:53,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-11-24 00:44:53,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-11-24 00:44:54,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-11-24 00:44:54,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-11-24 00:44:55,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-11-24 00:44:55,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-11-24 00:44:55,888 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:44:55,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-24 00:44:55,888 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:55,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:55,898 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:44:55,911 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:44:55,912 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:44:55,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:44:55,938 [ scc.git] DEBUG Updating 5d441c2..fb5ae86 2024-11-24 00:44:56,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None 2024-11-24 00:44:58,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None 2024-11-24 00:44:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None 2024-11-24 00:44:59,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None 2024-11-24 00:44:59,829 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:44:59,829 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:59,829 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:59,836 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:44:59,883 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:44:59,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:44:59,890 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:44:59,935 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:44:59,943 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19344475e0> has no local changes 2024-11-24 00:44:59,944 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:44:59,954 [ scc.git] DEBUG [detached HEAD fd51f9f] merge master -Dorg -Ssuccess-only 2024-11-24 00:44:59,954 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:44:59,955 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:00,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-11-24 00:45:00,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None 2024-11-24 00:45:01,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None 2024-11-24 00:45:01,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:02,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:45:02,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-11-24 00:45:03,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-24 00:45:03,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:04,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-11-24 00:45:04,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:04,643 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-11-24 00:45:04,644 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:04,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-24 00:45:04,644 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:04,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:04,652 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:04,658 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:04,658 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:04,664 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:04,671 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:04,672 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-24 00:45:04,999 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-11-24 00:45:04,999 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-24 00:45:05,004 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:05,004 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:05,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:05,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-24 00:45:05,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:05,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-11-24 00:45:05,035 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:05,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:05,191 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:05,235 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:05,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:05,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:05,287 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:05,307 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19344adac0> has no local changes 2024-11-24 00:45:05,307 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:05,320 [ scc.git] DEBUG [detached HEAD 745e5fa] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:05,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:05,321 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:05,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-11-24 00:45:06,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None 2024-11-24 00:45:06,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-24 00:45:07,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:07,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-24 00:45:08,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:08,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None 2024-11-24 00:45:08,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None 2024-11-24 00:45:08,991 [ scc.repo] DEBUG - PR 29 jburel 'Build' 2024-11-24 00:45:09,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-11-24 00:45:09,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-11-24 00:45:10,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-11-24 00:45:10,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-24 00:45:11,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:11,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-11-24 00:45:12,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:12,169 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-24 00:45:12,169 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:12,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-24 00:45:12,169 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:12,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:12,176 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:12,183 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:12,184 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:12,190 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:12,195 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:12,195 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-11-24 00:45:12,557 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-11-24 00:45:12,557 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-11-24 00:45:12,563 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2024-11-24 00:45:12,946 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-11-24 00:45:12,946 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2024-11-24 00:45:12,951 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:12,952 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:12,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:12,957 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-24 00:45:12,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:12,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-11-24 00:45:12,978 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-11-24 00:45:12,979 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:12,981 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-11-24 00:45:12,981 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-11-24 00:45:13,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:13,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-11-24 00:45:13,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:13,157 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24' 2024-11-24 00:45:13,167 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:13,169 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-24 00:45:13,169 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-24 00:45:13,170 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-) 2024-11-24 00:45:13,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:13,532 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:13,573 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:13,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:13,579 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:13,622 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:13,630 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1934499d30> has no local changes 2024-11-24 00:45:13,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:13,640 [ scc.git] DEBUG [detached HEAD 942b91a] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:13,640 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:13,640 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:14,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-11-24 00:45:14,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None 2024-11-24 00:45:14,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-11-24 00:45:15,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:15,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:45:16,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None 2024-11-24 00:45:16,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:16,774 [ scc.repo] DEBUG - PR 21 jburel 'Build' 2024-11-24 00:45:17,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-11-24 00:45:17,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-11-24 00:45:18,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-24 00:45:18,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:19,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-11-24 00:45:19,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:19,558 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-24 00:45:19,559 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:19,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-24 00:45:19,559 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:19,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:19,566 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:19,571 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:19,571 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:19,577 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:19,582 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:19,583 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-11-24 00:45:20,009 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-11-24 00:45:20,009 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-11-24 00:45:20,014 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2024-11-24 00:45:20,581 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-11-24 00:45:20,582 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2024-11-24 00:45:20,586 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:20,587 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:20,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:20,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-24 00:45:20,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:20,607 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-24 00:45:20,634 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG Auto-merging setup.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-11-24 00:45:20,635 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:45:20,635 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:45:20,642 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-24 00:45:20,650 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-11-24 00:45:20,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:20,812 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-11-24 00:45:20,819 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-11-24 00:45:20,825 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py --conflicts 2024-11-24 00:45:20,831 [ scc.config] DEBUG Found github.token 2024-11-24 00:45:20,831 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-11-24 00:45:20,831 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-11-24 00:45:20,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:20,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1' 2024-11-24 00:45:20,873 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:20,877 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-11-24 00:45:20,877 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-11-24 00:45:20,877 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-11-24 00:45:20,877 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-11-24 00:45:20,878 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-11-24 00:45:21,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:21,199 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:21,246 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:21,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:21,254 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:21,300 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:21,308 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1934458bb0> has no local changes 2024-11-24 00:45:21,308 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:21,318 [ scc.git] DEBUG [detached HEAD cd94527] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:21,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:21,319 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:21,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-11-24 00:45:22,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-11-24 00:45:22,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-11-24 00:45:23,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-24 00:45:23,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:24,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-11-24 00:45:24,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:24,479 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-24 00:45:24,479 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:24,479 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-24 00:45:24,479 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:24,479 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:24,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:24,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:24,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:24,498 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:24,505 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:24,505 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-11-24 00:45:24,979 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-11-24 00:45:24,979 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-11-24 00:45:24,983 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:24,983 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:24,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:24,990 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-11-24 00:45:24,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:25,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-11-24 00:45:25,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-11-24 00:45:25,022 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-11-24 00:45:25,024 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-11-24 00:45:25,024 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-11-24 00:45:25,024 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-11-24 00:45:25,024 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-11-24 00:45:25,025 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-11-24 00:45:25,025 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-11-24 00:45:25,025 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-11-24 00:45:25,025 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-11-24 00:45:25,025 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-11-24 00:45:25,025 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-11-24 00:45:25,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:25,167 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:25,211 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:25,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:25,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:25,262 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:25,270 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1934414be0> has no local changes 2024-11-24 00:45:25,270 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:25,281 [ scc.git] DEBUG [detached HEAD 73cf431] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:25,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:25,282 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-11-24 00:45:25,634 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:25,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-24 00:45:25,634 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:25,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:25,640 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:25,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:25,647 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:25,654 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:25,666 [ scc.git] DEBUG Updating aca9e9c..100f6ae 2024-11-24 00:45:26,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None 2024-11-24 00:45:26,243 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:26,243 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:26,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:26,249 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:26,292 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:26,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:26,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:26,338 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:26,344 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1936cf6d90> has no local changes 2024-11-24 00:45:26,345 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:26,353 [ scc.git] DEBUG [detached HEAD 16b6537] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:26,353 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:26,354 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:26,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-11-24 00:45:27,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-11-24 00:45:27,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe HTTP/1.1" 200 None 2024-11-24 00:45:28,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:28,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/7c51ced716d1ddf611131f23665ef14f262047fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:45:28,598 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:28,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-24 00:45:28,598 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:28,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:28,604 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:28,610 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:28,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:28,617 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:28,624 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:28,624 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:28,624 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:28,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:28,630 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:28,674 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:28,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:28,680 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:28,724 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:28,731 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1934468f10> has no local changes 2024-11-24 00:45:28,731 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Excluded PRs: - PR 20 jburel 'Build' (status: failure) Already up to date. Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:28,741 [ scc.git] DEBUG [detached HEAD 90c4b76] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:28,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:28,741 [ scc.git] INFO Overriding base-branch from master to main 2024-11-24 00:45:28,741 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:29,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-11-24 00:45:29,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None 2024-11-24 00:45:30,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/c84669ca960b4890f13c94f6aa75372539be9c7c HTTP/1.1" 200 None 2024-11-24 00:45:30,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/c84669ca960b4890f13c94f6aa75372539be9c7c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:31,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/c84669ca960b4890f13c94f6aa75372539be9c7c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:45:31,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-11-24 00:45:31,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-11-24 00:45:32,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-11-24 00:45:32,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-24 00:45:33,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:33,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-11-24 00:45:34,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:34,256 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-24 00:45:34,256 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:34,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-24 00:45:34,256 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:34,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:34,263 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-11-24 00:45:34,269 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:34,269 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-11-24 00:45:34,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-11-24 00:45:34,283 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:34,283 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-11-24 00:45:34,657 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-11-24 00:45:34,658 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-11-24 00:45:34,662 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:34,662 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:34,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:34,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-24 00:45:34,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:34,679 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-24 00:45:34,738 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-11-24 00:45:34,738 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-11-24 00:45:34,738 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:45:34,739 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:45:34,746 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-24 00:45:34,753 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-11-24 00:45:34,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:34,897 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-11-24 00:45:34,904 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-11-24 00:45:34,909 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-11-24 00:45:34,914 [ scc.config] DEBUG Found github.token 2024-11-24 00:45:34,914 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-11-24 00:45:34,914 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:34,954 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:34,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:34,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:34,998 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:35,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f193445de50> has no local changes 2024-11-24 00:45:35,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:35,014 [ scc.git] DEBUG [detached HEAD ab1147f] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:35,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:35,015 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:35,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-11-24 00:45:35,342 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:35,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-24 00:45:35,342 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:35,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:35,348 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:35,354 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:35,354 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:35,360 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:35,371 [ scc.git] DEBUG Updating adfa132..70b01ed 2024-11-24 00:45:35,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None 2024-11-24 00:45:35,958 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:35,959 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:35,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:35,965 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:36,006 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:36,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:36,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:36,051 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:36,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19343eaf70> has no local changes 2024-11-24 00:45:36,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:36,065 [ scc.git] DEBUG [detached HEAD 6d1dc98] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:36,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:36,066 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:36,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-11-24 00:45:36,403 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:36,403 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-24 00:45:36,403 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:36,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:36,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:36,416 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:36,416 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:36,422 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:36,433 [ scc.git] DEBUG Updating 8da48e1..5bfef29 2024-11-24 00:45:36,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None 2024-11-24 00:45:36,975 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:36,975 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:36,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:36,981 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:37,021 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:37,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:37,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:37,067 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:37,074 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f193443fee0> has no local changes 2024-11-24 00:45:37,075 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:37,083 [ scc.git] DEBUG [detached HEAD 9939b88] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:37,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:37,084 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:37,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-11-24 00:45:37,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-11-24 00:45:38,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-11-24 00:45:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-24 00:45:39,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:40,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-11-24 00:45:40,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:40,408 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-11-24 00:45:40,408 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:40,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-24 00:45:40,408 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:40,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:40,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-24 00:45:40,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:40,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-24 00:45:40,425 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-24 00:45:40,430 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:40,430 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-11-24 00:45:40,764 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-11-24 00:45:40,764 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-11-24 00:45:40,769 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:40,769 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:40,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:40,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-24 00:45:40,781 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:40,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-24 00:45:40,798 [ scc.git] DEBUG Auto-merging Dockerfile 2024-11-24 00:45:40,798 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-11-24 00:45:40,798 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:45:40,799 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:45:40,806 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-24 00:45:40,813 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-11-24 00:45:40,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:40,944 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-11-24 00:45:40,950 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-11-24 00:45:40,956 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-11-24 00:45:40,962 [ scc.config] DEBUG Found github.token 2024-11-24 00:45:40,962 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-11-24 00:45:40,962 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:41,003 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:41,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:41,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:41,049 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:41,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19343907f0> has no local changes 2024-11-24 00:45:41,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:41,067 [ scc.git] DEBUG [detached HEAD 3570fa8] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:41,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:41,068 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-24 00:45:41,068 [ scc.repo] DEBUG ## PRs found: 2024-11-24 00:45:41,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-24 00:45:41,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-24 00:45:42,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-24 00:45:42,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-24 00:45:43,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:43,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-24 00:45:44,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-24 00:45:44,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:44,532 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-24 00:45:44,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-24 00:45:45,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-24 00:45:45,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-24 00:45:46,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-24 00:45:46,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-24 00:45:47,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-24 00:45:47,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-24 00:45:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-24 00:45:48,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-24 00:45:49,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-24 00:45:49,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-24 00:45:49,520 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-24 00:45:50,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-24 00:45:50,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-24 00:45:50,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-24 00:45:51,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-24 00:45:51,461 [ scc.repo] DEBUG ## Branches found: 2024-11-24 00:45:51,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-24 00:45:51,461 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:51,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:51,468 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-24 00:45:51,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-24 00:45:51,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-24 00:45:51,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-24 00:45:51,486 [ scc.git] DEBUG Already up to date. 2024-11-24 00:45:51,486 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-24 00:45:51,968 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-24 00:45:51,969 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-24 00:45:51,974 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-24 00:45:52,305 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-11-24 00:45:52,305 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-24 00:45:52,311 [ scc.git] DEBUG ## Unique users: [] 2024-11-24 00:45:52,311 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:52,311 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:52,318 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-24 00:45:52,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:52,332 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-24 00:45:52,401 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-24 00:45:52,401 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-24 00:45:52,401 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-24 00:45:52,402 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-24 00:45:52,409 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-24 00:45:52,418 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-24 00:45:52,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:52,550 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-24 00:45:52,563 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-24 00:45:52,572 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#256](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-24 00:45:52,579 [ scc.config] DEBUG Found github.token 2024-11-24 00:45:52,580 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-24 00:45:52,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-24 00:45:52,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:52,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-24 00:45:52,603 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-24 00:45:52,606 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-24 00:45:52,606 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-24 00:45:52,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:52,942 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-24 00:45:52,988 [ scc.git] DEBUG Get sha1 of %s 2024-11-24 00:45:52,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-24 00:45:52,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:53,039 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:45:53,047 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f19343f0cd0> has no local changes 2024-11-24 00:45:53,047 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:45:53,056 [ scc.git] DEBUG [detached HEAD dc7666e] merge master -Dorg -Ssuccess-only 2024-11-24 00:45:53,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:45:53,057 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-24 00:45:53,139 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-11-24 00:45:53,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:53,355 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-11-24 00:45:53,362 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-11-24 00:45:53,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:53,752 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-11-24 00:45:53,759 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-11-24 00:45:54,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:54,140 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-11-24 00:45:54,148 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-11-24 00:45:54,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:54,523 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-11-24 00:45:54,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:54,899 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-11-24 00:45:54,905 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-11-24 00:45:55,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:55,319 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-11-24 00:45:55,325 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-11-24 00:45:55,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:55,714 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-11-24 00:45:55,719 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-11-24 00:45:56,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:56,093 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-11-24 00:45:56,097 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-11-24 00:45:56,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:56,486 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-11-24 00:45:56,491 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-11-24 00:45:56,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:56,877 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-11-24 00:45:56,883 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-11-24 00:45:57,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:57,267 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-11-24 00:45:57,273 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-11-24 00:45:57,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:57,661 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-11-24 00:45:57,666 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-11-24 00:45:58,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:58,060 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-11-24 00:45:58,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:58,449 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-11-24 00:45:58,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:58,827 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-11-24 00:45:58,833 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-11-24 00:45:59,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:59,218 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-11-24 00:45:59,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:59,602 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-11-24 00:45:59,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:45:59,984 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-11-24 00:45:59,989 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-11-24 00:46:00,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:46:00,369 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-11-24 00:46:00,375 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-11-24 00:46:00,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:46:00,767 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-11-24 00:46:00,771 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-11-24 00:46:01,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:46:01,149 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-11-24 00:46:01,154 [ scc.config] DEBUG Found submodule.scripts.url 2024-11-24 00:46:01,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-24 00:46:01,532 [ scc.config] DEBUG Found submodule.scripts.branch 2024-11-24 00:46:01,533 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-24 00:46:01,616 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f193829c220> has local changes 2024-11-24 00:46:01,616 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' Repository: ome/minimal-omero-client Already up to date. Merged PRs: - PR 66 jburel 'Gateway 5 9 2' Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Updating 027b3e6..4777ef8 Previously merged: - PR 27 jburel 'Build' - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 59 will-moore 'Apply settings to Plate' (status: failure) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating 9b73dd9..11d3587 Previously merged: - PR 165 jburel 'Build' Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 578 Rdornier 'Image outline' - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' - PR 592 will-moore 'Filter owners and groups dropdown lists' - PR 596 Tom-TBT 'Dynamic lut for figure' - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' Conflicting PRs (not included): - PR 595 Rdornier 'Rotate image panel by 90°' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 30 jburel 'Build' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 112 jburel 'Build' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 488 will-moore 'Mobile layout' - PR 496 will-moore 'Add changelog 0.15.0' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 93 will-moore 'changelog 0.5.3' Repository: ome/omero-metadata Already up to date. Merged PRs: - PR 89 jburel 'Build' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Updating 5d441c2..fb5ae86 Previously merged: - PR 133 jburel 'Build' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' Repository: ome/omero-prometheus-tools Excluded PRs: - PR 15 jburel 'Build' (status: failure) Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' - PR 29 jburel 'Build' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 21 jburel 'Build' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Updating aca9e9c..100f6ae Previously merged: - PR 13 jburel 'Build' Repository: ome/omero-virtual-microscope Excluded PRs: - PR 20 jburel 'Build' (status: failure) Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 17 jburel 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Updating adfa132..70b01ed Previously merged: - PR 24 jburel 'Build' Repository: openmicroscopy/omero-webtest Updating 8da48e1..5bfef29 Previously merged: - PR 36 jburel 'Build' Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#256 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/256/)' 2024-11-24 00:46:01,693 [ scc.git] DEBUG [detached HEAD 5539bbf] merge master -Dorg -Ssuccess-only 2024-11-24 00:46:01,694 [ scc.merge] INFO Repository: ome/omero-plugins 2024-11-24 00:46:01,694 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-11-24 00:46:01,694 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 400 dependabot[bot] 'Bump omero-figure from `24444fe` to `e0b0d1a`' 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 401 dependabot[bot] 'Bump omero-iviewer from `a8f380f` to `387b490`' 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 402 dependabot[bot] 'Bump omero-cli-render from `173cac0` to `369753f`' 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 403 dependabot[bot] 'Bump omero-gallery from `56f4435` to `acd798d`' 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 404 dependabot[bot] 'Bump omero-mapr from `3a505e4` to `c45d76c`' 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-11-24 00:46:01,694 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 66 jburel 'Gateway 5 9 2' 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-11-24 00:46:01,694 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-11-24 00:46:01,694 [ scc.merge] INFO Updating 027b3e6..4777ef8 2024-11-24 00:46:01,694 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 27 jburel 'Build' 2024-11-24 00:46:01,694 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO 2024-11-24 00:46:01,694 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-11-24 00:46:01,695 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' (status: failure) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-11-24 00:46:01,695 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 67 sbesson 'omero render set: clarify help around settings for disabled channels' 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-11-24 00:46:01,695 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-24 00:46:01,695 [ scc.merge] INFO Updating 9b73dd9..11d3587 2024-11-24 00:46:01,695 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 165 jburel 'Build' 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Repository: ome/omero-figure 2024-11-24 00:46:01,695 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 597 Rdornier 'Rounding zoom label in pdf' (user: Rdornier) 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-11-24 00:46:01,695 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,695 [ scc.merge] INFO 2024-11-24 00:46:01,695 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 578 Rdornier 'Image outline' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 591 MinaEnayat 'Add Horizontal and Vertical Image Flipping Functionality' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 596 Tom-TBT 'Dynamic lut for figure' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 598 Tom-TBT 'Query timestamps from all planes when C or Z dimensions are not filled' 2024-11-24 00:46:01,695 [ scc.merge] INFO - PR 599 Tom-TBT 'Patch label text selection and cue for dragging' 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 595 Rdornier 'Rotate image panel by 90°' 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-11-24 00:46:01,696 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 30 jburel 'Build' 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Repository: ome/omero-gallery 2024-11-24 00:46:01,696 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 112 jburel 'Build' 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-11-24 00:46:01,696 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-11-24 00:46:01,696 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 488 will-moore 'Mobile layout' 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 496 will-moore 'Add changelog 0.15.0' 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Repository: ome/omero-mapr 2024-11-24 00:46:01,696 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-11-24 00:46:01,696 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,696 [ scc.merge] INFO 2024-11-24 00:46:01,696 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,696 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 93 will-moore 'changelog 0.5.3' 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Repository: ome/omero-metadata 2024-11-24 00:46:01,697 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 89 jburel 'Build' 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Repository: ome/omero-parade 2024-11-24 00:46:01,697 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-11-24 00:46:01,697 [ scc.merge] INFO Updating 5d441c2..fb5ae86 2024-11-24 00:46:01,697 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 133 jburel 'Build' 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-11-24 00:46:01,697 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure) 2024-11-24 00:46:01,697 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Repository: ome/omero-rois 2024-11-24 00:46:01,697 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,697 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-24 00:46:01,697 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,697 [ scc.merge] INFO 2024-11-24 00:46:01,697 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 29 jburel 'Build' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Repository: ome/omero-signup 2024-11-24 00:46:01,698 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 21 jburel 'Build' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-11-24 00:46:01,698 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Repository: ome/omero-upload 2024-11-24 00:46:01,698 [ scc.merge] INFO Updating aca9e9c..100f6ae 2024-11-24 00:46:01,698 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 13 jburel 'Build' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-11-24 00:46:01,698 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 20 jburel 'Build' (status: failure) 2024-11-24 00:46:01,698 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-11-24 00:46:01,698 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure) 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-11-24 00:46:01,698 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,698 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,698 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-11-24 00:46:01,698 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-11-24 00:46:01,699 [ scc.merge] INFO Updating adfa132..70b01ed 2024-11-24 00:46:01,699 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 24 jburel 'Build' 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-11-24 00:46:01,699 [ scc.merge] INFO Updating 8da48e1..5bfef29 2024-11-24 00:46:01,699 [ scc.merge] INFO Previously merged: 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 36 jburel 'Build' 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-11-24 00:46:01,699 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Repository: ome/scripts 2024-11-24 00:46:01,699 [ scc.merge] INFO Excluded PRs: 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-24 00:46:01,699 [ scc.merge] INFO Already up to date. 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Merged PRs: 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,699 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-24 00:46:01,699 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-24 00:46:01,699 [ scc.merge] INFO 2024-11-24 00:46:01,700 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-24 00:46:01,700 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-11-24 00:46:01,707 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,712 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-11-24 00:46:01,712 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-11-24 00:46:01,717 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-11-24 00:46:01,723 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-11-24 00:46:01,728 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-11-24 00:46:01,732 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-11-24 00:46:01,738 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-11-24 00:46:01,744 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-11-24 00:46:01,750 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-11-24 00:46:01,758 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,764 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-11-24 00:46:01,765 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,771 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-11-24 00:46:01,771 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-11-24 00:46:01,776 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-11-24 00:46:01,782 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-11-24 00:46:01,788 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,794 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-11-24 00:46:01,794 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,800 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-11-24 00:46:01,801 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-11-24 00:46:01,806 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-11-24 00:46:01,813 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-11-24 00:46:01,819 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-11-24 00:46:01,825 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-11-24 00:46:01,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-11-24 00:46:01,831 [ scc.git] DEBUG Calling 'git remote' 2024-11-24 00:46:01,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.2 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD f454ccc] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 369753f nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 9b73dd9 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from e0b0d1ae nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from acd798d nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 387b490 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from c45d76c nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from fc20959 nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD ac0965e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-11-24 00:46:48,762 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-11-24 00:46:57,530 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-11-24 00:46:59,853 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-24 00:47:04,275 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-11-24 00:47:42,785 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS