![[Jenkins]](/jenkins/static/4f42acd4/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 315 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 42aacf25de17d376508a27f59445c75cb63b7903 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Commit message: "Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a" > git rev-list --no-walk 42aacf25de17d376508a27f59445c75cb63b7903 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 278 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-20 00:43:08,199 [ scc.config] DEBUG Found github.token 2024-12-20 00:43:08,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-20 00:43:08,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:08,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:09,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-20 00:43:09,195 [ scc.gh] DEBUG 4491 remaining from 5000 (Reset at 01:12 2024-12-20 00:43:09,195 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:09,200 [ scc.git] DEBUG Check current status 2024-12-20 00:43:09,200 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:09,203 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-20 00:43:09,204 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:09,265 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-20 00:43:09,364 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-20 00:43:09,782 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-20 00:43:09,856 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-20 00:43:09,862 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-20 00:43:10,017 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-20 00:43:10,151 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-20 00:43:10,154 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-20 00:43:10,158 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-20 00:43:10,161 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-20 00:43:10,365 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-20 00:43:10,368 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-20 00:43:10,372 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-20 00:43:10,375 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-20 00:43:10,430 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-20 00:43:10,433 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-20 00:43:10,436 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-20 00:43:10,440 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-20 00:43:10,506 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-20 00:43:10,569 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-20 00:43:10,573 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-20 00:43:10,577 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-20 00:43:10,581 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:10,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-20 00:43:11,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:11,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:12,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:12,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:12,562 [ scc.git] DEBUG Resetting... 2024-12-20 00:43:12,562 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-20 00:43:12,572 [ scc.git] DEBUG HEAD is now at 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-20 00:43:12,572 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-20 00:43:12,670 [ scc.git] DEBUG Check current status 2024-12-20 00:43:12,670 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:12,674 [ scc.git] DEBUG 42aacf2 Merge pull request #418 from ome/dependabot/submodules/omero-fpbioimage-3b6c05a 2024-12-20 00:43:12,674 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:12,719 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-20 00:43:12,722 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-20 00:43:12,725 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-20 00:43:12,728 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-20 00:43:12,733 [ scc.git] DEBUG 1dfb1389e449594defce3d4ac9f72df3fefb6e89 omero-figure (v7.1.0-235-g1dfb1389) 2024-12-20 00:43:12,736 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-20 00:43:12,739 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-20 00:43:12,742 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-20 00:43:12,745 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-20 00:43:12,749 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-20 00:43:12,753 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-20 00:43:12,755 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-12-20 00:43:12,758 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-12-20 00:43:12,761 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-12-20 00:43:12,764 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-20 00:43:12,766 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-20 00:43:12,769 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-20 00:43:12,771 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-12-20 00:43:12,774 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-20 00:43:12,777 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-20 00:43:12,779 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-20 00:43:12,783 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-20 00:43:12,784 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-20 00:43:12,784 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-20 00:43:12,784 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-20 00:43:12,784 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-20 00:43:12,784 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-20 00:43:12,784 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:43:13,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-20 00:43:13,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/427 HTTP/1.1" 200 None 2024-12-20 00:43:13,561 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:43:13,561 [ scc.repo] DEBUG - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' 2024-12-20 00:43:14,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/426 HTTP/1.1" 200 None 2024-12-20 00:43:14,030 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:43:14,030 [ scc.repo] DEBUG - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' 2024-12-20 00:43:14,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/425 HTTP/1.1" 200 None 2024-12-20 00:43:14,489 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:43:14,489 [ scc.repo] DEBUG - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' 2024-12-20 00:43:14,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/424 HTTP/1.1" 200 None 2024-12-20 00:43:14,950 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:43:14,950 [ scc.repo] DEBUG - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' 2024-12-20 00:43:15,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/423 HTTP/1.1" 200 None 2024-12-20 00:43:15,423 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:43:15,423 [ scc.repo] DEBUG - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' 2024-12-20 00:43:15,424 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:43:15,424 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:43:15,424 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:15,428 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:43:15,432 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:43:15,432 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:43:15,436 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:43:15,441 [ scc.git] DEBUG Already up to date. 2024-12-20 00:43:15,441 [ scc.git] DEBUG Calling 'git fetch origin pull/423/head' 2024-12-20 00:43:15,751 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:43:15,751 [ scc.git] DEBUG * branch refs/pull/423/head -> FETCH_HEAD 2024-12-20 00:43:15,757 [ scc.git] DEBUG Calling 'git fetch origin pull/424/head' 2024-12-20 00:43:16,099 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:43:16,099 [ scc.git] DEBUG * branch refs/pull/424/head -> FETCH_HEAD 2024-12-20 00:43:16,106 [ scc.git] DEBUG Calling 'git fetch origin pull/425/head' 2024-12-20 00:43:16,426 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:43:16,426 [ scc.git] DEBUG * branch refs/pull/425/head -> FETCH_HEAD 2024-12-20 00:43:16,435 [ scc.git] DEBUG Calling 'git fetch origin pull/426/head' 2024-12-20 00:43:16,748 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:43:16,749 [ scc.git] DEBUG * branch refs/pull/426/head -> FETCH_HEAD 2024-12-20 00:43:16,756 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-12-20 00:43:17,051 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:43:17,052 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-12-20 00:43:17,058 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:43:17,058 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:43:17,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:17,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f701c253bf23a0caa19ecd653bcdabe4f2614657' 2024-12-20 00:43:17,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:17,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 423 (Bump omero-figure from `1dfb138` to `fb316a7`) f701c253bf23a0caa19ecd653bcdabe4f2614657' 2024-12-20 00:43:17,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:43:17,093 [ scc.git] DEBUG omero-figure | 2 +- 2024-12-20 00:43:17,093 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-20 00:43:17,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:17,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc700434e1a3d80b4fce1f82b06722bd85253fe8' 2024-12-20 00:43:17,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:17,242 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 424 (Bump omero-signup from `c8610db` to `be76813`) bc700434e1a3d80b4fce1f82b06722bd85253fe8' 2024-12-20 00:43:17,278 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:43:17,281 [ scc.git] DEBUG omero-signup | 2 +- 2024-12-20 00:43:17,281 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-20 00:43:17,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:17,660 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89464b9b45fec581e2cf7f69dd60b03e470e1623' 2024-12-20 00:43:17,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:17,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 425 (Bump omero-rois from `5c752d5` to `7c7ed9a`) 89464b9b45fec581e2cf7f69dd60b03e470e1623' 2024-12-20 00:43:17,691 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:43:17,693 [ scc.git] DEBUG omero-rois | 2 +- 2024-12-20 00:43:17,693 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-20 00:43:18,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:18,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85b8dcd680249c07d39e51712b599176cd14a550' 2024-12-20 00:43:18,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:18,139 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 426 (Bump omero-prometheus-tools from `18bccb6` to `eb47378`) 85b8dcd680249c07d39e51712b599176cd14a550' 2024-12-20 00:43:18,160 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:43:18,163 [ scc.git] DEBUG omero-prometheus-tools | 2 +- 2024-12-20 00:43:18,163 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-20 00:43:18,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:18,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fe9ff35e7466af0c1f1e63efa37fa94172c3ba41' 2024-12-20 00:43:18,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:18,511 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 427 (Bump omero-web-zarr from `67bb245` to `8f3c313`) fe9ff35e7466af0c1f1e63efa37fa94172c3ba41' 2024-12-20 00:43:18,528 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:43:18,530 [ scc.git] DEBUG omero-web-zarr | 2 +- 2024-12-20 00:43:18,530 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-20 00:43:18,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:18,894 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:43:19,108 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228' 2024-12-20 00:43:19,135 [ scc.git] DEBUG Submodule path 'omero-prometheus-tools': checked out 'eb4737837b6d5fe6e807add66c8c43027166deac' 2024-12-20 00:43:19,193 [ scc.git] DEBUG Submodule path 'omero-rois': checked out '7c7ed9a6c5fa78010e99b97373c551576825fd44' 2024-12-20 00:43:19,254 [ scc.git] DEBUG Submodule path 'omero-signup': checked out 'be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-20 00:43:19,396 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-20 00:43:19,397 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:43:19,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:43:19,401 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:43:21,383 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd4400c3ee0> has no local changes 2024-12-20 00:43:21,384 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:43:21,460 [ scc.git] DEBUG [detached HEAD 7dd4910] merge master -Dorg -Snone 2024-12-20 00:43:21,460 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-20 00:43:21,460 [ scc.merge] INFO Already up to date. 2024-12-20 00:43:21,460 [ scc.merge] INFO 2024-12-20 00:43:21,460 [ scc.merge] INFO Merged PRs: 2024-12-20 00:43:21,460 [ scc.merge] INFO - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' 2024-12-20 00:43:21,460 [ scc.merge] INFO - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' 2024-12-20 00:43:21,460 [ scc.merge] INFO - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' 2024-12-20 00:43:21,460 [ scc.merge] INFO - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' 2024-12-20 00:43:21,460 [ scc.merge] INFO - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' 2024-12-20 00:43:21,460 [ scc.merge] INFO 2024-12-20 00:43:21,460 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-20 00:43:21,460 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-rois 7c7ed9a..bdfeb5e master -> origin/master Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-20 00:43:29,819 [ scc.config] DEBUG Found github.token 2024-12-20 00:43:29,822 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-20 00:43:29,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:30,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:43:30,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-20 00:43:30,760 [ scc.gh] DEBUG 4473 remaining from 5000 (Reset at 01:12 2024-12-20 00:43:30,761 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:30,765 [ scc.git] DEBUG Check current status 2024-12-20 00:43:30,766 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:30,769 [ scc.git] DEBUG 7dd4910 merge master -Dorg -Snone 2024-12-20 00:43:30,769 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:30,817 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-20 00:43:30,820 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-20 00:43:30,823 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-20 00:43:30,826 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-20 00:43:30,830 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-20 00:43:30,832 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-20 00:43:30,836 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-20 00:43:30,839 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-20 00:43:30,842 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-20 00:43:30,845 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-20 00:43:30,848 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-20 00:43:30,900 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-20 00:43:30,904 [ scc.git] DEBUG +bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-20 00:43:30,907 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-20 00:43:30,910 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-20 00:43:30,913 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-20 00:43:30,915 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-20 00:43:30,921 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-20 00:43:30,924 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-20 00:43:30,927 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-20 00:43:30,929 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-20 00:43:30,933 [ scc.git] DEBUG +4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-20 00:43:30,937 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:30,937 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-20 00:43:30,939 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-20 00:43:31,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-20 00:43:31,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:32,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:32,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:32,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:32,960 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:33,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-20 00:43:33,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:33,037 [ scc.git] DEBUG Check current status 2024-12-20 00:43:33,037 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:33,041 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-20 00:43:33,041 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:33,082 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:33,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-20 00:43:33,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:34,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:34,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:35,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:35,073 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:35,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:35,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-20 00:43:35,115 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:35,119 [ scc.git] DEBUG Check current status 2024-12-20 00:43:35,119 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:35,123 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-20 00:43:35,124 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:35,166 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:35,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-20 00:43:36,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:36,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:36,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:37,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:37,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:37,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:37,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-20 00:43:37,257 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:37,262 [ scc.git] DEBUG Check current status 2024-12-20 00:43:37,263 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:37,267 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-20 00:43:37,267 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:37,315 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:37,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-20 00:43:38,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:38,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:38,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:39,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:39,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:39,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:39,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-20 00:43:39,435 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:39,439 [ scc.git] DEBUG Check current status 2024-12-20 00:43:39,439 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:39,444 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-20 00:43:39,444 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:39,494 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:39,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-20 00:43:40,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:40,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:41,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:41,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:41,605 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:41,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:41,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-20 00:43:41,662 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:41,667 [ scc.git] DEBUG Check current status 2024-12-20 00:43:41,667 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:41,672 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2024-12-20 00:43:41,672 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:41,744 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:42,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-20 00:43:42,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:42,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:43,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:43,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:43,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:43,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:43,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-20 00:43:43,777 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:43,784 [ scc.git] DEBUG Check current status 2024-12-20 00:43:43,785 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:43,790 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-20 00:43:43,791 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:43,848 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:44,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-20 00:43:44,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:45,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:45,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:45,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:45,863 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:45,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:45,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-20 00:43:45,909 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:45,914 [ scc.git] DEBUG Check current status 2024-12-20 00:43:45,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:45,918 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-20 00:43:45,918 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:45,965 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:46,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-20 00:43:46,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:47,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:47,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:48,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:48,038 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:48,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:48,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-20 00:43:48,080 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:48,085 [ scc.git] DEBUG Check current status 2024-12-20 00:43:48,085 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:48,089 [ scc.git] DEBUG b4102d4 add dev 2024-12-20 00:43:48,089 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:48,138 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:48,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-20 00:43:48,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:49,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:49,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:50,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:50,225 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:50,266 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:50,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-20 00:43:50,267 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:50,271 [ scc.git] DEBUG Check current status 2024-12-20 00:43:50,271 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:50,275 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-20 00:43:50,275 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:50,318 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:50,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-20 00:43:51,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:51,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:51,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:52,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:52,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:52,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:52,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-20 00:43:52,457 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:52,463 [ scc.git] DEBUG Check current status 2024-12-20 00:43:52,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:52,468 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-20 00:43:52,469 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:52,520 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:52,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-20 00:43:53,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:53,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:54,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:54,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:54,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:54,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:54,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-20 00:43:54,682 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:54,688 [ scc.git] DEBUG Check current status 2024-12-20 00:43:54,688 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:54,695 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-20 00:43:54,695 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:54,745 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:55,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-20 00:43:55,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:55,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:56,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:56,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:56,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:56,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:56,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-20 00:43:56,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:56,846 [ scc.git] DEBUG Check current status 2024-12-20 00:43:56,847 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:56,851 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2024-12-20 00:43:56,852 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:56,893 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:57,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-20 00:43:57,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:43:58,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:43:58,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:43:58,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:43:58,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:43:58,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:43:58,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-20 00:43:58,993 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:43:58,999 [ scc.git] DEBUG Check current status 2024-12-20 00:43:58,999 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:43:59,003 [ scc.git] DEBUG bdfeb5e bump sphinx version 2024-12-20 00:43:59,004 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:43:59,047 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:43:59,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-20 00:43:59,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:00,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:00,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:01,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:01,140 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:01,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:01,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-20 00:44:01,185 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:01,192 [ scc.git] DEBUG Check current status 2024-12-20 00:44:01,192 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:01,198 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2024-12-20 00:44:01,199 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:01,244 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:01,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-20 00:44:02,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:02,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:02,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:03,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:03,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:03,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:03,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-20 00:44:03,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:03,416 [ scc.git] DEBUG Check current status 2024-12-20 00:44:03,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:03,421 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-20 00:44:03,421 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:03,464 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:03,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-20 00:44:03,809 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-20 00:44:04,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-20 00:44:04,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:04,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:05,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:05,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:05,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:05,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:05,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-20 00:44:05,819 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:05,825 [ scc.git] DEBUG Check current status 2024-12-20 00:44:05,825 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:05,832 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-20 00:44:05,833 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:05,881 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:06,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-20 00:44:06,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:07,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:07,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:07,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:07,983 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:08,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:08,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-20 00:44:08,028 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:08,034 [ scc.git] DEBUG Check current status 2024-12-20 00:44:08,034 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:08,039 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-20 00:44:08,039 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:08,088 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:08,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-20 00:44:08,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:09,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:09,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:10,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:10,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:10,232 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:10,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-20 00:44:10,233 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:10,239 [ scc.git] DEBUG Check current status 2024-12-20 00:44:10,239 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:10,244 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2024-12-20 00:44:10,245 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:10,293 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:10,294 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-20 00:44:10,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-20 00:44:11,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:11,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:11,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:12,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:12,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:12,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:12,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-20 00:44:12,458 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:12,465 [ scc.git] DEBUG Check current status 2024-12-20 00:44:12,465 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:12,471 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-20 00:44:12,472 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:12,522 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:12,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-20 00:44:12,814 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-20 00:44:13,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-20 00:44:13,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:13,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:14,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:14,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:14,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:14,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:14,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-20 00:44:14,854 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:14,860 [ scc.git] DEBUG Check current status 2024-12-20 00:44:14,861 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:14,867 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-20 00:44:14,867 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:14,918 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:15,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-20 00:44:15,211 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-20 00:44:15,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-20 00:44:15,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:16,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:17,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:17,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:17,123 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:17,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-20 00:44:17,124 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:17,130 [ scc.git] DEBUG Check current status 2024-12-20 00:44:17,131 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:17,137 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-20 00:44:17,137 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:17,185 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:17,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-20 00:44:18,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:18,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:18,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:19,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:19,270 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:19,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:19,313 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-20 00:44:19,313 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-20 00:44:19,319 [ scc.git] DEBUG Check current status 2024-12-20 00:44:19,319 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:19,370 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-20 00:44:19,371 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:19,419 [ scc.config] DEBUG Found remote.origin.url 2024-12-20 00:44:19,420 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-20 00:44:19,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-20 00:44:19,806 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-20 00:44:20,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-20 00:44:20,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-20 00:44:20,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-20 00:44:21,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:21,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-20 00:44:21,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:21,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:21,809 [ scc.git] DEBUG Resetting... 2024-12-20 00:44:21,810 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-20 00:44:21,822 [ scc.git] DEBUG HEAD is now at 7dd4910 merge master -Dorg -Snone 2024-12-20 00:44:21,823 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-20 00:44:21,907 [ scc.git] DEBUG Submodule path 'omero-rois': checked out '7c7ed9a6c5fa78010e99b97373c551576825fd44' 2024-12-20 00:44:21,945 [ scc.git] DEBUG Submodule path 'scripts': checked out '312afbed633613e1f728a1fe9eaac096e54318e0' 2024-12-20 00:44:21,949 [ scc.git] DEBUG Check current status 2024-12-20 00:44:21,949 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-20 00:44:21,956 [ scc.git] DEBUG 7dd4910 merge master -Dorg -Snone 2024-12-20 00:44:21,956 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-20 00:44:22,007 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-20 00:44:22,010 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-20 00:44:22,013 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-20 00:44:22,016 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-20 00:44:22,019 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-20 00:44:22,023 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-20 00:44:22,026 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-20 00:44:22,029 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-20 00:44:22,032 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-20 00:44:22,036 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-20 00:44:22,039 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-20 00:44:22,042 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-20 00:44:22,045 [ scc.git] DEBUG 7c7ed9a6c5fa78010e99b97373c551576825fd44 omero-rois (v0.2.0-68-g7c7ed9a) 2024-12-20 00:44:22,048 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-20 00:44:22,051 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-20 00:44:22,054 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-20 00:44:22,057 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-20 00:44:22,060 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-20 00:44:22,062 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-20 00:44:22,066 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-20 00:44:22,068 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-20 00:44:22,072 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-20 00:44:22,073 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-20 00:44:22,074 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-20 00:44:22,074 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-20 00:44:22,074 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-20 00:44:22,074 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-20 00:44:22,074 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-20 00:44:22,074 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:44:22,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-20 00:44:22,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/427 HTTP/1.1" 200 None 2024-12-20 00:44:22,852 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:44:23,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/fe9ff35e7466af0c1f1e63efa37fa94172c3ba41 HTTP/1.1" 200 None 2024-12-20 00:44:23,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/fe9ff35e7466af0c1f1e63efa37fa94172c3ba41/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:24,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/fe9ff35e7466af0c1f1e63efa37fa94172c3ba41 HTTP/1.1" 200 None 2024-12-20 00:44:24,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/fe9ff35e7466af0c1f1e63efa37fa94172c3ba41?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:24,740 [ scc.repo] DEBUG - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' 2024-12-20 00:44:25,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/426 HTTP/1.1" 200 None 2024-12-20 00:44:25,260 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:44:25,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/85b8dcd680249c07d39e51712b599176cd14a550 HTTP/1.1" 200 None 2024-12-20 00:44:26,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/85b8dcd680249c07d39e51712b599176cd14a550/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:26,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/85b8dcd680249c07d39e51712b599176cd14a550 HTTP/1.1" 200 None 2024-12-20 00:44:27,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/85b8dcd680249c07d39e51712b599176cd14a550?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:27,200 [ scc.repo] DEBUG - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' 2024-12-20 00:44:27,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/425 HTTP/1.1" 200 None 2024-12-20 00:44:27,658 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:44:28,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89464b9b45fec581e2cf7f69dd60b03e470e1623 HTTP/1.1" 200 None 2024-12-20 00:44:28,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89464b9b45fec581e2cf7f69dd60b03e470e1623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:29,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/89464b9b45fec581e2cf7f69dd60b03e470e1623 HTTP/1.1" 200 None 2024-12-20 00:44:29,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/89464b9b45fec581e2cf7f69dd60b03e470e1623?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:29,741 [ scc.repo] DEBUG - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' 2024-12-20 00:44:30,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/424 HTTP/1.1" 200 None 2024-12-20 00:44:30,244 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:44:30,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/bc700434e1a3d80b4fce1f82b06722bd85253fe8 HTTP/1.1" 200 None 2024-12-20 00:44:31,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/bc700434e1a3d80b4fce1f82b06722bd85253fe8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:31,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/bc700434e1a3d80b4fce1f82b06722bd85253fe8 HTTP/1.1" 200 None 2024-12-20 00:44:32,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/bc700434e1a3d80b4fce1f82b06722bd85253fe8?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:32,124 [ scc.repo] DEBUG - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' 2024-12-20 00:44:32,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/423 HTTP/1.1" 200 None 2024-12-20 00:44:32,592 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:44:33,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/f701c253bf23a0caa19ecd653bcdabe4f2614657 HTTP/1.1" 200 None 2024-12-20 00:44:33,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/f701c253bf23a0caa19ecd653bcdabe4f2614657/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:34,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/f701c253bf23a0caa19ecd653bcdabe4f2614657 HTTP/1.1" 200 None 2024-12-20 00:44:34,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/f701c253bf23a0caa19ecd653bcdabe4f2614657?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:34,699 [ scc.repo] DEBUG - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' 2024-12-20 00:44:34,699 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:44:34,699 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:34,699 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:34,705 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:44:34,710 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:44:34,710 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:44:34,717 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:44:34,724 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:34,725 [ scc.git] DEBUG Calling 'git fetch origin pull/423/head' 2024-12-20 00:44:35,058 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:44:35,058 [ scc.git] DEBUG * branch refs/pull/423/head -> FETCH_HEAD 2024-12-20 00:44:35,068 [ scc.git] DEBUG Calling 'git fetch origin pull/424/head' 2024-12-20 00:44:35,345 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:44:35,345 [ scc.git] DEBUG * branch refs/pull/424/head -> FETCH_HEAD 2024-12-20 00:44:35,352 [ scc.git] DEBUG Calling 'git fetch origin pull/425/head' 2024-12-20 00:44:35,647 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:44:35,648 [ scc.git] DEBUG * branch refs/pull/425/head -> FETCH_HEAD 2024-12-20 00:44:35,655 [ scc.git] DEBUG Calling 'git fetch origin pull/426/head' 2024-12-20 00:44:35,951 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:44:35,951 [ scc.git] DEBUG * branch refs/pull/426/head -> FETCH_HEAD 2024-12-20 00:44:35,957 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-12-20 00:44:36,240 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-20 00:44:36,240 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-12-20 00:44:36,247 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:44:36,247 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:36,247 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:36,253 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f701c253bf23a0caa19ecd653bcdabe4f2614657' 2024-12-20 00:44:36,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:36,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 423 (Bump omero-figure from `1dfb138` to `fb316a7`) f701c253bf23a0caa19ecd653bcdabe4f2614657' 2024-12-20 00:44:36,270 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:36,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:36,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc700434e1a3d80b4fce1f82b06722bd85253fe8' 2024-12-20 00:44:36,418 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:36,423 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 424 (Bump omero-signup from `c8610db` to `be76813`) bc700434e1a3d80b4fce1f82b06722bd85253fe8' 2024-12-20 00:44:36,428 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:36,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:36,800 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...89464b9b45fec581e2cf7f69dd60b03e470e1623' 2024-12-20 00:44:36,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:36,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 425 (Bump omero-rois from `5c752d5` to `7c7ed9a`) 89464b9b45fec581e2cf7f69dd60b03e470e1623' 2024-12-20 00:44:36,818 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:37,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:37,194 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85b8dcd680249c07d39e51712b599176cd14a550' 2024-12-20 00:44:37,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:37,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 426 (Bump omero-prometheus-tools from `18bccb6` to `eb47378`) 85b8dcd680249c07d39e51712b599176cd14a550' 2024-12-20 00:44:37,214 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:37,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:37,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fe9ff35e7466af0c1f1e63efa37fa94172c3ba41' 2024-12-20 00:44:37,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:37,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Bump omero-web-zarr from `67bb245` to `8f3c313`) fe9ff35e7466af0c1f1e63efa37fa94172c3ba41' 2024-12-20 00:44:37,614 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:37,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:37,986 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:44:38,038 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:38,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:38,046 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:44:38,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-20 00:44:38,395 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:44:38,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-20 00:44:38,395 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:38,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:38,401 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:44:38,406 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:44:38,407 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:44:38,413 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:44:38,420 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:38,420 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:44:38,420 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:38,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:38,425 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:44:38,468 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:38,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:38,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:38,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:44:38,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366fc988b0> has no local changes 2024-12-20 00:44:38,524 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:44:38,533 [ scc.git] DEBUG [detached HEAD 26e6e9f] merge master -Dorg -Ssuccess-only 2024-12-20 00:44:38,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:38,534 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:44:38,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-20 00:44:39,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-20 00:44:39,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-20 00:44:39,836 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:44:39,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-20 00:44:39,837 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:39,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:39,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:44:39,850 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:44:39,851 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:44:39,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:44:39,867 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:39,867 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:44:39,868 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:39,868 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:39,874 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:44:39,913 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:39,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:39,919 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:39,962 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:44:39,968 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366fca23d0> has no local changes 2024-12-20 00:44:39,968 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:44:39,978 [ scc.git] DEBUG [detached HEAD 37c709a] merge master -Dorg -Ssuccess-only 2024-12-20 00:44:39,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:39,978 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:44:40,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-20 00:44:40,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-20 00:44:41,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-20 00:44:41,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-20 00:44:42,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:42,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:44:43,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-20 00:44:43,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:43,820 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-20 00:44:44,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-20 00:44:44,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-20 00:44:44,760 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:44:44,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-20 00:44:44,760 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:44,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:44,766 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:44:44,771 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:44:44,772 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:44:44,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:44:44,782 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:44,782 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-20 00:44:45,684 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-20 00:44:45,684 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-20 00:44:45,689 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:44:45,689 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:45,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:45,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-20 00:44:45,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:45,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-20 00:44:45,758 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:44:45,760 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-20 00:44:45,760 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-20 00:44:45,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:45,908 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:44:45,950 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:45,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:45,956 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:44:45,998 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:44:46,006 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366ebb5f40> has no local changes 2024-12-20 00:44:46,006 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:44:46,015 [ scc.git] DEBUG [detached HEAD d6ef9b0] merge master -Dorg -Ssuccess-only 2024-12-20 00:44:46,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:44:46,016 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:44:46,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-20 00:44:46,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-20 00:44:47,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-20 00:44:47,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-20 00:44:48,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-20 00:44:48,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:49,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:44:49,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-20 00:44:50,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:50,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-20 00:44:51,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-20 00:44:51,288 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-20 00:44:51,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-20 00:44:52,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-20 00:44:52,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-20 00:44:53,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-20 00:44:53,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:54,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-20 00:44:54,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:54,709 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-20 00:44:55,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-20 00:44:55,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-20 00:44:56,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-20 00:44:56,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:44:57,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-20 00:44:57,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:44:57,523 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-20 00:44:57,523 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:44:57,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-20 00:44:57,524 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:57,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:57,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:44:57,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:44:57,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:44:57,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:44:57,544 [ scc.git] DEBUG Already up to date. 2024-12-20 00:44:57,544 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-20 00:44:58,158 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-20 00:44:58,158 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-20 00:44:58,163 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-20 00:44:58,631 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-20 00:44:58,632 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-20 00:44:58,636 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-20 00:44:59,082 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-20 00:44:59,082 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-20 00:44:59,087 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:44:59,087 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:44:59,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:59,094 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-20 00:44:59,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:59,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-20 00:44:59,253 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-20 00:44:59,253 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-20 00:44:59,253 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-20 00:44:59,254 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:44:59,254 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:44:59,260 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-20 00:44:59,268 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-20 00:44:59,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:59,401 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-20 00:44:59,409 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-20 00:44:59,416 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-20 00:44:59,421 [ scc.config] DEBUG Found github.token 2024-12-20 00:44:59,421 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-20 00:44:59,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-20 00:44:59,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:59,433 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-20 00:44:59,478 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-20 00:44:59,478 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-20 00:44:59,478 [ scc.git] DEBUG Auto-merging setup.py 2024-12-20 00:44:59,478 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-20 00:44:59,478 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-20 00:44:59,478 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-20 00:44:59,479 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-20 00:44:59,479 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:44:59,479 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:44:59,487 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-20 00:44:59,495 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-20 00:44:59,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:44:59,785 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-20 00:44:59,792 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-20 00:44:59,800 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-20 00:44:59,804 [ scc.config] DEBUG Found github.token 2024-12-20 00:44:59,805 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-20 00:44:59,805 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-20 00:44:59,811 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:44:59,816 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-20 00:44:59,829 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-20 00:44:59,830 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-20 00:44:59,830 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:44:59,833 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-20 00:44:59,834 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-20 00:44:59,834 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-20 00:44:59,834 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-20 00:44:59,834 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-20 00:44:59,834 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-20 00:45:00,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:00,207 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:00,251 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:00,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:00,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:00,305 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:00,312 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3670946040> has no local changes 2024-12-20 00:45:00,313 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:00,322 [ scc.git] DEBUG [detached HEAD df9936f] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:00,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:00,323 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:00,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-20 00:45:01,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-20 00:45:01,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-20 00:45:02,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-20 00:45:02,268 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:45:02,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-20 00:45:02,268 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:02,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:02,274 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:45:02,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:45:02,280 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:45:02,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:45:02,291 [ scc.git] DEBUG Already up to date. 2024-12-20 00:45:02,292 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:45:02,292 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:02,292 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:02,297 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:02,339 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:02,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:02,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:02,383 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:02,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366eb94b20> has no local changes 2024-12-20 00:45:02,391 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:02,401 [ scc.git] DEBUG [detached HEAD ecf0708a] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:02,401 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:02,401 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:02,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-20 00:45:03,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-20 00:45:03,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-20 00:45:04,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-20 00:45:04,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:05,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-20 00:45:05,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:05,578 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-20 00:45:05,578 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:45:05,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-20 00:45:05,578 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:05,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:05,584 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:45:05,589 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:45:05,589 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:45:05,595 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:45:05,602 [ scc.git] DEBUG Already up to date. 2024-12-20 00:45:05,602 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-20 00:45:05,956 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-20 00:45:05,957 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-20 00:45:05,961 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:45:05,961 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:05,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:05,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-20 00:45:05,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:05,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-20 00:45:06,105 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-20 00:45:06,106 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:06,109 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-20 00:45:06,109 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-20 00:45:06,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:06,248 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:06,288 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:06,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:06,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:06,332 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:06,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366ebd8e50> has no local changes 2024-12-20 00:45:06,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:06,349 [ scc.git] DEBUG [detached HEAD c6743b6] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:06,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:06,349 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-20 00:45:07,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-20 00:45:07,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-20 00:45:07,941 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:08,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-20 00:45:09,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:09,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:10,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-20 00:45:10,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:10,465 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-20 00:45:10,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-20 00:45:10,937 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:11,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-20 00:45:12,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:12,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:13,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-20 00:45:13,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:13,463 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-20 00:45:13,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-20 00:45:13,943 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:14,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-20 00:45:15,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:15,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:16,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-20 00:45:16,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:16,596 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-20 00:45:17,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-20 00:45:17,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-20 00:45:17,496 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:18,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-20 00:45:18,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:19,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:19,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-20 00:45:20,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:20,095 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-20 00:45:20,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-20 00:45:20,583 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:21,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-20 00:45:21,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:22,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:22,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-20 00:45:23,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:23,225 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-20 00:45:23,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-20 00:45:23,745 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:24,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-20 00:45:24,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:25,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:25,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-20 00:45:26,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:26,338 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-20 00:45:26,338 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:45:26,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-20 00:45:26,338 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:26,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:26,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:45:26,350 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:45:26,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:45:26,356 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:45:26,361 [ scc.git] DEBUG Already up to date. 2024-12-20 00:45:26,361 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-20 00:45:26,683 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:26,683 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-20 00:45:26,688 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-20 00:45:26,993 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:26,993 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-20 00:45:26,998 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-20 00:45:27,293 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:27,293 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-20 00:45:27,297 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-20 00:45:27,589 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:27,589 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-20 00:45:27,593 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-20 00:45:27,882 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:27,883 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-20 00:45:27,888 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-20 00:45:28,177 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-20 00:45:28,178 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-20 00:45:28,182 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:45:28,182 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:28,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:28,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-20 00:45:28,208 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:28,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-20 00:45:28,294 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:28,300 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-20 00:45:28,300 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-20 00:45:28,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:28,444 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-20 00:45:28,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:28,490 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-20 00:45:28,637 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-20 00:45:28,638 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:28,643 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-20 00:45:28,643 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-20 00:45:28,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:28,836 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-20 00:45:28,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:28,856 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-20 00:45:28,952 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-20 00:45:28,952 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-20 00:45:28,952 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:45:28,953 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:45:28,960 [ scc.git] DEBUG Calling 'git reset --hard 6dc21fe83354820a5dafe4e91bc9b7803b020b88' 2024-12-20 00:45:28,968 [ scc.git] DEBUG HEAD is now at 6dc21fe merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-20 00:45:29,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:29,221 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-20 00:45:29,227 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-20 00:45:29,233 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-20 00:45:29,239 [ scc.config] DEBUG Found github.token 2024-12-20 00:45:29,240 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-20 00:45:29,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-20 00:45:29,303 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:29,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-20 00:45:29,451 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-20 00:45:29,452 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:29,457 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-20 00:45:29,457 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-20 00:45:29,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:29,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-20 00:45:29,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:29,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-20 00:45:29,757 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-20 00:45:29,758 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:29,763 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-20 00:45:29,763 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-20 00:45:30,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:30,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-20 00:45:30,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:30,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-20 00:45:30,155 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-20 00:45:30,155 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-20 00:45:30,155 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:45:30,155 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:45:30,162 [ scc.git] DEBUG Calling 'git reset --hard a5c9205bd1792414628e22baf8fc740439707b11' 2024-12-20 00:45:30,170 [ scc.git] DEBUG HEAD is now at a5c9205 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-20 00:45:30,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:30,402 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-20 00:45:30,408 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-20 00:45:30,414 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-20 00:45:30,419 [ scc.config] DEBUG Found github.token 2024-12-20 00:45:30,420 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-20 00:45:31,347 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-20 00:45:31,348 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:31,391 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:31,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:31,397 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:31,437 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:31,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366ebdbf40> has no local changes 2024-12-20 00:45:31,446 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:31,455 [ scc.git] DEBUG [detached HEAD 8273076] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:31,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:31,455 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:31,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-20 00:45:32,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-20 00:45:32,412 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-20 00:45:33,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-20 00:45:33,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:34,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:34,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-20 00:45:34,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:34,855 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-20 00:45:35,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-20 00:45:35,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-20 00:45:36,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-20 00:45:36,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-20 00:45:37,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-20 00:45:37,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:38,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:38,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-20 00:45:39,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:39,180 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-20 00:45:39,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-20 00:45:40,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-20 00:45:40,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-20 00:45:41,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:41,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:45:42,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-20 00:45:42,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:42,624 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-20 00:45:43,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-20 00:45:43,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-20 00:45:44,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-20 00:45:44,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:45,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-20 00:45:45,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:45,458 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-20 00:45:45,458 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:45:45,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-20 00:45:45,459 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:45,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:45,465 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:45:45,471 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:45:45,471 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:45:45,477 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:45:45,484 [ scc.git] DEBUG Already up to date. 2024-12-20 00:45:45,484 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-20 00:45:47,212 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-20 00:45:47,212 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-20 00:45:47,217 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-20 00:45:48,264 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-20 00:45:48,264 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-20 00:45:48,269 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-20 00:45:48,619 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-20 00:45:48,619 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-20 00:45:48,623 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-20 00:45:48,915 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-20 00:45:48,915 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-20 00:45:48,920 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:45:48,920 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:48,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:48,926 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-20 00:45:48,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:48,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-20 00:45:48,976 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-20 00:45:48,977 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:48,981 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-20 00:45:48,981 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-20 00:45:48,981 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-20 00:45:49,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:49,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-20 00:45:49,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:49,139 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-20 00:45:49,338 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-20 00:45:49,338 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-20 00:45:49,338 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-20 00:45:49,339 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-20 00:45:49,339 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:49,343 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-20 00:45:49,344 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-20 00:45:49,344 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-20 00:45:49,344 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-20 00:45:49,344 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-20 00:45:49,344 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-20 00:45:49,344 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-20 00:45:49,344 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-20 00:45:49,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:49,516 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-20 00:45:49,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:49,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-20 00:45:49,601 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-20 00:45:49,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:49,605 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-20 00:45:49,605 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-20 00:45:49,605 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-20 00:45:49,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:49,900 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-20 00:45:49,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:49,954 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-20 00:45:50,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:50,078 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-20 00:45:50,078 [ scc.git] DEBUG package.json | 2 +- 2024-12-20 00:45:50,078 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-20 00:45:50,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:50,307 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:50,349 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:50,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:50,356 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:50,399 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:50,409 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c337610> has no local changes 2024-12-20 00:45:50,409 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:50,423 [ scc.git] DEBUG [detached HEAD 14fc763] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:50,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:50,424 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:50,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-20 00:45:51,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-20 00:45:51,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-20 00:45:52,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-20 00:45:52,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:53,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-20 00:45:53,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:53,710 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-20 00:45:53,711 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:45:53,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-20 00:45:53,711 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:53,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:53,717 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:45:53,721 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:45:53,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:45:53,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:45:53,732 [ scc.git] DEBUG Already up to date. 2024-12-20 00:45:53,733 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-20 00:45:54,683 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-20 00:45:54,684 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-20 00:45:54,689 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:45:54,689 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:54,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:54,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-20 00:45:54,703 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:54,710 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-20 00:45:54,722 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:45:54,726 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-20 00:45:54,726 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-20 00:45:54,726 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-20 00:45:54,726 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-20 00:45:54,726 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-20 00:45:54,726 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-20 00:45:54,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:45:54,873 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:45:54,918 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:45:54,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:45:54,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:45:54,967 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:45:54,974 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c349bb0> has no local changes 2024-12-20 00:45:54,974 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:45:54,983 [ scc.git] DEBUG [detached HEAD 9b144f8] merge master -Dorg -Ssuccess-only 2024-12-20 00:45:54,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:45:54,983 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:45:55,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-20 00:45:55,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-20 00:45:56,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-20 00:45:56,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-20 00:45:57,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:45:57,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-20 00:45:58,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:45:58,270 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-20 00:45:58,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-20 00:45:59,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-20 00:45:59,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-20 00:46:00,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:00,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-20 00:46:01,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:01,128 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-20 00:46:01,128 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:01,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-20 00:46:01,128 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:01,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:01,135 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:01,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:01,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:01,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:01,159 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:01,159 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-20 00:46:02,216 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-20 00:46:02,216 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-20 00:46:02,221 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-20 00:46:02,971 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-20 00:46:02,971 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-20 00:46:02,977 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:02,977 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:02,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:02,983 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-20 00:46:02,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:02,997 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-20 00:46:03,098 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-20 00:46:03,098 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-20 00:46:03,098 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-20 00:46:03,098 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-20 00:46:03,098 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:03,098 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:03,105 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-20 00:46:03,113 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-20 00:46:03,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:03,252 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-20 00:46:03,260 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-20 00:46:03,318 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-12-20 00:46:03,324 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:03,324 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-20 00:46:03,324 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-20 00:46:03,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:03,336 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-20 00:46:03,395 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-20 00:46:03,395 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-20 00:46:03,395 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-20 00:46:03,395 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:03,395 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:03,402 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-20 00:46:03,411 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-20 00:46:03,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:03,643 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-20 00:46:03,651 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-20 00:46:03,657 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-20 00:46:03,663 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:03,664 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-20 00:46:03,664 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:03,704 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:03,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:03,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:03,755 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:03,764 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2f1880> has no local changes 2024-12-20 00:46:03,764 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:03,777 [ scc.git] DEBUG [detached HEAD d62b43f] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:03,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:03,777 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:04,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-20 00:46:04,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-20 00:46:05,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-20 00:46:05,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-20 00:46:06,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-20 00:46:06,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-20 00:46:07,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-20 00:46:07,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-20 00:46:07,588 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:07,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-20 00:46:07,589 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:07,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:07,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:07,601 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:07,601 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:07,607 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:07,613 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:07,613 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:07,613 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:07,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:07,618 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:07,657 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:07,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:07,663 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:07,701 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:07,707 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2f1670> has no local changes 2024-12-20 00:46:07,707 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:07,715 [ scc.git] DEBUG [detached HEAD 72bfbbc] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:07,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:07,716 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:08,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2024-12-20 00:46:08,016 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:08,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-20 00:46:08,017 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:08,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:08,022 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:08,027 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:08,027 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:08,032 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:08,037 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:08,038 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:08,038 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:08,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:08,042 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:08,081 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:08,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:08,086 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:08,123 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:08,129 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c351df0> has no local changes 2024-12-20 00:46:08,130 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:08,138 [ scc.git] DEBUG [detached HEAD 477f6bb] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:08,139 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:08,139 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:08,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-20 00:46:08,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-20 00:46:09,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-20 00:46:09,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-20 00:46:10,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:10,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-20 00:46:11,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:11,278 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-20 00:46:11,278 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:11,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-20 00:46:11,278 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:11,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:11,284 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:11,289 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:11,289 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:11,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:11,305 [ scc.git] DEBUG Updating 7c7ed9a..bdfeb5e 2024-12-20 00:46:11,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/31 HTTP/1.1" 200 None 2024-12-20 00:46:12,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/30 HTTP/1.1" 200 None 2024-12-20 00:46:12,430 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-20 00:46:12,928 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-20 00:46:12,929 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-20 00:46:12,934 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:12,934 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:12,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:12,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-20 00:46:12,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:12,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-20 00:46:12,966 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-20 00:46:12,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:46:12,969 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-20 00:46:12,969 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-20 00:46:13,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:13,104 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:13,143 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:13,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:13,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:13,189 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:13,197 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c31d730> has no local changes 2024-12-20 00:46:13,197 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Updating 7c7ed9a..bdfeb5e Previously merged: - PR 31 jburel 'Install sphinx' - PR 30 jburel 'Add readthedoc config file' Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:13,208 [ scc.git] DEBUG [detached HEAD 3838134] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:13,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:13,209 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:13,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-20 00:46:14,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-20 00:46:14,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-20 00:46:15,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-20 00:46:15,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:16,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-20 00:46:16,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:16,548 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-20 00:46:16,548 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:16,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-20 00:46:16,548 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:16,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:16,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:16,558 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:16,558 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:16,564 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:16,569 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:16,569 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-20 00:46:16,953 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-20 00:46:16,953 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-20 00:46:16,957 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:16,957 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:16,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:16,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-20 00:46:16,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:16,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-20 00:46:17,013 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG Auto-merging setup.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-20 00:46:17,013 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:17,014 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:17,020 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-20 00:46:17,026 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2024-12-20 00:46:17,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:17,164 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-20 00:46:17,173 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-20 00:46:17,180 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2024-12-20 00:46:17,185 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:17,185 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-20 00:46:17,185 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:17,223 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:17,223 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:17,229 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:17,266 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:17,273 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c31d610> has no local changes 2024-12-20 00:46:17,273 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:17,282 [ scc.git] DEBUG [detached HEAD cd2f2b1] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:17,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:17,282 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:17,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-20 00:46:18,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2024-12-20 00:46:18,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2024-12-20 00:46:19,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2024-12-20 00:46:19,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:20,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:46:20,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2024-12-20 00:46:21,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2024-12-20 00:46:21,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-20 00:46:22,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-20 00:46:22,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-20 00:46:23,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:23,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-20 00:46:23,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:23,953 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-20 00:46:23,953 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:23,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-20 00:46:23,953 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:23,953 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:23,959 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:23,964 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:23,964 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:23,970 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:23,976 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:23,976 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-20 00:46:24,358 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-20 00:46:24,359 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-20 00:46:24,363 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:24,364 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:24,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:24,369 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-20 00:46:24,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:24,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-20 00:46:24,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-20 00:46:24,414 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-20 00:46:24,417 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-20 00:46:24,418 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-20 00:46:24,418 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-20 00:46:24,418 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-20 00:46:24,418 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-20 00:46:24,418 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-20 00:46:24,418 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-20 00:46:24,419 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-20 00:46:24,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:24,694 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:24,738 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:24,738 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:24,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:24,784 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:24,791 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2f2c70> has no local changes 2024-12-20 00:46:24,791 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:24,801 [ scc.git] DEBUG [detached HEAD f8b9c58] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:24,801 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:24,801 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:25,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-20 00:46:25,134 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:25,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-20 00:46:25,134 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:25,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:25,140 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:25,145 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:25,145 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:25,150 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:25,157 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:25,157 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:25,157 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:25,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:25,163 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:25,203 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:25,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:25,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:25,251 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:25,258 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c340f40> has no local changes 2024-12-20 00:46:25,258 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:25,266 [ scc.git] DEBUG [detached HEAD 64fc09f] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:25,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:25,267 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:25,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-20 00:46:26,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-20 00:46:26,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2024-12-20 00:46:27,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-20 00:46:27,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:28,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:46:28,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-20 00:46:28,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:28,988 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-20 00:46:28,988 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:28,988 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-20 00:46:28,989 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:28,989 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:28,996 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:29,002 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:29,002 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:29,007 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:29,013 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:29,013 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-20 00:46:29,613 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-20 00:46:29,613 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-20 00:46:29,618 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:29,618 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:29,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:29,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-20 00:46:29,631 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:29,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-20 00:46:29,713 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:46:29,716 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-20 00:46:29,716 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-20 00:46:29,716 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-20 00:46:29,716 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-20 00:46:29,716 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-20 00:46:29,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:29,852 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:29,896 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:29,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:29,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:29,947 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:29,954 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2d6f70> has no local changes 2024-12-20 00:46:29,954 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:29,962 [ scc.git] DEBUG [detached HEAD 3fc79b6] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:29,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:29,963 [ scc.git] INFO Overriding base-branch from master to main 2024-12-20 00:46:29,963 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-20 00:46:30,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-20 00:46:31,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-20 00:46:31,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-20 00:46:32,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:32,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:46:33,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-20 00:46:33,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-20 00:46:34,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-20 00:46:34,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-20 00:46:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:35,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-20 00:46:36,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:36,045 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-20 00:46:36,045 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:36,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-20 00:46:36,045 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:36,045 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:36,051 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-20 00:46:36,056 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:36,056 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-20 00:46:36,061 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-20 00:46:36,067 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:36,067 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-20 00:46:36,531 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-20 00:46:36,531 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-20 00:46:36,536 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:36,536 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:36,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:36,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-20 00:46:36,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:36,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-20 00:46:36,727 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-20 00:46:36,727 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-20 00:46:36,727 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:36,728 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:36,734 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-20 00:46:36,741 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2024-12-20 00:46:36,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:36,906 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-20 00:46:36,912 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-20 00:46:36,917 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-20 00:46:36,922 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:36,922 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-20 00:46:36,922 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:36,960 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:36,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:36,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:37,002 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:37,008 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c290af0> has no local changes 2024-12-20 00:46:37,009 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:37,016 [ scc.git] DEBUG [detached HEAD 5d8e0da] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:37,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:37,017 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:37,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-20 00:46:37,319 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:37,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-20 00:46:37,319 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:37,329 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:37,329 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:37,335 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:37,342 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:37,342 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:37,342 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,348 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:37,388 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:37,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:37,442 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c290a30> has no local changes 2024-12-20 00:46:37,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:37,451 [ scc.git] DEBUG [detached HEAD b9c7d18] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:37,452 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:37,452 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:37,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-20 00:46:37,736 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:37,736 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-20 00:46:37,736 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,742 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:37,747 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:37,747 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:37,752 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:37,757 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:37,758 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:37,758 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,762 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:37,800 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:37,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:37,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:37,843 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:37,851 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2368b0> has no local changes 2024-12-20 00:46:37,851 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:37,859 [ scc.git] DEBUG [detached HEAD 5f8da58] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:37,860 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:37,860 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:38,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-20 00:46:38,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-20 00:46:39,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-20 00:46:39,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-20 00:46:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:40,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-20 00:46:41,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:41,025 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-20 00:46:41,025 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:41,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-20 00:46:41,026 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:41,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:41,032 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-20 00:46:41,038 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:41,038 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-20 00:46:41,043 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-20 00:46:41,049 [ scc.git] DEBUG Already up to date. 2024-12-20 00:46:41,050 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-20 00:46:41,370 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-20 00:46:41,371 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-20 00:46:41,376 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:41,376 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:41,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:41,381 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-20 00:46:41,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:41,391 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-20 00:46:41,510 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-20 00:46:41,510 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-20 00:46:41,511 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:41,511 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:41,518 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-20 00:46:41,525 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-20 00:46:41,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:41,670 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-20 00:46:41,676 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-20 00:46:41,682 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-20 00:46:41,687 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:41,687 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-20 00:46:41,688 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:41,730 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:41,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:41,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:41,779 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:41,787 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2365b0> has no local changes 2024-12-20 00:46:41,787 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:41,797 [ scc.git] DEBUG [detached HEAD 6fc49da] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:41,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:41,798 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-20 00:46:41,798 [ scc.repo] DEBUG ## PRs found: 2024-12-20 00:46:42,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-20 00:46:42,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-20 00:46:43,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-20 00:46:43,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-20 00:46:43,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:44,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-20 00:46:44,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-20 00:46:45,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:45,280 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-20 00:46:45,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-20 00:46:46,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-20 00:46:46,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-20 00:46:47,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-20 00:46:47,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-20 00:46:47,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-20 00:46:47,956 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-20 00:46:48,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-20 00:46:49,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-20 00:46:49,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-20 00:46:50,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-20 00:46:50,043 [ scc.repo] DEBUG ## Branches found: 2024-12-20 00:46:50,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-20 00:46:50,043 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:50,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:50,053 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-20 00:46:50,061 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-20 00:46:50,061 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-20 00:46:50,147 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-20 00:46:50,380 [ scc.git] DEBUG Updating 312afbe..4b4c755 2024-12-20 00:46:50,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/216 HTTP/1.1" 200 None 2024-12-20 00:46:50,865 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-20 00:46:51,294 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-20 00:46:51,294 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-20 00:46:51,299 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-20 00:46:51,884 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-20 00:46:51,885 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-20 00:46:51,889 [ scc.git] DEBUG ## Unique users: [] 2024-12-20 00:46:51,890 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:51,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:51,897 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-20 00:46:51,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:51,912 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-20 00:46:52,025 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2024-12-20 00:46:52,025 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-20 00:46:52,026 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-20 00:46:52,034 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-20 00:46:52,041 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-20 00:46:52,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:52,174 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-20 00:46:52,184 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-20 00:46:52,191 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#284](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-20 00:46:52,195 [ scc.config] DEBUG Found github.token 2024-12-20 00:46:52,196 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-20 00:46:52,196 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-20 00:46:52,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:52,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-20 00:46:52,229 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-20 00:46:52,233 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-20 00:46:52,233 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-20 00:46:52,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:52,566 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-20 00:46:52,613 [ scc.git] DEBUG Get sha1 of %s 2024-12-20 00:46:52,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-20 00:46:52,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:52,669 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:46:52,677 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f366c2aff10> has no local changes 2024-12-20 00:46:52,678 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 312afbe..4b4c755 Previously merged: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:46:52,687 [ scc.git] DEBUG [detached HEAD 6f1dea5] merge master -Dorg -Ssuccess-only 2024-12-20 00:46:52,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:46:52,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-20 00:46:52,769 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-20 00:46:52,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:52,967 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-20 00:46:52,972 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-20 00:46:53,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:53,389 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-20 00:46:53,394 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-20 00:46:53,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:53,789 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-20 00:46:53,794 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-20 00:46:54,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:54,197 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-20 00:46:54,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:54,574 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-20 00:46:54,579 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-20 00:46:54,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:54,964 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-20 00:46:54,968 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-20 00:46:55,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:55,358 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-20 00:46:55,362 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-20 00:46:55,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:55,745 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-20 00:46:55,750 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-20 00:46:56,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:56,163 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-20 00:46:56,168 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-20 00:46:56,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:56,551 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-20 00:46:56,556 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-20 00:46:56,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:56,944 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-20 00:46:56,949 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-20 00:46:57,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:57,352 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-20 00:46:57,356 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-20 00:46:57,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:57,746 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-20 00:46:58,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:58,131 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-20 00:46:58,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:58,551 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-20 00:46:58,555 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-20 00:46:58,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:58,943 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-20 00:46:59,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:59,330 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-20 00:46:59,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:46:59,714 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-20 00:46:59,719 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-20 00:47:00,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:47:00,101 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-20 00:47:00,106 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-20 00:47:00,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:47:00,487 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-20 00:47:00,493 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-20 00:47:00,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:47:00,900 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-20 00:47:00,906 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-20 00:47:01,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-20 00:47:01,294 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-20 00:47:01,294 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-20 00:47:01,382 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3672003ee0> has local changes 2024-12-20 00:47:01,382 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Updating 7c7ed9a..bdfeb5e Previously merged: - PR 31 jburel 'Install sphinx' - PR 30 jburel 'Add readthedoc config file' Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Updating 312afbe..4b4c755 Previously merged: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#284 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/284/)' 2024-12-20 00:47:01,396 [ scc.git] DEBUG [detached HEAD 2077327] merge master -Dorg -Ssuccess-only 2024-12-20 00:47:01,397 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-20 00:47:01,397 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-20 00:47:01,397 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,397 [ scc.merge] INFO 2024-12-20 00:47:01,397 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,397 [ scc.merge] INFO - PR 423 dependabot[bot] 'Bump omero-figure from `1dfb138` to `fb316a7`' 2024-12-20 00:47:01,397 [ scc.merge] INFO - PR 424 dependabot[bot] 'Bump omero-signup from `c8610db` to `be76813`' 2024-12-20 00:47:01,397 [ scc.merge] INFO - PR 425 dependabot[bot] 'Bump omero-rois from `5c752d5` to `7c7ed9a`' 2024-12-20 00:47:01,397 [ scc.merge] INFO - PR 426 dependabot[bot] 'Bump omero-prometheus-tools from `18bccb6` to `eb47378`' 2024-12-20 00:47:01,397 [ scc.merge] INFO - PR 427 dependabot[bot] 'Bump omero-web-zarr from `67bb245` to `8f3c313`' 2024-12-20 00:47:01,397 [ scc.merge] INFO 2024-12-20 00:47:01,397 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-20 00:47:01,397 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,397 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-20 00:47:01,398 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-20 00:47:01,398 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-20 00:47:01,398 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-20 00:47:01,398 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-20 00:47:01,398 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-20 00:47:01,398 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-20 00:47:01,398 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-20 00:47:01,398 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-20 00:47:01,398 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO 2024-12-20 00:47:01,398 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-20 00:47:01,399 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-20 00:47:01,399 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-20 00:47:01,399 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-20 00:47:01,399 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-20 00:47:01,399 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-20 00:47:01,399 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,399 [ scc.merge] INFO 2024-12-20 00:47:01,399 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,399 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-20 00:47:01,400 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-20 00:47:01,400 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-20 00:47:01,400 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-20 00:47:01,400 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO 2024-12-20 00:47:01,400 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-20 00:47:01,400 [ scc.merge] INFO Updating 7c7ed9a..bdfeb5e 2024-12-20 00:47:01,400 [ scc.merge] INFO Previously merged: 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 31 jburel 'Install sphinx' 2024-12-20 00:47:01,400 [ scc.merge] INFO - PR 30 jburel 'Add readthedoc config file' 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-20 00:47:01,401 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-20 00:47:01,401 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2024-12-20 00:47:01,401 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-20 00:47:01,401 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-20 00:47:01,401 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-20 00:47:01,401 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-20 00:47:01,401 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-20 00:47:01,401 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,401 [ scc.merge] INFO 2024-12-20 00:47:01,401 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-20 00:47:01,402 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-20 00:47:01,402 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-20 00:47:01,402 [ scc.merge] INFO Already up to date. 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Repository: ome/scripts 2024-12-20 00:47:01,402 [ scc.merge] INFO Excluded PRs: 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-20 00:47:01,402 [ scc.merge] INFO Updating 312afbe..4b4c755 2024-12-20 00:47:01,402 [ scc.merge] INFO Previously merged: 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Merged PRs: 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-20 00:47:01,402 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-20 00:47:01,402 [ scc.merge] INFO 2024-12-20 00:47:01,402 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-20 00:47:01,402 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-20 00:47:01,409 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-20 00:47:01,414 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-20 00:47:01,419 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,425 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-20 00:47:01,425 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-20 00:47:01,430 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-20 00:47:01,436 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-20 00:47:01,441 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-20 00:47:01,446 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-20 00:47:01,451 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-20 00:47:01,456 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-20 00:47:01,461 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-20 00:47:01,466 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-20 00:47:01,471 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-20 00:47:01,476 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-20 00:47:01,482 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-20 00:47:01,487 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-20 00:47:01,492 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-20 00:47:01,498 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-20 00:47:01,505 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-20 00:47:01,510 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-20 00:47:01,516 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-20 00:47:01,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-20 00:47:01,522 [ scc.git] DEBUG Calling 'git remote' 2024-12-20 00:47:01,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 9baf724] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 7c7ed9a nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 312afbe nothing to commit, working tree clean [detached HEAD cc0fb58] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-20 00:47:48,021 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-20 00:47:56,908 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-20 00:47:59,222 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-20 00:48:03,705 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-20 00:48:43,102 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS