![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 46 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 6e8d6c02735d91d63282abf7000916273d6c54c1 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Commit message: "Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147" > git rev-list --no-walk 6e8d6c02735d91d63282abf7000916273d6c54c1 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 40 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.5-cp39-abi3-manylinux_2_28_x86_64.whl (4.6 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.5 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-04-21 00:43:28,862 [ scc.config] DEBUG Found github.token 2024-04-21 00:43:28,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-21 00:43:29,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:43:29,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:43:29,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-21 00:43:29,905 [ scc.gh] DEBUG 3927 remaining from 5000 (Reset at 01:04 2024-04-21 00:43:29,906 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:29,911 [ scc.git] DEBUG Check current status 2024-04-21 00:43:29,911 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:29,915 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-21 00:43:29,915 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:29,964 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-21 00:43:29,967 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-21 00:43:29,970 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-21 00:43:29,972 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-21 00:43:30,006 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-21 00:43:30,008 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-21 00:43:30,011 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-21 00:43:30,105 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-21 00:43:30,109 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-21 00:43:30,126 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-21 00:43:30,129 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-21 00:43:30,132 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-21 00:43:30,135 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-21 00:43:30,137 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-21 00:43:30,148 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-21 00:43:30,151 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-21 00:43:30,154 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-21 00:43:30,156 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-21 00:43:30,159 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-21 00:43:30,161 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-21 00:43:30,164 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-21 00:43:30,167 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-21 00:43:30,171 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:30,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-21 00:43:30,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:31,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:31,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:32,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:32,200 [ scc.git] DEBUG Resetting... 2024-04-21 00:43:32,201 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-21 00:43:32,211 [ scc.git] DEBUG HEAD is now at 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-21 00:43:32,211 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-21 00:43:32,314 [ scc.git] DEBUG Check current status 2024-04-21 00:43:32,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:32,320 [ scc.git] DEBUG 6e8d6c0 Merge pull request #360 from ome/dependabot/submodules/omero-iviewer-9d8d147 2024-04-21 00:43:32,320 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:32,378 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-21 00:43:32,381 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-21 00:43:32,384 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-21 00:43:32,387 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-21 00:43:32,390 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-21 00:43:32,393 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-21 00:43:32,395 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-21 00:43:32,399 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-21 00:43:32,402 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-21 00:43:32,404 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-21 00:43:32,407 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-21 00:43:32,410 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-21 00:43:32,413 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-21 00:43:32,415 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-21 00:43:32,418 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-21 00:43:32,421 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-21 00:43:32,423 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-21 00:43:32,426 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-21 00:43:32,428 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-21 00:43:32,431 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-21 00:43:32,434 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-21 00:43:32,437 [ scc.git] DEBUG 2078ac72dbf11f2733e685000a274eff81c2ac2d scripts (v5.8.0-1-g2078ac7) 2024-04-21 00:43:32,438 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-21 00:43:32,438 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-21 00:43:32,439 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-21 00:43:32,439 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-21 00:43:32,439 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-21 00:43:32,439 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:43:32,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-21 00:43:33,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-04-21 00:43:33,209 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:43:33,210 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-21 00:43:33,210 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:43:33,210 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:43:33,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:43:33,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:43:33,222 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:43:33,222 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:43:33,228 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:43:33,234 [ scc.git] DEBUG Already up to date. 2024-04-21 00:43:33,235 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-04-21 00:43:33,649 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-21 00:43:33,649 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-04-21 00:43:33,655 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:43:33,655 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:43:33,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:43:33,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-21 00:43:33,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:43:33,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-21 00:43:33,728 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:43:33,731 [ scc.git] DEBUG scripts | 2 +- 2024-04-21 00:43:33,731 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-04-21 00:43:33,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:43:33,893 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:43:34,055 [ scc.git] DEBUG Submodule path 'scripts': checked out '5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-21 00:43:34,056 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:43:34,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:43:34,061 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:43:34,996 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f707058f460> has no local changes 2024-04-21 00:43:34,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:43:35,073 [ scc.git] DEBUG [detached HEAD 8f39cf7] merge master -Dorg -Snone 2024-04-21 00:43:35,074 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-21 00:43:35,074 [ scc.merge] INFO Already up to date. 2024-04-21 00:43:35,074 [ scc.merge] INFO 2024-04-21 00:43:35,074 [ scc.merge] INFO Merged PRs: 2024-04-21 00:43:35,074 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-21 00:43:35,074 [ scc.merge] INFO 2024-04-21 00:43:35,074 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-21 00:43:35,074 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' From https://github.com/ome/omero-figure ded0caab..87d179a0 master -> origin/master * [new tag] v6.2.1 -> v6.2.1 Submodule path 'omero-figure': checked out '87d179a0db8b6ef3cf9b81f3fe0c4879e263fb55' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-04-21 00:43:44,990 [ scc.config] DEBUG Found github.token 2024-04-21 00:43:44,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-04-21 00:43:45,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:43:45,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:43:46,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-04-21 00:43:46,058 [ scc.gh] DEBUG 3917 remaining from 5000 (Reset at 01:04 2024-04-21 00:43:46,059 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:46,063 [ scc.git] DEBUG Check current status 2024-04-21 00:43:46,064 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:46,068 [ scc.git] DEBUG 8f39cf7 merge master -Dorg -Snone 2024-04-21 00:43:46,068 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:46,121 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-21 00:43:46,124 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-21 00:43:46,127 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-21 00:43:46,131 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-21 00:43:46,135 [ scc.git] DEBUG +87d179a0db8b6ef3cf9b81f3fe0c4879e263fb55 omero-figure (v6.2.1-1-g87d179a0) 2024-04-21 00:43:46,139 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-21 00:43:46,142 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-21 00:43:46,146 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-21 00:43:46,149 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-21 00:43:46,152 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-21 00:43:46,155 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-21 00:43:46,159 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-21 00:43:46,162 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-21 00:43:46,166 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-21 00:43:46,169 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-21 00:43:46,172 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-21 00:43:46,175 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-21 00:43:46,178 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-21 00:43:46,181 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-21 00:43:46,184 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-21 00:43:46,186 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-21 00:43:46,190 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-04-21 00:43:46,195 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:46,196 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-04-21 00:43:46,198 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-04-21 00:43:46,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-04-21 00:43:47,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:47,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:47,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:48,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:48,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:48,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-21 00:43:48,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:48,384 [ scc.git] DEBUG Check current status 2024-04-21 00:43:48,384 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:48,388 [ scc.git] DEBUG c9c839c Merge pull request #64 from jburel/gateway_5_8_2 2024-04-21 00:43:48,388 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:48,431 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:48,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-04-21 00:43:49,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:49,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:50,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:50,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:50,528 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:50,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:43:50,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-21 00:43:50,570 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:50,575 [ scc.git] DEBUG Check current status 2024-04-21 00:43:50,576 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:50,580 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-04-21 00:43:50,580 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:50,625 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:50,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-04-21 00:43:51,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:51,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:52,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:52,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:52,683 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:52,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:43:52,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-21 00:43:52,721 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:52,725 [ scc.git] DEBUG Check current status 2024-04-21 00:43:52,725 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:52,729 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-04-21 00:43:52,729 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:52,767 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:53,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-04-21 00:43:53,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:54,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:54,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:54,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:54,967 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:55,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:43:55,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-21 00:43:55,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:55,019 [ scc.git] DEBUG Check current status 2024-04-21 00:43:55,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:55,023 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-21 00:43:55,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:55,064 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:55,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-04-21 00:43:55,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:56,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:56,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:57,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:57,228 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:57,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:43:57,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-21 00:43:57,291 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:57,297 [ scc.git] DEBUG Check current status 2024-04-21 00:43:57,298 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:57,321 [ scc.git] DEBUG 87d179a0 Bump version: 6.2.1 → 6.2.2.dev0 2024-04-21 00:43:57,322 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:57,373 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:57,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-04-21 00:43:58,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:43:58,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:43:58,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:43:59,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:43:59,419 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:43:59,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:43:59,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-21 00:43:59,461 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:43:59,466 [ scc.git] DEBUG Check current status 2024-04-21 00:43:59,466 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:43:59,471 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-21 00:43:59,471 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:43:59,514 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:43:59,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-04-21 00:44:00,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:00,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:01,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:01,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:01,604 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:01,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:01,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-21 00:44:01,649 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:01,653 [ scc.git] DEBUG Check current status 2024-04-21 00:44:01,653 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:01,658 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-04-21 00:44:01,658 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:01,706 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-04-21 00:44:02,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:02,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:03,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:03,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:03,799 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:03,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:03,844 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-21 00:44:03,845 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:03,849 [ scc.git] DEBUG Check current status 2024-04-21 00:44:03,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:03,853 [ scc.git] DEBUG 9d8d147 Merge pull request #468 from ome/dependabot/npm_and_yarn/express-4.19.2 2024-04-21 00:44:03,854 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:03,898 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:04,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-04-21 00:44:04,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:05,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:05,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:05,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:05,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:06,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:06,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-21 00:44:06,002 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:06,008 [ scc.git] DEBUG Check current status 2024-04-21 00:44:06,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:06,013 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-04-21 00:44:06,013 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:06,056 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:06,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-04-21 00:44:06,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:07,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:07,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:08,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:08,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:08,172 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:08,173 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-21 00:44:08,173 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:08,178 [ scc.git] DEBUG Check current status 2024-04-21 00:44:08,178 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:08,183 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-21 00:44:08,183 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:08,231 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:08,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-04-21 00:44:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:09,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:09,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:10,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:10,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:10,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:10,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-21 00:44:10,337 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:10,342 [ scc.git] DEBUG Check current status 2024-04-21 00:44:10,342 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:10,347 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-04-21 00:44:10,348 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:10,402 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:10,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-04-21 00:44:11,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:11,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:12,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:12,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:12,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:12,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:12,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-21 00:44:12,545 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:12,550 [ scc.git] DEBUG Check current status 2024-04-21 00:44:12,550 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:12,554 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-04-21 00:44:12,554 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:12,598 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:12,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-04-21 00:44:13,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:13,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:14,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:14,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:14,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:14,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:14,788 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-21 00:44:14,788 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:14,793 [ scc.git] DEBUG Check current status 2024-04-21 00:44:14,793 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:14,798 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-04-21 00:44:14,798 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:14,842 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:15,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-04-21 00:44:15,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:16,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:16,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:16,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:16,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:17,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:17,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-21 00:44:17,002 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:17,008 [ scc.git] DEBUG Check current status 2024-04-21 00:44:17,008 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:17,015 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-21 00:44:17,015 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:17,063 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:17,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-04-21 00:44:17,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:18,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:18,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:19,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:19,133 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:19,175 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:19,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-21 00:44:19,176 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:19,181 [ scc.git] DEBUG Check current status 2024-04-21 00:44:19,181 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:19,186 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-04-21 00:44:19,186 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:19,232 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:19,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-21 00:44:19,612 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-21 00:44:19,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-04-21 00:44:20,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:20,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:21,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:21,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:21,602 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:21,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:21,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-21 00:44:21,645 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:21,651 [ scc.git] DEBUG Check current status 2024-04-21 00:44:21,651 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:21,656 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-04-21 00:44:21,656 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:21,699 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:22,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-04-21 00:44:22,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:22,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:23,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:23,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:23,780 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:23,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:23,821 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-21 00:44:23,821 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:23,827 [ scc.git] DEBUG Check current status 2024-04-21 00:44:23,827 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:23,832 [ scc.git] DEBUG deab817 update setup-python to v4 2024-04-21 00:44:23,832 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:23,877 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:24,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-04-21 00:44:24,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:25,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:25,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:25,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:25,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:26,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:26,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-21 00:44:26,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:26,018 [ scc.git] DEBUG Check current status 2024-04-21 00:44:26,018 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:26,023 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-21 00:44:26,023 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:26,068 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:26,069 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-04-21 00:44:26,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-04-21 00:44:26,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:27,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:27,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:28,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:28,122 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:28,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:28,165 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-21 00:44:28,165 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:28,171 [ scc.git] DEBUG Check current status 2024-04-21 00:44:28,171 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:28,176 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-04-21 00:44:28,176 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:28,218 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:28,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-21 00:44:28,539 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-21 00:44:28,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-04-21 00:44:29,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:29,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:30,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:30,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:30,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:30,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-21 00:44:30,523 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:30,530 [ scc.git] DEBUG Check current status 2024-04-21 00:44:30,530 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:30,536 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-04-21 00:44:30,536 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:30,584 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:30,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-21 00:44:30,910 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-21 00:44:31,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-04-21 00:44:31,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:32,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:32,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:32,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:32,844 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:32,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:32,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-21 00:44:32,886 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:32,892 [ scc.git] DEBUG Check current status 2024-04-21 00:44:32,893 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:32,898 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-21 00:44:32,898 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:32,944 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:33,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-04-21 00:44:33,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:34,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:34,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:34,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:34,996 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:35,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:35,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-21 00:44:35,041 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-04-21 00:44:35,047 [ scc.git] DEBUG Check current status 2024-04-21 00:44:35,047 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:35,064 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-21 00:44:35,065 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:35,116 [ scc.config] DEBUG Found remote.origin.url 2024-04-21 00:44:35,118 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-04-21 00:44:35,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-21 00:44:35,430 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-21 00:44:35,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-04-21 00:44:36,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-04-21 00:44:36,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-04-21 00:44:36,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-04-21 00:44:37,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-04-21 00:44:37,365 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:37,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:37,409 [ scc.git] DEBUG Resetting... 2024-04-21 00:44:37,409 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-04-21 00:44:37,421 [ scc.git] DEBUG HEAD is now at 8f39cf7 merge master -Dorg -Snone 2024-04-21 00:44:37,421 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-04-21 00:44:37,484 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'ded0caabac1291c156991d6dd2a997a7d02890a7' 2024-04-21 00:44:37,538 [ scc.git] DEBUG Check current status 2024-04-21 00:44:37,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-04-21 00:44:37,544 [ scc.git] DEBUG 8f39cf7 merge master -Dorg -Snone 2024-04-21 00:44:37,544 [ scc.git] DEBUG Calling 'git submodule status' 2024-04-21 00:44:37,591 [ scc.git] DEBUG c9c839c17061e63d9d7dd0fe77de72ba101b95d8 minimal-omero-client (heads/master) 2024-04-21 00:44:37,593 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-04-21 00:44:37,596 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-04-21 00:44:37,599 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-04-21 00:44:37,602 [ scc.git] DEBUG ded0caabac1291c156991d6dd2a997a7d02890a7 omero-figure (v6.2.0-8-gded0caab) 2024-04-21 00:44:37,605 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-04-21 00:44:37,607 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-04-21 00:44:37,611 [ scc.git] DEBUG 9d8d14738ebdd289bee26ff946e29f8f63c53596 omero-iviewer (v0.13.0-20-g9d8d147) 2024-04-21 00:44:37,614 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-04-21 00:44:37,617 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-04-21 00:44:37,619 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-04-21 00:44:37,622 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-04-21 00:44:37,626 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-04-21 00:44:37,629 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-04-21 00:44:37,632 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-04-21 00:44:37,635 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-04-21 00:44:37,638 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-04-21 00:44:37,641 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-04-21 00:44:37,644 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-04-21 00:44:37,647 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-04-21 00:44:37,650 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-04-21 00:44:37,653 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-04-21 00:44:37,655 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-04-21 00:44:37,655 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-04-21 00:44:37,655 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-04-21 00:44:37,655 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-04-21 00:44:37,655 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-04-21 00:44:37,655 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-04-21 00:44:37,655 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:44:37,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-04-21 00:44:38,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/362 HTTP/1.1" 200 None 2024-04-21 00:44:38,341 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:44:38,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-04-21 00:44:39,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:44:39,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5 HTTP/1.1" 200 None 2024-04-21 00:44:40,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/524550bfd9133bd44c5f72ed00e9561bfbe2ebe5?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:44:40,274 [ scc.repo] DEBUG - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-21 00:44:40,275 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:44:40,275 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:40,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:40,282 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:44:40,289 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:44:40,290 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:44:40,297 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:44:40,304 [ scc.git] DEBUG Already up to date. 2024-04-21 00:44:40,305 [ scc.git] DEBUG Calling 'git fetch origin pull/362/head' 2024-04-21 00:44:40,699 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-04-21 00:44:40,699 [ scc.git] DEBUG * branch refs/pull/362/head -> FETCH_HEAD 2024-04-21 00:44:40,705 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:44:40,705 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:40,705 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:40,712 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-21 00:44:40,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:40,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 362 (Bump scripts from `2078ac7` to `5a90893`) 524550bfd9133bd44c5f72ed00e9561bfbe2ebe5' 2024-04-21 00:44:40,732 [ scc.git] DEBUG Already up to date. 2024-04-21 00:44:40,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:44:40,893 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:44:40,958 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:40,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:40,965 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:44:41,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-04-21 00:44:41,307 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:44:41,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-21 00:44:41,307 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:41,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:41,313 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:44:41,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:44:41,329 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:44:41,336 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:44:41,342 [ scc.git] DEBUG Already up to date. 2024-04-21 00:44:41,342 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:44:41,342 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:41,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:41,347 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:44:41,387 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:41,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:41,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:41,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:44:41,441 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9452d9ffd0> has no local changes 2024-04-21 00:44:41,442 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:44:41,451 [ scc.git] DEBUG [detached HEAD dd2f875] merge master -Dorg -Ssuccess-only 2024-04-21 00:44:41,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:41,452 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:44:41,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-04-21 00:44:42,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-04-21 00:44:42,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-04-21 00:44:43,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-21 00:44:43,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:44:44,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:44:44,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-04-21 00:44:45,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:44:45,083 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-04-21 00:44:45,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-04-21 00:44:46,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-04-21 00:44:46,022 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:44:46,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-21 00:44:46,023 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:46,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:46,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:44:46,035 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:44:46,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:44:46,041 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:44:46,047 [ scc.git] DEBUG Already up to date. 2024-04-21 00:44:46,047 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-04-21 00:44:46,475 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-04-21 00:44:46,475 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-04-21 00:44:46,481 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:44:46,481 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:46,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:46,487 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-21 00:44:46,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:46,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-04-21 00:44:46,525 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:44:46,528 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-04-21 00:44:46,528 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-04-21 00:44:46,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:44:46,691 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:44:46,736 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:46,736 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:46,742 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:46,784 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:44:46,791 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9452dcb0d0> has no local changes 2024-04-21 00:44:46,792 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:44:46,801 [ scc.git] DEBUG [detached HEAD 20a5a8a] merge master -Dorg -Ssuccess-only 2024-04-21 00:44:46,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:46,802 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:44:47,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-04-21 00:44:47,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-04-21 00:44:48,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-04-21 00:44:48,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-04-21 00:44:49,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-04-21 00:44:49,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-21 00:44:50,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:44:50,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-04-21 00:44:50,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:44:50,952 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-04-21 00:44:51,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-04-21 00:44:51,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-04-21 00:44:52,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-04-21 00:44:52,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-04-21 00:44:53,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-04-21 00:44:53,269 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:44:53,269 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-21 00:44:53,269 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:53,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:53,275 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:44:53,280 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:44:53,281 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:44:53,286 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:44:53,293 [ scc.git] DEBUG Already up to date. 2024-04-21 00:44:53,293 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-04-21 00:44:53,780 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-04-21 00:44:53,781 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-04-21 00:44:53,787 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:44:53,787 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:53,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:53,795 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-21 00:44:53,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:53,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-04-21 00:44:53,832 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:44:53,836 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-04-21 00:44:53,836 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-04-21 00:44:53,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:44:53,990 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:44:54,032 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:44:54,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:44:54,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:44:54,078 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:44:54,091 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451cf5f40> has no local changes 2024-04-21 00:44:54,091 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:44:54,101 [ scc.git] DEBUG [detached HEAD 3159e9c] merge master -Dorg -Ssuccess-only 2024-04-21 00:44:54,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:44:54,102 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:44:54,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-04-21 00:44:54,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-04-21 00:44:55,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-04-21 00:44:55,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-04-21 00:44:56,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-21 00:44:56,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:44:57,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:44:57,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-21 00:44:58,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-04-21 00:44:58,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-04-21 00:44:59,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-04-21 00:44:59,148 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-04-21 00:44:59,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-04-21 00:45:00,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-04-21 00:45:00,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-04-21 00:45:01,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-21 00:45:01,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:02,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-04-21 00:45:02,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:02,487 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-21 00:45:02,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-04-21 00:45:03,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-04-21 00:45:03,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-04-21 00:45:04,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-21 00:45:04,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:05,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-04-21 00:45:05,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:05,842 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-04-21 00:45:05,843 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:05,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-21 00:45:05,844 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:05,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:05,851 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:05,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:05,857 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:05,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:05,868 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:05,869 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-04-21 00:45:06,309 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-21 00:45:06,309 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-04-21 00:45:06,316 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-04-21 00:45:06,736 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-21 00:45:06,736 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-04-21 00:45:06,741 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-04-21 00:45:07,166 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-04-21 00:45:07,166 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-04-21 00:45:07,172 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:07,172 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:07,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:07,178 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-21 00:45:07,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:07,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-21 00:45:07,262 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-21 00:45:07,262 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-21 00:45:07,262 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-21 00:45:07,262 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:45:07,262 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:45:07,268 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-21 00:45:07,275 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-21 00:45:07,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:07,429 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-04-21 00:45:07,440 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-21 00:45:07,446 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-04-21 00:45:07,452 [ scc.config] DEBUG Found github.token 2024-04-21 00:45:07,452 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-04-21 00:45:07,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-21 00:45:07,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:07,464 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-21 00:45:07,513 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-04-21 00:45:07,513 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-04-21 00:45:07,513 [ scc.git] DEBUG Auto-merging setup.py 2024-04-21 00:45:07,513 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-04-21 00:45:07,513 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-21 00:45:07,513 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-04-21 00:45:07,513 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-04-21 00:45:07,513 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:45:07,513 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:45:07,520 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-21 00:45:07,528 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-04-21 00:45:07,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:07,868 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-04-21 00:45:07,877 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-04-21 00:45:07,885 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-04-21 00:45:07,891 [ scc.config] DEBUG Found github.token 2024-04-21 00:45:07,891 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-04-21 00:45:07,891 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-21 00:45:07,901 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:07,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-04-21 00:45:07,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-04-21 00:45:07,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-04-21 00:45:07,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:07,954 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-04-21 00:45:07,954 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-04-21 00:45:07,954 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-04-21 00:45:07,954 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-04-21 00:45:07,954 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-04-21 00:45:07,954 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-04-21 00:45:08,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:08,279 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:08,320 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:08,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:08,326 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:08,368 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:08,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451cac640> has no local changes 2024-04-21 00:45:08,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:08,384 [ scc.git] DEBUG [detached HEAD 8c1722a] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:08,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:08,385 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:08,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-04-21 00:45:09,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/553 HTTP/1.1" 200 None 2024-04-21 00:45:09,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09f4867b631d72d6a362989df0e7194f40aa36c1 HTTP/1.1" 200 None 2024-04-21 00:45:10,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09f4867b631d72d6a362989df0e7194f40aa36c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:10,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09f4867b631d72d6a362989df0e7194f40aa36c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:11,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/09f4867b631d72d6a362989df0e7194f40aa36c1 HTTP/1.1" 200 None 2024-04-21 00:45:11,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/09f4867b631d72d6a362989df0e7194f40aa36c1?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:11,611 [ scc.repo] DEBUG - PR 553 sbesson 'Figure_To_Pdf: use max plane size to select the appropriate zoom level' 2024-04-21 00:45:12,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-04-21 00:45:12,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-04-21 00:45:12,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-04-21 00:45:13,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477 HTTP/1.1" 200 None 2024-04-21 00:45:14,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/477/comments HTTP/1.1" 200 None 2024-04-21 00:45:14,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-21 00:45:15,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:15,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:16,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/8e01878cc2be8a9762cc842f970adbdfabdfdb29 HTTP/1.1" 200 None 2024-04-21 00:45:16,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/8e01878cc2be8a9762cc842f970adbdfabdfdb29?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:16,446 [ scc.repo] DEBUG - PR 477 will-moore 'Vite' 2024-04-21 00:45:16,446 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:16,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-21 00:45:16,447 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:16,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:16,454 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:16,460 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:16,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:16,468 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:16,483 [ scc.git] DEBUG Updating ded0caab..87d179a0 2024-04-21 00:45:16,483 [ scc.git] DEBUG Calling 'git fetch origin pull/477/head' 2024-04-21 00:45:16,906 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-21 00:45:16,906 [ scc.git] DEBUG * branch refs/pull/477/head -> FETCH_HEAD 2024-04-21 00:45:16,912 [ scc.git] DEBUG Calling 'git fetch origin pull/553/head' 2024-04-21 00:45:17,509 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-04-21 00:45:17,509 [ scc.git] DEBUG * branch refs/pull/553/head -> FETCH_HEAD 2024-04-21 00:45:17,512 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:17,512 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:17,512 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:17,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-21 00:45:17,636 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:17,643 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 477 (Vite) 8e01878cc2be8a9762cc842f970adbdfabdfdb29' 2024-04-21 00:45:17,715 [ scc.git] DEBUG Auto-merging .bumpversion.cfg 2024-04-21 00:45:17,715 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-04-21 00:45:17,715 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:17,764 [ scc.git] DEBUG .bumpversion.cfg | 1 + 2024-04-21 00:45:17,764 [ scc.git] DEBUG .gitignore | 5 +- 2024-04-21 00:45:17,764 [ scc.git] DEBUG Dockerfile | 15 - 2024-04-21 00:45:17,764 [ scc.git] DEBUG Gruntfile.js | 177 - 2024-04-21 00:45:17,764 [ scc.git] DEBUG README.rst | 58 +- 2024-04-21 00:45:17,764 [ scc.git] DEBUG deploy_build.sh | 12 + 2024-04-21 00:45:17,764 [ scc.git] DEBUG docs/demo/index.html | 940 --- 2024-04-21 00:45:17,764 [ scc.git] DEBUG .../static/figure/3rdparty/backbone-1.0.0.js | 1571 ---- 2024-04-21 00:45:17,764 [ scc.git] DEBUG .../figure/3rdparty/backbone.mousetrap/README.md | 28 - 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.css | 6805 ---------------- 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/css/bootstrap.min.css | 9 - 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.eot | Bin 14079 -> 0 bytes 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.svg | 228 - 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.ttf | Bin 29512 -> 0 bytes 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../fonts/glyphicons-halflings-regular.woff | Bin 16448 -> 0 bytes 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.js | 1999 ----- 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../3rdparty/bootstrap-3.0.0/js/bootstrap.min.js | 6 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.../jquery-ui-1.10.4/css/jquery.ui.slider.css | 73 - 2024-04-21 00:45:17,765 [ scc.git] DEBUG .../3rdparty/jquery-ui-1.10.4/jquery-ui.min.js | 12 - 2024-04-21 00:45:17,767 [ scc.git] DEBUG omero_figure/static/figure/3rdparty/json2.js | 481 -- 2024-04-21 00:45:17,767 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.js | 1740 ----- 2024-04-21 00:45:17,767 [ scc.git] DEBUG .../markdown-browser-0.6.0-beta1/markdown.min.js | 1 - 2024-04-21 00:45:17,767 [ scc.git] DEBUG .../3rdparty/mousetrap-1.5.3/mousetrap.min.js | 11 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael-min.js | 11 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/raphael.js | 8117 -------------------- 2024-04-21 00:45:17,768 [ scc.git] DEBUG .../figure/3rdparty/raphael-2.1.2/scaleraphael.js | 102 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG .../figure/3rdparty/underscore-1.13.1-umd-min.js | 6 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG omero_figure/templates/figure/index.html | 1175 --- 2024-04-21 00:45:17,768 [ scc.git] DEBUG omero_figure/views.py | 59 +- 2024-04-21 00:45:17,768 [ scc.git] DEBUG package-lock.json | 6531 +--------------- 2024-04-21 00:45:17,768 [ scc.git] DEBUG package.json | 27 +- 2024-04-21 00:45:17,768 [ scc.git] DEBUG setup.py | 9 +- 2024-04-21 00:45:17,768 [ scc.git] DEBUG spec/ViewportViewSpec.js | 99 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG spec/images/testImage.png | Bin 24088 -> 0 bytes 2024-04-21 00:45:17,768 [ scc.git] DEBUG spec/javascripts/PanelSpec.js | 177 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG spec/javascripts/ViewportViewSpec.js | 69 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG spec/javascripts/fixtures/previewTab.html | 19 - 2024-04-21 00:45:17,768 [ scc.git] DEBUG src/.env | 2 + 2024-04-21 00:45:17,768 [ scc.git] DEBUG {omero_figure/static/figure => src}/css/figure.css | 438 +- 2024-04-21 00:45:17,768 [ scc.git] DEBUG .../static/figure => src}/images/arrow-icon-16.png | Bin 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src/js/views/scalebar_form_view.js | 24 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/js/views/svg_model_view.js | 11 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG .../ome.csrf.js => src/js/views/util.csrf.js | 29 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/js/views/util.js | 68 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/js/views/zt_sliders_view.js | 332 + 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/scss/styles.scss | 2 + 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/shapeEditorTest.html | 149 + 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/templates/channel_slider.template.html | 91 + 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/templates/channel_slider_template.html | 78 - 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...el_template.html => figure_panel.template.html} | 2 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...le_item.html => figure_file_item.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...te.html => image_display_options.template.html} | 11 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...anel_template.html => info_panel.template.html} | 8 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG .../{label_template.html => label.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...ate.html => label_right_vertical.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...ble_template.html => label_table.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ..._template.html => label_vertical.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...orm_template.html => labels_form.template.html} | 2 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 172 + 2024-04-21 00:45:17,770 [ scc.git] DEBUG src/templates/labels_form_inner_template.html | 173 - 2024-04-21 00:45:17,770 [ scc.git] DEBUG .../{lut_picker.html => lut_picker.template.html} | 6 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...modal_roi.html => crop_modal_roi.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...mplate.html => paper_setup_modal.template.html} | 103 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...mplate.html => preview_id_change.template.html} | 54 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ..._modal_roi.html => roi_modal_roi.template.html} | 4 +- 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...al_shape.html => roi_modal_shape.template.html} | 0 2024-04-21 00:45:17,770 [ scc.git] DEBUG ...t_buttons.html => roi_zt_buttons.template.html} | 4 +- 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/rois_form.template.html | 94 + 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/rois_form_template.html | 93 - 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/scalebar_form.template.html | 143 + 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/scalebar_form_template.html | 143 - 2024-04-21 00:45:17,771 [ scc.git] DEBUG ..._template.html => scalebar_panel.template.html} | 0 2024-04-21 00:45:17,771 [ scc.git] DEBUG ...r_template.html => shape_toolbar.template.html} | 62 +- 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/viewport.template.html | 5 + 2024-04-21 00:45:17,771 [ scc.git] DEBUG ..._template.html => viewport_inner.template.html} | 0 2024-04-21 00:45:17,771 [ scc.git] DEBUG src/templates/viewport_template.html | 9 - 2024-04-21 00:45:17,771 [ scc.git] DEBUG ...anel_template.html => xywh_panel.template.html} | 30 +- 2024-04-21 00:45:17,771 [ scc.git] DEBUG ..._crop_template.html => zoom_crop.template.html} | 10 +- 2024-04-21 00:45:17,771 [ scc.git] DEBUG vite.config.js | 21 + 2024-04-21 00:45:17,771 [ scc.git] DEBUG 136 files changed, 7924 insertions(+), 32992 deletions(-) 2024-04-21 00:45:17,771 [ scc.git] DEBUG delete mode 100644 Dockerfile 2024-04-21 00:45:17,771 [ scc.git] DEBUG delete mode 100644 Gruntfile.js 2024-04-21 00:45:17,771 [ scc.git] DEBUG create mode 100755 deploy_build.sh 2024-04-21 00:45:17,771 [ scc.git] DEBUG delete mode 100644 docs/demo/index.html 2024-04-21 00:45:17,771 [ scc.git] DEBUG delete mode 100644 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scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue.png 2024-04-21 00:45:17,771 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/saturation.png 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/bootstrap-colorpicker/js/bootstrap-colorpicker.min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-1.11.1/jquery.min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.base.css 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/css/jquery.ui.slider.css 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/jquery-ui-1.10.4/jquery-ui.min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/json2.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/markdown-browser-0.6.0-beta1/markdown.min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100755 omero_figure/static/figure/3rdparty/mousetrap-1.5.3/mousetrap.min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael-min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/raphael.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/raphael-2.1.2/scaleraphael.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/static/figure/3rdparty/underscore-1.13.1-umd-min.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 omero_figure/templates/figure/index.html 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 spec/ViewportViewSpec.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 spec/images/testImage.png 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 spec/javascripts/PanelSpec.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 spec/javascripts/ViewportViewSpec.js 2024-04-21 00:45:17,772 [ scc.git] DEBUG delete mode 100644 spec/javascripts/fixtures/previewTab.html 2024-04-21 00:45:17,772 [ scc.git] DEBUG create mode 100644 src/.env 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/css/figure.css (70%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/arrow-icon-16.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down-grey.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-down.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-flat.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/button-up.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/crop20.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/cursor-icon-16.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/ellipse-icon-16.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/gradient.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/bootstrap-colorpicker/img/bootstrap-colorpicker/hue-horizontal.png => src/images/hue.png (100%) 2024-04-21 00:45:17,772 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/line-icon-16.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/luts_10.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_dark32x20.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/markdown_light32x20.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polygon-icon-16.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/polyline-icon-16.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/projection20.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure => src}/images/square-outline-icon-16.png (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/index.html 2024-04-21 00:45:17,773 [ scc.git] DEBUG delete mode 100644 src/js/app.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/main.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shapeEditorTest.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/ellipse.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/line.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/polygon.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/rect.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/shape_editor/shape_manager.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename {omero_figure/static/figure/3rdparty/backbone.mousetrap => src/js/views}/backbone.mousetrap.js (76%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG mode change 100755 => 100644 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename omero_figure/static/figure/3rdparty/ome.csrf.js => src/js/views/util.csrf.js (84%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/js/views/zt_sliders_view.js 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/scss/styles.scss 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/shapeEditorTest.html 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/templates/channel_slider.template.html 2024-04-21 00:45:17,773 [ scc.git] DEBUG delete mode 100644 src/templates/channel_slider_template.html 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/{figure_panel_template.html => figure_panel.template.html} (77%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/files/{figure_file_item.html => figure_file_item.template.html} (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/{image_display_options_template.html => image_display_options.template.html} (54%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/{info_panel_template.html => info_panel.template.html} (90%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/labels/{label_template.html => label.template.html} (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/labels/{label_right_vertical_template.html => label_right_vertical.template.html} (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/labels/{label_table_template.html => label_table.template.html} (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/labels/{label_vertical_template.html => label_vertical.template.html} (100%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG rename src/templates/{labels_form_template.html => labels_form.template.html} (89%) 2024-04-21 00:45:17,773 [ scc.git] DEBUG create mode 100644 src/templates/labels_form_inner.template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG delete mode 100644 src/templates/labels_form_inner_template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/{lut_picker.html => lut_picker.template.html} (64%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{crop_modal_roi.html => crop_modal_roi.template.html} (100%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{paper_setup_modal_template.html => paper_setup_modal.template.html} (54%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{preview_Id_change_template.html => preview_id_change.template.html} (52%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_roi.html => roi_modal_roi.template.html} (94%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_modal_shape.html => roi_modal_shape.template.html} (100%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/modal_dialogs/{roi_zt_buttons.html => roi_zt_buttons.template.html} (62%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG create mode 100644 src/templates/rois_form.template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG delete mode 100644 src/templates/rois_form_template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG create mode 100644 src/templates/scalebar_form.template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG delete mode 100644 src/templates/scalebar_form_template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/{scalebar_panel_template.html => scalebar_panel.template.html} (100%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/shapes/{shape_toolbar_template.html => shape_toolbar.template.html} (60%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG create mode 100644 src/templates/viewport.template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/{viewport_inner_template.html => viewport_inner.template.html} (100%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG delete mode 100644 src/templates/viewport_template.html 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/{xywh_panel_template.html => xywh_panel.template.html} (64%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG rename src/templates/{zoom_crop_template.html => zoom_crop.template.html} (54%) 2024-04-21 00:45:17,774 [ scc.git] DEBUG create mode 100644 vite.config.js 2024-04-21 00:45:17,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:17,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09f4867b631d72d6a362989df0e7194f40aa36c1' 2024-04-21 00:45:17,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:17,948 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 553 (Figure_To_Pdf: use max plane size to select the appropriate zoom level) 09f4867b631d72d6a362989df0e7194f40aa36c1' 2024-04-21 00:45:17,973 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:17,977 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 ++++---- 2024-04-21 00:45:17,977 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 4 deletions(-) 2024-04-21 00:45:18,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:18,329 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:18,371 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:18,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:18,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:18,422 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:18,436 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451d07be0> has no local changes 2024-04-21 00:45:18,436 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Updating ded0caab..87d179a0 Previously merged: Merged PRs: - PR 477 will-moore 'Vite' - PR 553 sbesson 'Figure_To_Pdf: use max plane size to select the appropriate zoom level' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:18,447 [ scc.git] DEBUG [detached HEAD f77ef1b7] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:18,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:18,447 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:18,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-04-21 00:45:19,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-04-21 00:45:19,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-04-21 00:45:20,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-21 00:45:20,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:21,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-04-21 00:45:21,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:21,582 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-04-21 00:45:21,582 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:21,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-21 00:45:21,583 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:21,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:21,589 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:21,594 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:21,595 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:21,600 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:21,605 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:21,605 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-04-21 00:45:22,007 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-04-21 00:45:22,007 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-04-21 00:45:22,012 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:22,013 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:22,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:22,018 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-21 00:45:22,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:22,030 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-04-21 00:45:22,066 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-04-21 00:45:22,067 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:22,069 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-04-21 00:45:22,070 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-04-21 00:45:22,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:22,220 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:22,263 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:22,263 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:22,269 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:22,310 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:22,317 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451cbe550> has no local changes 2024-04-21 00:45:22,317 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:22,327 [ scc.git] DEBUG [detached HEAD f975850] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:22,328 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:22,328 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:22,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-04-21 00:45:23,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-04-21 00:45:23,137 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:45:23,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-21 00:45:24,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:24,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:25,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-04-21 00:45:25,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:25,648 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-21 00:45:25,648 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:25,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-21 00:45:25,649 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:25,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:25,655 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:25,661 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:25,661 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:25,667 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:25,673 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:25,674 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-04-21 00:45:26,055 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-04-21 00:45:26,055 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-04-21 00:45:26,060 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:26,060 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:26,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:26,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-21 00:45:26,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:26,079 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-04-21 00:45:26,091 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:26,096 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-04-21 00:45:26,096 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-04-21 00:45:26,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:26,251 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:26,294 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:26,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:26,300 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:26,350 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:26,357 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451cc6820> has no local changes 2024-04-21 00:45:26,358 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:26,368 [ scc.git] DEBUG [detached HEAD d3db3e6] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:26,368 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:26,368 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:26,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-04-21 00:45:27,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-04-21 00:45:27,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-04-21 00:45:28,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-04-21 00:45:28,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:29,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:29,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-04-21 00:45:30,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:30,022 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-04-21 00:45:30,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470 HTTP/1.1" 200 None 2024-04-21 00:45:30,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/470/comments HTTP/1.1" 200 None 2024-04-21 00:45:31,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-21 00:45:31,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:32,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:32,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/44025ed69514a02ecbc5d4655d3da7519ebf9170 HTTP/1.1" 200 None 2024-04-21 00:45:33,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/44025ed69514a02ecbc5d4655d3da7519ebf9170?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:33,253 [ scc.repo] DEBUG - PR 470 will-moore 'Movie playing waits for planes' 2024-04-21 00:45:33,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-04-21 00:45:34,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-21 00:45:34,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:35,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:35,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ca8b5aabef9a5358f93add750f4cbb51c864b7fe HTTP/1.1" 200 None 2024-04-21 00:45:36,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ca8b5aabef9a5358f93add750f4cbb51c864b7fe?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:36,024 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-04-21 00:45:36,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-04-21 00:45:36,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-04-21 00:45:37,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-21 00:45:37,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:38,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:38,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/409c3429dd72d05fef895dcca6d133f8340eabf4 HTTP/1.1" 200 None 2024-04-21 00:45:39,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/409c3429dd72d05fef895dcca6d133f8340eabf4?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:39,235 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-04-21 00:45:39,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-04-21 00:45:40,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-04-21 00:45:40,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-21 00:45:41,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:41,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-04-21 00:45:41,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:41,912 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-04-21 00:45:41,912 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:41,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-21 00:45:41,913 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:41,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:41,918 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:41,924 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:41,924 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:41,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:41,937 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:41,937 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-04-21 00:45:42,384 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-21 00:45:42,384 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-04-21 00:45:42,389 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-04-21 00:45:43,371 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-21 00:45:43,371 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-04-21 00:45:43,376 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-04-21 00:45:43,815 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-21 00:45:43,815 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-04-21 00:45:43,822 [ scc.git] DEBUG Calling 'git fetch origin pull/470/head' 2024-04-21 00:45:44,499 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-21 00:45:44,499 [ scc.git] DEBUG * branch refs/pull/470/head -> FETCH_HEAD 2024-04-21 00:45:44,504 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-04-21 00:45:44,918 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-04-21 00:45:44,918 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-04-21 00:45:44,923 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:44,923 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:44,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:44,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-21 00:45:44,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:44,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-04-21 00:45:44,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:44,959 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-04-21 00:45:44,959 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-04-21 00:45:44,959 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-04-21 00:45:45,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:45,114 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-21 00:45:45,122 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:45,128 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 409c3429dd72d05fef895dcca6d133f8340eabf4' 2024-04-21 00:45:45,221 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:45,227 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/app/header.html | 5 + 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/app/header.js | 46 ++++++++- 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/utils/figure.js | 220 ++++++++++++++++++++++++++++++++++++++++++ 2024-04-21 00:45:45,227 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 1 - 2024-04-21 00:45:45,227 [ scc.git] DEBUG 7 files changed, 294 insertions(+), 7 deletions(-) 2024-04-21 00:45:45,227 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-04-21 00:45:45,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:45,521 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-21 00:45:45,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:45,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) ca8b5aabef9a5358f93add750f4cbb51c864b7fe' 2024-04-21 00:45:45,567 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:45,570 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-04-21 00:45:45,570 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-04-21 00:45:45,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:45,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-21 00:45:45,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:45,952 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 470 (Movie playing waits for planes) 44025ed69514a02ecbc5d4655d3da7519ebf9170' 2024-04-21 00:45:46,020 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-04-21 00:45:46,021 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:46,026 [ scc.git] DEBUG css/app.css | 22 +++++ 2024-04-21 00:45:46,026 [ scc.git] DEBUG src/events/events.js | 4 + 2024-04-21 00:45:46,026 [ scc.git] DEBUG src/index-dev.html | 6 +- 2024-04-21 00:45:46,026 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 2 +- 2024-04-21 00:45:46,026 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 160 ++++++++++++++++++++++++------------- 2024-04-21 00:45:46,026 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 42 +++++++++- 2024-04-21 00:45:46,027 [ scc.git] DEBUG src/viewers/viewer/source/Image.js | 15 +++- 2024-04-21 00:45:46,027 [ scc.git] DEBUG 7 files changed, 190 insertions(+), 61 deletions(-) 2024-04-21 00:45:46,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:46,334 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-04-21 00:45:46,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:46,347 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-04-21 00:45:46,393 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:46,396 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-04-21 00:45:46,396 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-04-21 00:45:46,396 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-04-21 00:45:46,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:46,741 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:46,786 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:46,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:46,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:46,834 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:46,843 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451c985b0> has no local changes 2024-04-21 00:45:46,844 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:46,857 [ scc.git] DEBUG [detached HEAD 51330e6] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:46,858 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:46,858 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:47,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-04-21 00:45:47,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-04-21 00:45:48,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-04-21 00:45:48,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-21 00:45:49,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:49,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:45:50,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-04-21 00:45:50,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:50,548 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-04-21 00:45:50,548 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:50,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-21 00:45:50,548 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:50,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:50,554 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:50,560 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:50,561 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:50,567 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:50,573 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:50,574 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-04-21 00:45:50,948 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-04-21 00:45:50,949 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-04-21 00:45:50,953 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:50,954 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:50,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:50,959 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-21 00:45:50,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:50,971 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-04-21 00:45:50,982 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:45:50,985 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-04-21 00:45:50,985 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-04-21 00:45:50,985 [ scc.git] DEBUG requirements.txt | 2 +- 2024-04-21 00:45:50,985 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-04-21 00:45:50,985 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-04-21 00:45:50,987 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-04-21 00:45:51,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:51,146 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:51,186 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:51,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:51,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:51,231 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:51,239 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451ccc4f0> has no local changes 2024-04-21 00:45:51,239 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:51,248 [ scc.git] DEBUG [detached HEAD d17833e] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:51,249 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:51,249 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:51,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-04-21 00:45:52,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-04-21 00:45:52,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-04-21 00:45:53,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-21 00:45:53,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:54,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-04-21 00:45:54,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:54,499 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-21 00:45:54,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-04-21 00:45:55,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-04-21 00:45:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-21 00:45:56,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:45:56,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-04-21 00:45:57,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:45:57,220 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-21 00:45:57,221 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:45:57,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-21 00:45:57,221 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:57,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:57,228 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:45:57,234 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:45:57,234 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:45:57,240 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:45:57,246 [ scc.git] DEBUG Already up to date. 2024-04-21 00:45:57,247 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-04-21 00:45:57,779 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-21 00:45:57,780 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-04-21 00:45:57,785 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-04-21 00:45:58,265 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-04-21 00:45:58,265 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-04-21 00:45:58,271 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:45:58,272 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:58,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:58,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-21 00:45:58,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:58,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-21 00:45:58,327 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-04-21 00:45:58,327 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-04-21 00:45:58,327 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-21 00:45:58,327 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-21 00:45:58,327 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:45:58,328 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:45:58,334 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-21 00:45:58,341 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-21 00:45:58,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:58,506 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-04-21 00:45:58,516 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-21 00:45:58,524 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2024-04-21 00:45:58,530 [ scc.config] DEBUG Found github.token 2024-04-21 00:45:58,530 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-04-21 00:45:58,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-21 00:45:58,537 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:58,544 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-21 00:45:58,576 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-04-21 00:45:58,577 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-04-21 00:45:58,577 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-04-21 00:45:58,577 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:45:58,577 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:45:58,585 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-21 00:45:58,594 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-04-21 00:45:58,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:45:58,916 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-04-21 00:45:58,924 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-04-21 00:45:58,930 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-04-21 00:45:58,935 [ scc.config] DEBUG Found github.token 2024-04-21 00:45:58,936 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-04-21 00:45:58,936 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:45:58,978 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:45:58,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:45:58,985 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:45:59,027 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:45:59,035 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451c98550> has no local changes 2024-04-21 00:45:59,035 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:45:59,045 [ scc.git] DEBUG [detached HEAD 3c15734] merge master -Dorg -Ssuccess-only 2024-04-21 00:45:59,045 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:45:59,045 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:45:59,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-04-21 00:45:59,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-04-21 00:45:59,901 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:46:00,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-21 00:46:00,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:01,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:46:01,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-04-21 00:46:02,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:02,254 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-21 00:46:02,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-04-21 00:46:02,725 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:46:03,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-21 00:46:03,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:04,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:46:04,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-04-21 00:46:05,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:05,212 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-21 00:46:05,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-04-21 00:46:05,685 [ scc.repo] DEBUG # ... Include label: dependencies 2024-04-21 00:46:06,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-21 00:46:06,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:07,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:46:07,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-04-21 00:46:08,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:08,119 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-21 00:46:08,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-04-21 00:46:09,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-04-21 00:46:09,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-04-21 00:46:09,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-04-21 00:46:10,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-04-21 00:46:10,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-04-21 00:46:10,958 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:10,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-21 00:46:10,959 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:10,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:10,967 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:10,977 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:10,977 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:10,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:10,993 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:10,993 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-04-21 00:46:11,416 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-21 00:46:11,417 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-04-21 00:46:11,422 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-04-21 00:46:11,788 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-21 00:46:11,789 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-04-21 00:46:11,794 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-04-21 00:46:12,182 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-04-21 00:46:12,182 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-04-21 00:46:12,186 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:12,186 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:12,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:12,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-21 00:46:12,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:12,208 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-04-21 00:46:12,219 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:12,222 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-04-21 00:46:12,222 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-04-21 00:46:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:12,371 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-21 00:46:12,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:12,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-04-21 00:46:12,443 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-21 00:46:12,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:12,448 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-04-21 00:46:12,448 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-04-21 00:46:12,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:12,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-21 00:46:12,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:12,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-04-21 00:46:12,820 [ scc.git] DEBUG Auto-merging package-lock.json 2024-04-21 00:46:12,820 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:12,824 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-04-21 00:46:12,824 [ scc.git] DEBUG package.json | 2 +- 2024-04-21 00:46:12,824 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-04-21 00:46:13,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:13,170 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:13,228 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:13,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:13,237 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:13,289 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:13,301 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451c97fd0> has no local changes 2024-04-21 00:46:13,301 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:13,317 [ scc.git] DEBUG [detached HEAD 6e79564] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:13,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:13,318 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:13,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-04-21 00:46:14,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-04-21 00:46:14,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-21 00:46:15,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:15,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-04-21 00:46:16,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:16,049 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-04-21 00:46:16,049 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:16,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-21 00:46:16,050 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:16,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:16,058 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:16,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:16,070 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:16,079 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:16,090 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:16,091 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-21 00:46:16,473 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-04-21 00:46:16,473 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-21 00:46:16,480 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:16,480 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:16,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:16,489 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-21 00:46:16,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:16,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-04-21 00:46:16,522 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:16,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:16,680 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:16,739 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:16,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:16,746 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:16,822 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:16,833 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945042d340> has no local changes 2024-04-21 00:46:16,834 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:16,845 [ scc.git] DEBUG [detached HEAD 368b87a] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:16,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:16,847 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:17,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-04-21 00:46:17,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-04-21 00:46:18,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-04-21 00:46:18,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-04-21 00:46:19,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-21 00:46:19,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:20,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-04-21 00:46:20,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:20,466 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-21 00:46:20,466 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:20,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-21 00:46:20,466 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:20,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:20,475 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:20,483 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:20,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:20,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:20,500 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:20,500 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-04-21 00:46:20,973 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-04-21 00:46:20,973 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-04-21 00:46:20,982 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:20,982 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:20,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:20,992 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-21 00:46:21,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:21,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-04-21 00:46:21,027 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-04-21 00:46:21,027 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:21,030 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-04-21 00:46:21,030 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-04-21 00:46:21,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:21,191 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:21,236 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:21,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:21,243 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:21,295 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:21,303 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94504805b0> has no local changes 2024-04-21 00:46:21,303 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:21,313 [ scc.git] DEBUG [detached HEAD 5b92357] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:21,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:21,314 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:21,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-04-21 00:46:22,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-04-21 00:46:22,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-04-21 00:46:23,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-21 00:46:23,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:24,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-04-21 00:46:24,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:24,466 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-21 00:46:24,467 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:24,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-21 00:46:24,467 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:24,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:24,475 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:24,484 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:24,484 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:24,491 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:24,499 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:24,499 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-04-21 00:46:24,895 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-04-21 00:46:24,896 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-04-21 00:46:24,902 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:24,902 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:24,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:24,911 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-21 00:46:24,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:24,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-21 00:46:24,963 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-04-21 00:46:24,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-04-21 00:46:24,963 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-04-21 00:46:24,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-04-21 00:46:24,963 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-04-21 00:46:24,963 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-04-21 00:46:24,964 [ scc.git] DEBUG Auto-merging setup.py 2024-04-21 00:46:24,964 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-04-21 00:46:24,964 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:46:24,964 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:46:24,974 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-21 00:46:24,984 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-04-21 00:46:25,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:25,156 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-04-21 00:46:25,164 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-04-21 00:46:25,170 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2024-04-21 00:46:25,176 [ scc.config] DEBUG Found github.token 2024-04-21 00:46:25,176 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-04-21 00:46:25,176 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:25,228 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:25,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:25,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:25,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:25,280 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451cc6df0> has no local changes 2024-04-21 00:46:25,281 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:25,290 [ scc.git] DEBUG [detached HEAD a75557e] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:25,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:25,290 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:25,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-04-21 00:46:26,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-04-21 00:46:26,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-04-21 00:46:27,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-21 00:46:27,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:28,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-04-21 00:46:28,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:28,477 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-21 00:46:28,477 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:28,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-21 00:46:28,478 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:28,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:28,489 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:28,502 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:28,502 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:28,516 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:28,529 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:28,529 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-04-21 00:46:29,070 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-04-21 00:46:29,071 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-04-21 00:46:29,078 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:29,078 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:29,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,089 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-04-21 00:46:29,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-04-21 00:46:29,155 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-04-21 00:46:29,159 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-04-21 00:46:29,162 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-04-21 00:46:29,163 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-04-21 00:46:29,163 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-04-21 00:46:29,164 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-04-21 00:46:29,165 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-04-21 00:46:29,165 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-04-21 00:46:29,166 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-04-21 00:46:29,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:29,326 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:29,404 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:29,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:29,485 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:29,497 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9451c97df0> has no local changes 2024-04-21 00:46:29,498 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:29,514 [ scc.git] DEBUG [detached HEAD 90b704d] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:29,514 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:29,515 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:29,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-04-21 00:46:29,751 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:29,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-21 00:46:29,751 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:29,752 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,764 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:29,777 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:29,778 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:29,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:29,805 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:29,805 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:29,805 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:29,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,819 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:29,896 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:29,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:29,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:29,979 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:29,995 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9450478fa0> has no local changes 2024-04-21 00:46:29,995 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:30,016 [ scc.git] DEBUG [detached HEAD 1d239b6] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:30,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:30,017 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:30,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-04-21 00:46:30,190 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:30,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-21 00:46:30,190 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:30,190 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:30,207 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:30,222 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:30,223 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:30,236 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:30,252 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:30,252 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:30,252 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:30,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:30,265 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:30,340 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:30,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:30,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:30,417 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:30,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9450424f70> has no local changes 2024-04-21 00:46:30,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:30,446 [ scc.git] DEBUG [detached HEAD 99ee414] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:30,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:30,447 [ scc.git] INFO Overriding base-branch from master to main 2024-04-21 00:46:30,447 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:30,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-04-21 00:46:31,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-04-21 00:46:31,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-04-21 00:46:32,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-04-21 00:46:32,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-21 00:46:33,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:33,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-04-21 00:46:33,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-04-21 00:46:34,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:34,391 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-21 00:46:34,391 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:34,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-21 00:46:34,391 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:34,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:34,405 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-04-21 00:46:34,417 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:34,417 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-04-21 00:46:34,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-04-21 00:46:34,443 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:34,444 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-04-21 00:46:34,913 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-04-21 00:46:34,913 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-04-21 00:46:34,919 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:34,920 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:34,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:34,928 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-21 00:46:34,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:34,947 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-21 00:46:34,974 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-04-21 00:46:34,975 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-04-21 00:46:34,975 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:46:34,975 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:46:34,983 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-21 00:46:34,991 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-04-21 00:46:35,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:35,155 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-04-21 00:46:35,164 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-04-21 00:46:35,174 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-04-21 00:46:35,183 [ scc.config] DEBUG Found github.token 2024-04-21 00:46:35,184 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-04-21 00:46:35,184 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:35,252 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:35,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:35,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:35,339 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:35,349 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9450406430> has no local changes 2024-04-21 00:46:35,350 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:35,363 [ scc.git] DEBUG [detached HEAD 7153911] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:35,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:35,363 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:35,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-04-21 00:46:35,591 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:35,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-21 00:46:35,591 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:35,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:35,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:35,611 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:35,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:35,619 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:35,628 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:35,628 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:35,628 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:35,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:35,649 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:35,706 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:35,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:35,717 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:35,775 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:35,786 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9450442e50> has no local changes 2024-04-21 00:46:35,786 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:35,798 [ scc.git] DEBUG [detached HEAD c808637] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:35,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:35,799 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:36,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-04-21 00:46:36,016 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:36,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-21 00:46:36,016 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:36,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:36,025 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:36,034 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:36,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:36,045 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:36,076 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:36,076 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:36,077 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:36,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:36,092 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:36,155 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:36,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:36,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:36,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:36,259 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945034e940> has no local changes 2024-04-21 00:46:36,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:36,277 [ scc.git] DEBUG [detached HEAD 1c6fa44] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:36,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:36,279 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:36,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-04-21 00:46:36,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-04-21 00:46:37,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-04-21 00:46:37,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-21 00:46:38,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:38,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-04-21 00:46:39,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:39,248 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-04-21 00:46:39,248 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:39,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-21 00:46:39,248 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:39,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:39,259 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-04-21 00:46:39,266 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:39,267 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-04-21 00:46:39,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-04-21 00:46:39,283 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:39,284 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-04-21 00:46:39,691 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-04-21 00:46:39,692 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-04-21 00:46:39,697 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:39,697 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:39,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:39,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-21 00:46:39,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:39,718 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-21 00:46:39,758 [ scc.git] DEBUG Auto-merging Dockerfile 2024-04-21 00:46:39,758 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-04-21 00:46:39,758 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:46:39,759 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:46:39,766 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-21 00:46:39,775 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-04-21 00:46:39,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:39,922 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-04-21 00:46:39,935 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-04-21 00:46:39,945 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-04-21 00:46:39,953 [ scc.config] DEBUG Found github.token 2024-04-21 00:46:39,954 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-04-21 00:46:39,954 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:40,003 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:40,003 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:40,012 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:40,093 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:40,106 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f94503959d0> has no local changes 2024-04-21 00:46:40,107 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:40,118 [ scc.git] DEBUG [detached HEAD 940da78] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:40,120 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:40,121 [ scc.git] INFO Overriding base-branch from master to develop 2024-04-21 00:46:40,121 [ scc.repo] DEBUG ## PRs found: 2024-04-21 00:46:40,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-04-21 00:46:40,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-04-21 00:46:41,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-04-21 00:46:41,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-04-21 00:46:42,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-04-21 00:46:42,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-04-21 00:46:43,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-04-21 00:46:43,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-21 00:46:44,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-04-21 00:46:44,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-04-21 00:46:45,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-04-21 00:46:45,114 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-21 00:46:45,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-04-21 00:46:46,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-04-21 00:46:46,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-04-21 00:46:46,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-04-21 00:46:46,998 [ scc.repo] DEBUG ## Branches found: 2024-04-21 00:46:46,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-21 00:46:46,998 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:46,998 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:47,006 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-04-21 00:46:47,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-04-21 00:46:47,016 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-04-21 00:46:47,025 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-04-21 00:46:47,034 [ scc.git] DEBUG Already up to date. 2024-04-21 00:46:47,034 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-04-21 00:46:47,490 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-04-21 00:46:47,490 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-04-21 00:46:47,496 [ scc.git] DEBUG ## Unique users: [] 2024-04-21 00:46:47,496 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:47,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:47,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-21 00:46:47,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:47,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-21 00:46:47,579 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-04-21 00:46:47,579 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-04-21 00:46:47,579 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-04-21 00:46:47,580 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-04-21 00:46:47,589 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-21 00:46:47,599 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-04-21 00:46:47,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:47,769 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-04-21 00:46:47,781 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-04-21 00:46:47,790 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#37](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-04-21 00:46:47,799 [ scc.config] DEBUG Found github.token 2024-04-21 00:46:47,800 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-04-21 00:46:47,800 [ scc.git] DEBUG Calling 'git submodule update' 2024-04-21 00:46:47,846 [ scc.git] DEBUG Get sha1 of %s 2024-04-21 00:46:47,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-04-21 00:46:47,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:47,899 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:47,909 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f945034ebb0> has no local changes 2024-04-21 00:46:47,909 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:47,924 [ scc.git] DEBUG [detached HEAD 74791c0] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:47,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:47,924 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-04-21 00:46:48,019 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-04-21 00:46:48,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:48,198 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-04-21 00:46:48,207 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-04-21 00:46:48,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:48,606 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-04-21 00:46:48,613 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-04-21 00:46:48,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:49,009 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-04-21 00:46:49,020 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-04-21 00:46:49,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:49,418 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-04-21 00:46:49,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:49,837 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-04-21 00:46:49,843 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-04-21 00:46:50,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:50,229 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-04-21 00:46:50,243 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-04-21 00:46:50,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:50,634 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-04-21 00:46:50,639 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-04-21 00:46:51,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:51,042 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-04-21 00:46:51,049 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-04-21 00:46:51,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:51,464 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-04-21 00:46:51,473 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-04-21 00:46:51,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:51,876 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-04-21 00:46:51,882 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-04-21 00:46:52,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:52,281 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-04-21 00:46:52,294 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-04-21 00:46:52,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:52,683 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-04-21 00:46:52,695 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-04-21 00:46:53,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:53,077 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-04-21 00:46:53,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:53,493 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-04-21 00:46:53,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:53,880 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-04-21 00:46:53,886 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-04-21 00:46:54,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:54,327 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-04-21 00:46:54,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:54,730 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-04-21 00:46:55,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:55,134 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-04-21 00:46:55,144 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-04-21 00:46:55,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:55,552 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-04-21 00:46:55,563 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-04-21 00:46:55,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:55,965 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-04-21 00:46:55,981 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-04-21 00:46:56,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:56,380 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-04-21 00:46:56,395 [ scc.config] DEBUG Found submodule.scripts.url 2024-04-21 00:46:56,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-04-21 00:46:56,777 [ scc.config] DEBUG Found submodule.scripts.branch 2024-04-21 00:46:56,777 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-04-21 00:46:56,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9455172460> has local changes 2024-04-21 00:46:56,907 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 549 will-moore 'Inset feature' (stage: draft) - PR 543 will-moore 'Plate well labels' (stage: draft) Updating ded0caab..87d179a0 Previously merged: Merged PRs: - PR 477 will-moore 'Vite' - PR 553 sbesson 'Figure_To_Pdf: use max plane size to select the appropriate zoom level' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 470 will-moore 'Movie playing waits for planes' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#37 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/37/)' 2024-04-21 00:46:56,929 [ scc.git] DEBUG [detached HEAD 2212a3f] merge master -Dorg -Ssuccess-only 2024-04-21 00:46:56,929 [ scc.merge] INFO Repository: ome/omero-plugins 2024-04-21 00:46:56,930 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-04-21 00:46:56,930 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,930 [ scc.merge] INFO 2024-04-21 00:46:56,930 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,930 [ scc.merge] INFO - PR 362 dependabot[bot] 'Bump scripts from `2078ac7` to `5a90893`' 2024-04-21 00:46:56,930 [ scc.merge] INFO 2024-04-21 00:46:56,930 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-04-21 00:46:56,930 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,930 [ scc.merge] INFO 2024-04-21 00:46:56,930 [ scc.merge] INFO 2024-04-21 00:46:56,930 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-04-21 00:46:56,931 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-04-21 00:46:56,931 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,931 [ scc.merge] INFO 2024-04-21 00:46:56,931 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-04-21 00:46:56,931 [ scc.merge] INFO 2024-04-21 00:46:56,931 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-04-21 00:46:56,931 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-04-21 00:46:56,931 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,931 [ scc.merge] INFO 2024-04-21 00:46:56,931 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-04-21 00:46:56,931 [ scc.merge] INFO 2024-04-21 00:46:56,931 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-04-21 00:46:56,931 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-21 00:46:56,931 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-04-21 00:46:56,931 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Repository: ome/omero-figure 2024-04-21 00:46:56,932 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' (stage: draft) 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-04-21 00:46:56,932 [ scc.merge] INFO Updating ded0caab..87d179a0 2024-04-21 00:46:56,932 [ scc.merge] INFO Previously merged: 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 477 will-moore 'Vite' 2024-04-21 00:46:56,932 [ scc.merge] INFO - PR 553 sbesson 'Figure_To_Pdf: use max plane size to select the appropriate zoom level' 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-04-21 00:46:56,932 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,932 [ scc.merge] INFO 2024-04-21 00:46:56,932 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-04-21 00:46:56,933 [ scc.merge] INFO 2024-04-21 00:46:56,933 [ scc.merge] INFO Repository: ome/omero-gallery 2024-04-21 00:46:56,933 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,933 [ scc.merge] INFO 2024-04-21 00:46:56,933 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-04-21 00:46:56,933 [ scc.merge] INFO 2024-04-21 00:46:56,933 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-04-21 00:46:56,933 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-04-21 00:46:56,933 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,933 [ scc.merge] INFO 2024-04-21 00:46:56,933 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 470 will-moore 'Movie playing waits for planes' 2024-04-21 00:46:56,933 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-04-21 00:46:56,933 [ scc.merge] INFO 2024-04-21 00:46:56,933 [ scc.merge] INFO Repository: ome/omero-mapr 2024-04-21 00:46:56,934 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-04-21 00:46:56,934 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,934 [ scc.merge] INFO 2024-04-21 00:46:56,934 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-04-21 00:46:56,934 [ scc.merge] INFO 2024-04-21 00:46:56,934 [ scc.merge] INFO Repository: ome/omero-metadata 2024-04-21 00:46:56,934 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,934 [ scc.merge] INFO 2024-04-21 00:46:56,934 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-04-21 00:46:56,934 [ scc.merge] INFO 2024-04-21 00:46:56,934 [ scc.merge] INFO Repository: ome/omero-parade 2024-04-21 00:46:56,934 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-04-21 00:46:56,934 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-04-21 00:46:56,934 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,935 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,935 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-04-21 00:46:56,935 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,935 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,935 [ scc.merge] INFO Repository: ome/omero-rois 2024-04-21 00:46:56,935 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-04-21 00:46:56,935 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,935 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,935 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-04-21 00:46:56,935 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Repository: ome/omero-signup 2024-04-21 00:46:56,936 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,936 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-04-21 00:46:56,936 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Merged PRs: 2024-04-21 00:46:56,936 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Repository: ome/omero-upload 2024-04-21 00:46:56,936 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-04-21 00:46:56,936 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,936 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-04-21 00:46:56,937 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,937 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-04-21 00:46:56,937 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,937 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-04-21 00:46:56,937 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-04-21 00:46:56,937 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-04-21 00:46:56,937 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,937 [ scc.merge] INFO 2024-04-21 00:46:56,937 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-04-21 00:46:56,938 [ scc.merge] INFO 2024-04-21 00:46:56,938 [ scc.merge] INFO Repository: ome/scripts 2024-04-21 00:46:56,938 [ scc.merge] INFO Excluded PRs: 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-04-21 00:46:56,938 [ scc.merge] INFO Already up to date. 2024-04-21 00:46:56,938 [ scc.merge] INFO 2024-04-21 00:46:56,938 [ scc.merge] INFO Conflicting PRs (not included): 2024-04-21 00:46:56,938 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-04-21 00:46:56,938 [ scc.merge] INFO 2024-04-21 00:46:56,938 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-04-21 00:46:56,939 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-04-21 00:46:56,954 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,965 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:56,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-04-21 00:46:56,966 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:56,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-04-21 00:46:56,975 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:56,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-04-21 00:46:56,983 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:56,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-04-21 00:46:56,991 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:56,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:56,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-04-21 00:46:56,999 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,006 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-04-21 00:46:57,006 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-04-21 00:46:57,013 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-04-21 00:46:57,019 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-04-21 00:46:57,025 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,030 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,031 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-04-21 00:46:57,031 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,036 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-04-21 00:46:57,036 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,041 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-04-21 00:46:57,041 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-04-21 00:46:57,048 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-04-21 00:46:57,054 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-04-21 00:46:57,060 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-04-21 00:46:57,066 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-04-21 00:46:57,072 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-04-21 00:46:57,079 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-04-21 00:46:57,092 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-04-21 00:46:57,103 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-04-21 00:46:57,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-04-21 00:46:57,114 [ scc.git] DEBUG Calling 'git remote' 2024-04-21 00:46:57,124 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.8.2 to 5.9.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 27ea3aa] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ded0caab nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 9d8d147 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD b473f15] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-04-21 00:47:49,517 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-04-21 00:47:58,316 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-04-21 00:48:00,662 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-21 00:48:05,264 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-04-21 00:48:51,514 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS