Started by upstream project "Trigger" build number 8 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 12 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.6.17-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-49.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.6.17-py3-none-any.whl (133 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.6.17 cffi-2.1.0 charset_normalizer-3.4.9 cryptography-49.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-07-09 10:58:33,076 [ scc.config] DEBUG Found github.token 2026-07-09 10:58:33,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-09 10:58:33,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:58:33,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:58:34,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-09 10:58:34,240 [ scc.gh] DEBUG 4923 remaining from 5000 (Reset at 11:07 2026-07-09 10:58:34,240 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:58:34,248 [ scc.git] DEBUG Check current status 2026-07-09 10:58:34,248 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:58:34,267 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-09 10:58:34,268 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:58:34,461 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-09 10:58:34,495 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-09 10:58:34,536 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-09 10:58:34,574 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-09 10:58:34,628 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-09 10:58:34,663 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-09 10:58:34,703 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-09 10:58:34,746 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-09 10:58:34,785 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-09 10:58:34,823 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-09 10:58:34,861 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-09 10:58:34,900 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-09 10:58:34,941 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-09 10:58:34,981 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-09 10:58:35,021 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-09 10:58:35,058 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-09 10:58:35,089 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-09 10:58:35,137 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-09 10:58:35,170 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-09 10:58:35,203 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-09 10:58:35,236 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-09 10:58:35,257 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-09 10:58:35,267 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:58:35,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-09 10:58:36,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:58:36,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:58:37,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:58:37,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:58:37,514 [ scc.git] DEBUG Resetting... 2026-07-09 10:58:37,514 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-09 10:58:37,806 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-09 10:58:37,807 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-09 10:58:38,996 [ scc.git] DEBUG Check current status 2026-07-09 10:58:38,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:58:39,013 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-07-09 10:58:39,014 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:58:39,199 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-09 10:58:39,235 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-09 10:58:39,270 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-09 10:58:39,301 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-09 10:58:39,329 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-07-09 10:58:39,358 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-09 10:58:39,386 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-09 10:58:39,424 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-07-09 10:58:39,460 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-09 10:58:39,493 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-09 10:58:39,521 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-09 10:58:39,549 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-09 10:58:39,577 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-09 10:58:39,604 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-09 10:58:39,633 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-09 10:58:39,665 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-09 10:58:39,695 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-09 10:58:39,723 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-09 10:58:39,753 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-09 10:58:39,782 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-09 10:58:39,817 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-09 10:58:39,839 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-07-09 10:58:39,840 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-09 10:58:39,840 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-09 10:58:39,840 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-09 10:58:39,840 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-09 10:58:39,840 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-09 10:58:39,840 [ scc.repo] DEBUG ## PRs found: 2026-07-09 10:58:40,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-09 10:58:40,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-09 10:58:40,694 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 10:58:40,694 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-09 10:58:41,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-09 10:58:41,215 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 10:58:41,215 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-09 10:58:41,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-09 10:58:41,732 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 10:58:41,732 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-09 10:58:41,732 [ scc.repo] DEBUG ## Branches found: 2026-07-09 10:58:41,732 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 10:58:41,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:41,744 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 10:58:41,760 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 10:58:41,761 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 10:58:41,782 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 10:58:41,847 [ scc.git] DEBUG Already up to date. 2026-07-09 10:58:41,847 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-09 10:58:42,266 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 10:58:42,267 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-09 10:58:42,294 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-09 10:58:42,675 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 10:58:42,675 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-09 10:58:42,701 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-09 10:58:43,100 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 10:58:43,100 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-09 10:58:43,126 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 10:58:43,126 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 10:58:43,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:43,140 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-09 10:58:43,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:43,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-09 10:58:43,856 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 10:58:43,912 [ scc.git] DEBUG scripts | 2 +- 2026-07-09 10:58:43,912 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 10:58:44,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:58:44,107 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-09 10:58:44,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:44,152 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-09 10:58:44,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 10:58:44,932 [ scc.git] DEBUG omero-figure | 2 +- 2026-07-09 10:58:44,932 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 10:58:45,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:58:45,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-09 10:58:45,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:45,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-09 10:58:45,831 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 10:58:45,885 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-07-09 10:58:45,885 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 10:58:46,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:58:46,092 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 10:58:46,721 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-09 10:58:47,391 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-09 10:58:47,649 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-09 10:58:47,650 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 10:58:47,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 10:58:47,659 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 10:58:49,479 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff50c63a650> has no local changes 2026-07-09 10:58:49,479 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 10:58:50,785 [ scc.git] DEBUG [detached HEAD d22f8a6] merge master -Dorg -Snone 2026-07-09 10:58:50,787 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-09 10:58:50,787 [ scc.merge] INFO Already up to date. 2026-07-09 10:58:50,787 [ scc.merge] INFO 2026-07-09 10:58:50,787 [ scc.merge] INFO Merged PRs: 2026-07-09 10:58:50,787 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-09 10:58:50,787 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-09 10:58:50,787 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-09 10:58:50,787 [ scc.merge] INFO 2026-07-09 10:58:50,787 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-09 10:58:50,787 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '188872793f83c8a30a4cda1d0db1412c61401c00' Submodule path 'omero-iviewer': checked out 'cae0b0260125ca856c05b4ac7d723879827a6e76' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-07-09 10:59:08,273 [ scc.config] DEBUG Found github.token 2026-07-09 10:59:08,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-07-09 10:59:08,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:59:08,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 10:59:09,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-07-09 10:59:09,394 [ scc.gh] DEBUG 4920 remaining from 5000 (Reset at 11:07 2026-07-09 10:59:09,395 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:09,404 [ scc.git] DEBUG Check current status 2026-07-09 10:59:09,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:09,422 [ scc.git] DEBUG d22f8a6 merge master -Dorg -Snone 2026-07-09 10:59:09,423 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:09,596 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-09 10:59:09,622 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-09 10:59:09,648 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-07-09 10:59:09,678 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-07-09 10:59:09,717 [ scc.git] DEBUG +188872793f83c8a30a4cda1d0db1412c61401c00 omero-figure (v8.0.1.rc2-14-g18887279) 2026-07-09 10:59:09,750 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-09 10:59:09,782 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-09 10:59:09,818 [ scc.git] DEBUG +cae0b0260125ca856c05b4ac7d723879827a6e76 omero-iviewer (v0.17.0-3-gcae0b026) 2026-07-09 10:59:09,852 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-09 10:59:09,886 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-07-09 10:59:09,920 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-09 10:59:09,957 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-09 10:59:09,994 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-07-09 10:59:10,028 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-09 10:59:10,065 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-07-09 10:59:10,102 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-09 10:59:10,139 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-07-09 10:59:10,174 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-07-09 10:59:10,209 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-09 10:59:10,244 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-09 10:59:10,276 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-09 10:59:10,294 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-07-09 10:59:10,304 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:10,304 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-07-09 10:59:10,306 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-07-09 10:59:10,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-07-09 10:59:11,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:11,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:12,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:12,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:12,554 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:12,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-09 10:59:12,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:12,745 [ scc.git] DEBUG Check current status 2026-07-09 10:59:12,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:12,762 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-07-09 10:59:12,763 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:12,874 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:13,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-07-09 10:59:13,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:14,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:14,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:15,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:15,082 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:15,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:15,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-09 10:59:15,180 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:15,190 [ scc.git] DEBUG Check current status 2026-07-09 10:59:15,190 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:15,206 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-07-09 10:59:15,207 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:15,309 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:15,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-07-09 10:59:16,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:16,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:17,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:17,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:17,563 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:17,660 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:17,661 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-09 10:59:17,661 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:17,671 [ scc.git] DEBUG Check current status 2026-07-09 10:59:17,671 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:17,687 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-07-09 10:59:17,688 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:17,792 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:18,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-07-09 10:59:18,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:19,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:19,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:20,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:20,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:20,133 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:20,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-09 10:59:20,134 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:20,145 [ scc.git] DEBUG Check current status 2026-07-09 10:59:20,145 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:20,163 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-09 10:59:20,164 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:20,273 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:20,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-07-09 10:59:21,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:21,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:22,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:22,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:22,495 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:22,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:22,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-09 10:59:22,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:22,610 [ scc.git] DEBUG Check current status 2026-07-09 10:59:22,610 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:22,628 [ scc.git] DEBUG 18887279 Merge pull request #693 from ome/dependabot/npm_and_yarn/dompurify-3.4.9 2026-07-09 10:59:22,629 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:22,733 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:23,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-07-09 10:59:23,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:24,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:24,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:25,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:25,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:25,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:25,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-09 10:59:25,242 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:25,254 [ scc.git] DEBUG Check current status 2026-07-09 10:59:25,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:25,272 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-07-09 10:59:25,273 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:25,375 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:25,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-07-09 10:59:26,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:26,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:27,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:27,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:27,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:27,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:27,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-09 10:59:27,673 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:27,685 [ scc.git] DEBUG Check current status 2026-07-09 10:59:27,685 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:27,705 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-07-09 10:59:27,705 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:27,819 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:28,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-07-09 10:59:28,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:29,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:29,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:30,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:30,218 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:30,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:30,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-09 10:59:30,334 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:30,347 [ scc.git] DEBUG Check current status 2026-07-09 10:59:30,347 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:30,367 [ scc.git] DEBUG cae0b026 Merge pull request #534 from will-moore/fix_docs_settings_link 2026-07-09 10:59:30,369 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:30,485 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:30,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-07-09 10:59:31,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:31,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:32,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:32,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:32,858 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:32,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:32,964 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-09 10:59:32,964 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:32,976 [ scc.git] DEBUG Check current status 2026-07-09 10:59:32,976 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:32,995 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-07-09 10:59:32,996 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:33,121 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:33,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-07-09 10:59:33,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:34,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:34,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:35,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:35,327 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:35,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:35,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-09 10:59:35,434 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:35,448 [ scc.git] DEBUG Check current status 2026-07-09 10:59:35,448 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:35,468 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-09 10:59:35,469 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:35,584 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:35,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-07-09 10:59:36,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:36,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:37,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:37,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:37,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:37,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-09 10:59:37,929 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:37,944 [ scc.git] DEBUG Check current status 2026-07-09 10:59:37,944 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:37,965 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-07-09 10:59:37,966 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:38,086 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:38,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-07-09 10:59:38,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:39,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:39,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:40,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:40,368 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:40,475 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:40,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-09 10:59:40,476 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:40,491 [ scc.git] DEBUG Check current status 2026-07-09 10:59:40,491 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:40,514 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-07-09 10:59:40,515 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:40,642 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:40,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-07-09 10:59:41,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:41,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:42,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:42,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:42,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:42,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:42,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-09 10:59:42,950 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:42,965 [ scc.git] DEBUG Check current status 2026-07-09 10:59:42,966 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:42,987 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-07-09 10:59:42,988 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:43,112 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:43,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-07-09 10:59:43,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:44,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:44,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:45,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:45,345 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:45,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:45,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-09 10:59:45,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:45,475 [ scc.git] DEBUG Check current status 2026-07-09 10:59:45,475 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:45,498 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-07-09 10:59:45,499 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:45,623 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:45,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-07-09 10:59:46,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:46,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:47,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:47,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:47,835 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:47,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:47,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-09 10:59:47,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:47,948 [ scc.git] DEBUG Check current status 2026-07-09 10:59:47,948 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:47,967 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-07-09 10:59:47,968 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:48,069 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:48,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-09 10:59:48,287 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-09 10:59:48,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-07-09 10:59:49,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:49,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:50,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:50,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:50,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:50,603 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:50,604 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-09 10:59:50,604 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:50,617 [ scc.git] DEBUG Check current status 2026-07-09 10:59:50,617 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:50,638 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-07-09 10:59:50,639 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:50,752 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:51,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-07-09 10:59:51,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:52,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:52,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:52,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:52,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:53,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:53,051 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-09 10:59:53,052 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:53,066 [ scc.git] DEBUG Check current status 2026-07-09 10:59:53,067 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:53,088 [ scc.git] DEBUG 160d894 Fix display of code 2026-07-09 10:59:53,090 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:53,207 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:53,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-07-09 10:59:54,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:54,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:54,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:55,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:55,388 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:55,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:55,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-09 10:59:55,513 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:55,528 [ scc.git] DEBUG Check current status 2026-07-09 10:59:55,528 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:55,549 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-09 10:59:55,550 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:55,663 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:55,663 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-07-09 10:59:55,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-07-09 10:59:56,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:56,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 10:59:57,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 10:59:57,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 10:59:57,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 10:59:58,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 10:59:58,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-09 10:59:58,029 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 10:59:58,044 [ scc.git] DEBUG Check current status 2026-07-09 10:59:58,044 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 10:59:58,065 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-07-09 10:59:58,066 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 10:59:58,181 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 10:59:58,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-09 10:59:58,427 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-09 10:59:58,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-07-09 10:59:59,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 10:59:59,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 11:00:00,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 11:00:00,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 11:00:00,619 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:00,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:00,733 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-09 11:00:00,734 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 11:00:00,748 [ scc.git] DEBUG Check current status 2026-07-09 11:00:00,748 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 11:00:00,768 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-07-09 11:00:00,769 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 11:00:00,892 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 11:00:01,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-09 11:00:01,106 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-09 11:00:01,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-07-09 11:00:02,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 11:00:02,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 11:00:03,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 11:00:03,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 11:00:03,541 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:03,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:03,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-09 11:00:03,659 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 11:00:03,675 [ scc.git] DEBUG Check current status 2026-07-09 11:00:03,675 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 11:00:03,696 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-07-09 11:00:03,697 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 11:00:03,826 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 11:00:04,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-07-09 11:00:04,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 11:00:05,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 11:00:05,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 11:00:06,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 11:00:06,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:06,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:06,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-09 11:00:06,196 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-07-09 11:00:06,210 [ scc.git] DEBUG Check current status 2026-07-09 11:00:06,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 11:00:06,228 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-07-09 11:00:06,230 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 11:00:06,341 [ scc.config] DEBUG Found remote.origin.url 2026-07-09 11:00:06,341 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-07-09 11:00:06,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-09 11:00:06,557 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-09 11:00:06,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-07-09 11:00:07,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-07-09 11:00:07,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-07-09 11:00:08,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-07-09 11:00:08,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-07-09 11:00:08,850 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:08,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:08,951 [ scc.git] DEBUG Resetting... 2026-07-09 11:00:08,951 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-07-09 11:00:09,291 [ scc.git] DEBUG HEAD is now at d22f8a6 merge master -Dorg -Snone 2026-07-09 11:00:09,292 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-07-09 11:00:09,673 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-07-09 11:00:10,036 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-07-09 11:00:11,112 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-07-09 11:00:11,773 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-07-09 11:00:12,066 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-07-09 11:00:12,480 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-07-09 11:00:12,775 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-07-09 11:00:13,037 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-07-09 11:00:13,238 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-07-09 11:00:13,696 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-07-09 11:00:13,717 [ scc.git] DEBUG Check current status 2026-07-09 11:00:13,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-07-09 11:00:13,738 [ scc.git] DEBUG d22f8a6 merge master -Dorg -Snone 2026-07-09 11:00:13,738 [ scc.git] DEBUG Calling 'git submodule status' 2026-07-09 11:00:13,917 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-07-09 11:00:13,952 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-07-09 11:00:13,990 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-07-09 11:00:14,024 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-07-09 11:00:14,060 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-07-09 11:00:14,093 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-07-09 11:00:14,129 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-07-09 11:00:14,167 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-07-09 11:00:14,207 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-07-09 11:00:14,243 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-07-09 11:00:14,280 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-07-09 11:00:14,318 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-07-09 11:00:14,354 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-07-09 11:00:14,391 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-07-09 11:00:14,428 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-07-09 11:00:14,466 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-07-09 11:00:14,499 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-07-09 11:00:14,528 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-07-09 11:00:14,555 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-07-09 11:00:14,581 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-07-09 11:00:14,607 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-07-09 11:00:14,623 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-07-09 11:00:14,624 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-07-09 11:00:14,624 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-07-09 11:00:14,624 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-07-09 11:00:14,624 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-07-09 11:00:14,624 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-07-09 11:00:14,624 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-07-09 11:00:14,624 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:00:14,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-07-09 11:00:15,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-07-09 11:00:15,453 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:00:16,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:16,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:17,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:17,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:00:17,850 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-09 11:00:18,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-07-09 11:00:18,330 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:00:18,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:19,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:20,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:20,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:00:20,589 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-09 11:00:21,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-07-09 11:00:21,128 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:00:21,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:22,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:22,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:23,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:00:23,342 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-09 11:00:23,342 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:00:23,342 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:23,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:23,354 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:00:23,371 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:00:23,371 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:00:23,393 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:00:23,442 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:23,443 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-07-09 11:00:23,883 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 11:00:23,883 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-07-09 11:00:23,911 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-07-09 11:00:24,353 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 11:00:24,353 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-07-09 11:00:24,377 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-07-09 11:00:24,805 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-07-09 11:00:24,805 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-07-09 11:00:24,831 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:00:24,831 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:24,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:24,842 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-09 11:00:24,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:24,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-07-09 11:00:24,929 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:25,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:00:25,118 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-09 11:00:25,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:25,155 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-07-09 11:00:25,206 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:25,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:00:25,572 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-09 11:00:25,595 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:25,606 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-07-09 11:00:25,651 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:26,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:00:26,018 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:00:26,761 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:26,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:26,769 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:00:27,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-07-09 11:00:27,015 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:00:27,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-09 11:00:27,015 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:27,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:27,029 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:00:27,045 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:00:27,045 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:00:27,065 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:00:27,118 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:27,119 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:00:27,119 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:27,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:27,135 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:00:27,250 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:27,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:27,264 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:27,366 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:00:27,422 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453afd3a10> has no local changes 2026-07-09 11:00:27,422 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:00:27,578 [ scc.git] DEBUG [detached HEAD 26351f7] merge master -Dorg -Ssuccess-only 2026-07-09 11:00:27,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:27,581 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:00:27,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-07-09 11:00:28,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-07-09 11:00:28,450 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:00:29,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:29,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:30,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:30,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:31,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:00:31,211 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:00:31,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-07-09 11:00:32,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-07-09 11:00:32,392 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:00:32,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-09 11:00:32,392 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:32,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:32,406 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:00:32,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:00:32,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:00:32,443 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:00:32,498 [ scc.git] DEBUG Already up to date. 2026-07-09 11:00:32,498 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-07-09 11:00:32,926 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-07-09 11:00:32,926 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-07-09 11:00:32,949 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:00:32,949 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:32,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:32,963 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-09 11:00:32,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:33,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-07-09 11:00:33,173 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:00:33,237 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:00:33,238 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:00:33,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:00:33,440 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:00:33,549 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:33,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:33,562 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:33,665 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:00:33,717 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453b06e350> has no local changes 2026-07-09 11:00:33,717 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:00:33,860 [ scc.git] DEBUG [detached HEAD c58f1ee] merge master -Dorg -Ssuccess-only 2026-07-09 11:00:33,862 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:33,862 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:00:34,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-07-09 11:00:34,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-07-09 11:00:35,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-07-09 11:00:35,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:36,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:36,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:37,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:37,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:00:37,912 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-07-09 11:00:38,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-07-09 11:00:38,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-07-09 11:00:38,938 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:00:38,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-09 11:00:38,938 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:38,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:38,955 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:00:38,973 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:00:38,973 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:00:38,998 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:00:39,202 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-07-09 11:00:39,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-07-09 11:00:40,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-07-09 11:00:41,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-07-09 11:00:42,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-07-09 11:00:42,320 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-07-09 11:00:42,978 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-07-09 11:00:42,978 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-07-09 11:00:43,003 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:00:43,004 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:43,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:43,017 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-09 11:00:43,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:43,075 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-07-09 11:00:43,230 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-07-09 11:00:43,302 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:00:43,364 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-07-09 11:00:43,364 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-07-09 11:00:43,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:00:43,576 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:00:43,704 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:00:43,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:00:43,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:00:43,824 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:00:43,874 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453b0c5ad0> has no local changes 2026-07-09 11:00:43,874 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:00:44,002 [ scc.git] DEBUG [detached HEAD 0775cf6] merge master -Dorg -Ssuccess-only 2026-07-09 11:00:44,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:00:44,004 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:00:44,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-07-09 11:00:45,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-07-09 11:00:45,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:46,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/4b6b6631fecc40049c3c8721846ed61c7868a1de/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:47,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-07-09 11:00:47,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:48,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:48,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:49,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-07-09 11:00:49,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:50,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:50,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:51,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:51,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:52,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:52,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-07-09 11:00:52,922 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-07-09 11:00:53,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-07-09 11:00:53,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-07-09 11:00:54,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:55,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:55,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:00:56,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:56,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-07-09 11:00:57,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-07-09 11:00:57,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-07-09 11:00:57,792 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-09 11:00:58,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-07-09 11:00:58,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-07-09 11:00:59,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-07-09 11:00:59,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-07-09 11:01:00,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:00,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:01,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:01:01,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:02,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:02,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:03,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-07-09 11:01:03,374 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-09 11:01:03,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-07-09 11:01:04,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-07-09 11:01:04,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:05,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:06,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:01:06,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:07,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:07,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:08,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-07-09 11:01:08,096 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-07-09 11:01:08,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-07-09 11:01:09,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-07-09 11:01:09,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-07-09 11:01:10,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-07-09 11:01:10,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-07-09 11:01:11,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-07-09 11:01:11,241 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:01:11,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-09 11:01:11,242 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:01:11,242 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:11,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:01:11,276 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:01:11,276 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:01:11,380 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:01:11,741 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-07-09 11:01:12,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-07-09 11:01:13,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-07-09 11:01:13,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-07-09 11:01:14,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-07-09 11:01:15,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-07-09 11:01:16,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-07-09 11:01:17,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-07-09 11:01:18,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-07-09 11:01:19,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-07-09 11:01:20,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-07-09 11:01:21,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-07-09 11:01:21,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-07-09 11:01:21,978 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-07-09 11:01:22,750 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-09 11:01:22,750 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-07-09 11:01:22,776 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-07-09 11:01:23,280 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-09 11:01:23,280 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-07-09 11:01:23,301 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-07-09 11:01:23,750 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-09 11:01:23,750 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-07-09 11:01:23,772 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-07-09 11:01:24,194 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-07-09 11:01:24,194 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-07-09 11:01:24,218 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:01:24,218 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:01:24,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:24,249 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-09 11:01:24,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:24,314 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging README.rst 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-09 11:01:24,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-09 11:01:24,725 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:01:24,726 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:01:24,763 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:24,949 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-09 11:01:25,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:01:25,164 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-07-09 11:01:25,197 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:25,214 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - src/omero_zarr/util.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py --conflicts 2026-07-09 11:01:25,225 [ scc.config] DEBUG Found github.token 2026-07-09 11:01:25,225 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-07-09 11:01:25,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-09 11:01:25,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:25,273 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-09 11:01:25,468 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-07-09 11:01:25,468 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-07-09 11:01:25,468 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-07-09 11:01:25,468 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-07-09 11:01:25,490 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:01:25,491 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:01:25,515 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:25,641 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-09 11:01:25,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:01:25,937 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-07-09 11:01:25,964 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:25,981 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-07-09 11:01:25,992 [ scc.config] DEBUG Found github.token 2026-07-09 11:01:25,992 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-07-09 11:01:25,992 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-09 11:01:26,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:26,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-09 11:01:26,260 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-07-09 11:01:26,260 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-07-09 11:01:26,260 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-07-09 11:01:26,260 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-07-09 11:01:26,260 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-07-09 11:01:26,281 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:01:26,282 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:01:26,310 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:26,464 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-07-09 11:01:26,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:01:26,667 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-07-09 11:01:26,696 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-07-09 11:01:26,714 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-07-09 11:01:26,725 [ scc.config] DEBUG Found github.token 2026-07-09 11:01:26,726 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-07-09 11:01:26,726 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-09 11:01:26,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:26,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-07-09 11:01:26,981 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:01:27,045 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-07-09 11:01:27,046 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-07-09 11:01:27,046 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-07-09 11:01:27,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:01:27,238 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:01:27,350 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:01:27,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:27,364 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:01:27,469 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:01:27,529 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453b318d10> has no local changes 2026-07-09 11:01:27,529 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:01:27,652 [ scc.git] DEBUG [detached HEAD d699d41] merge master -Dorg -Ssuccess-only 2026-07-09 11:01:27,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:01:27,654 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:01:28,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-07-09 11:01:28,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/694 HTTP/1.1" 200 None 2026-07-09 11:01:28,584 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:01:29,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:29,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:30,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:01:30,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ed470277e5ac8780e9692b8170dd3204e04fcacb?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:31,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ed470277e5ac8780e9692b8170dd3204e04fcacb?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:01:31,429 [ scc.repo] DEBUG - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11' 2026-07-09 11:01:31,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-07-09 11:01:32,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:33,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:33,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:01:34,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:34,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:01:34,573 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-07-09 11:01:35,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-07-09 11:01:35,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-07-09 11:01:35,552 [ scc.repo] DEBUG # ... Include label: include 2026-07-09 11:01:36,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:36,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:01:37,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:01:37,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-07-09 11:01:38,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:01:38,195 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-09 11:01:38,195 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:01:38,195 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-09 11:01:38,196 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:01:38,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:01:38,212 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:01:38,230 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:01:38,230 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:01:38,312 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:01:39,571 [ scc.git] DEBUG Updating 9cc36cde..18887279 2026-07-09 11:01:40,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-07-09 11:01:41,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-07-09 11:01:41,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-07-09 11:01:42,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-07-09 11:01:43,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-07-09 11:01:44,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-07-09 11:01:45,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-07-09 11:01:45,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-07-09 11:01:46,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-07-09 11:01:47,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-07-09 11:01:48,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-07-09 11:01:49,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-07-09 11:01:50,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-07-09 11:01:50,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-07-09 11:01:51,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-07-09 11:01:52,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-07-09 11:01:53,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-07-09 11:01:54,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-07-09 11:01:55,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-07-09 11:02:00,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-07-09 11:02:01,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-07-09 11:02:05,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-07-09 11:02:06,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-07-09 11:02:07,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-07-09 11:02:08,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-07-09 11:02:09,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-07-09 11:02:10,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-07-09 11:02:11,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-07-09 11:02:12,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-07-09 11:02:13,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-07-09 11:02:14,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-07-09 11:02:14,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-07-09 11:02:15,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-07-09 11:02:16,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-07-09 11:02:17,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-07-09 11:02:18,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-07-09 11:02:19,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-07-09 11:02:20,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-07-09 11:02:20,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-07-09 11:02:21,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-07-09 11:02:22,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-07-09 11:02:23,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-07-09 11:02:24,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-07-09 11:02:25,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-07-09 11:02:26,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-07-09 11:02:27,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-07-09 11:02:28,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-07-09 11:02:28,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-07-09 11:02:29,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-07-09 11:02:31,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-07-09 11:02:31,494 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-07-09 11:02:32,198 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-09 11:02:32,198 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-07-09 11:02:32,222 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-07-09 11:02:32,644 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-09 11:02:32,644 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-07-09 11:02:32,665 [ scc.git] DEBUG Calling 'git fetch origin pull/694/head' 2026-07-09 11:02:33,037 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-07-09 11:02:33,037 [ scc.git] DEBUG * branch refs/pull/694/head -> FETCH_HEAD 2026-07-09 11:02:33,059 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:02:33,059 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:02:33,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:33,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-09 11:02:33,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:33,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-07-09 11:02:33,506 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-07-09 11:02:33,506 [ scc.git] DEBUG Auto-merging src/index.html 2026-07-09 11:02:33,506 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-07-09 11:02:33,579 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:02:33,664 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-07-09 11:02:33,664 [ scc.git] DEBUG src/index.html | 11 ++ 2026-07-09 11:02:33,664 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-07-09 11:02:33,664 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-07-09 11:02:33,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:02:33,931 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-09 11:02:33,975 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:33,987 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-07-09 11:02:34,225 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:02:34,298 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-07-09 11:02:34,298 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-07-09 11:02:34,298 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-07-09 11:02:34,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:02:34,629 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed470277e5ac8780e9692b8170dd3204e04fcacb' 2026-07-09 11:02:34,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:34,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 694 (Bump dompurify from 3.4.9 to 3.4.11) ed470277e5ac8780e9692b8170dd3204e04fcacb' 2026-07-09 11:02:34,929 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:02:34,989 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2026-07-09 11:02:34,989 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:02:34,989 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2026-07-09 11:02:35,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:02:35,337 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:02:35,456 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:02:35,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:35,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:02:35,573 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:02:35,682 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453dd13d90> has no local changes 2026-07-09 11:02:35,682 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:02:35,814 [ scc.git] DEBUG [detached HEAD be03e5de] merge master -Dorg -Ssuccess-only 2026-07-09 11:02:35,815 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:02:35,815 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:02:36,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-07-09 11:02:36,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-07-09 11:02:36,905 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:02:37,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:38,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:38,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:02:39,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:39,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:39,910 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:02:40,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-07-09 11:02:40,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-07-09 11:02:41,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:41,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:42,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:42,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:42,914 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-07-09 11:02:42,914 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:02:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-09 11:02:42,915 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:02:42,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:42,932 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:02:42,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:02:42,950 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:02:42,968 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:02:43,019 [ scc.git] DEBUG Already up to date. 2026-07-09 11:02:43,019 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-07-09 11:02:43,460 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-09 11:02:43,461 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-07-09 11:02:43,486 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-07-09 11:02:43,870 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-07-09 11:02:43,870 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-07-09 11:02:43,890 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:02:43,890 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:02:43,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:43,903 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-09 11:02:43,930 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:43,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-07-09 11:02:44,069 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-07-09 11:02:44,136 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:02:44,192 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-07-09 11:02:44,192 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-07-09 11:02:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:02:44,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-09 11:02:44,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:44,586 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-07-09 11:02:44,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:02:44,816 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:02:44,816 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:02:45,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:02:45,022 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:02:45,127 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:02:45,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:02:45,138 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:02:45,243 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:02:45,295 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453adeeb50> has no local changes 2026-07-09 11:02:45,295 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:02:45,417 [ scc.git] DEBUG [detached HEAD 510c3b9] merge master -Dorg -Ssuccess-only 2026-07-09 11:02:45,418 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:02:45,418 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:02:45,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-07-09 11:02:46,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-07-09 11:02:46,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-07-09 11:02:47,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-07-09 11:02:47,368 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:02:48,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:48,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:49,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:49,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:49,965 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-09 11:02:50,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-07-09 11:02:51,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-07-09 11:02:51,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-07-09 11:02:51,536 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:02:52,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:52,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:53,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:53,676 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-09 11:02:54,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-07-09 11:02:54,176 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:02:54,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:55,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:55,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:56,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:56,404 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-09 11:02:56,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-07-09 11:02:56,949 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:02:57,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:58,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:02:58,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-07-09 11:02:59,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:02:59,114 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-09 11:02:59,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-07-09 11:03:00,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-07-09 11:03:00,126 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:00,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:01,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:01,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:02,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:02,278 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-09 11:03:02,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-07-09 11:03:02,776 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:03,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:03,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:04,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:05,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:05,103 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-09 11:03:05,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-07-09 11:03:05,567 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:06,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:06,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:07,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:07,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:07,666 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-09 11:03:07,666 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:03:07,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-09 11:03:07,667 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:03:07,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:07,683 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:03:07,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:03:07,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:03:07,720 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:03:07,768 [ scc.git] DEBUG Already up to date. 2026-07-09 11:03:07,769 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-07-09 11:03:08,173 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:08,173 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-07-09 11:03:08,194 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-07-09 11:03:08,601 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:08,601 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-07-09 11:03:08,621 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-07-09 11:03:09,020 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:09,020 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-07-09 11:03:09,041 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-07-09 11:03:09,450 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:09,450 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-07-09 11:03:09,473 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-07-09 11:03:09,876 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:09,876 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-07-09 11:03:09,897 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-07-09 11:03:10,282 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:10,282 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-07-09 11:03:10,303 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-07-09 11:03:10,698 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-07-09 11:03:10,698 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-07-09 11:03:10,724 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:03:10,724 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:03:10,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:10,738 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-09 11:03:10,759 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:10,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-07-09 11:03:10,972 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:03:11,038 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-09 11:03:11,038 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-09 11:03:11,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:11,237 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-09 11:03:11,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:11,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-07-09 11:03:11,416 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:11,499 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:03:11,559 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-07-09 11:03:11,559 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-07-09 11:03:11,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:11,754 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-09 11:03:11,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:11,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-09 11:03:11,950 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:11,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-09 11:03:11,977 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:03:11,978 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:03:12,010 [ scc.git] DEBUG Calling 'git reset --hard 4532874df40c15e7bc42997adca6a6e2895c3419' 2026-07-09 11:03:12,157 [ scc.git] DEBUG HEAD is now at 4532874 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-07-09 11:03:12,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:12,357 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-07-09 11:03:12,381 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-09 11:03:12,400 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-07-09 11:03:12,412 [ scc.config] DEBUG Found github.token 2026-07-09 11:03:12,412 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-07-09 11:03:12,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-09 11:03:12,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:12,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-07-09 11:03:12,616 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:12,685 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:03:12,746 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-07-09 11:03:12,746 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-07-09 11:03:12,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:12,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-09 11:03:12,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:12,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-07-09 11:03:13,117 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:13,192 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:03:13,259 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-07-09 11:03:13,259 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-07-09 11:03:13,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:13,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-09 11:03:13,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:13,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-09 11:03:13,674 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:13,674 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-09 11:03:13,701 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:03:13,702 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:03:13,735 [ scc.git] DEBUG Calling 'git reset --hard 1f1ea3527b6877c4c455a3d14a0e547b637355ee' 2026-07-09 11:03:13,882 [ scc.git] DEBUG HEAD is now at 1f1ea35 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-09 11:03:14,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:14,219 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-07-09 11:03:14,238 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-09 11:03:14,253 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-07-09 11:03:14,265 [ scc.config] DEBUG Found github.token 2026-07-09 11:03:14,265 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-07-09 11:03:14,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-09 11:03:14,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:14,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-09 11:03:14,478 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:03:14,479 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-09 11:03:14,505 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:03:14,506 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:03:14,536 [ scc.git] DEBUG Calling 'git reset --hard 1f1ea3527b6877c4c455a3d14a0e547b637355ee' 2026-07-09 11:03:14,671 [ scc.git] DEBUG HEAD is now at 1f1ea35 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-07-09 11:03:14,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:03:14,872 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-07-09 11:03:14,891 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-07-09 11:03:14,920 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-07-09 11:03:14,930 [ scc.config] DEBUG Found github.token 2026-07-09 11:03:14,930 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-07-09 11:03:14,931 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:03:15,030 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:03:15,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:03:15,043 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:03:15,142 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:03:15,205 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae0bbd0> has no local changes 2026-07-09 11:03:15,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:03:15,328 [ scc.git] DEBUG [detached HEAD 0ba5b1f] merge master -Dorg -Ssuccess-only 2026-07-09 11:03:15,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:03:15,329 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:03:15,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-07-09 11:03:16,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/546 HTTP/1.1" 200 None 2026-07-09 11:03:16,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:17,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:17,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:18,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:18,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/cf1523e8c6e3d91d8b862eb49a5b679caa796c78?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:18,912 [ scc.repo] DEBUG - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-09 11:03:19,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544 HTTP/1.1" 200 None 2026-07-09 11:03:19,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/544/comments HTTP/1.1" 200 None 2026-07-09 11:03:19,905 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:20,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:21,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:21,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:22,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b9d6befc6684104960c2906702c2eb687dc1e851?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:22,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b9d6befc6684104960c2906702c2eb687dc1e851?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:22,706 [ scc.repo] DEBUG - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-09 11:03:23,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/543 HTTP/1.1" 200 None 2026-07-09 11:03:23,245 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:23,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:24,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:24,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:25,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/94c91a556df29d493ef65c47a023f6de724c0004?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:25,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/94c91a556df29d493ef65c47a023f6de724c0004?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:25,991 [ scc.repo] DEBUG - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' 2026-07-09 11:03:26,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/541 HTTP/1.1" 200 None 2026-07-09 11:03:27,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:27,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:28,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:28,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/83cb921ccbf7bc394ef317de7cb767468ae7eaad?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:29,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/83cb921ccbf7bc394ef317de7cb767468ae7eaad?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:29,119 [ scc.repo] DEBUG - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-09 11:03:29,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/540 HTTP/1.1" 200 None 2026-07-09 11:03:29,612 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:30,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:31,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:31,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:32,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c568a324264b0d49ff3d53f75024eca7482de94b?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:32,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c568a324264b0d49ff3d53f75024eca7482de94b?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:32,638 [ scc.repo] DEBUG - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-09 11:03:33,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/539 HTTP/1.1" 200 None 2026-07-09 11:03:33,213 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:33,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:34,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:35,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:35,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:36,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0f0014ac7a6b5a5423c4d298541516407fd6d3cb?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:36,027 [ scc.repo] DEBUG - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-09 11:03:36,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/537 HTTP/1.1" 200 None 2026-07-09 11:03:36,534 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:37,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:37,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:38,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:38,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/16a64815dd14cc424f6ac8b24630b37ccfd0c282?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:39,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/16a64815dd14cc424f6ac8b24630b37ccfd0c282?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:39,253 [ scc.repo] DEBUG - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-09 11:03:39,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/536 HTTP/1.1" 200 None 2026-07-09 11:03:39,749 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:40,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:40,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:41,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:42,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:42,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9e3d6f94ebb795775ec87353d3d2bb4d678e6e51?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:42,489 [ scc.repo] DEBUG - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4' 2026-07-09 11:03:42,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535 HTTP/1.1" 200 None 2026-07-09 11:03:42,985 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:03:43,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:44,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:44,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:45,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:45,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46500d0a497fc9945eeca87fd36672b2bf8d6e79?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:45,759 [ scc.repo] DEBUG - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-09 11:03:46,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-07-09 11:03:46,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-07-09 11:03:47,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:47,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:48,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:48,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/c7486c99bcafcc13a371ace8662ade061c1eccf8?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:49,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/c7486c99bcafcc13a371ace8662ade061c1eccf8?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:49,274 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-07-09 11:03:49,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-07-09 11:03:50,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-07-09 11:03:50,317 [ scc.repo] DEBUG # ... Include label: include 2026-07-09 11:03:50,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:51,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:52,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/71de5adbbf9910cefb3e4a49bff107673d9b5527/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:03:52,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-07-09 11:03:53,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-07-09 11:03:53,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-07-09 11:03:54,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-07-09 11:03:54,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-07-09 11:03:55,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-07-09 11:03:55,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-07-09 11:03:55,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-07-09 11:03:56,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-07-09 11:03:57,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:57,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:03:58,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-07-09 11:03:58,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:03:58,519 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-09 11:03:58,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-07-09 11:03:59,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-07-09 11:04:00,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:00,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:01,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:01,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a081a9f2892763bd49a7ad7ba425965150e76f97?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:01,550 [ scc.repo] DEBUG - PR 227 will-moore 'Vectortile investigation' 2026-07-09 11:04:01,551 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:04:01,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-09 11:04:01,552 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:01,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:01,573 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:04:01,594 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:04:01,594 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:04:01,661 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:04:02,180 [ scc.git] DEBUG Updating 7a798cee..cae0b026 2026-07-09 11:04:02,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-07-09 11:04:03,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-07-09 11:04:04,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-07-09 11:04:05,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-07-09 11:04:06,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-07-09 11:04:06,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-07-09 11:04:07,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-07-09 11:04:08,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-07-09 11:04:09,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-07-09 11:04:10,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-07-09 11:04:10,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-07-09 11:04:11,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-07-09 11:04:12,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-07-09 11:04:13,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-07-09 11:04:14,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-07-09 11:04:15,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-07-09 11:04:15,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-07-09 11:04:16,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-07-09 11:04:17,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-07-09 11:04:18,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-07-09 11:04:19,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-07-09 11:04:19,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-07-09 11:04:19,999 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2026-07-09 11:04:20,410 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:20,410 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2026-07-09 11:04:20,433 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-07-09 11:04:20,856 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:20,856 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-07-09 11:04:20,874 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-07-09 11:04:21,282 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:21,282 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-07-09 11:04:21,300 [ scc.git] DEBUG Calling 'git fetch origin pull/535/head' 2026-07-09 11:04:21,687 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:21,687 [ scc.git] DEBUG * branch refs/pull/535/head -> FETCH_HEAD 2026-07-09 11:04:21,705 [ scc.git] DEBUG Calling 'git fetch origin pull/536/head' 2026-07-09 11:04:22,072 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:22,072 [ scc.git] DEBUG * branch refs/pull/536/head -> FETCH_HEAD 2026-07-09 11:04:22,091 [ scc.git] DEBUG Calling 'git fetch origin pull/537/head' 2026-07-09 11:04:22,478 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:22,478 [ scc.git] DEBUG * branch refs/pull/537/head -> FETCH_HEAD 2026-07-09 11:04:22,499 [ scc.git] DEBUG Calling 'git fetch origin pull/539/head' 2026-07-09 11:04:22,903 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:22,903 [ scc.git] DEBUG * branch refs/pull/539/head -> FETCH_HEAD 2026-07-09 11:04:22,923 [ scc.git] DEBUG Calling 'git fetch origin pull/540/head' 2026-07-09 11:04:23,313 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:23,313 [ scc.git] DEBUG * branch refs/pull/540/head -> FETCH_HEAD 2026-07-09 11:04:23,334 [ scc.git] DEBUG Calling 'git fetch origin pull/541/head' 2026-07-09 11:04:23,778 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:23,778 [ scc.git] DEBUG * branch refs/pull/541/head -> FETCH_HEAD 2026-07-09 11:04:23,802 [ scc.git] DEBUG Calling 'git fetch origin pull/543/head' 2026-07-09 11:04:24,185 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:24,185 [ scc.git] DEBUG * branch refs/pull/543/head -> FETCH_HEAD 2026-07-09 11:04:24,206 [ scc.git] DEBUG Calling 'git fetch origin pull/544/head' 2026-07-09 11:04:24,587 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:24,587 [ scc.git] DEBUG * branch refs/pull/544/head -> FETCH_HEAD 2026-07-09 11:04:24,607 [ scc.git] DEBUG Calling 'git fetch origin pull/546/head' 2026-07-09 11:04:25,025 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-07-09 11:04:25,025 [ scc.git] DEBUG * branch refs/pull/546/head -> FETCH_HEAD 2026-07-09 11:04:25,048 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:04:25,048 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:25,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:25,060 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-07-09 11:04:25,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:25,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Vectortile investigation) a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-07-09 11:04:25,483 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-07-09 11:04:25,483 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-07-09 11:04:25,483 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-07-09 11:04:25,575 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:25,668 [ scc.git] DEBUG plugin/omero_iviewer/urls.py | 7 +- 2026-07-09 11:04:25,668 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 88 ++++++++++ 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/events/events.js | 2 + 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/model/regions_info.js | 37 +++- 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/regions/regions-list.js | 26 +++ 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/utils/constants.js | 6 + 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 48 +++++- 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 78 +++++++-- 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/format/OmeJSON.js | 79 +++++++++ 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/source/Regions.js | 56 ++++++ 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/source/TiledRegions.js | 277 ++++++++++++++++++++++++++++++ 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/utils/Regions.js | 51 ++++-- 2026-07-09 11:04:25,668 [ scc.git] DEBUG src/viewers/viewer/utils/Style.js | 19 +- 2026-07-09 11:04:25,668 [ scc.git] DEBUG 13 files changed, 727 insertions(+), 47 deletions(-) 2026-07-09 11:04:25,668 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/format/OmeJSON.js 2026-07-09 11:04:25,669 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/source/TiledRegions.js 2026-07-09 11:04:25,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:25,867 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-09 11:04:25,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:25,924 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-07-09 11:04:26,151 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-07-09 11:04:26,220 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:26,292 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-07-09 11:04:26,292 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-07-09 11:04:26,292 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-07-09 11:04:26,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:26,482 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c7486c99bcafcc13a371ace8662ade061c1eccf8' 2026-07-09 11:04:26,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:26,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) c7486c99bcafcc13a371ace8662ade061c1eccf8' 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging package.json 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/events/events.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/viewers/viewer/Viewer.js 2026-07-09 11:04:27,140 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-07-09 11:04:27,164 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:04:27,167 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:04:27,220 [ scc.git] DEBUG Calling 'git reset --hard 6f80cc8bcd036a0fb93dec5303c6d25bba5f2e62' 2026-07-09 11:04:27,569 [ scc.git] DEBUG HEAD is now at 6f80cc8b merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-07-09 11:04:27,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:27,757 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 c7486c99bcafcc13a371ace8662ade061c1eccf8' 2026-07-09 11:04:27,778 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-09 11:04:27,796 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #227 will-moore 'Vectortile investigation' - src/viewers/viewer/Viewer.js --conflicts 2026-07-09 11:04:27,806 [ scc.config] DEBUG Found github.token 2026-07-09 11:04:27,806 [ scc.git] DEBUG Adding comment to issue #532. 2026-07-09 11:04:28,689 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 201 2054 2026-07-09 11:04:28,689 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-09 11:04:28,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:28,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 535 (Bump tmp and eslint) 46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-07-09 11:04:29,050 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:29,122 [ scc.git] DEBUG package-lock.json | 2238 +++++++++++++++++++++-------------------------------- 2026-07-09 11:04:29,122 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:04:29,122 [ scc.git] DEBUG 2 files changed, 869 insertions(+), 1371 deletions(-) 2026-07-09 11:04:29,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:29,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9e3d6f94ebb795775ec87353d3d2bb4d678e6e51' 2026-07-09 11:04:29,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:29,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 536 (Bump shell-quote from 1.8.3 to 1.8.4) 9e3d6f94ebb795775ec87353d3d2bb4d678e6e51' 2026-07-09 11:04:29,556 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:29,634 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:29,709 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-07-09 11:04:29,709 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-07-09 11:04:29,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:29,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-09 11:04:29,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:29,937 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 537 (Bump launch-editor from 2.13.2 to 2.14.1) 16a64815dd14cc424f6ac8b24630b37ccfd0c282' 2026-07-09 11:04:30,140 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:30,210 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:30,284 [ scc.git] DEBUG package-lock.json | 16 ++++++++-------- 2026-07-09 11:04:30,284 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 8 deletions(-) 2026-07-09 11:04:30,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:30,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-09 11:04:30,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:30,567 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 539 (Bump ws, engine.io and socket.io-adapter) 0f0014ac7a6b5a5423c4d298541516407fd6d3cb' 2026-07-09 11:04:30,794 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:30,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:30,945 [ scc.git] DEBUG package-lock.json | 44 ++++++++++++++++++++++---------------------- 2026-07-09 11:04:30,945 [ scc.git] DEBUG 1 file changed, 22 insertions(+), 22 deletions(-) 2026-07-09 11:04:31,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:31,136 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-09 11:04:31,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:31,196 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 540 (Bump @babel/core from 7.5.4 to 7.29.6) c568a324264b0d49ff3d53f75024eca7482de94b' 2026-07-09 11:04:31,437 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:31,437 [ scc.git] DEBUG Auto-merging package.json 2026-07-09 11:04:31,522 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:31,604 [ scc.git] DEBUG package-lock.json | 667 +++++++++++++++++++++++++++++++----------------------- 2026-07-09 11:04:31,604 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:04:31,604 [ scc.git] DEBUG 2 files changed, 389 insertions(+), 280 deletions(-) 2026-07-09 11:04:31,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:31,801 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-09 11:04:31,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:31,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 541 (Only add channel to tile request string if active) 83cb921ccbf7bc394ef317de7cb767468ae7eaad' 2026-07-09 11:04:32,136 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:32,220 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 49 ++++++++++++++++++++------------------ 2026-07-09 11:04:32,220 [ scc.git] DEBUG 1 file changed, 26 insertions(+), 23 deletions(-) 2026-07-09 11:04:32,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:32,419 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...94c91a556df29d493ef65c47a023f6de724c0004' 2026-07-09 11:04:32,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:32,491 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5) 94c91a556df29d493ef65c47a023f6de724c0004' 2026-07-09 11:04:32,681 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:32,681 [ scc.git] DEBUG Auto-merging package.json 2026-07-09 11:04:32,771 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:32,842 [ scc.git] DEBUG package-lock.json | 14 +++++++------- 2026-07-09 11:04:32,842 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:04:32,842 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 8 deletions(-) 2026-07-09 11:04:33,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:33,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-09 11:04:33,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:33,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 544 (Bump js-yaml, mocha and eslint) b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-09 11:04:33,402 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:04:33,402 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-07-09 11:04:33,402 [ scc.git] DEBUG Auto-merging package.json 2026-07-09 11:04:33,402 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package.json 2026-07-09 11:04:33,430 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:04:33,433 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:04:33,465 [ scc.git] DEBUG Calling 'git reset --hard a62e3284c5174c5b1f9ef10d87435da67d79ba89' 2026-07-09 11:04:33,632 [ scc.git] DEBUG HEAD is now at a62e3284 merge master -Dorg -Ssuccess-only: PR 543 (Bump webpack-dev-server from 5.2.4 to 5.2.5) 2026-07-09 11:04:33,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:33,824 [ scc.git] DEBUG Calling 'git merge-base cae0b0260125ca856c05b4ac7d723879827a6e76 b9d6befc6684104960c2906702c2eb687dc1e851' 2026-07-09 11:04:33,850 [ scc.git] DEBUG Calling 'git diff --name-only cae0b0260125ca856c05b4ac7d723879827a6e76..cae0b0260125ca856c05b4ac7d723879827a6e76' 2026-07-09 11:04:33,869 [ scc.git] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #532 will-moore 'Zarr layers' - package.json - package-lock.json - PR #535 dependabot[bot] 'Bump tmp and eslint' - package.json - package-lock.json - PR #536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4' - package-lock.json - PR #537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - package-lock.json - PR #539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - package-lock.json - PR #540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - package.json - package-lock.json - PR #543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - package.json - package-lock.json --conflicts 2026-07-09 11:04:33,881 [ scc.config] DEBUG Found github.token 2026-07-09 11:04:33,881 [ scc.git] DEBUG Not adding comment to issue #544, already --conflicts. 2026-07-09 11:04:33,881 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-09 11:04:33,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:33,944 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 546 (Use POST data for saveImgRdef params) cf1523e8c6e3d91d8b862eb49a5b679caa796c78' 2026-07-09 11:04:34,183 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:34,251 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-07-09 11:04:34,251 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 3 deletions(-) 2026-07-09 11:04:34,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:34,450 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:04:34,559 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:34,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:34,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:04:34,671 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:04:34,747 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae1c350> has no local changes 2026-07-09 11:04:34,747 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required) - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 471 will-moore 'Z projection disabled tooltip' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:04:34,884 [ scc.git] DEBUG [detached HEAD a6730e34] merge master -Dorg -Ssuccess-only 2026-07-09 11:04:34,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:04:34,886 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:04:35,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-07-09 11:04:35,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-07-09 11:04:36,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-07-09 11:04:36,263 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:04:36,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:37,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:38,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:04:38,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:39,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:39,126 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:04:39,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-07-09 11:04:40,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:40,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:41,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:41,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:41,625 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:04:42,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-07-09 11:04:42,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-07-09 11:04:43,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:43,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:44,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:44,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:44,666 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-07-09 11:04:44,667 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:04:44,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-09 11:04:44,668 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:44,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:44,687 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:04:44,708 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:04:44,708 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:04:44,731 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:04:44,790 [ scc.git] DEBUG Already up to date. 2026-07-09 11:04:44,790 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-09 11:04:45,207 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-09 11:04:45,207 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-09 11:04:45,232 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-07-09 11:04:45,688 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-09 11:04:45,688 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-07-09 11:04:45,711 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-07-09 11:04:46,124 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-07-09 11:04:46,124 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-07-09 11:04:46,145 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:04:46,145 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:46,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:46,157 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-09 11:04:46,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:46,195 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-07-09 11:04:46,416 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:46,476 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-07-09 11:04:46,476 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-07-09 11:04:46,476 [ scc.git] DEBUG requirements.txt | 2 +- 2026-07-09 11:04:46,476 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-07-09 11:04:46,476 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-07-09 11:04:46,476 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-07-09 11:04:46,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:46,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-09 11:04:46,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:46,705 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-07-09 11:04:46,893 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:04:46,957 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:04:46,958 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:04:47,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:47,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-09 11:04:47,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:47,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-09 11:04:47,383 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-07-09 11:04:47,383 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-07-09 11:04:47,411 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:04:47,412 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:04:47,438 [ scc.git] DEBUG Calling 'git reset --hard 5da8bf2c5ee35c907a81025d509cc6da809c0d28' 2026-07-09 11:04:47,577 [ scc.git] DEBUG HEAD is now at 5da8bf2 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-07-09 11:04:47,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:04:47,782 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-07-09 11:04:47,805 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-07-09 11:04:47,822 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-07-09 11:04:47,832 [ scc.config] DEBUG Found github.token 2026-07-09 11:04:47,832 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-07-09 11:04:47,833 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:04:47,942 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:47,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:47,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:04:48,055 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:04:48,126 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae5f3d0> has no local changes 2026-07-09 11:04:48,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:04:48,269 [ scc.git] DEBUG [detached HEAD e03f538] merge master -Dorg -Ssuccess-only 2026-07-09 11:04:48,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:04:48,271 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:04:48,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-07-09 11:04:49,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-07-09 11:04:49,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-07-09 11:04:50,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:50,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:51,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:51,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:51,763 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-09 11:04:52,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-07-09 11:04:52,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-07-09 11:04:53,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:53,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:54,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:54,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:54,846 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-09 11:04:55,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-07-09 11:04:55,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-07-09 11:04:56,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:56,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:04:57,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-07-09 11:04:57,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:04:57,882 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-09 11:04:57,882 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:04:57,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-09 11:04:57,883 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:04:57,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:04:57,903 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:04:57,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:04:57,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:04:57,944 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:04:58,078 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-07-09 11:04:58,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-07-09 11:04:58,687 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-07-09 11:04:59,280 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-09 11:04:59,280 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-07-09 11:04:59,305 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-07-09 11:04:59,899 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-09 11:04:59,900 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-07-09 11:04:59,924 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-07-09 11:05:00,337 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-07-09 11:05:00,337 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-07-09 11:05:00,359 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:00,359 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:00,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:00,373 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-09 11:05:00,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:00,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-09 11:05:00,681 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-07-09 11:05:00,681 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-07-09 11:05:00,681 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-09 11:05:00,681 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-09 11:05:00,707 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:05:00,708 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:05:00,733 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-09 11:05:00,894 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-09 11:05:01,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:01,094 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-07-09 11:05:01,125 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-09 11:05:01,147 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-07-09 11:05:01,159 [ scc.config] DEBUG Found github.token 2026-07-09 11:05:01,159 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-07-09 11:05:01,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-09 11:05:01,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:01,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-09 11:05:01,467 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-07-09 11:05:01,467 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-07-09 11:05:01,467 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-07-09 11:05:01,492 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:05:01,493 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:05:01,521 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-09 11:05:01,680 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-07-09 11:05:01,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:01,873 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-07-09 11:05:01,909 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-07-09 11:05:01,929 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-07-09 11:05:01,941 [ scc.config] DEBUG Found github.token 2026-07-09 11:05:01,941 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-07-09 11:05:01,941 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-09 11:05:01,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:01,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-07-09 11:05:02,184 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:02,245 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-07-09 11:05:02,245 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-07-09 11:05:02,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:02,439 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:02,546 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:02,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:02,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:02,667 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:02,726 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae220d0> has no local changes 2026-07-09 11:05:02,726 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:02,870 [ scc.git] DEBUG [detached HEAD c11c984] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:02,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:02,871 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:03,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-07-09 11:05:03,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-07-09 11:05:04,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:04,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:05,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:05,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:05,857 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:05:06,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-07-09 11:05:06,351 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:07,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:07,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:08,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:08,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:08,502 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-09 11:05:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-07-09 11:05:09,017 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:09,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:10,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:10,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:11,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:11,171 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-09 11:05:11,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-07-09 11:05:12,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-07-09 11:05:12,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-07-09 11:05:13,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-07-09 11:05:13,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-07-09 11:05:14,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-07-09 11:05:14,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-07-09 11:05:14,701 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:14,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-09 11:05:14,702 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:14,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:14,721 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:14,737 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:14,737 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:14,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:14,807 [ scc.git] DEBUG Already up to date. 2026-07-09 11:05:14,807 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-07-09 11:05:15,215 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-09 11:05:15,215 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-07-09 11:05:15,237 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-07-09 11:05:15,635 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-09 11:05:15,635 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-07-09 11:05:15,656 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-07-09 11:05:16,088 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-07-09 11:05:16,088 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-07-09 11:05:16,111 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:16,111 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:16,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:16,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-09 11:05:16,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:16,179 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-07-09 11:05:16,390 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:16,458 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-07-09 11:05:16,458 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:05:16,458 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-07-09 11:05:16,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:16,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-07-09 11:05:16,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:16,737 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-07-09 11:05:16,883 [ scc.git] DEBUG Auto-merging package-lock.json 2026-07-09 11:05:16,883 [ scc.git] DEBUG Auto-merging package.json 2026-07-09 11:05:16,955 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:17,019 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-07-09 11:05:17,019 [ scc.git] DEBUG package.json | 2 +- 2026-07-09 11:05:17,019 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-07-09 11:05:17,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:17,232 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-09 11:05:17,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:17,284 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-07-09 11:05:17,484 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:17,544 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:05:17,544 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:05:17,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:17,733 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:17,837 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:17,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:17,849 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:17,951 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:18,008 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453adf59d0> has no local changes 2026-07-09 11:05:18,008 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:18,128 [ scc.git] DEBUG [detached HEAD 76f737f] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:18,130 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:18,130 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:18,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-07-09 11:05:18,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-07-09 11:05:18,989 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:19,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:20,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:20,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:05:21,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:21,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:21,727 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:05:21,727 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:21,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-09 11:05:21,728 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:21,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:21,744 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:21,759 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:21,759 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:21,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:21,821 [ scc.git] DEBUG Already up to date. 2026-07-09 11:05:21,821 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-07-09 11:05:22,251 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-07-09 11:05:22,251 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-07-09 11:05:22,269 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:22,270 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:22,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:22,282 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-09 11:05:22,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:22,331 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-07-09 11:05:22,463 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:22,511 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:05:22,511 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:05:22,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:22,746 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:22,840 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:22,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:22,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:22,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:22,987 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453b038810> has no local changes 2026-07-09 11:05:22,987 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:23,117 [ scc.git] DEBUG [detached HEAD 29d2e96] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:23,119 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:23,119 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:23,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-07-09 11:05:23,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-07-09 11:05:23,911 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:23,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-09 11:05:23,911 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:23,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:23,928 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:23,947 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:23,948 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:23,972 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:24,185 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-07-09 11:05:24,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-07-09 11:05:25,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-07-09 11:05:25,634 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:25,634 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:25,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:25,653 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:25,770 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:25,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:25,785 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:25,893 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:25,953 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae8f0d0> has no local changes 2026-07-09 11:05:25,953 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:26,087 [ scc.git] DEBUG [detached HEAD 7b038e9] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:26,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:26,089 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:26,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-07-09 11:05:26,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-07-09 11:05:26,994 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:27,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:28,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:28,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:05:29,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:29,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:29,919 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:05:30,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-07-09 11:05:30,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-07-09 11:05:31,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:32,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:32,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:33,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:33,206 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-09 11:05:33,206 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:33,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-09 11:05:33,207 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:33,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:33,224 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:33,241 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:33,241 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:33,259 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:33,317 [ scc.git] DEBUG Already up to date. 2026-07-09 11:05:33,317 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-09 11:05:33,901 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-09 11:05:33,901 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-09 11:05:33,925 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-09 11:05:34,316 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-07-09 11:05:34,316 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-09 11:05:34,339 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:34,339 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:34,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:34,355 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-09 11:05:34,389 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:34,403 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-09 11:05:34,630 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG Auto-merging setup.py 2026-07-09 11:05:34,630 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-07-09 11:05:34,653 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:05:34,654 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:05:34,687 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-09 11:05:34,839 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-07-09 11:05:35,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:35,023 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-07-09 11:05:35,050 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-07-09 11:05:35,074 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2026-07-09 11:05:35,085 [ scc.config] DEBUG Found github.token 2026-07-09 11:05:35,085 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-07-09 11:05:35,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-09 11:05:35,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:35,118 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-07-09 11:05:35,310 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:35,371 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:05:35,371 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:05:35,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:35,563 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:35,684 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:35,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:35,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:35,804 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:35,861 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae8a490> has no local changes 2026-07-09 11:05:35,861 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:35,979 [ scc.git] DEBUG [detached HEAD 639862b] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:35,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:35,981 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:36,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-07-09 11:05:36,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-07-09 11:05:37,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-07-09 11:05:37,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-07-09 11:05:38,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:39,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:39,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:39,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:39,969 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-09 11:05:39,969 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:39,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-09 11:05:39,970 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:39,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:39,989 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:40,008 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:40,008 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:40,029 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:40,183 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-07-09 11:05:40,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-07-09 11:05:41,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-07-09 11:05:42,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-07-09 11:05:42,426 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-07-09 11:05:42,933 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-07-09 11:05:42,933 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-07-09 11:05:42,957 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:42,957 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:42,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:42,972 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-07-09 11:05:43,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:43,022 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-07-09 11:05:43,223 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-07-09 11:05:43,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:43,372 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-07-09 11:05:43,372 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-07-09 11:05:43,372 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-07-09 11:05:43,372 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-07-09 11:05:43,372 [ scc.git] DEBUG ms/test | 2 ++ 2026-07-09 11:05:43,372 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-07-09 11:05:43,372 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-07-09 11:05:43,372 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-07-09 11:05:43,372 [ scc.git] DEBUG create mode 100755 ms/test 2026-07-09 11:05:43,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:43,585 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:43,707 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:43,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:43,722 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:43,833 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:43,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae286d0> has no local changes 2026-07-09 11:05:43,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:44,068 [ scc.git] DEBUG [detached HEAD e94b892] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:44,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:44,070 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:44,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-07-09 11:05:44,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-07-09 11:05:44,861 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:45,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:46,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:46,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:05:47,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:47,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:47,585 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:05:47,585 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:47,585 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-09 11:05:47,586 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:47,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:47,604 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:47,624 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:47,624 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:47,646 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:47,704 [ scc.git] DEBUG Already up to date. 2026-07-09 11:05:47,704 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-07-09 11:05:48,141 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-07-09 11:05:48,141 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-07-09 11:05:48,166 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:48,166 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:48,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:48,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-09 11:05:48,199 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:48,211 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-07-09 11:05:48,398 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:48,466 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:05:48,466 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:05:48,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:48,679 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:48,799 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:48,800 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:48,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:48,924 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:48,979 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453aecfdd0> has no local changes 2026-07-09 11:05:48,979 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:49,114 [ scc.git] DEBUG [detached HEAD c4b57e4] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:49,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:49,117 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:49,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-07-09 11:05:50,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-07-09 11:05:50,184 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:05:50,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:51,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:51,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:05:52,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:52,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:52,874 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:05:52,874 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:05:52,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-09 11:05:52,874 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:52,875 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:52,893 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:05:52,910 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:05:52,910 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:05:52,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:05:53,070 [ scc.git] DEBUG Updating deab817..160d894 2026-07-09 11:05:53,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-07-09 11:05:53,720 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-07-09 11:05:54,137 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-07-09 11:05:54,137 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-07-09 11:05:54,156 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:05:54,156 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:54,156 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:54,167 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-09 11:05:54,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:54,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-07-09 11:05:54,318 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:05:54,367 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:05:54,367 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:05:54,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:05:54,578 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:05:54,680 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:05:54,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:05:54,690 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:05:54,782 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:05:54,829 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453848ae90> has no local changes 2026-07-09 11:05:54,829 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:05:54,944 [ scc.git] DEBUG [detached HEAD 50d3d6d] merge master -Dorg -Ssuccess-only 2026-07-09 11:05:54,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:05:54,946 [ scc.git] INFO Overriding base-branch from master to main 2026-07-09 11:05:54,946 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:05:55,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-07-09 11:05:55,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-07-09 11:05:56,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-07-09 11:05:56,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:57,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:05:57,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:05:58,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-07-09 11:05:58,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:05:58,807 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-07-09 11:05:59,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-07-09 11:05:59,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-07-09 11:06:00,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-07-09 11:06:00,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:01,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:06:01,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:02,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:06:02,390 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-09 11:06:02,391 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:06:02,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-09 11:06:02,391 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:02,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:02,410 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-07-09 11:06:02,427 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:06:02,427 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-07-09 11:06:02,449 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-07-09 11:06:02,585 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-07-09 11:06:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-07-09 11:06:03,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-07-09 11:06:03,995 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-07-09 11:06:04,492 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-09 11:06:04,492 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-07-09 11:06:04,516 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-07-09 11:06:05,141 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-07-09 11:06:05,141 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-07-09 11:06:05,162 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:06:05,162 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:05,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:05,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-09 11:06:05,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:05,215 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-09 11:06:05,439 [ scc.git] DEBUG Auto-merging README.rst 2026-07-09 11:06:05,439 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-07-09 11:06:05,439 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-07-09 11:06:05,439 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-09 11:06:05,461 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-07-09 11:06:05,462 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-07-09 11:06:05,493 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-09 11:06:05,628 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-07-09 11:06:05,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:05,816 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-07-09 11:06:05,838 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-07-09 11:06:05,858 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#3](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-07-09 11:06:05,870 [ scc.config] DEBUG Found github.token 2026-07-09 11:06:05,870 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-07-09 11:06:05,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-09 11:06:05,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:05,923 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-07-09 11:06:06,114 [ scc.git] DEBUG Auto-merging README.rst 2026-07-09 11:06:06,114 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-07-09 11:06:06,192 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:06:06,264 [ scc.git] DEBUG README.rst | 3 + 2026-07-09 11:06:06,264 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-07-09 11:06:06,264 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-07-09 11:06:06,264 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-07-09 11:06:06,264 [ scc.git] DEBUG setup.py | 5 +- 2026-07-09 11:06:06,264 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-07-09 11:06:06,264 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-07-09 11:06:06,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:06,471 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:06:06,593 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:06,593 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:06,607 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:06,717 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:06,785 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453aeabf50> has no local changes 2026-07-09 11:06:06,785 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:06,933 [ scc.git] DEBUG [detached HEAD bd40b72] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:06,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:06,935 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:06:07,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-07-09 11:06:07,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-07-09 11:06:07,755 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:06:08,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:08,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:06:09,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:06:10,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:10,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:06:10,617 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:10,617 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:06:10,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-09 11:06:10,618 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:10,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:10,637 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:06:10,657 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:06:10,657 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:06:10,679 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:06:10,741 [ scc.git] DEBUG Already up to date. 2026-07-09 11:06:10,741 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-07-09 11:06:11,204 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-07-09 11:06:11,204 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-07-09 11:06:11,227 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:06:11,227 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:11,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:11,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-09 11:06:11,262 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:11,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-07-09 11:06:11,468 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:06:11,529 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:06:11,529 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:06:11,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:11,724 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:06:11,827 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:11,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:11,839 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:11,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:11,995 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f45384a4a50> has no local changes 2026-07-09 11:06:11,995 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:12,113 [ scc.git] DEBUG [detached HEAD b782bff] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:12,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:12,115 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:06:12,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-07-09 11:06:12,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-07-09 11:06:12,909 [ scc.repo] DEBUG # ... Include label: dependencies 2026-07-09 11:06:13,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:14,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-07-09 11:06:14,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-07-09 11:06:15,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-07-09 11:06:15,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-07-09 11:06:15,652 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:15,652 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:06:15,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-09 11:06:15,652 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:15,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:15,667 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:06:15,681 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:06:15,681 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:06:15,698 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:06:15,746 [ scc.git] DEBUG Already up to date. 2026-07-09 11:06:15,746 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-07-09 11:06:16,145 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-07-09 11:06:16,145 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-07-09 11:06:16,168 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:06:16,168 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:16,168 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:16,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-09 11:06:16,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:16,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-07-09 11:06:16,404 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-07-09 11:06:16,462 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-07-09 11:06:16,462 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-07-09 11:06:16,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:16,653 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:06:16,760 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:16,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:16,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:16,876 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:16,934 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453849a310> has no local changes 2026-07-09 11:06:16,934 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:17,090 [ scc.git] DEBUG [detached HEAD b6b7703] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:17,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:17,092 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:06:17,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-07-09 11:06:17,322 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:06:17,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-09 11:06:17,323 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:17,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:17,341 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-07-09 11:06:17,358 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:06:17,358 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-07-09 11:06:17,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-07-09 11:06:17,435 [ scc.git] DEBUG Already up to date. 2026-07-09 11:06:17,435 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:06:17,435 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:17,435 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:17,448 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:06:17,552 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:17,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:17,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:17,656 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:17,735 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f45384bf550> has no local changes 2026-07-09 11:06:17,736 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:17,869 [ scc.git] DEBUG [detached HEAD 9c5bb7f] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:17,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:17,871 [ scc.git] INFO Overriding base-branch from master to develop 2026-07-09 11:06:17,871 [ scc.repo] DEBUG ## PRs found: 2026-07-09 11:06:18,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-07-09 11:06:18,098 [ scc.repo] DEBUG ## Branches found: 2026-07-09 11:06:18,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-09 11:06:18,099 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:18,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:18,116 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-07-09 11:06:18,133 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-07-09 11:06:18,133 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-07-09 11:06:18,160 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-07-09 11:06:18,435 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-07-09 11:06:18,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-07-09 11:06:19,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-07-09 11:06:20,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-07-09 11:06:21,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-07-09 11:06:22,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-07-09 11:06:22,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-07-09 11:06:23,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-07-09 11:06:23,609 [ scc.git] DEBUG ## Unique users: [] 2026-07-09 11:06:23,609 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:23,609 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:23,627 [ scc.git] DEBUG Calling 'git submodule update' 2026-07-09 11:06:23,746 [ scc.git] DEBUG Get sha1 of %s 2026-07-09 11:06:23,746 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-07-09 11:06:23,759 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:23,869 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:23,970 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453ae1e9d0> has no local changes 2026-07-09 11:06:23,970 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:24,109 [ scc.git] DEBUG [detached HEAD 0b3fe19] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:24,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:24,111 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-07-09 11:06:24,310 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-07-09 11:06:24,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:24,529 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-07-09 11:06:24,535 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-07-09 11:06:24,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:24,977 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-07-09 11:06:24,983 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-07-09 11:06:25,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:25,429 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-07-09 11:06:25,436 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-07-09 11:06:25,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:25,868 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-07-09 11:06:26,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:26,304 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-07-09 11:06:26,312 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-07-09 11:06:26,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:26,756 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-07-09 11:06:26,763 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-07-09 11:06:27,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:27,373 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-07-09 11:06:27,381 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-07-09 11:06:27,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:27,813 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-07-09 11:06:27,820 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-07-09 11:06:28,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:28,277 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-07-09 11:06:28,284 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-07-09 11:06:28,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:28,707 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-07-09 11:06:28,714 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-07-09 11:06:29,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:29,155 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-07-09 11:06:29,162 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-07-09 11:06:29,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:29,607 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-07-09 11:06:29,614 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-07-09 11:06:30,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:30,053 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-07-09 11:06:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:30,514 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-07-09 11:06:30,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:30,965 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-07-09 11:06:30,972 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-07-09 11:06:31,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:31,451 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-07-09 11:06:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:31,900 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-07-09 11:06:32,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:32,349 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-07-09 11:06:32,356 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-07-09 11:06:32,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:32,791 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-07-09 11:06:32,797 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-07-09 11:06:33,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:33,237 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-07-09 11:06:33,245 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-07-09 11:06:33,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:33,705 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-07-09 11:06:33,711 [ scc.config] DEBUG Found submodule.scripts.url 2026-07-09 11:06:34,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-07-09 11:06:34,168 [ scc.config] DEBUG Found submodule.scripts.branch 2026-07-09 11:06:34,168 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-07-09 11:06:35,920 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f453b3c17d0> has local changes 2026-07-09 11:06:35,920 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..18887279 Previously merged: - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required) - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..cae0b026 Previously merged: - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 471 will-moore 'Z projection disabled tooltip' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' - PR 546 will-moore 'Use POST data for saveImgRdef params' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#3 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/3/)' 2026-07-09 11:06:36,357 [ scc.git] DEBUG [detached HEAD 78b2d7d] merge master -Dorg -Ssuccess-only 2026-07-09 11:06:36,357 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-07-09 11:06:36,358 [ scc.merge] INFO Repository: ome/omero-plugins 2026-07-09 11:06:36,358 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,358 [ scc.merge] INFO 2026-07-09 11:06:36,358 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,358 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-07-09 11:06:36,358 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-07-09 11:06:36,358 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-07-09 11:06:36,359 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-07-09 11:06:36,359 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-07-09 11:06:36,359 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-07-09 11:06:36,359 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-07-09 11:06:36,359 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-07-09 11:06:36,359 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-07-09 11:06:36,359 [ scc.merge] INFO 2026-07-09 11:06:36,359 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-07-09 11:06:36,359 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' (status: failure) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-07-09 11:06:36,359 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-07-09 11:06:36,359 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-07-09 11:06:36,359 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,360 [ scc.merge] INFO 2026-07-09 11:06:36,360 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-07-09 11:06:36,360 [ scc.merge] INFO 2026-07-09 11:06:36,360 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-07-09 11:06:36,360 [ scc.merge] INFO 2026-07-09 11:06:36,360 [ scc.merge] INFO Repository: ome/omero-figure 2026-07-09 11:06:36,360 [ scc.merge] INFO Updating 9cc36cde..18887279 2026-07-09 11:06:36,360 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-07-09 11:06:36,360 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 694 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.11' 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-07-09 11:06:36,361 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Repository: ome/omero-gallery 2026-07-09 11:06:36,361 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-07-09 11:06:36,361 [ scc.merge] INFO 2026-07-09 11:06:36,361 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-07-09 11:06:36,361 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' (status: action_required) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-07-09 11:06:36,361 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-07-09 11:06:36,361 [ scc.merge] INFO Updating 7a798cee..cae0b026 2026-07-09 11:06:36,362 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,362 [ scc.merge] INFO 2026-07-09 11:06:36,362 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 536 dependabot[bot] 'Bump shell-quote from 1.8.3 to 1.8.4' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 543 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.5' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 546 will-moore 'Use POST data for saveImgRdef params' 2026-07-09 11:06:36,362 [ scc.merge] INFO 2026-07-09 11:06:36,362 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 544 dependabot[bot] 'Bump js-yaml, mocha and eslint' 2026-07-09 11:06:36,362 [ scc.merge] INFO 2026-07-09 11:06:36,362 [ scc.merge] INFO Repository: ome/omero-mapr 2026-07-09 11:06:36,362 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-07-09 11:06:36,362 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,362 [ scc.merge] INFO 2026-07-09 11:06:36,362 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-07-09 11:06:36,362 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,362 [ scc.merge] INFO 2026-07-09 11:06:36,362 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Repository: ome/omero-metadata 2026-07-09 11:06:36,363 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-07-09 11:06:36,363 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Repository: ome/omero-parade 2026-07-09 11:06:36,363 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-07-09 11:06:36,363 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-07-09 11:06:36,363 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Repository: ome/omero-rois 2026-07-09 11:06:36,363 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-07-09 11:06:36,363 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-07-09 11:06:36,363 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Repository: ome/omero-signup 2026-07-09 11:06:36,363 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,363 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,363 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-07-09 11:06:36,363 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-07-09 11:06:36,364 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-07-09 11:06:36,364 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-07-09 11:06:36,364 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: ome/omero-upload 2026-07-09 11:06:36,364 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-07-09 11:06:36,364 [ scc.merge] INFO Updating deab817..160d894 2026-07-09 11:06:36,364 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-07-09 11:06:36,364 [ scc.merge] INFO Excluded PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-07-09 11:06:36,364 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-07-09 11:06:36,364 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Conflicting PRs (not included): 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-07-09 11:06:36,364 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-07-09 11:06:36,364 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,364 [ scc.merge] INFO Merged PRs: 2026-07-09 11:06:36,364 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,364 [ scc.merge] INFO 2026-07-09 11:06:36,365 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-07-09 11:06:36,365 [ scc.merge] INFO Already up to date. 2026-07-09 11:06:36,365 [ scc.merge] INFO 2026-07-09 11:06:36,365 [ scc.merge] INFO 2026-07-09 11:06:36,365 [ scc.merge] INFO Repository: ome/scripts 2026-07-09 11:06:36,365 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-07-09 11:06:36,365 [ scc.merge] INFO Previously merged: 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-07-09 11:06:36,365 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-07-09 11:06:36,365 [ scc.merge] INFO 2026-07-09 11:06:36,365 [ scc.merge] INFO 2026-07-09 11:06:36,365 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-07-09 11:06:36,365 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-07-09 11:06:36,376 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-07-09 11:06:36,389 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,402 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-07-09 11:06:36,402 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,413 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-07-09 11:06:36,414 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,426 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-07-09 11:06:36,426 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-07-09 11:06:36,441 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-07-09 11:06:36,455 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-07-09 11:06:36,468 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-07-09 11:06:36,482 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-07-09 11:06:36,497 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-07-09 11:06:36,512 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-07-09 11:06:36,526 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-07-09 11:06:36,541 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-07-09 11:06:36,556 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-07-09 11:06:36,568 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,580 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,581 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-07-09 11:06:36,581 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-07-09 11:06:36,593 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-07-09 11:06:36,605 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,617 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-07-09 11:06:36,618 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-07-09 11:06:36,630 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-07-09 11:06:36,644 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-07-09 11:06:36,659 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-07-09 11:06:36,659 [ scc.git] DEBUG Calling 'git remote' 2026-07-09 11:06:36,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 5811e18] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD e63b44f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-07-09 11:07:43,945 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-07-09 11:07:54,075 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-07-09 11:07:56,757 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-09 11:08:02,106 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-07-09 11:08:54,078 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS