![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 324 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 284 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.15-py2.py3-none-any.whl.metadata (5.5 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.12.14-py3-none-any.whl.metadata (2.3 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.15-py2.py3-none-any.whl (9.9 kB) Using cached certifi-2024.12.14-py3-none-any.whl (164 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (146 kB) Using cached cryptography-44.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (82 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.15 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.12.14 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.0 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.17.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-12-29 00:42:33,464 [ scc.config] DEBUG Found github.token 2024-12-29 00:42:33,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-29 00:42:33,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:42:34,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:42:34,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-29 00:42:34,445 [ scc.gh] DEBUG 4108 remaining from 5000 (Reset at 00:12 2024-12-29 00:42:34,446 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:34,452 [ scc.git] DEBUG Check current status 2024-12-29 00:42:34,452 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:34,456 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-29 00:42:34,456 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:34,507 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-29 00:42:34,623 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-29 00:42:35,109 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-29 00:42:35,229 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-29 00:42:35,234 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-29 00:42:35,349 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-29 00:42:35,520 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-29 00:42:35,524 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-29 00:42:35,527 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-29 00:42:35,530 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-29 00:42:35,532 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-29 00:42:35,661 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-29 00:42:35,665 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-29 00:42:35,669 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-29 00:42:35,672 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-29 00:42:35,676 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-29 00:42:35,678 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-29 00:42:35,803 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-29 00:42:35,807 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-29 00:42:35,810 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-29 00:42:35,814 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-29 00:42:35,818 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-29 00:42:35,823 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:36,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-29 00:42:36,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:42:36,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:42:37,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:42:37,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:42:37,753 [ scc.git] DEBUG Resetting... 2024-12-29 00:42:37,753 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-29 00:42:37,762 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-29 00:42:37,762 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-29 00:42:37,862 [ scc.git] DEBUG Check current status 2024-12-29 00:42:37,863 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:37,867 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2024-12-29 00:42:37,867 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:37,914 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-29 00:42:37,917 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-29 00:42:37,920 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-29 00:42:37,923 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-29 00:42:37,927 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-29 00:42:37,930 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-29 00:42:37,933 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-29 00:42:37,936 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-29 00:42:37,939 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-29 00:42:37,942 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-29 00:42:37,945 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-29 00:42:37,948 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-29 00:42:37,951 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-29 00:42:37,954 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-29 00:42:37,957 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-29 00:42:37,961 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-29 00:42:37,964 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-29 00:42:37,966 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-29 00:42:37,969 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-29 00:42:37,972 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-29 00:42:37,976 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-29 00:42:37,979 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2024-12-29 00:42:37,980 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-29 00:42:37,980 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-29 00:42:37,980 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-29 00:42:37,981 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-29 00:42:37,981 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-29 00:42:37,981 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:42:38,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-29 00:42:38,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-29 00:42:38,726 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:42:38,727 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-29 00:42:38,727 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:42:38,727 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:42:38,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:42:38,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:42:38,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:42:38,735 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:42:38,739 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:42:38,743 [ scc.git] DEBUG Already up to date. 2024-12-29 00:42:38,743 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-29 00:42:39,067 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-29 00:42:39,068 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-29 00:42:39,076 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:42:39,076 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:42:39,076 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:42:39,081 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-29 00:42:39,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:42:39,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-29 00:42:39,108 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:42:39,111 [ scc.git] DEBUG scripts | 2 +- 2024-12-29 00:42:39,111 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-12-29 00:42:39,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:42:39,277 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:42:39,345 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-29 00:42:39,346 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:42:39,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:42:39,351 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:42:41,627 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f05c8765370> has no local changes 2024-12-29 00:42:41,627 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:42:41,705 [ scc.git] DEBUG [detached HEAD ac3b340] merge master -Dorg -Snone 2024-12-29 00:42:41,705 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-29 00:42:41,705 [ scc.merge] INFO Already up to date. 2024-12-29 00:42:41,705 [ scc.merge] INFO 2024-12-29 00:42:41,705 [ scc.merge] INFO Merged PRs: 2024-12-29 00:42:41,705 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-29 00:42:41,705 [ scc.merge] INFO 2024-12-29 00:42:41,705 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-29 00:42:41,705 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-12-29 00:42:49,701 [ scc.config] DEBUG Found github.token 2024-12-29 00:42:49,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-12-29 00:42:49,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:42:50,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:42:50,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-12-29 00:42:50,660 [ scc.gh] DEBUG 4098 remaining from 5000 (Reset at 00:12 2024-12-29 00:42:50,661 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:50,665 [ scc.git] DEBUG Check current status 2024-12-29 00:42:50,665 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:50,669 [ scc.git] DEBUG ac3b340 merge master -Dorg -Snone 2024-12-29 00:42:50,669 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:50,718 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-29 00:42:50,721 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-29 00:42:50,725 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-29 00:42:50,729 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-29 00:42:50,732 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-29 00:42:50,735 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-29 00:42:50,738 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-29 00:42:50,742 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-29 00:42:50,746 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-29 00:42:50,750 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-29 00:42:50,761 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-29 00:42:50,766 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-29 00:42:50,772 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-29 00:42:50,777 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-29 00:42:50,782 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-29 00:42:50,785 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-29 00:42:50,788 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-29 00:42:50,790 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-29 00:42:50,793 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-29 00:42:50,796 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-29 00:42:50,799 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-29 00:42:50,802 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-29 00:42:50,808 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:50,808 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-12-29 00:42:50,810 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-12-29 00:42:51,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-12-29 00:42:51,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:42:51,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:42:52,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:42:52,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:42:52,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:42:52,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-29 00:42:52,898 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:52,902 [ scc.git] DEBUG Check current status 2024-12-29 00:42:52,903 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:52,907 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2024-12-29 00:42:52,907 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:52,953 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:53,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-12-29 00:42:53,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:42:54,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:42:54,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:42:54,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:42:54,975 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:42:55,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:42:55,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-29 00:42:55,014 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:55,018 [ scc.git] DEBUG Check current status 2024-12-29 00:42:55,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:55,022 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2024-12-29 00:42:55,022 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:55,064 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:55,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-12-29 00:42:55,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:42:56,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:42:56,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:42:57,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:42:57,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:42:57,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:42:57,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-29 00:42:57,289 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:57,293 [ scc.git] DEBUG Check current status 2024-12-29 00:42:57,293 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:57,297 [ scc.git] DEBUG ce6e13c Merge pull request #62 from dominikl/export 2024-12-29 00:42:57,297 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:57,345 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:57,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-12-29 00:42:58,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:42:58,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:42:58,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:42:59,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:42:59,370 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:42:59,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:42:59,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-29 00:42:59,415 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:42:59,419 [ scc.git] DEBUG Check current status 2024-12-29 00:42:59,420 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:42:59,424 [ scc.git] DEBUG 11d3587 Merge pull request #165 from jburel/build 2024-12-29 00:42:59,424 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:42:59,468 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:42:59,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-12-29 00:43:00,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:00,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:01,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:01,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:01,582 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:01,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:01,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-29 00:43:01,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:01,630 [ scc.git] DEBUG Check current status 2024-12-29 00:43:01,631 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:01,637 [ scc.git] DEBUG fb316a7e Bump version: 7.2.0 → 7.2.1.dev0 2024-12-29 00:43:01,638 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:01,683 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:02,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-12-29 00:43:02,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:03,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:03,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:03,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:03,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:03,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:03,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-29 00:43:03,871 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:03,876 [ scc.git] DEBUG Check current status 2024-12-29 00:43:03,876 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:03,880 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2024-12-29 00:43:03,880 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:03,927 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:04,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-12-29 00:43:04,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:05,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:05,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:06,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:06,068 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:06,107 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:06,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-29 00:43:06,108 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:06,112 [ scc.git] DEBUG Check current status 2024-12-29 00:43:06,112 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:06,116 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2024-12-29 00:43:06,116 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:06,158 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:06,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-12-29 00:43:07,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:07,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:07,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:08,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:08,330 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:08,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:08,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-29 00:43:08,374 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:08,378 [ scc.git] DEBUG Check current status 2024-12-29 00:43:08,379 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:08,383 [ scc.git] DEBUG b4102d4 add dev 2024-12-29 00:43:08,384 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:08,429 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:08,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-12-29 00:43:09,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:09,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:10,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:10,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:10,466 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:10,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:10,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-29 00:43:10,509 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:10,513 [ scc.git] DEBUG Check current status 2024-12-29 00:43:10,513 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:10,518 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2024-12-29 00:43:10,518 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:10,560 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:10,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-12-29 00:43:11,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:11,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:12,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:12,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:12,636 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:12,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:12,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-29 00:43:12,676 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:12,680 [ scc.git] DEBUG Check current status 2024-12-29 00:43:12,680 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:12,684 [ scc.git] DEBUG 3cd120c Merge pull request #89 from jburel/build 2024-12-29 00:43:12,685 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:12,726 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:13,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-12-29 00:43:13,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:13,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:14,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:14,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:14,798 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:14,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:14,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-29 00:43:14,841 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:14,845 [ scc.git] DEBUG Check current status 2024-12-29 00:43:14,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:14,850 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2024-12-29 00:43:14,850 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:14,891 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:15,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-12-29 00:43:16,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:16,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:17,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:17,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:17,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:17,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:17,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-29 00:43:17,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:17,768 [ scc.git] DEBUG Check current status 2024-12-29 00:43:17,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:17,772 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2024-12-29 00:43:17,773 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:17,821 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:18,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-12-29 00:43:18,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:19,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:19,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:19,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:19,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:19,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:19,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-29 00:43:19,943 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:19,948 [ scc.git] DEBUG Check current status 2024-12-29 00:43:19,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:19,952 [ scc.git] DEBUG bdfeb5e bump sphinx version 2024-12-29 00:43:19,952 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:19,997 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:20,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-12-29 00:43:20,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:21,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:21,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:22,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:22,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:22,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:22,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-29 00:43:22,098 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:22,103 [ scc.git] DEBUG Check current status 2024-12-29 00:43:22,103 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:22,108 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2024-12-29 00:43:22,108 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:22,152 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:22,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-12-29 00:43:22,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:23,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:23,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:24,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:24,206 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:24,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:24,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-29 00:43:24,253 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:24,258 [ scc.git] DEBUG Check current status 2024-12-29 00:43:24,258 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:24,264 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-12-29 00:43:24,265 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:24,311 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:24,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-29 00:43:24,623 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-29 00:43:24,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-12-29 00:43:25,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:25,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:26,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:26,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:26,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:26,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:26,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-29 00:43:26,639 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:26,645 [ scc.git] DEBUG Check current status 2024-12-29 00:43:26,645 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:26,649 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2024-12-29 00:43:26,650 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:26,697 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:27,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-12-29 00:43:27,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:27,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:28,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:28,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:28,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:28,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:28,816 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-29 00:43:28,816 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:28,821 [ scc.git] DEBUG Check current status 2024-12-29 00:43:28,821 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:28,826 [ scc.git] DEBUG deab817 update setup-python to v4 2024-12-29 00:43:28,826 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:28,873 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:29,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-12-29 00:43:29,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:30,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:30,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:30,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:30,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:30,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:30,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-29 00:43:30,970 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:30,975 [ scc.git] DEBUG Check current status 2024-12-29 00:43:30,975 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:30,979 [ scc.git] DEBUG 8f3c313 Merge pull request #17 from jburel/build 2024-12-29 00:43:30,980 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:31,027 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:31,028 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-12-29 00:43:31,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-12-29 00:43:31,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:32,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:32,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:33,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:33,096 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:33,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:33,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-29 00:43:33,141 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:33,147 [ scc.git] DEBUG Check current status 2024-12-29 00:43:33,147 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:33,152 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2024-12-29 00:43:33,152 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:33,201 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:33,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-29 00:43:33,514 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-29 00:43:33,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-12-29 00:43:34,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:34,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:35,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:35,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:35,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:35,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:35,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-29 00:43:35,544 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:35,549 [ scc.git] DEBUG Check current status 2024-12-29 00:43:35,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:35,555 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2024-12-29 00:43:35,555 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:35,603 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:35,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-29 00:43:35,912 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-29 00:43:36,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-12-29 00:43:36,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:36,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:37,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:37,815 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:37,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:37,856 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-29 00:43:37,856 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:37,862 [ scc.git] DEBUG Check current status 2024-12-29 00:43:37,862 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:37,867 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-29 00:43:37,868 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:37,915 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:38,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-12-29 00:43:38,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:39,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:39,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:39,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:39,971 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:40,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:40,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-29 00:43:40,011 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-12-29 00:43:40,016 [ scc.git] DEBUG Check current status 2024-12-29 00:43:40,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:40,025 [ scc.git] DEBUG 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-29 00:43:40,025 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:40,069 [ scc.config] DEBUG Found remote.origin.url 2024-12-29 00:43:40,070 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-12-29 00:43:40,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-29 00:43:40,404 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-29 00:43:40,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-12-29 00:43:41,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-12-29 00:43:41,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-12-29 00:43:41,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-12-29 00:43:42,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-12-29 00:43:42,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:42,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:42,308 [ scc.git] DEBUG Resetting... 2024-12-29 00:43:42,308 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-12-29 00:43:42,319 [ scc.git] DEBUG HEAD is now at ac3b340 merge master -Dorg -Snone 2024-12-29 00:43:42,319 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-12-29 00:43:42,420 [ scc.git] DEBUG Check current status 2024-12-29 00:43:42,420 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-12-29 00:43:42,426 [ scc.git] DEBUG ac3b340 merge master -Dorg -Snone 2024-12-29 00:43:42,426 [ scc.git] DEBUG Calling 'git submodule status' 2024-12-29 00:43:42,473 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (remotes/origin/HEAD) 2024-12-29 00:43:42,476 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2024-12-29 00:43:42,479 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2024-12-29 00:43:42,482 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2024-12-29 00:43:42,485 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2024-12-29 00:43:42,489 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2024-12-29 00:43:42,492 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2024-12-29 00:43:42,495 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2024-12-29 00:43:42,498 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2024-12-29 00:43:42,501 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2024-12-29 00:43:42,504 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2024-12-29 00:43:42,507 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2024-12-29 00:43:42,510 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2024-12-29 00:43:42,513 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2024-12-29 00:43:42,516 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-12-29 00:43:42,519 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2024-12-29 00:43:42,522 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-12-29 00:43:42,524 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2024-12-29 00:43:42,528 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2024-12-29 00:43:42,531 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2024-12-29 00:43:42,534 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-12-29 00:43:42,538 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2024-12-29 00:43:42,539 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-12-29 00:43:42,539 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-12-29 00:43:42,539 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-12-29 00:43:42,539 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-12-29 00:43:42,539 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-12-29 00:43:42,539 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-12-29 00:43:42,539 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:43:42,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-12-29 00:43:43,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2024-12-29 00:43:43,284 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:43:43,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-29 00:43:44,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:43:44,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2024-12-29 00:43:45,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:43:45,199 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-29 00:43:45,199 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:43:45,199 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:45,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:45,205 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:43:45,210 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:43:45,210 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:43:45,216 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:43:45,222 [ scc.git] DEBUG Already up to date. 2024-12-29 00:43:45,223 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2024-12-29 00:43:45,561 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-12-29 00:43:45,561 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2024-12-29 00:43:45,568 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:43:45,568 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:45,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:45,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-29 00:43:45,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:45,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2024-12-29 00:43:45,592 [ scc.git] DEBUG Already up to date. 2024-12-29 00:43:45,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:43:45,731 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:43:45,787 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:45,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:45,792 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:43:46,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-12-29 00:43:46,168 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:43:46,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-29 00:43:46,169 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:46,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:46,174 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:43:46,180 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:43:46,180 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:43:46,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:43:46,192 [ scc.git] DEBUG Already up to date. 2024-12-29 00:43:46,192 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:43:46,192 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:46,193 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:46,198 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:43:46,241 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:46,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:46,246 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:46,290 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:43:46,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22cb1f3490> has no local changes 2024-12-29 00:43:46,298 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:43:46,307 [ scc.git] DEBUG [detached HEAD d3e60e2] merge master -Dorg -Ssuccess-only 2024-12-29 00:43:46,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:46,307 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:43:46,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-12-29 00:43:47,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-12-29 00:43:47,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-12-29 00:43:47,568 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:43:47,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-29 00:43:47,568 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:47,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:47,574 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:43:47,579 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:43:47,579 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:43:47,584 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:43:47,590 [ scc.git] DEBUG Already up to date. 2024-12-29 00:43:47,590 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:43:47,590 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:47,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:47,594 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:43:47,634 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:47,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:47,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:47,681 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:43:47,688 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22cb1f32e0> has no local changes 2024-12-29 00:43:47,688 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:43:47,696 [ scc.git] DEBUG [detached HEAD 27296e5] merge master -Dorg -Ssuccess-only 2024-12-29 00:43:47,696 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:47,697 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:43:48,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-12-29 00:43:48,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-12-29 00:43:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-12-29 00:43:49,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-29 00:43:49,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:43:50,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:43:50,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/75fc40970592eca2babd405b65a372f328fb679a HTTP/1.1" 200 None 2024-12-29 00:43:51,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/75fc40970592eca2babd405b65a372f328fb679a?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:43:51,383 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-12-29 00:43:51,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-12-29 00:43:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-12-29 00:43:52,298 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:43:52,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-29 00:43:52,298 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:52,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:52,304 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:43:52,310 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:43:52,310 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:43:52,316 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:43:52,322 [ scc.git] DEBUG Already up to date. 2024-12-29 00:43:52,322 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-12-29 00:43:53,099 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-12-29 00:43:53,099 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-12-29 00:43:53,104 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:43:53,105 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:53,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:53,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...75fc40970592eca2babd405b65a372f328fb679a' 2024-12-29 00:43:53,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:53,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 75fc40970592eca2babd405b65a372f328fb679a' 2024-12-29 00:43:53,154 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:43:53,157 [ scc.git] DEBUG src/omero_cli_render.py | 159 +++++++++++++++++++++++++++--------------------- 2024-12-29 00:43:53,157 [ scc.git] DEBUG 1 file changed, 89 insertions(+), 70 deletions(-) 2024-12-29 00:43:53,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:43:53,296 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:43:53,339 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:43:53,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:43:53,346 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:43:53,390 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:43:53,397 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22cbe86070> has no local changes 2024-12-29 00:43:53,397 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:43:53,406 [ scc.git] DEBUG [detached HEAD a73889b] merge master -Dorg -Ssuccess-only 2024-12-29 00:43:53,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:43:53,407 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:43:53,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-12-29 00:43:54,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2024-12-29 00:43:54,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-12-29 00:43:55,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-12-29 00:43:55,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-29 00:43:56,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:43:56,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:43:57,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-29 00:43:57,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-12-29 00:43:58,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-12-29 00:43:58,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-12-29 00:43:58,594 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-12-29 00:43:59,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-12-29 00:43:59,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-12-29 00:44:00,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-12-29 00:44:00,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-29 00:44:01,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:01,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-12-29 00:44:02,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:02,052 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-29 00:44:02,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-12-29 00:44:03,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-12-29 00:44:03,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-29 00:44:04,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:04,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-12-29 00:44:04,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:04,920 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-12-29 00:44:04,920 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:44:04,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-29 00:44:04,921 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:04,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:04,928 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:44:04,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:44:04,934 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:44:04,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:44:04,947 [ scc.git] DEBUG Already up to date. 2024-12-29 00:44:04,948 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-12-29 00:44:05,411 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-29 00:44:05,411 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-12-29 00:44:05,416 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-12-29 00:44:05,838 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-29 00:44:05,839 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-12-29 00:44:05,844 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-12-29 00:44:06,178 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-12-29 00:44:06,179 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-12-29 00:44:06,183 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:44:06,184 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:06,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:06,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-29 00:44:06,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:06,205 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-29 00:44:06,306 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-29 00:44:06,306 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-29 00:44:06,306 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-29 00:44:06,306 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:44:06,307 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:44:06,314 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-29 00:44:06,321 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-29 00:44:06,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:06,464 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-12-29 00:44:06,473 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-29 00:44:06,479 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-12-29 00:44:06,484 [ scc.config] DEBUG Found github.token 2024-12-29 00:44:06,485 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-12-29 00:44:06,485 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-29 00:44:06,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:06,498 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-29 00:44:06,558 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-12-29 00:44:06,559 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-12-29 00:44:06,559 [ scc.git] DEBUG Auto-merging setup.py 2024-12-29 00:44:06,559 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-12-29 00:44:06,559 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-29 00:44:06,559 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-12-29 00:44:06,559 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-12-29 00:44:06,559 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:44:06,559 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:44:06,565 [ scc.git] DEBUG Calling 'git reset --hard 11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-29 00:44:06,572 [ scc.git] DEBUG HEAD is now at 11d3587 Merge pull request #165 from jburel/build 2024-12-29 00:44:06,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:06,878 [ scc.git] DEBUG Calling 'git merge-base 11d35873542022d9638ede115d0dfab4652f8e62 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-12-29 00:44:06,885 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..11d35873542022d9638ede115d0dfab4652f8e62' 2024-12-29 00:44:06,892 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-12-29 00:44:06,897 [ scc.config] DEBUG Found github.token 2024-12-29 00:44:06,897 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-12-29 00:44:06,898 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-29 00:44:06,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:06,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-12-29 00:44:06,924 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-12-29 00:44:06,924 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-12-29 00:44:06,925 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:06,928 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-12-29 00:44:06,928 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-12-29 00:44:06,928 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-12-29 00:44:06,928 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-12-29 00:44:06,929 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-12-29 00:44:06,929 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-12-29 00:44:07,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:07,271 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:44:07,315 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:07,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:07,321 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:44:07,362 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:44:07,369 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22ca12d4f0> has no local changes 2024-12-29 00:44:07,370 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:44:07,380 [ scc.git] DEBUG [detached HEAD 7e54c7c] merge master -Dorg -Ssuccess-only 2024-12-29 00:44:07,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:44:07,380 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:44:07,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-12-29 00:44:08,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/605 HTTP/1.1" 200 None 2024-12-29 00:44:08,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600 HTTP/1.1" 200 None 2024-12-29 00:44:09,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/600/comments HTTP/1.1" 200 None 2024-12-29 00:44:09,253 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:44:09,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-29 00:44:09,253 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:09,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:09,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:44:09,264 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:44:09,265 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:44:09,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:44:09,276 [ scc.git] DEBUG Already up to date. 2024-12-29 00:44:09,276 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:44:09,276 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:09,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:09,281 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:44:09,325 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:09,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:09,331 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:44:09,371 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:44:09,379 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22ca122580> has no local changes 2024-12-29 00:44:09,379 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:44:09,391 [ scc.git] DEBUG [detached HEAD a2540256] merge master -Dorg -Ssuccess-only 2024-12-29 00:44:09,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:44:09,392 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:44:09,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-12-29 00:44:10,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-12-29 00:44:10,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-12-29 00:44:11,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-29 00:44:11,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:12,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-12-29 00:44:12,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:12,593 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-12-29 00:44:12,593 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:44:12,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-29 00:44:12,593 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:12,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:12,599 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:44:12,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:44:12,604 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:44:12,610 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:44:12,617 [ scc.git] DEBUG Already up to date. 2024-12-29 00:44:12,617 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-12-29 00:44:13,003 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-12-29 00:44:13,003 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-12-29 00:44:13,007 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:44:13,007 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:13,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:13,014 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-29 00:44:13,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:13,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-12-29 00:44:13,203 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-12-29 00:44:13,203 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:13,206 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-12-29 00:44:13,206 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-12-29 00:44:13,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:13,346 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:44:13,390 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:13,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:13,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:44:13,438 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:44:13,445 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22ca1119a0> has no local changes 2024-12-29 00:44:13,445 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:44:13,454 [ scc.git] DEBUG [detached HEAD faa5e74] merge master -Dorg -Ssuccess-only 2024-12-29 00:44:13,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:44:13,455 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:44:13,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-12-29 00:44:14,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2024-12-29 00:44:14,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2024-12-29 00:44:15,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2024-12-29 00:44:15,423 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:16,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-29 00:44:16,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:16,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:17,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2024-12-29 00:44:17,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:17,831 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-29 00:44:18,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2024-12-29 00:44:18,306 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:18,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-29 00:44:19,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:19,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:20,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2024-12-29 00:44:20,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:20,867 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-29 00:44:21,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2024-12-29 00:44:21,342 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:21,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-29 00:44:22,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:22,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:23,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2024-12-29 00:44:23,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:23,850 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-29 00:44:24,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2024-12-29 00:44:24,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2024-12-29 00:44:24,750 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:25,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-29 00:44:25,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:26,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:26,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2024-12-29 00:44:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:27,312 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-29 00:44:27,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2024-12-29 00:44:27,772 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:28,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-29 00:44:28,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:29,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:29,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2024-12-29 00:44:30,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:30,417 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-29 00:44:30,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2024-12-29 00:44:30,876 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:31,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-29 00:44:31,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:32,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:33,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2024-12-29 00:44:33,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:33,426 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-29 00:44:33,426 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:44:33,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-29 00:44:33,427 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:33,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:33,433 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:44:33,439 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:44:33,439 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:44:33,446 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:44:33,453 [ scc.git] DEBUG Already up to date. 2024-12-29 00:44:33,453 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2024-12-29 00:44:33,760 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:33,760 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2024-12-29 00:44:33,766 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2024-12-29 00:44:34,075 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:34,075 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2024-12-29 00:44:34,080 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2024-12-29 00:44:34,384 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:34,384 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2024-12-29 00:44:34,390 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2024-12-29 00:44:34,686 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:34,686 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2024-12-29 00:44:34,691 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2024-12-29 00:44:34,979 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:34,979 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2024-12-29 00:44:34,985 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2024-12-29 00:44:35,273 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-12-29 00:44:35,273 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2024-12-29 00:44:35,279 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:44:35,279 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:35,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:35,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-29 00:44:35,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:35,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2024-12-29 00:44:35,389 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:35,394 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2024-12-29 00:44:35,394 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2024-12-29 00:44:35,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:35,551 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-29 00:44:35,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:35,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2024-12-29 00:44:35,742 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-29 00:44:35,743 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:35,748 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2024-12-29 00:44:35,749 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2024-12-29 00:44:35,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:35,942 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-29 00:44:35,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:35,955 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-29 00:44:36,091 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-29 00:44:36,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-29 00:44:36,091 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:44:36,092 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:44:36,098 [ scc.git] DEBUG Calling 'git reset --hard 5743e4ad9fec779774b1116180cf584b6425a471' 2024-12-29 00:44:36,105 [ scc.git] DEBUG HEAD is now at 5743e4a merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2024-12-29 00:44:36,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:36,327 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2024-12-29 00:44:36,333 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-29 00:44:36,338 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2024-12-29 00:44:36,343 [ scc.config] DEBUG Found github.token 2024-12-29 00:44:36,343 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2024-12-29 00:44:36,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-29 00:44:36,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:36,404 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2024-12-29 00:44:36,530 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-29 00:44:36,530 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:36,536 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2024-12-29 00:44:36,536 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2024-12-29 00:44:36,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:36,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-29 00:44:36,735 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:36,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2024-12-29 00:44:36,817 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-29 00:44:36,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:36,822 [ scc.git] DEBUG package-lock.json | 6 +++--- 2024-12-29 00:44:36,822 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-12-29 00:44:37,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:37,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-29 00:44:37,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:37,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-29 00:44:37,167 [ scc.git] DEBUG Auto-merging package-lock.json 2024-12-29 00:44:37,167 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2024-12-29 00:44:37,168 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:44:37,168 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:44:37,175 [ scc.git] DEBUG Calling 'git reset --hard 872a181cf5e0380d1f562d722874ea4ed87fc1a6' 2024-12-29 00:44:37,183 [ scc.git] DEBUG HEAD is now at 872a181 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2024-12-29 00:44:37,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:37,504 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2024-12-29 00:44:37,511 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2024-12-29 00:44:37,517 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2024-12-29 00:44:37,522 [ scc.config] DEBUG Found github.token 2024-12-29 00:44:37,523 [ scc.git] DEBUG Adding comment to issue #118. 2024-12-29 00:44:38,328 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394 2024-12-29 00:44:38,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:44:38,370 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:38,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:38,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:44:38,416 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:44:38,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22ca113b20> has no local changes 2024-12-29 00:44:38,425 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:44:38,434 [ scc.git] DEBUG [detached HEAD 079202f] merge master -Dorg -Ssuccess-only 2024-12-29 00:44:38,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:44:38,434 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:44:38,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-12-29 00:44:39,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2024-12-29 00:44:39,349 [ scc.repo] DEBUG # ... Include label: dependencies 2024-12-29 00:44:39,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-29 00:44:40,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:40,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:41,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2024-12-29 00:44:41,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:41,971 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-29 00:44:42,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2024-12-29 00:44:42,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2024-12-29 00:44:43,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-12-29 00:44:43,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-12-29 00:44:44,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-29 00:44:44,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:45,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:45,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-12-29 00:44:46,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:46,200 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-29 00:44:46,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-12-29 00:44:47,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-12-29 00:44:47,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-29 00:44:48,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:48,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:44:49,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-12-29 00:44:49,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:49,546 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-12-29 00:44:50,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-12-29 00:44:50,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-12-29 00:44:50,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-29 00:44:51,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:44:51,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-12-29 00:44:52,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:44:52,319 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-12-29 00:44:52,319 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:44:52,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-29 00:44:52,320 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:52,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:52,326 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:44:52,333 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:44:52,333 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:44:52,340 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:44:52,348 [ scc.git] DEBUG Already up to date. 2024-12-29 00:44:52,348 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-12-29 00:44:54,248 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-29 00:44:54,248 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-12-29 00:44:54,253 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-12-29 00:44:55,275 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-29 00:44:55,276 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-12-29 00:44:55,280 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-12-29 00:44:55,597 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-29 00:44:55,598 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-12-29 00:44:55,603 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2024-12-29 00:44:55,936 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-12-29 00:44:55,937 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2024-12-29 00:44:55,941 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:44:55,941 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:55,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:55,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-29 00:44:55,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:55,958 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-12-29 00:44:56,313 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-12-29 00:44:56,314 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:56,318 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-12-29 00:44:56,318 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-12-29 00:44:56,318 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-12-29 00:44:56,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:56,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-29 00:44:56,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:56,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-12-29 00:44:56,626 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-12-29 00:44:56,627 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-12-29 00:44:56,627 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-12-29 00:44:56,627 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-12-29 00:44:56,627 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:56,632 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-12-29 00:44:56,632 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-12-29 00:44:56,632 [ scc.git] DEBUG src/app/header.html | 5 + 2024-12-29 00:44:56,632 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-12-29 00:44:56,632 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-12-29 00:44:56,632 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-12-29 00:44:56,632 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-12-29 00:44:56,632 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-12-29 00:44:56,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:56,842 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-29 00:44:56,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:56,855 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-12-29 00:44:56,965 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-12-29 00:44:56,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:56,970 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-12-29 00:44:56,970 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-12-29 00:44:56,970 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-12-29 00:44:57,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:57,230 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-29 00:44:57,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:57,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2024-12-29 00:44:57,487 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:44:57,497 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2024-12-29 00:44:57,497 [ scc.git] DEBUG package.json | 2 +- 2024-12-29 00:44:57,497 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2024-12-29 00:44:57,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:44:57,640 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:44:57,680 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:44:57,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:44:57,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:44:57,723 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:44:57,733 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22ca0d0e80> has no local changes 2024-12-29 00:44:57,733 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:44:57,745 [ scc.git] DEBUG [detached HEAD b2c9237] merge master -Dorg -Ssuccess-only 2024-12-29 00:44:57,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:44:57,746 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:44:58,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-12-29 00:44:58,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-12-29 00:44:59,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-12-29 00:44:59,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-29 00:45:00,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:00,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-12-29 00:45:01,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:01,045 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-12-29 00:45:01,046 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:01,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-29 00:45:01,046 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:01,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:01,052 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:01,058 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:01,058 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:01,064 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:01,069 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:01,070 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-12-29 00:45:01,876 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-12-29 00:45:01,876 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-12-29 00:45:01,881 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:01,882 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:01,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:01,889 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-29 00:45:01,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:01,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-12-29 00:45:01,914 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:45:01,917 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-12-29 00:45:01,917 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-12-29 00:45:01,917 [ scc.git] DEBUG requirements.txt | 2 +- 2024-12-29 00:45:01,917 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-12-29 00:45:01,917 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-12-29 00:45:01,917 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-12-29 00:45:02,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:02,051 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:02,093 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:02,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:02,100 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:02,140 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:02,147 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c80975b0> has no local changes 2024-12-29 00:45:02,147 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:02,156 [ scc.git] DEBUG [detached HEAD 2fd34ba] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:02,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:02,157 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:02,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-12-29 00:45:03,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-12-29 00:45:03,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-12-29 00:45:04,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-29 00:45:04,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:05,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-12-29 00:45:05,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:05,513 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-29 00:45:06,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-12-29 00:45:06,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-12-29 00:45:07,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-29 00:45:07,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:07,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-12-29 00:45:08,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:08,386 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-29 00:45:08,386 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:08,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-29 00:45:08,386 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:08,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:08,393 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:08,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:08,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:08,404 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:08,409 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:08,409 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-12-29 00:45:09,273 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-29 00:45:09,274 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-12-29 00:45:09,279 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-12-29 00:45:09,999 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-12-29 00:45:10,000 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-12-29 00:45:10,004 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:10,005 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:10,005 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:10,010 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-29 00:45:10,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:10,023 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-29 00:45:10,145 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-12-29 00:45:10,145 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-12-29 00:45:10,145 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-29 00:45:10,145 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-29 00:45:10,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:10,146 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:10,152 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-29 00:45:10,160 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-29 00:45:10,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:10,308 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-12-29 00:45:10,317 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-29 00:45:10,405 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-12-29 00:45:10,411 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:10,412 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-12-29 00:45:10,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-29 00:45:10,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:10,437 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-29 00:45:10,472 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-12-29 00:45:10,472 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-12-29 00:45:10,472 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-12-29 00:45:10,472 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:10,473 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:10,480 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-29 00:45:10,489 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build 2024-12-29 00:45:10,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:10,712 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7' 2024-12-29 00:45:10,721 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997' 2024-12-29 00:45:10,727 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-12-29 00:45:10,732 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:10,732 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-12-29 00:45:10,733 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:10,774 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:10,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:10,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:10,819 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:10,826 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c80aab80> has no local changes 2024-12-29 00:45:10,827 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:10,836 [ scc.git] DEBUG [detached HEAD 4b23091] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:10,836 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:10,837 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:11,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-12-29 00:45:11,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2024-12-29 00:45:12,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-12-29 00:45:12,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-12-29 00:45:13,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-12-29 00:45:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-12-29 00:45:14,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-12-29 00:45:14,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-12-29 00:45:14,643 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:14,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-29 00:45:14,643 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:14,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:14,650 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:14,656 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:14,656 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:14,662 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:14,667 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:14,667 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:14,667 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:14,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:14,673 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:14,715 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:14,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:14,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:14,765 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:14,772 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c8087f40> has no local changes 2024-12-29 00:45:14,772 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:14,781 [ scc.git] DEBUG [detached HEAD 09c7aa1] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:14,781 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:14,781 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:15,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2 2024-12-29 00:45:15,072 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:15,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-29 00:45:15,072 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:15,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:15,078 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:15,083 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:15,083 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:15,088 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:15,093 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:15,094 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:15,094 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:15,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:15,098 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:15,138 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:15,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:15,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:15,181 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:15,187 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c804d940> has no local changes 2024-12-29 00:45:15,188 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:15,196 [ scc.git] DEBUG [detached HEAD ae56a10] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:15,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:15,197 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:15,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-12-29 00:45:16,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-12-29 00:45:16,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-12-29 00:45:16,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-29 00:45:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:17,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-12-29 00:45:18,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:18,331 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-29 00:45:18,331 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:18,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-29 00:45:18,331 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:18,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:18,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:18,344 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:18,344 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:18,350 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:18,358 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:18,358 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-12-29 00:45:18,681 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-12-29 00:45:18,681 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-12-29 00:45:18,686 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:18,686 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:18,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:18,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-29 00:45:18,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:18,702 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-12-29 00:45:18,712 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-12-29 00:45:18,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:45:18,715 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-12-29 00:45:18,715 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-12-29 00:45:18,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:18,860 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:18,901 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:18,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:18,907 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:18,946 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:18,952 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07ca5e0> has no local changes 2024-12-29 00:45:18,953 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:18,962 [ scc.git] DEBUG [detached HEAD 627c8e8] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:18,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:18,963 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:19,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-12-29 00:45:19,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-12-29 00:45:20,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-12-29 00:45:20,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-29 00:45:21,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:21,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-12-29 00:45:22,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:22,307 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-29 00:45:22,307 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:22,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-29 00:45:22,308 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:22,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:22,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:22,319 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:22,319 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:22,325 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:22,330 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:22,331 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-12-29 00:45:22,935 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-12-29 00:45:22,935 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-12-29 00:45:22,940 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:22,941 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:22,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:22,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-29 00:45:22,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:22,959 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-29 00:45:23,169 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG Auto-merging setup.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-12-29 00:45:23,169 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:23,169 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:23,177 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-29 00:45:23,185 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2024-12-29 00:45:23,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:23,325 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-12-29 00:45:23,332 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2024-12-29 00:45:23,349 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2024-12-29 00:45:23,356 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:23,356 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-12-29 00:45:23,356 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:23,396 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:23,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:23,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:23,441 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:23,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07ca7f0> has no local changes 2024-12-29 00:45:23,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:23,456 [ scc.git] DEBUG [detached HEAD c9c903a] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:23,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:23,457 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:23,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-12-29 00:45:24,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2024-12-29 00:45:24,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2024-12-29 00:45:25,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2024-12-29 00:45:25,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:26,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:45:26,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None 2024-12-29 00:45:27,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None 2024-12-29 00:45:27,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-12-29 00:45:28,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-12-29 00:45:28,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-29 00:45:29,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:29,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-12-29 00:45:30,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:30,008 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-29 00:45:30,008 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:30,008 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-29 00:45:30,009 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:30,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:30,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:30,020 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:30,020 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:30,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:30,032 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:30,032 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-12-29 00:45:30,466 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-12-29 00:45:30,466 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-12-29 00:45:30,471 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:30,471 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:30,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:30,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-12-29 00:45:30,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:30,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-12-29 00:45:30,519 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:45:30,522 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-12-29 00:45:30,522 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-12-29 00:45:30,522 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-12-29 00:45:30,522 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-12-29 00:45:30,523 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-12-29 00:45:30,525 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-12-29 00:45:30,525 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-12-29 00:45:30,526 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-12-29 00:45:30,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:30,666 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:30,709 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:30,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:30,714 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:30,753 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:30,760 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07ca640> has no local changes 2024-12-29 00:45:30,760 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:30,770 [ scc.git] DEBUG [detached HEAD e445860] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:30,770 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:30,770 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:31,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-12-29 00:45:31,091 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:31,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-29 00:45:31,092 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:31,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:31,098 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:31,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:31,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:31,108 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:31,114 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:31,114 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:31,114 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:31,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:31,119 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:31,168 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:31,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:31,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:31,213 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:31,219 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c806e4c0> has no local changes 2024-12-29 00:45:31,220 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:31,228 [ scc.git] DEBUG [detached HEAD 3cb3719] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:31,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:31,229 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:31,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2024-12-29 00:45:32,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None 2024-12-29 00:45:32,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20/comments HTTP/1.1" 200 None 2024-12-29 00:45:33,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-29 00:45:33,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:34,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:45:34,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None 2024-12-29 00:45:34,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:34,871 [ scc.repo] DEBUG - PR 20 jburel 'Build' 2024-12-29 00:45:34,871 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:34,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-29 00:45:34,871 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:34,871 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:34,877 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:34,883 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:34,883 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:34,888 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:34,894 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:34,894 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head' 2024-12-29 00:45:35,338 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2024-12-29 00:45:35,338 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD 2024-12-29 00:45:35,343 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:35,343 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:35,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:35,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea' 2024-12-29 00:45:35,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:35,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea' 2024-12-29 00:45:35,394 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:45:35,397 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +- 2024-12-29 00:45:35,397 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++----- 2024-12-29 00:45:35,398 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++ 2024-12-29 00:45:35,398 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-) 2024-12-29 00:45:35,398 [ scc.git] DEBUG create mode 100755 .omeroci/app-build 2024-12-29 00:45:35,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:35,558 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:35,600 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:35,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:35,607 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:35,648 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:35,655 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22c806e790> has no local changes 2024-12-29 00:45:35,655 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:35,664 [ scc.git] DEBUG [detached HEAD 5b7aab3] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:35,665 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:35,665 [ scc.git] INFO Overriding base-branch from master to main 2024-12-29 00:45:35,665 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:36,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-12-29 00:45:36,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None 2024-12-29 00:45:37,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None 2024-12-29 00:45:37,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None 2024-12-29 00:45:38,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:38,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:45:38,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-12-29 00:45:39,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-12-29 00:45:39,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-12-29 00:45:40,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-29 00:45:40,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:41,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-12-29 00:45:41,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:41,703 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-29 00:45:41,704 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:41,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-29 00:45:41,704 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:41,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:41,714 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-12-29 00:45:41,720 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:41,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-12-29 00:45:41,727 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-12-29 00:45:41,734 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:41,734 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-12-29 00:45:42,108 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-12-29 00:45:42,108 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-12-29 00:45:42,113 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:42,113 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:42,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,120 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-29 00:45:42,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,132 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-29 00:45:42,222 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-12-29 00:45:42,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-12-29 00:45:42,222 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:42,222 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:42,230 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-29 00:45:42,238 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build 2024-12-29 00:45:42,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:42,384 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-12-29 00:45:42,391 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2024-12-29 00:45:42,398 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-12-29 00:45:42,404 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:42,404 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-12-29 00:45:42,404 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:42,446 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:42,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,452 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:42,492 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:42,499 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07a1580> has no local changes 2024-12-29 00:45:42,499 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:42,508 [ scc.git] DEBUG [detached HEAD edc03c7] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:42,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:42,508 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:42,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-12-29 00:45:42,813 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:42,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-29 00:45:42,813 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:42,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,819 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:42,824 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:42,824 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:42,829 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:42,835 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:42,835 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:42,835 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:42,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,840 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:42,880 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:42,880 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:42,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:42,928 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:42,935 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07a14f0> has no local changes 2024-12-29 00:45:42,936 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:42,945 [ scc.git] DEBUG [detached HEAD 3c4234d] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:42,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:42,945 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:43,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-12-29 00:45:43,240 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:43,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-29 00:45:43,240 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:43,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:43,246 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:43,252 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:43,252 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:43,258 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:43,265 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:43,265 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:43,265 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:43,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:43,272 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:43,317 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:43,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:43,324 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:43,369 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:43,376 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07b2bb0> has no local changes 2024-12-29 00:45:43,377 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:43,387 [ scc.git] DEBUG [detached HEAD ce07e94] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:43,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:43,387 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:43,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-12-29 00:45:44,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-12-29 00:45:44,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-12-29 00:45:45,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-29 00:45:45,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:46,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-12-29 00:45:46,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:46,662 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-12-29 00:45:46,662 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:46,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-29 00:45:46,662 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:46,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:46,671 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-12-29 00:45:46,678 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:46,679 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-12-29 00:45:46,686 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-12-29 00:45:46,695 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:46,695 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-12-29 00:45:47,155 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-12-29 00:45:47,155 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-12-29 00:45:47,160 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:47,160 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:47,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:47,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-29 00:45:47,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:47,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-29 00:45:47,229 [ scc.git] DEBUG Auto-merging Dockerfile 2024-12-29 00:45:47,229 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-12-29 00:45:47,229 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:47,230 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:47,237 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-29 00:45:47,244 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-12-29 00:45:47,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:47,379 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-12-29 00:45:47,388 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-12-29 00:45:47,395 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-12-29 00:45:47,402 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:47,402 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-12-29 00:45:47,402 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:47,447 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:47,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:47,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:47,502 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:47,511 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b0758a60> has no local changes 2024-12-29 00:45:47,511 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:47,523 [ scc.git] DEBUG [detached HEAD ea83ec5] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:47,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:47,524 [ scc.git] INFO Overriding base-branch from master to develop 2024-12-29 00:45:47,524 [ scc.repo] DEBUG ## PRs found: 2024-12-29 00:45:47,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-12-29 00:45:48,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-12-29 00:45:48,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-12-29 00:45:49,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-29 00:45:49,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:50,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-12-29 00:45:50,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-12-29 00:45:51,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:51,132 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-29 00:45:51,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-12-29 00:45:52,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-12-29 00:45:52,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-29 00:45:52,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-12-29 00:45:53,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-12-29 00:45:53,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-12-29 00:45:53,839 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-29 00:45:54,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-12-29 00:45:54,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-12-29 00:45:55,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-12-29 00:45:55,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-12-29 00:45:55,793 [ scc.repo] DEBUG ## Branches found: 2024-12-29 00:45:55,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-29 00:45:55,793 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:55,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:55,800 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-12-29 00:45:55,805 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-12-29 00:45:55,806 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-12-29 00:45:55,811 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-12-29 00:45:55,816 [ scc.git] DEBUG Already up to date. 2024-12-29 00:45:55,816 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-12-29 00:45:56,185 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-29 00:45:56,185 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-12-29 00:45:56,190 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-12-29 00:45:57,081 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-12-29 00:45:57,081 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-12-29 00:45:57,086 [ scc.git] DEBUG ## Unique users: [] 2024-12-29 00:45:57,086 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:57,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:57,092 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-29 00:45:57,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:57,108 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-29 00:45:57,224 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2024-12-29 00:45:57,224 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-12-29 00:45:57,225 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-12-29 00:45:57,231 [ scc.git] DEBUG Calling 'git reset --hard 4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-29 00:45:57,239 [ scc.git] DEBUG HEAD is now at 4b4c755 Bump version: 5.9.0 → 5.9.1.dev0 2024-12-29 00:45:57,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:57,379 [ scc.git] DEBUG Calling 'git merge-base 4b4c755af4ccf8a5e709548d1f8415fab48a4867 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-12-29 00:45:57,389 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2024-12-29 00:45:57,396 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#290](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-12-29 00:45:57,401 [ scc.config] DEBUG Found github.token 2024-12-29 00:45:57,401 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-12-29 00:45:57,401 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-29 00:45:57,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:57,414 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-12-29 00:45:57,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-12-29 00:45:57,429 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-12-29 00:45:57,429 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-12-29 00:45:57,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:57,763 [ scc.git] DEBUG Calling 'git submodule update' 2024-12-29 00:45:57,805 [ scc.git] DEBUG Get sha1 of %s 2024-12-29 00:45:57,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-12-29 00:45:57,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:57,853 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:45:57,861 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22b07586a0> has no local changes 2024-12-29 00:45:57,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:45:57,873 [ scc.git] DEBUG [detached HEAD 50b9005] merge master -Dorg -Ssuccess-only 2024-12-29 00:45:57,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:45:57,874 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-12-29 00:45:57,952 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-12-29 00:45:58,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:58,165 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-12-29 00:45:58,172 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-12-29 00:45:58,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:58,548 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-12-29 00:45:58,555 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-12-29 00:45:58,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:58,945 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-12-29 00:45:58,951 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-12-29 00:45:59,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:59,340 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-12-29 00:45:59,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:45:59,713 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-12-29 00:45:59,718 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-12-29 00:46:00,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:00,101 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-12-29 00:46:00,107 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-12-29 00:46:00,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:00,491 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-12-29 00:46:00,500 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-12-29 00:46:00,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:00,887 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-12-29 00:46:00,892 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-12-29 00:46:01,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:01,274 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-12-29 00:46:01,279 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-12-29 00:46:01,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:01,673 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-12-29 00:46:01,677 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-12-29 00:46:02,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:02,060 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-12-29 00:46:02,065 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-12-29 00:46:02,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:02,450 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-12-29 00:46:02,455 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-12-29 00:46:02,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:02,851 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-12-29 00:46:03,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:03,237 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-12-29 00:46:03,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:03,627 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-12-29 00:46:03,632 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-12-29 00:46:04,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:04,025 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-12-29 00:46:04,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:04,412 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-12-29 00:46:04,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:04,790 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-12-29 00:46:04,796 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-12-29 00:46:05,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:05,175 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-12-29 00:46:05,181 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-12-29 00:46:05,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:05,566 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-12-29 00:46:05,583 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-12-29 00:46:05,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:05,964 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-12-29 00:46:05,970 [ scc.config] DEBUG Found submodule.scripts.url 2024-12-29 00:46:06,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-12-29 00:46:06,349 [ scc.config] DEBUG Found submodule.scripts.branch 2024-12-29 00:46:06,349 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-12-29 00:46:06,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f22cb1e5370> has local changes 2024-12-29 00:46:06,443 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) - PR 600 Rdornier 'Label on rois' (user: Rdornier) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Repository: ome/omero-prometheus-tools Already up to date. Repository: ome/omero-rois Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Merged PRs: - PR 20 jburel 'Build' Repository: ome/omero-web-zarr Excluded PRs: - PR 18 will-moore 'Build' (status: failure) - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#290 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/290/)' 2024-12-29 00:46:06,459 [ scc.git] DEBUG [detached HEAD 3089b20] merge master -Dorg -Ssuccess-only 2024-12-29 00:46:06,459 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-12-29 00:46:06,459 [ scc.merge] INFO Repository: ome/omero-plugins 2024-12-29 00:46:06,459 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,459 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,459 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,459 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-12-29 00:46:06,459 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,459 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-12-29 00:46:06,459 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,459 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-12-29 00:46:06,459 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,459 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-12-29 00:46:06,460 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-12-29 00:46:06,460 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-12-29 00:46:06,460 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-12-29 00:46:06,460 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,460 [ scc.merge] INFO Repository: ome/omero-figure 2024-12-29 00:46:06,460 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' (user: Tom-TBT) 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier) 2024-12-29 00:46:06,460 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-12-29 00:46:06,460 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,460 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-12-29 00:46:06,461 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Repository: ome/omero-gallery 2024-12-29 00:46:06,461 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-12-29 00:46:06,461 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-12-29 00:46:06,461 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,461 [ scc.merge] INFO Repository: ome/omero-mapr 2024-12-29 00:46:06,461 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,461 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-12-29 00:46:06,461 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,461 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: ome/omero-metadata 2024-12-29 00:46:06,462 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: ome/omero-parade 2024-12-29 00:46:06,462 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-12-29 00:46:06,462 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-12-29 00:46:06,462 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: ome/omero-rois 2024-12-29 00:46:06,462 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: ome/omero-signup 2024-12-29 00:46:06,462 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-12-29 00:46:06,462 [ scc.merge] INFO 2024-12-29 00:46:06,462 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-12-29 00:46:06,462 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,462 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles) 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: ome/omero-upload 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 20 jburel 'Build' 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-12-29 00:46:06,463 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure) 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,463 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,463 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-12-29 00:46:06,463 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,463 [ scc.merge] INFO 2024-12-29 00:46:06,464 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,464 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-12-29 00:46:06,464 [ scc.merge] INFO 2024-12-29 00:46:06,464 [ scc.merge] INFO Repository: ome/scripts 2024-12-29 00:46:06,464 [ scc.merge] INFO Excluded PRs: 2024-12-29 00:46:06,464 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-12-29 00:46:06,464 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-12-29 00:46:06,464 [ scc.merge] INFO Already up to date. 2024-12-29 00:46:06,464 [ scc.merge] INFO 2024-12-29 00:46:06,464 [ scc.merge] INFO Merged PRs: 2024-12-29 00:46:06,464 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-12-29 00:46:06,464 [ scc.merge] INFO 2024-12-29 00:46:06,464 [ scc.merge] INFO Conflicting PRs (not included): 2024-12-29 00:46:06,464 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-12-29 00:46:06,464 [ scc.merge] INFO 2024-12-29 00:46:06,464 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-12-29 00:46:06,464 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-12-29 00:46:06,471 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-12-29 00:46:06,478 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-12-29 00:46:06,484 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-12-29 00:46:06,490 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-12-29 00:46:06,497 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-12-29 00:46:06,503 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-12-29 00:46:06,509 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-12-29 00:46:06,516 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-12-29 00:46:06,522 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-12-29 00:46:06,529 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-12-29 00:46:06,536 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-12-29 00:46:06,542 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-12-29 00:46:06,549 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-12-29 00:46:06,556 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-12-29 00:46:06,563 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-12-29 00:46:06,570 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-12-29 00:46:06,577 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-12-29 00:46:06,583 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,592 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-12-29 00:46:06,592 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-12-29 00:46:06,599 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-12-29 00:46:06,605 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-12-29 00:46:06,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-12-29 00:46:06,612 [ scc.git] DEBUG Calling 'git remote' 2024-12-29 00:46:06,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: 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or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 52be70c] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from fb316a7e nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from b4102d4 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD ff45bd4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-12-29 00:46:54,053 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-12-29 00:47:02,901 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-12-29 00:47:05,177 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-29 00:47:09,628 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-12-29 00:47:48,806 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS