![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 35 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Commit message: "Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7" > git rev-list --no-walk 0f0fc56a61fb33d243b6c42580a3c7392b2fab94 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 31 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-12 06:33:09,250 [ scc.config] DEBUG Found github.token 2024-04-12 06:33:09,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-12 06:33:09,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:09,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:10,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-12 06:33:10,549 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 07:04 2024-04-12 06:33:10,550 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:10,557 [ scc.git] DEBUG Check current status 2024-04-12 06:33:10,557 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:10,562 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-12 06:33:10,563 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:10,635 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-12 06:33:10,639 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-12 06:33:10,643 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-12 06:33:10,647 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-12 06:33:10,653 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-12 06:33:10,657 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-12 06:33:10,662 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-12 06:33:10,711 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-12 06:33:10,715 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-12 06:33:10,718 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-12 06:33:10,721 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-12 06:33:10,724 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-12 06:33:10,727 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-12 06:33:10,730 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-12 06:33:10,742 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-12 06:33:10,745 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-12 06:33:10,748 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-12 06:33:10,750 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-12 06:33:10,753 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-12 06:33:10,756 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-12 06:33:10,759 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-12 06:33:10,763 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-12 06:33:10,768 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:11,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-12 06:33:11,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:11,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:12,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:12,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:12,756 [ scc.git] DEBUG Resetting... 2024-04-12 06:33:12,756 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-12 06:33:12,766 [ scc.git] DEBUG HEAD is now at 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-12 06:33:12,766 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-12 06:33:12,866 [ scc.git] DEBUG Check current status 2024-04-12 06:33:12,867 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:12,872 [ scc.git] DEBUG 0f0fc56 Merge pull request #354 from ome/dependabot/submodules/scripts-2078ac7 2024-04-12 06:33:12,872 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:12,917 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-12 06:33:12,920 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-12 06:33:12,922 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-12 06:33:12,925 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-12 06:33:12,928 [ scc.git] DEBUG 3b7ccfa865a44b0309b69c6dca34af2d12343a5d omero-figure (v6.2.0-1-g3b7ccfa8) 2024-04-12 06:33:12,931 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-12 06:33:12,933 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-12 06:33:12,936 [ scc.git] DEBUG a232ed07b982c17d7bb87f2d93a72c451ae836f3 omero-iviewer (v0.13.0-16-ga232ed0) 2024-04-12 06:33:12,939 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-12 06:33:12,942 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-12 06:33:12,945 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-12 06:33:12,948 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-12 06:33:12,951 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-12 06:33:12,954 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-12 06:33:12,958 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-12 06:33:12,961 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-12 06:33:12,964 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-12 06:33:12,967 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-12 06:33:12,970 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-12 06:33:12,973 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-12 06:33:12,978 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-12 06:33:12,981 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-12 06:33:12,983 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-12 06:33:12,983 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-12 06:33:12,983 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-12 06:33:12,983 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-12 06:33:12,983 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-12 06:33:12,983 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:33:13,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-12 06:33:13,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/360 HTTP/1.1" 200 None 2024-04-12 06:33:13,747 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:33:13,747 [ scc.repo] DEBUG - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' 2024-04-12 06:33:14,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/359 HTTP/1.1" 200 None 2024-04-12 06:33:14,218 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:33:14,218 [ scc.repo] DEBUG - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' 2024-04-12 06:33:14,218 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:33:14,219 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:33:14,219 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:33:14,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:33:14,228 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:33:14,228 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:33:14,232 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:33:14,236 [ scc.git] DEBUG Already up to date. 2024-04-12 06:33:14,237 [ scc.git] DEBUG Calling 'git fetch origin pull/359/head' 2024-04-12 06:33:14,612 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-12 06:33:14,613 [ scc.git] DEBUG * branch refs/pull/359/head -> FETCH_HEAD 2024-04-12 06:33:14,618 [ scc.git] DEBUG Calling 'git fetch origin pull/360/head' 2024-04-12 06:33:14,995 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-12 06:33:14,995 [ scc.git] DEBUG * branch refs/pull/360/head -> FETCH_HEAD 2024-04-12 06:33:15,007 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:33:15,007 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:33:15,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:33:15,016 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...988a634859ba60ff21cb4597c824ab941a2bafea' 2024-04-12 06:33:15,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:33:15,040 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 359 (Bump omero-figure from `3b7ccfa` to `852b510`) 988a634859ba60ff21cb4597c824ab941a2bafea' 2024-04-12 06:33:15,060 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:33:15,063 [ scc.git] DEBUG omero-figure | 2 +- 2024-04-12 06:33:15,063 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-12 06:33:15,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:15,222 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6e46a7e41e353c2f495a8538ed4c47bde4474e29' 2024-04-12 06:33:15,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:33:15,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 360 (Bump omero-iviewer from `a232ed0` to `9d8d147`) 6e46a7e41e353c2f495a8538ed4c47bde4474e29' 2024-04-12 06:33:15,249 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:33:15,251 [ scc.git] DEBUG omero-iviewer | 2 +- 2024-04-12 06:33:15,251 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-12 06:33:15,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:15,645 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:33:15,732 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '852b5109c4c0503d2740da64714512e83c619db0' 2024-04-12 06:33:15,798 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '9d8d14738ebdd289bee26ff946e29f8f63c53596' 2024-04-12 06:33:15,799 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:33:15,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:33:15,804 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:33:16,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1c0c6cd460> has no local changes 2024-04-12 06:33:16,492 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:33:16,596 [ scc.git] DEBUG [detached HEAD d42c1b4] merge master -Dorg -Snone 2024-04-12 06:33:16,597 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-12 06:33:16,597 [ scc.merge] INFO Already up to date. 2024-04-12 06:33:16,597 [ scc.merge] INFO 2024-04-12 06:33:16,597 [ scc.merge] INFO Merged PRs: 2024-04-12 06:33:16,597 [ scc.merge] INFO - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' 2024-04-12 06:33:16,597 [ scc.merge] INFO - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' 2024-04-12 06:33:16,597 [ scc.merge] INFO 2024-04-12 06:33:16,597 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-12 06:33:16,597 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-12 06:33:25,931 [ scc.config] DEBUG Found github.token 2024-04-12 06:33:25,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-12 06:33:26,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:26,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:33:26,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-12 06:33:26,965 [ scc.gh] DEBUG 4986 remaining from 5000 (Reset at 07:04 2024-04-12 06:33:26,965 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:26,970 [ scc.git] DEBUG Check current status 2024-04-12 06:33:26,970 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:26,974 [ scc.git] DEBUG d42c1b4 merge master -Dorg -Snone 2024-04-12 06:33:26,974 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:27,023 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-12 06:33:27,026 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-12 06:33:27,029 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-12 06:33:27,032 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-12 06:33:27,036 [ scc.git] DEBUG 852b5109c4c0503d2740da64714512e83c619db0 omero-figure (v6.2.0-3-g852b5109) 2024-04-12 06:33:27,039 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-12 06:33:27,042 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-12 06:33:27,045 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-12 06:33:27,048 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-12 06:33:27,051 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-12 06:33:27,054 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-12 06:33:27,057 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-12 06:33:27,060 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-12 06:33:27,062 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-12 06:33:27,065 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-12 06:33:27,068 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-12 06:33:27,070 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-12 06:33:27,073 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-12 06:33:27,081 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-12 06:33:27,087 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-12 06:33:27,092 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-12 06:33:27,098 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-12 06:33:27,108 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:27,108 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-12 06:33:27,111 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-12 06:33:27,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-12 06:33:27,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:28,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:28,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:29,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:29,186 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:29,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-12 06:33:29,265 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:29,270 [ scc.git] DEBUG Check current status 2024-04-12 06:33:29,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:29,274 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-12 06:33:29,275 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:29,321 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:29,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-12 06:33:30,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:30,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:30,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:31,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:31,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:31,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:31,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-12 06:33:31,387 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:31,391 [ scc.git] DEBUG Check current status 2024-04-12 06:33:31,392 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:31,395 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-12 06:33:31,395 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:31,437 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:31,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-12 06:33:32,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:32,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:33,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:33,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:33,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:33,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:33,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-12 06:33:33,613 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:33,617 [ scc.git] DEBUG Check current status 2024-04-12 06:33:33,618 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:33,621 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-12 06:33:33,622 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:33,666 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:34,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-12 06:33:34,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:34,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:35,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:35,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:35,810 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:35,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:35,848 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-12 06:33:35,848 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:35,852 [ scc.git] DEBUG Check current status 2024-04-12 06:33:35,852 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:35,856 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-12 06:33:35,857 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:35,895 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:36,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-12 06:33:36,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:37,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:37,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:38,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:38,052 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:38,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:38,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-12 06:33:38,091 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:38,095 [ scc.git] DEBUG Check current status 2024-04-12 06:33:38,095 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:38,099 [ scc.git] DEBUG 852b5109 Merge pull request #551 from jburel/build 2024-04-12 06:33:38,099 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:38,138 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:38,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-12 06:33:38,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:39,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:39,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:40,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:40,259 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:40,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:40,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-12 06:33:40,301 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:40,304 [ scc.git] DEBUG Check current status 2024-04-12 06:33:40,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:40,308 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-12 06:33:40,308 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:40,352 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:40,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-12 06:33:41,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:41,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:42,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:42,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:42,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:42,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:42,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-12 06:33:42,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:42,534 [ scc.git] DEBUG Check current status 2024-04-12 06:33:42,534 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:42,538 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-12 06:33:42,538 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:42,578 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:42,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-12 06:33:43,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:43,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:44,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:44,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:44,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:44,752 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:44,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-12 06:33:44,753 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:44,757 [ scc.git] DEBUG Check current status 2024-04-12 06:33:44,758 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:44,761 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-12 06:33:44,762 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:44,807 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:45,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-12 06:33:45,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:46,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:46,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:46,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:46,889 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:46,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:46,937 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-12 06:33:46,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:46,942 [ scc.git] DEBUG Check current status 2024-04-12 06:33:46,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:46,946 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-12 06:33:46,946 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:46,993 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:47,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-12 06:33:47,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:48,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:48,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:49,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:49,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:49,137 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:49,138 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-12 06:33:49,138 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:49,143 [ scc.git] DEBUG Check current status 2024-04-12 06:33:49,143 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:49,147 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-12 06:33:49,148 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:49,192 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:49,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-12 06:33:50,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:50,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:50,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:51,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:51,319 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:51,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:51,364 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-12 06:33:51,364 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:51,368 [ scc.git] DEBUG Check current status 2024-04-12 06:33:51,368 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:51,372 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-12 06:33:51,373 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:51,421 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:51,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-12 06:33:52,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:52,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:53,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:53,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:53,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:53,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:53,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-12 06:33:53,594 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:53,599 [ scc.git] DEBUG Check current status 2024-04-12 06:33:53,599 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:53,604 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-12 06:33:53,604 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:53,662 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:54,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-12 06:33:54,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:54,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:55,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:55,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:55,740 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:55,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:55,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-12 06:33:55,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:55,788 [ scc.git] DEBUG Check current status 2024-04-12 06:33:55,788 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:55,792 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-12 06:33:55,792 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:55,838 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:56,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-12 06:33:56,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:57,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:57,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:33:57,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:33:57,949 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:33:57,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:33:57,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-12 06:33:57,993 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:33:58,000 [ scc.git] DEBUG Check current status 2024-04-12 06:33:58,000 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:33:58,005 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-12 06:33:58,005 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:33:58,051 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:33:58,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-12 06:33:58,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:33:59,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:33:59,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:00,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:00,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:00,186 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:00,187 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-12 06:34:00,187 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:00,193 [ scc.git] DEBUG Check current status 2024-04-12 06:34:00,193 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:00,197 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-12 06:34:00,198 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:00,238 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:00,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-12 06:34:00,611 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-12 06:34:00,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-12 06:34:01,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:01,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:02,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:02,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:02,559 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:02,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:02,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-12 06:34:02,606 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:02,611 [ scc.git] DEBUG Check current status 2024-04-12 06:34:02,611 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:02,616 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-12 06:34:02,616 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:02,658 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:03,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-12 06:34:03,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:03,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:04,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:04,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:04,775 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:04,817 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:04,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-12 06:34:04,819 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:04,824 [ scc.git] DEBUG Check current status 2024-04-12 06:34:04,824 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:04,829 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-12 06:34:04,829 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:04,872 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:05,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-12 06:34:05,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:06,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:06,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:07,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:07,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:07,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:07,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-12 06:34:07,043 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:07,049 [ scc.git] DEBUG Check current status 2024-04-12 06:34:07,049 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:07,054 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-12 06:34:07,054 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:07,104 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:07,105 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-12 06:34:07,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-12 06:34:07,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:08,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:08,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:09,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:09,210 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:09,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:09,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-12 06:34:09,249 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:09,254 [ scc.git] DEBUG Check current status 2024-04-12 06:34:09,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:09,259 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-12 06:34:09,259 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:09,302 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:09,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-12 06:34:09,629 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-12 06:34:09,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-12 06:34:10,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:10,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:11,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:11,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:11,576 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:11,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:11,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-12 06:34:11,620 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:11,627 [ scc.git] DEBUG Check current status 2024-04-12 06:34:11,627 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:11,633 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-12 06:34:11,633 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:11,680 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:11,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-12 06:34:11,995 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-12 06:34:12,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-12 06:34:12,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:13,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:13,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:13,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:13,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:14,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:14,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-12 06:34:14,013 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:14,020 [ scc.git] DEBUG Check current status 2024-04-12 06:34:14,021 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:14,026 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-12 06:34:14,026 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:14,069 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:14,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-12 06:34:14,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:15,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:15,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:16,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:16,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:16,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:16,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-12 06:34:16,212 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-12 06:34:16,217 [ scc.git] DEBUG Check current status 2024-04-12 06:34:16,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:16,222 [ scc.git] DEBUG 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-12 06:34:16,222 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:16,268 [ scc.config] DEBUG Found remote.origin.url 2024-04-12 06:34:16,269 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-12 06:34:16,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-12 06:34:16,589 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-12 06:34:16,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-12 06:34:17,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-12 06:34:17,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-12 06:34:18,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:18,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-12 06:34:18,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:18,543 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:18,543 [ scc.git] DEBUG Resetting... 2024-04-12 06:34:18,544 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-12 06:34:18,555 [ scc.git] DEBUG HEAD is now at d42c1b4 merge master -Dorg -Snone 2024-04-12 06:34:18,555 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-12 06:34:18,664 [ scc.git] DEBUG Check current status 2024-04-12 06:34:18,664 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-12 06:34:18,671 [ scc.git] DEBUG d42c1b4 merge master -Dorg -Snone 2024-04-12 06:34:18,671 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-12 06:34:18,733 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-12 06:34:18,736 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-12 06:34:18,739 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-12 06:34:18,743 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-12 06:34:18,746 [ scc.git] DEBUG 852b5109c4c0503d2740da64714512e83c619db0 omero-figure (v6.2.0-3-g852b5109) 2024-04-12 06:34:18,749 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-12 06:34:18,752 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-12 06:34:18,756 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-12 06:34:18,759 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-12 06:34:18,763 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-12 06:34:18,766 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-12 06:34:18,769 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-12 06:34:18,772 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-12 06:34:18,775 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-12 06:34:18,779 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-12 06:34:18,782 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-12 06:34:18,784 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-12 06:34:18,787 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-12 06:34:18,790 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-12 06:34:18,792 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-12 06:34:18,795 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-12 06:34:18,798 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-12 06:34:18,800 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-12 06:34:18,800 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-12 06:34:18,800 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-12 06:34:18,800 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-12 06:34:18,800 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-12 06:34:18,800 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-12 06:34:18,800 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:19,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-12 06:34:19,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/360 HTTP/1.1" 200 None 2024-04-12 06:34:19,495 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:34:20,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6e46a7e41e353c2f495a8538ed4c47bde4474e29 HTTP/1.1" 200 None 2024-04-12 06:34:20,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6e46a7e41e353c2f495a8538ed4c47bde4474e29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:20,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6e46a7e41e353c2f495a8538ed4c47bde4474e29 HTTP/1.1" 200 None 2024-04-12 06:34:21,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6e46a7e41e353c2f495a8538ed4c47bde4474e29?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:21,374 [ scc.repo] DEBUG - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' 2024-04-12 06:34:22,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/359 HTTP/1.1" 200 None 2024-04-12 06:34:22,031 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:34:22,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/988a634859ba60ff21cb4597c824ab941a2bafea HTTP/1.1" 200 None 2024-04-12 06:34:23,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/988a634859ba60ff21cb4597c824ab941a2bafea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:23,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/988a634859ba60ff21cb4597c824ab941a2bafea HTTP/1.1" 200 None 2024-04-12 06:34:23,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/988a634859ba60ff21cb4597c824ab941a2bafea?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:23,931 [ scc.repo] DEBUG - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' 2024-04-12 06:34:23,931 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:34:23,931 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:23,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:23,937 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:34:23,941 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:34:23,941 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:34:23,946 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:34:23,952 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:23,952 [ scc.git] DEBUG Calling 'git fetch origin pull/359/head' 2024-04-12 06:34:24,343 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-12 06:34:24,343 [ scc.git] DEBUG * branch refs/pull/359/head -> FETCH_HEAD 2024-04-12 06:34:24,349 [ scc.git] DEBUG Calling 'git fetch origin pull/360/head' 2024-04-12 06:34:24,728 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-12 06:34:24,728 [ scc.git] DEBUG * branch refs/pull/360/head -> FETCH_HEAD 2024-04-12 06:34:24,733 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:34:24,733 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:24,733 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:24,739 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...988a634859ba60ff21cb4597c824ab941a2bafea' 2024-04-12 06:34:24,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:24,751 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 359 (Bump omero-figure from `3b7ccfa` to `852b510`) 988a634859ba60ff21cb4597c824ab941a2bafea' 2024-04-12 06:34:24,756 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:24,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:24,903 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6e46a7e41e353c2f495a8538ed4c47bde4474e29' 2024-04-12 06:34:24,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:24,913 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 360 (Bump omero-iviewer from `a232ed0` to `9d8d147`) 6e46a7e41e353c2f495a8538ed4c47bde4474e29' 2024-04-12 06:34:24,918 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:25,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:25,307 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:34:25,359 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:25,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:25,365 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:25,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-12 06:34:25,724 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:34:25,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-12 06:34:25,724 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:25,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:25,730 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:34:25,736 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:34:25,736 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:34:25,741 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:34:25,747 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:25,747 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:34:25,747 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:25,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:25,752 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:34:25,791 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:25,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:25,797 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:25,842 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:34:25,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d245ffd0> has no local changes 2024-04-12 06:34:25,850 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:34:25,861 [ scc.git] DEBUG [detached HEAD 2a782b6] merge master -Dorg -Ssuccess-only 2024-04-12 06:34:25,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:25,862 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:26,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-12 06:34:26,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-12 06:34:27,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-12 06:34:27,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-12 06:34:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:28,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:34:29,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-12 06:34:29,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:29,687 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-12 06:34:30,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-12 06:34:30,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-12 06:34:30,664 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:34:30,664 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-12 06:34:30,664 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:30,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:30,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:34:30,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:34:30,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:34:30,680 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:34:30,686 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:30,686 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-12 06:34:31,117 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-12 06:34:31,118 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-12 06:34:31,122 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:34:31,123 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:31,123 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:31,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-12 06:34:31,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:31,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-12 06:34:31,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:34:31,153 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-12 06:34:31,153 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-12 06:34:31,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:31,324 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:34:31,371 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:31,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:31,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:31,421 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:34:31,428 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d248b0d0> has no local changes 2024-04-12 06:34:31,428 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:34:31,437 [ scc.git] DEBUG [detached HEAD 9c9bfb2] merge master -Dorg -Ssuccess-only 2024-04-12 06:34:31,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:31,438 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:31,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-12 06:34:32,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-12 06:34:32,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-12 06:34:33,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-12 06:34:33,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-12 06:34:34,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-12 06:34:34,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:35,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-12 06:34:35,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:35,686 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-12 06:34:36,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-12 06:34:36,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-12 06:34:37,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-12 06:34:37,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-12 06:34:37,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-12 06:34:37,992 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:34:37,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-12 06:34:37,993 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:37,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:38,004 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:34:38,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:34:38,017 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:34:38,029 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:34:38,040 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:38,041 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-12 06:34:38,517 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-12 06:34:38,517 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-12 06:34:38,523 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:34:38,523 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:38,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:38,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-12 06:34:38,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:38,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-12 06:34:38,551 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:34:38,554 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-12 06:34:38,554 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-12 06:34:38,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:38,714 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:34:38,754 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:38,754 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:38,760 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:38,799 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:34:38,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d13c9f40> has no local changes 2024-04-12 06:34:38,805 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:34:38,814 [ scc.git] DEBUG [detached HEAD dc5d379] merge master -Dorg -Ssuccess-only 2024-04-12 06:34:38,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:38,815 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:39,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-12 06:34:39,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-12 06:34:40,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-12 06:34:40,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-12 06:34:41,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-12 06:34:41,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:42,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:34:42,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-12 06:34:43,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:43,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-12 06:34:43,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-12 06:34:43,985 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-12 06:34:44,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-12 06:34:45,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-12 06:34:45,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-12 06:34:46,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-12 06:34:46,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:46,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-12 06:34:47,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:47,378 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-12 06:34:47,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-12 06:34:48,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-12 06:34:48,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-12 06:34:49,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-12 06:34:49,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:50,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-12 06:34:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:50,786 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-12 06:34:50,787 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:34:50,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-12 06:34:50,787 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:50,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:50,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:34:50,797 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:34:50,797 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:34:50,803 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:34:50,809 [ scc.git] DEBUG Already up to date. 2024-04-12 06:34:50,809 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-12 06:34:51,221 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-12 06:34:51,221 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-12 06:34:51,227 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-12 06:34:51,703 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-12 06:34:51,703 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-12 06:34:51,710 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-12 06:34:52,184 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-12 06:34:52,184 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-12 06:34:52,191 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:34:52,192 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:52,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:52,200 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-12 06:34:52,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:52,225 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-12 06:34:52,286 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-12 06:34:52,286 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-12 06:34:52,286 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-12 06:34:52,286 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:34:52,287 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:34:52,295 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-12 06:34:52,304 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-12 06:34:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:52,469 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-12 06:34:52,483 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-12 06:34:52,494 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-12 06:34:52,505 [ scc.config] DEBUG Found github.token 2024-04-12 06:34:52,506 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-12 06:34:52,506 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-12 06:34:52,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:52,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-12 06:34:52,602 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-12 06:34:52,602 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-12 06:34:52,602 [ scc.git] DEBUG Auto-merging setup.py 2024-04-12 06:34:52,602 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-12 06:34:52,602 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-12 06:34:52,602 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-12 06:34:52,603 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-12 06:34:52,603 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:34:52,603 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:34:52,612 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-12 06:34:52,622 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-12 06:34:52,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:52,898 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-12 06:34:52,905 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-12 06:34:52,910 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-04-12 06:34:52,917 [ scc.config] DEBUG Found github.token 2024-04-12 06:34:52,917 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-12 06:34:52,917 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-12 06:34:52,924 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:52,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-12 06:34:52,939 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-12 06:34:52,939 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-12 06:34:52,940 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:34:52,943 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-12 06:34:52,943 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-12 06:34:52,943 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-12 06:34:52,943 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-12 06:34:52,943 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-12 06:34:52,943 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-12 06:34:53,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:34:53,312 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:34:53,362 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:34:53,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:34:53,367 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:34:53,406 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:34:53,412 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d136d640> has no local changes 2024-04-12 06:34:53,412 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:34:53,421 [ scc.git] DEBUG [detached HEAD 57f228b] merge master -Dorg -Ssuccess-only 2024-04-12 06:34:53,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:34:53,422 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:34:53,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-12 06:34:54,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/550 HTTP/1.1" 200 None 2024-04-12 06:34:54,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/550/comments HTTP/1.1" 200 None 2024-04-12 06:34:55,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5c3378fc77523b5998227b3a1b0a8a5b6dfdef74 HTTP/1.1" 200 None 2024-04-12 06:34:55,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5c3378fc77523b5998227b3a1b0a8a5b6dfdef74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:56,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5c3378fc77523b5998227b3a1b0a8a5b6dfdef74/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:34:56,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/5c3378fc77523b5998227b3a1b0a8a5b6dfdef74 HTTP/1.1" 200 None 2024-04-12 06:34:57,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/5c3378fc77523b5998227b3a1b0a8a5b6dfdef74?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:34:57,081 [ scc.repo] DEBUG - PR 550 will-moore 'Don't update zoom to undefined on setId' 2024-04-12 06:34:57,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-12 06:34:57,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/548 HTTP/1.1" 200 None 2024-04-12 06:34:58,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-04-12 06:34:58,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:34:59,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:34:59,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/32b0ccd55ce3c95dabcf8ebf817b032e4b864438 HTTP/1.1" 200 None 2024-04-12 06:35:00,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/32b0ccd55ce3c95dabcf8ebf817b032e4b864438?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:00,362 [ scc.repo] DEBUG - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-04-12 06:35:00,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-12 06:35:01,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-12 06:35:01,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-12 06:35:02,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-12 06:35:02,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/054222a530698859a4286d345573d36090ce7c15 HTTP/1.1" 200 None 2024-04-12 06:35:03,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/054222a530698859a4286d345573d36090ce7c15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:03,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/054222a530698859a4286d345573d36090ce7c15/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:04,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/054222a530698859a4286d345573d36090ce7c15 HTTP/1.1" 200 None 2024-04-12 06:35:04,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/054222a530698859a4286d345573d36090ce7c15?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:04,743 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-12 06:35:04,744 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:04,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-12 06:35:04,744 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:04,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:04,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:04,760 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:04,760 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:04,768 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:04,777 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:04,777 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-12 06:35:05,649 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-12 06:35:05,649 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-12 06:35:05,653 [ scc.git] DEBUG Calling 'git fetch origin pull/548/head' 2024-04-12 06:35:06,050 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-12 06:35:06,050 [ scc.git] DEBUG * branch refs/pull/548/head -> FETCH_HEAD 2024-04-12 06:35:06,056 [ scc.git] DEBUG Calling 'git fetch origin pull/550/head' 2024-04-12 06:35:06,505 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-12 06:35:06,505 [ scc.git] DEBUG * branch refs/pull/550/head -> FETCH_HEAD 2024-04-12 06:35:06,512 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:06,512 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:06,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:06,522 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...054222a530698859a4286d345573d36090ce7c15' 2024-04-12 06:35:06,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:06,556 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 054222a530698859a4286d345573d36090ce7c15' 2024-04-12 06:35:06,601 [ scc.git] DEBUG Auto-merging .bumpversion.cfg 2024-04-12 06:35:06,602 [ scc.git] DEBUG Auto-merging setup.py 2024-04-12 06:35:06,602 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:06,644 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-12 06:35:06,645 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-12 06:35:06,645 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG README.rst | 58 +- 2024-04-12 06:35:06,645 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-12 06:35:06,645 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-12 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[ scc.git] DEBUG .../img/bootstrap-colorpicker/saturation.png | Bin 8817 -> 0 bytes 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../js/bootstrap-colorpicker.js | 1028 --- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../js/bootstrap-colorpicker.min.js | 1 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../figure/3rdparty/jquery-1.11.1/jquery.min.js | 4 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.base.css | 28 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../jquery-ui-1.10.4/css/jquery.ui.slider.css | 73 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../3rdparty/jquery-ui-1.10.4/jquery-ui.min.js | 12 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG omero_figure/static/figure/3rdparty/json2.js | 481 -- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.js | 1740 ----- 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.min.js | 1 - 2024-04-12 06:35:06,645 [ scc.git] DEBUG .../3rdparty/mousetrap-1.5.3/mousetrap.min.js | 11 - 2024-04-12 06:35:06,646 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael-min.js | 11 - 2024-04-12 06:35:06,646 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael.js | 8117 -------------------- 2024-04-12 06:35:06,646 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/scaleraphael.js | 102 - 2024-04-12 06:35:06,646 [ scc.git] DEBUG .../figure/3rdparty/underscore-1.13.1-umd-min.js | 6 - 2024-04-12 06:35:06,646 [ scc.git] DEBUG omero_figure/templates/figure/index.html | 1175 --- 2024-04-12 06:35:06,646 [ scc.git] DEBUG omero_figure/views.py | 59 +- 2024-04-12 06:35:06,646 [ scc.git] DEBUG package-lock.json | 6531 +--------------- 2024-04-12 06:35:06,646 [ scc.git] DEBUG package.json | 27 +- 2024-04-12 06:35:06,648 [ scc.git] DEBUG setup.py | 9 +- 2024-04-12 06:35:06,648 [ scc.git] DEBUG spec/ViewportViewSpec.js | 99 - 2024-04-12 06:35:06,648 [ scc.git] DEBUG spec/images/testImage.png | Bin 24088 -> 0 bytes 2024-04-12 06:35:06,648 [ scc.git] DEBUG spec/javascripts/PanelSpec.js | 177 - 2024-04-12 06:35:06,648 [ scc.git] DEBUG spec/javascripts/ViewportViewSpec.js | 69 - 2024-04-12 06:35:06,648 [ scc.git] DEBUG spec/javascripts/fixtures/previewTab.html | 19 - 2024-04-12 06:35:06,648 [ scc.git] DEBUG src/.env | 2 + 2024-04-12 06:35:06,649 [ scc.git] DEBUG {omero_figure/static/figure => src}/css/figure.css | 437 +- 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/arrow-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/button-down-grey.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/button-down.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/button-flat.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/button-up.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/crop20.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/cursor-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/ellipse-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/gradient.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../hue-horizontal.png => src/images/hue.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/line-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/luts_10.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/markdown_dark32x20.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/markdown_light32x20.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/polygon-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../figure => src}/images/polyline-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../static/figure => src}/images/projection20.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG .../images/square-outline-icon-16.png | Bin 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/index.html | 1891 +++++ 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/app.js | 185 - 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/main.js | 167 + 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/models/figure_model.js | 101 +- 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/models/panel_model.js | 10 +- 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/models/roi_model.js | 7 +- 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/models/undo.js | 10 +- 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/shapeEditorTest.js | 259 + 2024-04-12 06:35:06,649 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 557 ++ 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/shape_editor/line.js | 586 ++ 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/shape_editor/polygon.js | 417 + 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/shape_editor/rect.js | 497 ++ 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 671 ++ 2024-04-12 06:35:06,650 [ scc.git] DEBUG .../js/views}/backbone.mousetrap.js | 18 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 150 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 27 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/colorpicker.js | 132 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 38 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/figure_view.js | 144 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/files.js | 82 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/info_panel_view.js | 20 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 53 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/legend_view.js | 13 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/lutpicker.js | 39 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/modal_views.js | 57 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/panel_view.js | 39 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/raphael-rect.js | 6 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/right_panel_view.js | 443 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 17 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 47 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/scalebar_form_view.js | 24 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/svg_model_view.js | 11 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG .../ome.csrf.js => src/js/views/util.csrf.js | 29 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/util.js | 68 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/js/views/zt_sliders_view.js | 332 + 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/scss/styles.scss | 2 + 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/shapeEditorTest.html | 149 + 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/templates/channel_slider.template.html | 91 + 2024-04-12 06:35:06,650 [ scc.git] DEBUG src/templates/channel_slider_template.html | 78 - 2024-04-12 06:35:06,650 [ scc.git] DEBUG ...el_template.html => figure_panel.template.html} | 2 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG ...le_item.html => figure_file_item.template.html} | 0 2024-04-12 06:35:06,650 [ scc.git] DEBUG ...te.html => image_display_options.template.html} | 11 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG ...anel_template.html => info_panel.template.html} | 8 +- 2024-04-12 06:35:06,650 [ scc.git] DEBUG .../{label_template.html => label.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...ate.html => label_right_vertical.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...ble_template.html => label_table.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ..._template.html => label_vertical.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...orm_template.html => labels_form.template.html} | 2 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-04-12 06:35:06,651 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/rois_form.template.html | 94 + 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/rois_form_template.html | 93 - 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 143 + 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/scalebar_form_template.html | 143 - 2024-04-12 06:35:06,651 [ scc.git] DEBUG ..._template.html => scalebar_panel.template.html} | 0 2024-04-12 06:35:06,651 [ scc.git] DEBUG ...r_template.html => shape_toolbar.template.html} | 62 +- 2024-04-12 06:35:06,651 [ scc.git] DEBUG src/templates/viewport.template.html | 5 + 2024-04-12 06:35:06,652 [ scc.git] DEBUG ..._template.html => viewport_inner.template.html} | 0 2024-04-12 06:35:06,652 [ scc.git] DEBUG src/templates/viewport_template.html | 9 - 2024-04-12 06:35:06,652 [ scc.git] DEBUG ...anel_template.html => xywh_panel.template.html} | 30 +- 2024-04-12 06:35:06,652 [ scc.git] DEBUG ..._crop_template.html => zoom_crop.template.html} | 10 +- 2024-04-12 06:35:06,652 [ scc.git] DEBUG vite.config.js | 21 + 2024-04-12 06:35:06,652 [ scc.git] DEBUG 136 files changed, 7923 insertions(+), 32992 deletions(-) 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 Gruntfile.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG create mode 100755 deploy_build.sh 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 docs/demo/index.html 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/backbone-1.0.0.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/backbone.mousetrap/README.md 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/css/bootstrap.min.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.eot 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.svg 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.ttf 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/fonts/glyphicons-halflings-regular.woff 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/js/bootstrap.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-3.0.0/js/bootstrap.min.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/css/bootstrap-colorpicker.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/css/bootstrap-colorpicker.min.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/alpha-horizontal.png 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/alpha.png 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue.png 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/saturation.png 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.min.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-1.11.1/jquery.min.js 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.base.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.slider.css 2024-04-12 06:35:06,652 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/jquery-ui.min.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/json2.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.min.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/mousetrap-1.5.3/mousetrap.min.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael-min.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/scaleraphael.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/underscore-1.13.1-umd-min.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 omero_figure/templates/figure/index.html 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 spec/ViewportViewSpec.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 spec/images/testImage.png 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 spec/javascripts/PanelSpec.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 spec/javascripts/ViewportViewSpec.js 2024-04-12 06:35:06,653 [ scc.git] DEBUG delete mode 100644 spec/javascripts/fixtures/previewTab.html 2024-04-12 06:35:06,653 [ scc.git] DEBUG create mode 100644 src/.env 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/css/figure.css (70%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/arrow-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down-grey.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-flat.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-up.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/crop20.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/cursor-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/ellipse-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/gradient.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue-horizontal.png => src/images/hue.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%) 2024-04-12 06:35:06,653 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/index.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG delete mode 100644 src/js/app.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/main.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-12 06:35:06,654 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-12 06:35:06,655 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-12 06:35:06,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:06,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-04-12 06:35:06,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:06,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 548 (Fix cropping of panel labels and float usage for shape labels) 32b0ccd55ce3c95dabcf8ebf817b032e4b864438' 2024-04-12 06:35:06,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:06,864 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 6 +++--- 2024-04-12 06:35:06,864 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-04-12 06:35:07,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:07,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5c3378fc77523b5998227b3a1b0a8a5b6dfdef74' 2024-04-12 06:35:07,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:07,265 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 550 (Don't update zoom to undefined on setId) 5c3378fc77523b5998227b3a1b0a8a5b6dfdef74' 2024-04-12 06:35:07,313 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-12 06:35:07,314 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:07,318 [ scc.git] DEBUG src/js/models/panel_model.js | 1 - 2024-04-12 06:35:07,319 [ scc.git] DEBUG 1 file changed, 1 deletion(-) 2024-04-12 06:35:07,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:07,646 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:07,706 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:07,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:07,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:07,761 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:07,774 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d13cabe0> has no local changes 2024-04-12 06:35:07,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' - PR 550 will-moore 'Don't update zoom to undefined on setId' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:07,787 [ scc.git] DEBUG [detached HEAD a5fcce3b] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:07,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:07,788 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:08,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-12 06:35:08,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-12 06:35:09,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-12 06:35:09,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-12 06:35:10,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:10,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-12 06:35:11,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:11,074 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-12 06:35:11,074 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:11,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-12 06:35:11,074 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:11,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:11,082 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:11,088 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:11,088 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:11,101 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:11,111 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:11,111 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-12 06:35:11,566 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-12 06:35:11,566 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-12 06:35:11,574 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:11,575 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:11,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:11,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-12 06:35:11,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:11,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-12 06:35:11,613 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-12 06:35:11,614 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:11,617 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-12 06:35:11,617 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-12 06:35:11,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:11,771 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:11,815 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:11,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:11,822 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:11,870 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:11,881 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d137e550> has no local changes 2024-04-12 06:35:11,882 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:11,902 [ scc.git] DEBUG [detached HEAD e08d59c] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:11,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:11,904 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:12,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-12 06:35:12,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-12 06:35:12,787 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:35:13,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-12 06:35:13,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:14,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:15,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-12 06:35:15,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:15,440 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-12 06:35:15,440 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:15,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-12 06:35:15,440 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:15,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:15,449 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:15,455 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:15,455 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:15,462 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:15,469 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:15,469 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-12 06:35:15,884 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-12 06:35:15,884 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-12 06:35:15,890 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:15,891 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:15,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:15,899 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-12 06:35:15,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:15,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-12 06:35:15,938 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:15,944 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-12 06:35:15,944 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-12 06:35:16,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:16,119 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:16,204 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:16,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:16,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:16,318 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:16,337 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d13829d0> has no local changes 2024-04-12 06:35:16,337 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:16,362 [ scc.git] DEBUG [detached HEAD f452a6a] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:16,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:16,364 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:16,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-12 06:35:17,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-12 06:35:17,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-12 06:35:18,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None 2024-04-12 06:35:18,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:19,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:19,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/efda99710532f9743896717e88f0e68ca23ec3b2 HTTP/1.1" 200 None 2024-04-12 06:35:19,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/efda99710532f9743896717e88f0e68ca23ec3b2?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:19,859 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-12 06:35:20,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464 HTTP/1.1" 200 None 2024-04-12 06:35:20,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/464/comments HTTP/1.1" 200 None 2024-04-12 06:35:21,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-12 06:35:21,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:22,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:22,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/97542d9b749f93d4902f7dce703bbf2a04316a98 HTTP/1.1" 200 None 2024-04-12 06:35:23,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/97542d9b749f93d4902f7dce703bbf2a04316a98?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:23,345 [ scc.repo] DEBUG - PR 464 will-moore 'Tile load error warning' 2024-04-12 06:35:23,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-12 06:35:24,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-12 06:35:24,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-12 06:35:25,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:25,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-12 06:35:26,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:26,052 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-12 06:35:26,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456 HTTP/1.1" 200 None 2024-04-12 06:35:26,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/456/comments HTTP/1.1" 200 None 2024-04-12 06:35:27,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-12 06:35:27,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:28,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:28,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745 HTTP/1.1" 200 None 2024-04-12 06:35:29,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/2954dd294c5d9f89b64ca4cedcc76dd0c9a32745?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:29,324 [ scc.repo] DEBUG - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-12 06:35:29,324 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:29,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-12 06:35:29,324 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:29,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:29,330 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:29,336 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:29,337 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:29,344 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:29,352 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:29,352 [ scc.git] DEBUG Calling 'git fetch origin pull/456/head' 2024-04-12 06:35:30,867 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-12 06:35:30,868 [ scc.git] DEBUG * branch refs/pull/456/head -> FETCH_HEAD 2024-04-12 06:35:30,875 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-12 06:35:31,286 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-12 06:35:31,287 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-12 06:35:31,292 [ scc.git] DEBUG Calling 'git fetch origin pull/464/head' 2024-04-12 06:35:32,037 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-12 06:35:32,037 [ scc.git] DEBUG * branch refs/pull/464/head -> FETCH_HEAD 2024-04-12 06:35:32,042 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-12 06:35:33,296 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-12 06:35:33,297 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-12 06:35:33,304 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:33,304 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:33,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:33,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-12 06:35:33,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:33,330 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 456 (Don't use tiles for non-big movies) 2954dd294c5d9f89b64ca4cedcc76dd0c9a32745' 2024-04-12 06:35:33,360 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:33,364 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 5 +++-- 2024-04-12 06:35:33,364 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-04-12 06:35:33,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:33,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-12 06:35:33,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:33,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-12 06:35:33,605 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:33,608 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-12 06:35:33,608 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-12 06:35:33,609 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-12 06:35:33,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:33,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-12 06:35:33,946 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:33,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 464 (Tile load error warning) 97542d9b749f93d4902f7dce703bbf2a04316a98' 2024-04-12 06:35:33,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:34,001 [ scc.git] DEBUG css/app.css | 22 ++++++++++++++++++++++ 2024-04-12 06:35:34,001 [ scc.git] DEBUG src/events/events.js | 2 ++ 2024-04-12 06:35:34,001 [ scc.git] DEBUG src/index-dev.html | 6 +++--- 2024-04-12 06:35:34,001 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-12 06:35:34,001 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 4 +++- 2024-04-12 06:35:34,001 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 39 +++++++++++++++++++++++++++++++++++++-- 2024-04-12 06:35:34,001 [ scc.git] DEBUG 6 files changed, 68 insertions(+), 7 deletions(-) 2024-04-12 06:35:34,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:34,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...efda99710532f9743896717e88f0e68ca23ec3b2' 2024-04-12 06:35:34,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:34,374 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) efda99710532f9743896717e88f0e68ca23ec3b2' 2024-04-12 06:35:34,407 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-12 06:35:34,408 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:34,412 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-12 06:35:34,412 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-12 06:35:34,412 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-12 06:35:34,412 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-12 06:35:34,412 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-12 06:35:34,412 [ scc.git] DEBUG src/utils/figure.js | 210 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-12 06:35:34,413 [ scc.git] DEBUG 6 files changed, 284 insertions(+), 6 deletions(-) 2024-04-12 06:35:34,413 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-12 06:35:34,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:34,778 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:34,819 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:34,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:34,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:34,867 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:34,876 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d03245b0> has no local changes 2024-04-12 06:35:34,876 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:34,888 [ scc.git] DEBUG [detached HEAD 3438a0a] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:34,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:34,889 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:35,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-12 06:35:35,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-12 06:35:36,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-12 06:35:36,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-12 06:35:37,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:37,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:38,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-12 06:35:38,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:38,594 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-12 06:35:38,594 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:38,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-12 06:35:38,594 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:38,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:38,601 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:38,608 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:38,609 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:38,616 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:38,622 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:38,623 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-12 06:35:39,023 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-12 06:35:39,024 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-12 06:35:39,028 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:39,028 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:39,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:39,034 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-12 06:35:39,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:39,046 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-12 06:35:39,057 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:35:39,061 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-12 06:35:39,061 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-12 06:35:39,061 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-12 06:35:39,061 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-12 06:35:39,061 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-12 06:35:39,061 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-12 06:35:39,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:39,232 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:39,269 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:39,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:39,274 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:39,310 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:39,317 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d13538b0> has no local changes 2024-04-12 06:35:39,317 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:39,325 [ scc.git] DEBUG [detached HEAD 06f86b1] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:39,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:39,326 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:39,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-12 06:35:40,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-12 06:35:40,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-12 06:35:41,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-12 06:35:41,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:42,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-12 06:35:42,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:42,680 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-12 06:35:43,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-12 06:35:43,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-12 06:35:44,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-12 06:35:44,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:45,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-12 06:35:45,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:45,514 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-12 06:35:45,514 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:45,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-12 06:35:45,515 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:45,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:45,524 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:35:45,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:35:45,531 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:35:45,537 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:35:45,544 [ scc.git] DEBUG Already up to date. 2024-04-12 06:35:45,544 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-12 06:35:46,165 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-12 06:35:46,166 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-12 06:35:46,171 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-12 06:35:46,809 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-12 06:35:46,809 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-12 06:35:46,815 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:35:46,816 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:46,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:46,822 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-12 06:35:46,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:46,836 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-12 06:35:46,872 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-12 06:35:46,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-12 06:35:46,872 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-12 06:35:46,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-12 06:35:46,874 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:35:46,874 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:35:46,882 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-12 06:35:46,890 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-12 06:35:47,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:47,047 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-12 06:35:47,054 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-12 06:35:47,060 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-04-12 06:35:47,065 [ scc.config] DEBUG Found github.token 2024-04-12 06:35:47,065 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-12 06:35:47,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-12 06:35:47,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:47,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-12 06:35:47,127 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-12 06:35:47,127 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-12 06:35:47,127 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-12 06:35:47,127 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:35:47,127 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:35:47,133 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-12 06:35:47,142 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-12 06:35:47,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:35:47,464 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-12 06:35:47,471 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-12 06:35:47,477 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-12 06:35:47,481 [ scc.config] DEBUG Found github.token 2024-04-12 06:35:47,481 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-12 06:35:47,482 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:35:47,519 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:47,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:47,525 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:35:47,565 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:35:47,572 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d0324550> has no local changes 2024-04-12 06:35:47,572 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:35:47,582 [ scc.git] DEBUG [detached HEAD 5765f29] merge master -Dorg -Ssuccess-only 2024-04-12 06:35:47,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:35:47,582 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:35:48,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-12 06:35:48,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-12 06:35:48,582 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:35:49,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-12 06:35:49,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:50,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:50,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-12 06:35:51,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:51,180 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-12 06:35:51,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-12 06:35:51,661 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:35:52,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-12 06:35:52,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:53,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-12 06:35:54,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:54,161 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-12 06:35:54,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-12 06:35:54,641 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-12 06:35:55,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-12 06:35:55,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:35:56,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:35:56,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-12 06:35:57,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:35:57,122 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-12 06:35:57,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-12 06:35:58,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-12 06:35:58,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-12 06:35:58,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-12 06:35:59,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-12 06:35:59,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-12 06:35:59,987 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:35:59,987 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-12 06:35:59,987 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:35:59,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:35:59,994 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:00,001 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:00,001 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:00,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:00,015 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:00,015 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-12 06:36:00,403 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-12 06:36:00,403 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-12 06:36:00,409 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-12 06:36:00,786 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-12 06:36:00,787 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-12 06:36:00,791 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-12 06:36:01,194 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-12 06:36:01,195 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-12 06:36:01,201 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:01,202 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:01,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:01,210 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-12 06:36:01,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:01,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-12 06:36:01,241 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:01,245 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-12 06:36:01,245 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-12 06:36:01,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:01,398 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-12 06:36:01,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:01,410 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-12 06:36:01,470 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-12 06:36:01,471 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:01,474 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-12 06:36:01,474 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-12 06:36:01,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:01,813 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-12 06:36:01,820 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:01,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-12 06:36:01,841 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-12 06:36:01,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:01,845 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-12 06:36:01,845 [ scc.git] DEBUG package.json | 2 +- 2024-04-12 06:36:01,846 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-12 06:36:02,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:02,223 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:02,262 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:02,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:02,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:02,307 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:02,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d1350fd0> has no local changes 2024-04-12 06:36:02,314 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:02,322 [ scc.git] DEBUG [detached HEAD 3246dac] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:02,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:02,323 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:02,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-12 06:36:03,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-12 06:36:03,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-12 06:36:04,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:04,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-12 06:36:05,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:05,109 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-12 06:36:05,110 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:05,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-12 06:36:05,110 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:05,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:05,117 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:05,122 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:05,122 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:05,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:05,135 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:05,135 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-12 06:36:05,517 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-12 06:36:05,518 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-12 06:36:05,522 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:05,522 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:05,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:05,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-12 06:36:05,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:05,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-12 06:36:05,550 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:05,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:05,718 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:05,760 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:05,760 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:05,767 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:05,807 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:05,815 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d02ee340> has no local changes 2024-04-12 06:36:05,816 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:05,825 [ scc.git] DEBUG [detached HEAD 465396a] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:05,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:05,825 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:06,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-12 06:36:06,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-12 06:36:07,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-12 06:36:07,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-12 06:36:08,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-12 06:36:08,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:09,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-12 06:36:09,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:09,587 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-12 06:36:09,587 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:09,587 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-12 06:36:09,587 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:09,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:09,594 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:09,601 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:09,601 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:09,610 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:09,617 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:09,617 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-12 06:36:10,260 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-12 06:36:10,260 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-12 06:36:10,265 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:10,266 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:10,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:10,272 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-12 06:36:10,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:10,286 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-12 06:36:10,296 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-12 06:36:10,297 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:10,299 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-12 06:36:10,299 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-12 06:36:10,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:10,465 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:10,516 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:10,516 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:10,529 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:10,579 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:10,588 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d033b5b0> has no local changes 2024-04-12 06:36:10,588 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:10,598 [ scc.git] DEBUG [detached HEAD 2ddc8a8] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:10,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:10,599 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:10,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-12 06:36:11,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-12 06:36:11,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-12 06:36:12,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-12 06:36:13,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:13,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-12 06:36:13,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:13,881 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-12 06:36:13,881 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:13,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-12 06:36:13,881 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:13,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:13,887 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:13,892 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:13,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:13,899 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:13,905 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:13,905 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-12 06:36:14,321 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-12 06:36:14,321 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-12 06:36:14,330 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:14,330 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:14,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:14,339 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-12 06:36:14,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:14,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-12 06:36:14,413 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG Auto-merging setup.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-12 06:36:14,413 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:36:14,414 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:36:14,421 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-12 06:36:14,428 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-12 06:36:14,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:14,585 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-12 06:36:14,592 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-12 06:36:14,599 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - setup.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2024-04-12 06:36:14,604 [ scc.config] DEBUG Found github.token 2024-04-12 06:36:14,605 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-12 06:36:14,605 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:14,680 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:14,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:14,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:14,729 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:14,736 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d1382e80> has no local changes 2024-04-12 06:36:14,736 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:14,747 [ scc.git] DEBUG [detached HEAD 9a7c46f] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:14,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:14,748 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:15,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-12 06:36:15,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-12 06:36:16,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-12 06:36:16,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-12 06:36:17,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:17,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-12 06:36:18,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:18,002 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-12 06:36:18,003 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:18,003 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-12 06:36:18,003 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:18,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:18,010 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:18,015 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:18,015 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:18,021 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:18,028 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:18,028 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-12 06:36:18,460 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-12 06:36:18,461 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-12 06:36:18,465 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:18,465 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:18,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:18,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-12 06:36:18,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:18,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-12 06:36:18,500 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-12 06:36:18,503 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-12 06:36:18,503 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-12 06:36:18,503 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-12 06:36:18,503 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-12 06:36:18,504 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-12 06:36:18,505 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-12 06:36:18,505 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-12 06:36:18,505 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-12 06:36:18,506 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-12 06:36:18,506 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-12 06:36:18,506 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-12 06:36:18,507 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-12 06:36:18,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:18,652 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:18,692 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:18,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:18,697 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:18,741 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:18,752 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d1350df0> has no local changes 2024-04-12 06:36:18,752 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:18,779 [ scc.git] DEBUG [detached HEAD e0a1846] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:18,780 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:18,780 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:19,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-12 06:36:19,087 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:19,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-12 06:36:19,087 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,095 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:19,102 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:19,102 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:19,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:19,117 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:19,117 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:19,117 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,124 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:19,173 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,180 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:19,229 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:19,241 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d0320fa0> has no local changes 2024-04-12 06:36:19,241 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:19,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:19,253 [ scc.git] DEBUG [detached HEAD be0e9c8] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:19,254 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:19,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-12 06:36:19,518 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:19,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-12 06:36:19,518 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,525 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:19,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:19,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:19,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:19,546 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:19,547 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:19,547 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,555 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:19,619 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:19,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:19,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:19,691 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:19,699 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d02e5f70> has no local changes 2024-04-12 06:36:19,699 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:19,709 [ scc.git] DEBUG [detached HEAD 03ac720] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:19,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:19,710 [ scc.git] INFO Overriding base-branch from master to main 2024-04-12 06:36:19,710 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:20,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-12 06:36:20,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-12 06:36:20,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-12 06:36:21,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-12 06:36:21,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-12 06:36:22,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:22,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-12 06:36:23,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-12 06:36:23,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:23,852 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-12 06:36:23,853 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:23,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-12 06:36:23,853 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:23,853 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:23,863 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-12 06:36:23,869 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:23,869 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-12 06:36:23,874 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-12 06:36:23,882 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:23,882 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-12 06:36:24,301 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-12 06:36:24,302 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-12 06:36:24,307 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:24,308 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:24,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:24,314 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-12 06:36:24,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:24,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-12 06:36:24,347 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-12 06:36:24,348 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-12 06:36:24,348 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:36:24,348 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:36:24,355 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-12 06:36:24,362 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-12 06:36:24,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:24,552 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-12 06:36:24,559 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-12 06:36:24,565 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-12 06:36:24,570 [ scc.config] DEBUG Found github.token 2024-04-12 06:36:24,571 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-12 06:36:24,571 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:24,613 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:24,613 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:24,620 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:24,665 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:24,672 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d029d430> has no local changes 2024-04-12 06:36:24,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:24,682 [ scc.git] DEBUG [detached HEAD d5ad723] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:24,682 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:24,682 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:24,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-12 06:36:24,984 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:24,984 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-12 06:36:24,984 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:24,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:24,992 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:25,000 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:25,000 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:25,008 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:25,016 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:25,017 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:25,017 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:25,017 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:25,026 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:25,080 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:25,080 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:25,088 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:25,146 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:25,154 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d02d2e50> has no local changes 2024-04-12 06:36:25,154 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:25,165 [ scc.git] DEBUG [detached HEAD 02901c7] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:25,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:25,166 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:25,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-12 06:36:25,422 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:25,422 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-12 06:36:25,422 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:25,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:25,430 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:25,438 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:25,439 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:25,450 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:25,463 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:25,463 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:25,464 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:25,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:25,476 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:25,549 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:25,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:25,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:25,623 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:25,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d020f940> has no local changes 2024-04-12 06:36:25,638 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:25,659 [ scc.git] DEBUG [detached HEAD 4f646df] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:25,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:25,659 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:25,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-12 06:36:26,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-12 06:36:26,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-12 06:36:27,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-12 06:36:27,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:28,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-12 06:36:28,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:28,731 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-12 06:36:28,731 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:28,731 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-12 06:36:28,732 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:28,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:28,745 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-12 06:36:28,755 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:28,757 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-12 06:36:28,767 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-12 06:36:28,774 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:28,775 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-12 06:36:29,221 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-12 06:36:29,221 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-12 06:36:29,227 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:29,227 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:29,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:29,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-12 06:36:29,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:29,245 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-12 06:36:29,314 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-12 06:36:29,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-12 06:36:29,314 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:36:29,315 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:36:29,323 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-12 06:36:29,332 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-12 06:36:29,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:29,497 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-12 06:36:29,505 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-12 06:36:29,513 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-12 06:36:29,521 [ scc.config] DEBUG Found github.token 2024-04-12 06:36:29,521 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-12 06:36:29,522 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:29,571 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:29,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:29,581 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:29,635 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:29,644 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d026e6a0> has no local changes 2024-04-12 06:36:29,644 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:29,654 [ scc.git] DEBUG [detached HEAD c84308d] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:29,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:29,655 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-12 06:36:29,655 [ scc.repo] DEBUG ## PRs found: 2024-04-12 06:36:30,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-12 06:36:30,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-12 06:36:30,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-12 06:36:31,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-12 06:36:31,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-12 06:36:32,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-12 06:36:32,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-12 06:36:33,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-12 06:36:33,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-12 06:36:34,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-12 06:36:34,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-12 06:36:34,559 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-12 06:36:35,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-12 06:36:35,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-12 06:36:36,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-12 06:36:36,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-12 06:36:36,488 [ scc.repo] DEBUG ## Branches found: 2024-04-12 06:36:36,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-12 06:36:36,488 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:36,488 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:36,495 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-12 06:36:36,500 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-12 06:36:36,500 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-12 06:36:36,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-12 06:36:36,512 [ scc.git] DEBUG Already up to date. 2024-04-12 06:36:36,513 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-12 06:36:36,939 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-12 06:36:36,939 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-12 06:36:36,944 [ scc.git] DEBUG ## Unique users: [] 2024-04-12 06:36:36,945 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:36,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:36,951 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-12 06:36:36,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:36,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-12 06:36:37,006 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-12 06:36:37,007 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-12 06:36:37,007 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-12 06:36:37,008 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-12 06:36:37,020 [ scc.git] DEBUG Calling 'git reset --hard 2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-12 06:36:37,034 [ scc.git] DEBUG HEAD is now at 2078ac7 Bump version: 5.8.0 → 5.8.1.dev0 2024-04-12 06:36:37,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:37,203 [ scc.git] DEBUG Calling 'git merge-base 2078ac72dbf11f2733e685000a274eff81c2ac2d 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-12 06:36:37,211 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..2078ac72dbf11f2733e685000a274eff81c2ac2d' 2024-04-12 06:36:37,218 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#29](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-12 06:36:37,224 [ scc.config] DEBUG Found github.token 2024-04-12 06:36:37,224 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-12 06:36:37,224 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-12 06:36:37,269 [ scc.git] DEBUG Get sha1 of %s 2024-04-12 06:36:37,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-12 06:36:37,276 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:37,316 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:37,323 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d020fbb0> has no local changes 2024-04-12 06:36:37,323 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:37,332 [ scc.git] DEBUG [detached HEAD 3df2698] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:37,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:37,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-12 06:36:37,427 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-12 06:36:37,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:37,640 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-12 06:36:37,647 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-12 06:36:38,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:38,097 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-12 06:36:38,102 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-12 06:36:38,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:38,506 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-12 06:36:38,513 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-12 06:36:38,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:38,931 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-12 06:36:39,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:39,329 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-12 06:36:39,335 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-12 06:36:39,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:39,747 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-12 06:36:39,753 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-12 06:36:40,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:40,158 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-12 06:36:40,166 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-12 06:36:40,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:40,595 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-12 06:36:40,600 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-12 06:36:40,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:40,996 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-12 06:36:41,002 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-12 06:36:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:41,401 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-12 06:36:41,406 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-12 06:36:41,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:41,797 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-12 06:36:41,802 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-12 06:36:42,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:42,202 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-12 06:36:42,208 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-12 06:36:42,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:42,616 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-12 06:36:43,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:43,028 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-12 06:36:43,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:43,429 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-12 06:36:43,434 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-12 06:36:43,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:43,839 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-12 06:36:44,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:44,240 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-12 06:36:44,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:44,655 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-12 06:36:44,661 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-12 06:36:45,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:45,095 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-12 06:36:45,101 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-12 06:36:45,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:45,507 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-12 06:36:45,511 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-12 06:36:45,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:45,955 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-12 06:36:45,959 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-12 06:36:46,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-12 06:36:46,355 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-12 06:36:46,356 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-12 06:36:46,436 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f59d481f460> has local changes 2024-04-12 06:36:46,437 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 477 will-moore 'Vite' - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' - PR 550 will-moore 'Don't update zoom to undefined on setId' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 456 will-moore 'Don't use tiles for non-big movies' - PR 460 will-moore 'Channel min spinner fix' - PR 464 will-moore 'Tile load error warning' - PR 465 will-moore 'Save as Figure' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#29 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/29/)' 2024-04-12 06:36:46,451 [ scc.git] DEBUG [detached HEAD 9558cb5] merge master -Dorg -Ssuccess-only 2024-04-12 06:36:46,452 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-12 06:36:46,452 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-12 06:36:46,452 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 359 dependabot[bot] 'Bump omero-figure from `3b7ccfa` to `852b510`' 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 360 dependabot[bot] 'Bump omero-iviewer from `a232ed0` to `9d8d147`' 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-12 06:36:46,452 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-12 06:36:46,452 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-12 06:36:46,452 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-12 06:36:46,452 [ scc.merge] INFO 2024-04-12 06:36:46,452 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-12 06:36:46,452 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-12 06:36:46,452 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-12 06:36:46,452 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-12 06:36:46,453 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-12 06:36:46,453 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-12 06:36:46,453 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-12 06:36:46,453 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 548 will-moore 'Fix cropping of panel labels and float usage for shape labels' 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 550 will-moore 'Don't update zoom to undefined on setId' 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-12 06:36:46,453 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-12 06:36:46,453 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,453 [ scc.merge] INFO 2024-04-12 06:36:46,453 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,453 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-12 06:36:46,454 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 456 will-moore 'Don't use tiles for non-big movies' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 464 will-moore 'Tile load error warning' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-12 06:36:46,454 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-12 06:36:46,454 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-12 06:36:46,454 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-12 06:36:46,454 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,454 [ scc.merge] INFO 2024-04-12 06:36:46,454 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-12 06:36:46,454 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-12 06:36:46,455 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Merged PRs: 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,455 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-12 06:36:46,455 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,455 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-12 06:36:46,455 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,455 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-12 06:36:46,456 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-12 06:36:46,456 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-12 06:36:46,456 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Repository: ome/scripts 2024-04-12 06:36:46,456 [ scc.merge] INFO Excluded PRs: 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-12 06:36:46,456 [ scc.merge] INFO Already up to date. 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-12 06:36:46,456 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-12 06:36:46,456 [ scc.merge] INFO 2024-04-12 06:36:46,456 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-12 06:36:46,456 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-12 06:36:46,463 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-12 06:36:46,469 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-12 06:36:46,475 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-12 06:36:46,481 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-12 06:36:46,487 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-12 06:36:46,492 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-12 06:36:46,499 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,505 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-12 06:36:46,505 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-12 06:36:46,510 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-12 06:36:46,516 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-12 06:36:46,521 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-12 06:36:46,527 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-12 06:36:46,532 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-12 06:36:46,539 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-12 06:36:46,547 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-12 06:36:46,555 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-12 06:36:46,565 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-12 06:36:46,575 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-12 06:36:46,594 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-12 06:36:46,602 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-12 06:36:46,607 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-12 06:36:46,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-12 06:36:46,613 [ scc.git] DEBUG Calling 'git remote' 2024-04-12 06:36:46,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD ea9a008] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 852b5109 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 2078ac7 nothing to commit, working tree clean [detached HEAD 69715ad] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-12 06:37:33,218 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-12 06:37:42,267 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-12 06:37:44,629 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-12 06:37:49,279 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-12 06:38:37,173 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS