Started by upstream project "Trigger" build number 57 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/e9d96de4efbb3e39a2ce24824e54985c7c2760a6ed46c5415ea0aa1fd1e18d41/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.52.0' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 53 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + tar -zxf - + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.2.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.2.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.5 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (45 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.7.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-50.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.1.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (217 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB) Using cached idna-3.18-py3-none-any.whl (65 kB) Using cached certifi-2026.7.22-py3-none-any.whl (136 kB) Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.7.22 cffi-2.1.1 charset_normalizer-3.5.1 cryptography-50.0.0 future-1.0.0 idna-3.18 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.16.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-08-16 01:31:06,324 [ scc.config] DEBUG Found github.token 2026-08-16 01:31:06,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-16 01:31:06,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:31:07,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:31:07,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-16 01:31:07,457 [ scc.gh] DEBUG 4952 remaining from 5000 (Reset at 01:08 2026-08-16 01:31:07,458 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:31:07,472 [ scc.git] DEBUG Check current status 2026-08-16 01:31:07,472 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:31:07,499 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-16 01:31:07,500 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:31:07,735 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-16 01:31:07,810 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-16 01:31:07,889 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-16 01:31:07,936 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-16 01:31:07,994 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-16 01:31:08,119 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-16 01:31:08,146 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-16 01:31:08,177 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-16 01:31:08,224 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-16 01:31:08,279 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-16 01:31:08,345 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-16 01:31:08,387 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-16 01:31:08,433 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-16 01:31:08,477 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-16 01:31:08,547 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-16 01:31:08,590 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-16 01:31:08,657 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-16 01:31:08,703 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-16 01:31:08,767 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-16 01:31:08,792 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-16 01:31:08,835 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-16 01:31:08,863 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-16 01:31:08,935 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:31:09,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-16 01:31:09,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:31:10,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:31:10,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:31:11,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:31:11,449 [ scc.git] DEBUG Resetting... 2026-08-16 01:31:11,449 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-16 01:31:12,041 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-16 01:31:12,043 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-16 01:31:14,942 [ scc.git] DEBUG Check current status 2026-08-16 01:31:14,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:31:14,968 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-08-16 01:31:14,969 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:31:15,186 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-16 01:31:15,219 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-16 01:31:15,253 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-16 01:31:15,290 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-16 01:31:15,338 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-08-16 01:31:15,370 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-16 01:31:15,407 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-16 01:31:15,472 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d46) 2026-08-16 01:31:15,513 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-16 01:31:15,560 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-16 01:31:15,599 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-16 01:31:15,637 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-16 01:31:15,678 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-16 01:31:15,717 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-16 01:31:15,757 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-16 01:31:15,798 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-16 01:31:15,835 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-16 01:31:15,870 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-16 01:31:15,903 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-16 01:31:15,937 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-16 01:31:15,971 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-16 01:31:15,991 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-08-16 01:31:15,992 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-16 01:31:15,992 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-16 01:31:15,992 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-16 01:31:15,992 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-16 01:31:15,992 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-16 01:31:15,993 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:31:16,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-16 01:31:16,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-16 01:31:16,854 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:31:16,854 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-16 01:31:17,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-16 01:31:17,437 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:31:17,437 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-16 01:31:17,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-16 01:31:17,978 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:31:17,978 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-16 01:31:17,978 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:31:17,978 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:31:17,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:18,016 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:31:18,046 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:31:18,046 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:31:18,078 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:31:18,229 [ scc.git] DEBUG Already up to date. 2026-08-16 01:31:18,229 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-16 01:31:18,816 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:31:18,816 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-16 01:31:19,222 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-16 01:31:19,697 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:31:19,697 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-16 01:31:19,769 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-16 01:31:20,246 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:31:20,246 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-16 01:31:20,278 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:31:20,278 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:31:20,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:20,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-16 01:31:20,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:20,338 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-16 01:31:22,167 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:31:22,317 [ scc.git] DEBUG scripts | 2 +- 2026-08-16 01:31:22,317 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:31:22,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:31:22,537 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-16 01:31:22,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:22,617 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-16 01:31:23,938 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:31:25,182 [ scc.git] DEBUG omero-figure | 2 +- 2026-08-16 01:31:25,182 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:31:25,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:31:25,369 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-16 01:31:25,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:25,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-16 01:31:26,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:31:27,100 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-08-16 01:31:27,100 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:31:27,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:31:27,297 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:31:29,050 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-16 01:31:33,492 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-16 01:31:36,208 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-16 01:31:36,209 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:31:36,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:31:36,257 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:31:40,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f65aa091bd0> has no local changes 2026-08-16 01:31:40,906 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:31:44,443 [ scc.git] DEBUG [detached HEAD bf471c2] merge master -Dorg -Snone 2026-08-16 01:31:44,446 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-16 01:31:44,446 [ scc.merge] INFO Already up to date. 2026-08-16 01:31:44,446 [ scc.merge] INFO 2026-08-16 01:31:44,446 [ scc.merge] INFO Merged PRs: 2026-08-16 01:31:44,446 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-16 01:31:44,446 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-16 01:31:44,446 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-16 01:31:44,446 [ scc.merge] INFO 2026-08-16 01:31:44,446 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-16 01:31:44,446 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '5124b647d21f06160f18a6858629a341c41a730e' Submodule path 'omero-iviewer': checked out '3af5a3461d5bbae51d9026388abf0139a32474ea' Submodule path 'omero-metadata': checked out '6a653e49e3589ccb463166506896639f6f0a5a2b' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-08-16 01:32:33,044 [ scc.config] DEBUG Found github.token 2026-08-16 01:32:33,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-08-16 01:32:33,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:32:33,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:32:34,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-08-16 01:32:34,209 [ scc.gh] DEBUG 4952 remaining from 5000 (Reset at 01:08 2026-08-16 01:32:34,209 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:34,222 [ scc.git] DEBUG Check current status 2026-08-16 01:32:34,222 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:34,247 [ scc.git] DEBUG bf471c2 merge master -Dorg -Snone 2026-08-16 01:32:34,248 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:34,442 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-16 01:32:34,475 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-16 01:32:34,510 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-08-16 01:32:34,549 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-08-16 01:32:34,616 [ scc.git] DEBUG +5124b647d21f06160f18a6858629a341c41a730e omero-figure (v8.0.1.rc2-22-g5124b647) 2026-08-16 01:32:34,651 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-16 01:32:34,682 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-16 01:32:34,749 [ scc.git] DEBUG +3af5a3461d5bbae51d9026388abf0139a32474ea omero-iviewer (v0.18.0-7-g3af5a346) 2026-08-16 01:32:34,787 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-16 01:32:34,836 [ scc.git] DEBUG +6a653e49e3589ccb463166506896639f6f0a5a2b omero-metadata (v0.14.0-2-g6a653e4) 2026-08-16 01:32:34,873 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-16 01:32:34,909 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-16 01:32:34,943 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-08-16 01:32:34,981 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-16 01:32:35,016 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-08-16 01:32:35,045 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-16 01:32:35,076 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-08-16 01:32:35,107 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-08-16 01:32:35,143 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-16 01:32:35,182 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-16 01:32:35,217 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-16 01:32:35,239 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-08-16 01:32:35,259 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:35,259 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-08-16 01:32:35,262 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-08-16 01:32:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-08-16 01:32:36,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:36,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:37,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:37,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:37,487 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:37,706 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-16 01:32:37,706 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:37,746 [ scc.git] DEBUG Check current status 2026-08-16 01:32:37,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:37,784 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-08-16 01:32:37,786 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:37,948 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:38,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-08-16 01:32:38,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:39,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:39,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:40,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:40,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:40,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:40,405 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-16 01:32:40,405 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:40,424 [ scc.git] DEBUG Check current status 2026-08-16 01:32:40,424 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:40,464 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-08-16 01:32:40,465 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:40,610 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:40,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-08-16 01:32:41,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:41,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:42,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:42,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:42,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:43,092 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:43,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-16 01:32:43,093 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:44,299 [ scc.git] DEBUG Check current status 2026-08-16 01:32:44,308 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:44,356 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-08-16 01:32:44,357 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:44,537 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:44,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-08-16 01:32:45,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:45,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:46,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:46,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:46,806 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:46,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:46,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-16 01:32:46,967 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:47,017 [ scc.git] DEBUG Check current status 2026-08-16 01:32:47,017 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:47,064 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-16 01:32:47,065 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:47,213 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:47,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-08-16 01:32:48,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:48,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:48,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:49,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:49,385 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:49,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:49,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-16 01:32:49,494 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:49,532 [ scc.git] DEBUG Check current status 2026-08-16 01:32:49,532 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:49,633 [ scc.git] DEBUG 5124b647 Merge pull request #701 from will-moore/bump_nanoid-3.3.18 2026-08-16 01:32:49,634 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:49,780 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:50,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-08-16 01:32:50,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:51,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:51,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:51,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:51,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:52,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:52,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-16 01:32:52,101 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:52,144 [ scc.git] DEBUG Check current status 2026-08-16 01:32:52,144 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:52,185 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-08-16 01:32:52,186 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:52,361 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:52,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-08-16 01:32:53,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:53,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:54,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:54,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:54,568 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:54,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:54,677 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-16 01:32:54,677 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:54,701 [ scc.git] DEBUG Check current status 2026-08-16 01:32:54,701 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:54,733 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-08-16 01:32:54,734 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:54,856 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:55,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-08-16 01:32:55,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:56,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:56,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:57,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:57,003 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:57,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:57,128 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-16 01:32:57,129 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:57,146 [ scc.git] DEBUG Check current status 2026-08-16 01:32:57,146 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:57,188 [ scc.git] DEBUG 3af5a346 Merge pull request #559 from ome/dependabot/npm_and_yarn/multi-392a5e4999 2026-08-16 01:32:57,190 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:57,332 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:32:57,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-08-16 01:32:58,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:32:58,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:32:59,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:32:59,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:32:59,518 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:32:59,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:32:59,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-16 01:32:59,634 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:32:59,654 [ scc.git] DEBUG Check current status 2026-08-16 01:32:59,654 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:32:59,683 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-08-16 01:32:59,685 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:32:59,821 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:00,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-08-16 01:33:00,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:01,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:01,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:02,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:02,027 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:02,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:02,155 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-16 01:33:02,155 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:02,180 [ scc.git] DEBUG Check current status 2026-08-16 01:33:02,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:02,223 [ scc.git] DEBUG 6a653e4 Fix workflow permission indentation 2026-08-16 01:33:02,223 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:02,355 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:02,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-08-16 01:33:03,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:03,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:04,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:04,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:04,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:04,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:04,729 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-16 01:33:04,730 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:04,747 [ scc.git] DEBUG Check current status 2026-08-16 01:33:04,747 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:04,775 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-08-16 01:33:04,776 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:04,900 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:05,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-08-16 01:33:05,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:06,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:06,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:07,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:07,095 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:07,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:07,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-16 01:33:07,228 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:07,268 [ scc.git] DEBUG Check current status 2026-08-16 01:33:07,268 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:07,300 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-08-16 01:33:07,301 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:07,444 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:07,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-08-16 01:33:08,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:08,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:09,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:09,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:09,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:09,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:09,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-16 01:33:09,715 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:09,732 [ scc.git] DEBUG Check current status 2026-08-16 01:33:09,732 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:09,757 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-08-16 01:33:09,758 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:09,889 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:10,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-08-16 01:33:11,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:11,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:11,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:12,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:12,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:12,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:12,516 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-16 01:33:12,516 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:12,547 [ scc.git] DEBUG Check current status 2026-08-16 01:33:12,547 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:12,579 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-08-16 01:33:12,580 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:12,723 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:13,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-08-16 01:33:13,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:13,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:14,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:14,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:14,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:15,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:15,007 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-16 01:33:15,008 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:15,086 [ scc.git] DEBUG Check current status 2026-08-16 01:33:15,086 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:15,157 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-08-16 01:33:15,158 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:15,991 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:16,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-16 01:33:16,196 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-16 01:33:16,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-08-16 01:33:17,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:17,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:17,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:18,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:18,429 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:18,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:18,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-16 01:33:18,548 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:18,568 [ scc.git] DEBUG Check current status 2026-08-16 01:33:18,569 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:18,598 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-08-16 01:33:18,600 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:18,748 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:19,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-08-16 01:33:19,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:20,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:20,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:20,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:20,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:21,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:21,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-16 01:33:21,109 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:21,135 [ scc.git] DEBUG Check current status 2026-08-16 01:33:21,135 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:21,155 [ scc.git] DEBUG 160d894 Fix display of code 2026-08-16 01:33:21,155 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:21,282 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:21,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-08-16 01:33:22,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:22,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:22,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:23,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:23,427 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:23,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:23,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-16 01:33:23,558 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:23,588 [ scc.git] DEBUG Check current status 2026-08-16 01:33:23,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:23,623 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-16 01:33:23,624 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:23,773 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:23,774 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-08-16 01:33:24,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-08-16 01:33:24,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:25,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:25,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:25,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:25,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:26,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:26,091 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-16 01:33:26,092 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:26,116 [ scc.git] DEBUG Check current status 2026-08-16 01:33:26,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:26,143 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-08-16 01:33:26,144 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:26,270 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:26,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-16 01:33:26,479 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-16 01:33:26,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-08-16 01:33:27,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:27,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:28,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:28,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:28,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:28,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:28,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-16 01:33:28,788 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:28,830 [ scc.git] DEBUG Check current status 2026-08-16 01:33:28,830 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:28,855 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-08-16 01:33:28,856 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:28,995 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:29,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-16 01:33:29,196 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-16 01:33:29,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-08-16 01:33:29,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:30,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:30,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:31,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:31,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:31,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:31,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-16 01:33:31,527 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:31,564 [ scc.git] DEBUG Check current status 2026-08-16 01:33:31,565 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:31,593 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-08-16 01:33:31,594 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:31,724 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:31,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-08-16 01:33:32,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:32,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:33,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:33,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:33,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:34,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:34,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-16 01:33:34,033 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-08-16 01:33:34,061 [ scc.git] DEBUG Check current status 2026-08-16 01:33:34,061 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:34,099 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-08-16 01:33:34,100 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:34,247 [ scc.config] DEBUG Found remote.origin.url 2026-08-16 01:33:34,247 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-08-16 01:33:34,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-16 01:33:34,444 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-16 01:33:34,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-08-16 01:33:35,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-08-16 01:33:35,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-08-16 01:33:36,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-08-16 01:33:36,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-08-16 01:33:36,570 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:33:36,674 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:33:36,674 [ scc.git] DEBUG Resetting... 2026-08-16 01:33:36,674 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-08-16 01:33:37,081 [ scc.git] DEBUG HEAD is now at bf471c2 merge master -Dorg -Snone 2026-08-16 01:33:37,082 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-08-16 01:33:38,309 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-08-16 01:33:39,001 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-08-16 01:33:43,325 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-08-16 01:33:44,803 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-08-16 01:33:45,635 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-08-16 01:33:46,849 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-08-16 01:33:47,509 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-08-16 01:33:48,394 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-08-16 01:33:48,937 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-08-16 01:33:49,993 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-08-16 01:33:50,013 [ scc.git] DEBUG Check current status 2026-08-16 01:33:50,013 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-08-16 01:33:50,039 [ scc.git] DEBUG bf471c2 merge master -Dorg -Snone 2026-08-16 01:33:50,039 [ scc.git] DEBUG Calling 'git submodule status' 2026-08-16 01:33:50,231 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-08-16 01:33:50,271 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-08-16 01:33:50,301 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-08-16 01:33:50,337 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-08-16 01:33:50,375 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-08-16 01:33:50,413 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-08-16 01:33:50,454 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-08-16 01:33:50,513 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798cee) 2026-08-16 01:33:50,548 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-08-16 01:33:50,591 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-08-16 01:33:50,624 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-08-16 01:33:50,660 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-08-16 01:33:50,691 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-08-16 01:33:50,724 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-08-16 01:33:50,758 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-08-16 01:33:50,790 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-08-16 01:33:50,820 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-08-16 01:33:50,864 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-08-16 01:33:50,887 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-08-16 01:33:50,919 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-08-16 01:33:50,954 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-08-16 01:33:50,980 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-08-16 01:33:50,995 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-08-16 01:33:50,995 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-08-16 01:33:50,995 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-08-16 01:33:50,995 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-08-16 01:33:50,995 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-08-16 01:33:50,995 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:33:50,995 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-08-16 01:33:51,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-08-16 01:33:51,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-08-16 01:33:51,988 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:33:52,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-16 01:33:53,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:33:53,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-08-16 01:33:54,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:33:54,297 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-16 01:33:54,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-08-16 01:33:54,961 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:33:55,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-16 01:33:56,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:33:56,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-08-16 01:33:57,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:33:57,332 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-16 01:33:57,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-08-16 01:33:57,845 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:33:58,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-16 01:33:59,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:33:59,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:00,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:34:00,001 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-16 01:34:00,001 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:34:00,001 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:00,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:00,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:34:00,039 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:34:00,039 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:34:00,072 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:34:00,156 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:00,156 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-08-16 01:34:00,629 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:34:00,630 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-08-16 01:34:00,658 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-08-16 01:34:01,097 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:34:01,097 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-08-16 01:34:01,121 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-08-16 01:34:01,612 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-08-16 01:34:01,612 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-08-16 01:34:01,641 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:34:01,641 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:01,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:01,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-16 01:34:01,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:01,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-08-16 01:34:01,752 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:01,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:34:01,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-16 01:34:02,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:02,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-08-16 01:34:02,065 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:02,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:34:02,581 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-16 01:34:02,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:02,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-08-16 01:34:02,673 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:03,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:34:03,023 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:34:03,955 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:03,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:03,968 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:34:04,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-08-16 01:34:04,200 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:34:04,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-16 01:34:04,200 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:04,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:04,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:34:04,236 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:34:04,236 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:34:04,259 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:34:04,338 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:04,338 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:34:04,338 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:04,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:04,359 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:34:04,485 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:04,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:04,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:34:04,618 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:34:04,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f0a62d0> has no local changes 2026-08-16 01:34:04,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:34:04,876 [ scc.git] DEBUG [detached HEAD cfa0461] merge master -Dorg -Ssuccess-only 2026-08-16 01:34:04,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:34:04,878 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:34:05,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-08-16 01:34:05,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-08-16 01:34:05,713 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:34:06,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:06,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:07,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:07,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:08,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:34:08,298 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:34:08,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-08-16 01:34:09,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-08-16 01:34:09,323 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:34:09,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-16 01:34:09,323 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:09,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:09,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:34:09,352 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:34:09,352 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:34:09,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:34:09,432 [ scc.git] DEBUG Already up to date. 2026-08-16 01:34:09,433 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-08-16 01:34:09,885 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-08-16 01:34:09,885 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-08-16 01:34:09,906 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:34:09,906 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:09,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:09,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-16 01:34:09,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:09,951 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-08-16 01:34:10,168 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:34:10,243 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:34:10,243 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:34:10,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:34:10,437 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:34:10,577 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:10,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:10,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:34:10,698 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:34:10,774 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424ef28750> has no local changes 2026-08-16 01:34:10,774 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:34:10,997 [ scc.git] DEBUG [detached HEAD 13ee92d] merge master -Dorg -Ssuccess-only 2026-08-16 01:34:10,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:34:10,998 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:34:11,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-08-16 01:34:11,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-08-16 01:34:12,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-08-16 01:34:12,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:13,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:14,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:14,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:14,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:34:14,991 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-08-16 01:34:15,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-08-16 01:34:15,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-08-16 01:34:15,978 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:34:15,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-16 01:34:15,978 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:15,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:16,188 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:34:17,123 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:34:17,123 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:34:17,324 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:34:18,837 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-08-16 01:34:19,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-08-16 01:34:20,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-08-16 01:34:20,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-08-16 01:34:21,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-08-16 01:34:21,731 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-08-16 01:34:23,311 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-08-16 01:34:23,311 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-08-16 01:34:23,371 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:34:23,371 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:23,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:23,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-16 01:34:23,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:23,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-08-16 01:34:23,761 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-08-16 01:34:23,916 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:34:24,021 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-08-16 01:34:24,021 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-08-16 01:34:24,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:34:24,212 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:34:24,316 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:24,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:24,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:34:24,446 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:34:24,522 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1d89d0> has no local changes 2026-08-16 01:34:24,522 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:34:24,717 [ scc.git] DEBUG [detached HEAD 50f2947] merge master -Dorg -Ssuccess-only 2026-08-16 01:34:24,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:34:24,720 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:34:25,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-08-16 01:34:25,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-08-16 01:34:26,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:26,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:27,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:28,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:28,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/eeaeaa9e3789fce6809def20cd9a43f37f61668f?per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:29,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:29,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/eeaeaa9e3789fce6809def20cd9a43f37f61668f/status HTTP/1.1" 200 None 2026-08-16 01:34:29,678 [ scc.repo] DEBUG - PR 196 will-moore 'Storage options only if needed' 2026-08-16 01:34:30,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-08-16 01:34:30,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:31,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:31,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:32,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-08-16 01:34:32,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:33,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:33,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:34,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:34,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:35,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:35,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-08-16 01:34:35,662 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-08-16 01:34:36,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-08-16 01:34:36,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-08-16 01:34:37,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:37,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:38,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:38,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:39,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:39,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:40,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-08-16 01:34:40,283 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-16 01:34:40,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-08-16 01:34:41,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-08-16 01:34:41,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-08-16 01:34:42,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-08-16 01:34:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:43,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:43,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:44,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:44,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:45,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:45,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-08-16 01:34:45,890 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-16 01:34:46,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-08-16 01:34:46,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-08-16 01:34:47,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:47,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:48,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:34:48,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:49,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-08-16 01:34:50,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-08-16 01:34:50,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-08-16 01:34:50,535 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-08-16 01:34:51,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-08-16 01:34:51,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-08-16 01:34:52,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-08-16 01:34:52,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-08-16 01:34:53,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-08-16 01:34:53,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-08-16 01:34:53,614 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:34:53,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-16 01:34:53,615 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:34:53,615 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:34:53,653 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:34:53,689 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:34:53,689 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:34:53,890 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:34:54,797 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-08-16 01:34:55,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-08-16 01:34:56,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-08-16 01:34:57,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-08-16 01:34:57,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-08-16 01:34:58,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-08-16 01:34:59,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-08-16 01:35:00,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-08-16 01:35:00,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-08-16 01:35:01,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-08-16 01:35:02,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-08-16 01:35:03,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-08-16 01:35:04,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-08-16 01:35:04,220 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-08-16 01:35:05,161 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-16 01:35:05,161 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-08-16 01:35:05,220 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-08-16 01:35:06,067 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-16 01:35:06,067 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-08-16 01:35:06,106 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-08-16 01:35:06,612 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-16 01:35:06,613 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-08-16 01:35:06,665 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-08-16 01:35:07,177 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-16 01:35:07,178 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-08-16 01:35:07,228 [ scc.git] DEBUG Calling 'git fetch origin pull/196/head' 2026-08-16 01:35:07,940 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-08-16 01:35:07,941 [ scc.git] DEBUG * branch refs/pull/196/head -> FETCH_HEAD 2026-08-16 01:35:08,031 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:35:08,031 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:35:08,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:08,058 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-16 01:35:08,136 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:08,160 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-16 01:35:09,250 [ scc.git] DEBUG Auto-merging README.rst 2026-08-16 01:35:09,251 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-16 01:35:09,251 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-16 01:35:09,293 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:35:09,294 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:35:09,331 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:09,618 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-16 01:35:09,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:35:09,804 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-08-16 01:35:09,875 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:09,897 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/util.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py --conflicts 2026-08-16 01:35:09,949 [ scc.config] DEBUG Found github.token 2026-08-16 01:35:09,949 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-08-16 01:35:09,949 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-16 01:35:10,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:10,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-16 01:35:10,949 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-08-16 01:35:10,949 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-08-16 01:35:10,950 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-08-16 01:35:10,950 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-08-16 01:35:11,008 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:35:11,009 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:35:11,040 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:11,363 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-16 01:35:11,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:35:11,566 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-08-16 01:35:11,601 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:11,629 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-08-16 01:35:11,651 [ scc.config] DEBUG Found github.token 2026-08-16 01:35:11,651 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-08-16 01:35:11,651 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-16 01:35:11,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:11,701 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-16 01:35:12,184 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-08-16 01:35:12,184 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-16 01:35:12,184 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-08-16 01:35:12,184 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-08-16 01:35:12,184 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-08-16 01:35:12,254 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:35:12,255 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:35:12,287 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:12,588 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-08-16 01:35:12,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:35:12,784 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-08-16 01:35:12,820 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-08-16 01:35:12,845 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-08-16 01:35:12,864 [ scc.config] DEBUG Found github.token 2026-08-16 01:35:12,864 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-08-16 01:35:12,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-16 01:35:12,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:12,915 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-08-16 01:35:13,369 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:35:13,529 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-08-16 01:35:13,529 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-08-16 01:35:13,529 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-08-16 01:35:13,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:35:13,714 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-16 01:35:13,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:13,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 196 (Storage options only if needed) eeaeaa9e3789fce6809def20cd9a43f37f61668f' 2026-08-16 01:35:14,187 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-08-16 01:35:14,271 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:35:14,370 [ scc.git] DEBUG .pre-commit-config.yaml | 2 +- 2026-08-16 01:35:14,370 [ scc.git] DEBUG src/omero_zarr/masks.py | 10 ++++++++++ 2026-08-16 01:35:14,370 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 6 ++---- 2026-08-16 01:35:14,370 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 3 ++- 2026-08-16 01:35:14,370 [ scc.git] DEBUG test/integration/clitest/test_export.py | 2 +- 2026-08-16 01:35:14,370 [ scc.git] DEBUG 5 files changed, 16 insertions(+), 7 deletions(-) 2026-08-16 01:35:14,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:35:14,567 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:35:14,686 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:35:14,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:14,702 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:35:14,814 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:35:14,888 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f0e2c10> has no local changes 2026-08-16 01:35:14,888 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:35:15,282 [ scc.git] DEBUG [detached HEAD 3ab471a] merge master -Dorg -Ssuccess-only 2026-08-16 01:35:15,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:35:15,284 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:35:15,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-08-16 01:35:16,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/700 HTTP/1.1" 200 None 2026-08-16 01:35:16,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/49ae9c9aa9514f87fbb0a2f5e03d5408e240036d?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:17,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/49ae9c9aa9514f87fbb0a2f5e03d5408e240036d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:35:17,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/49ae9c9aa9514f87fbb0a2f5e03d5408e240036d/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:35:18,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/49ae9c9aa9514f87fbb0a2f5e03d5408e240036d?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:18,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/49ae9c9aa9514f87fbb0a2f5e03d5408e240036d?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:35:18,819 [ scc.repo] DEBUG - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' 2026-08-16 01:35:19,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/692 HTTP/1.1" 200 None 2026-08-16 01:35:19,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:20,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:35:20,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:35:21,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/123f30064dc116c09098786206e54f8ec811c2c2?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:21,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/123f30064dc116c09098786206e54f8ec811c2c2?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:35:21,904 [ scc.repo] DEBUG - PR 692 will-moore 'colorbar lut background fix' 2026-08-16 01:35:22,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-08-16 01:35:23,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-08-16 01:35:23,323 [ scc.repo] DEBUG # ... Include label: include 2026-08-16 01:35:23,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:24,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:35:24,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:35:25,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-08-16 01:35:25,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:35:25,873 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-16 01:35:25,873 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:35:25,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-16 01:35:25,874 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:35:25,874 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:35:25,896 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:35:25,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:35:25,922 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:35:26,122 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:35:27,941 [ scc.git] ERROR stderr (git merge --ff-only origin/master): Updating files: 68% (56/82) Updating files: 69% (57/82) Updating files: 70% (58/82) Updating files: 71% (59/82) Updating files: 73% (60/82) Updating files: 74% (61/82) Updating 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https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/697 HTTP/1.1" 200 None 2026-08-16 01:35:31,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/695 HTTP/1.1" 200 None 2026-08-16 01:35:31,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/693 HTTP/1.1" 200 None 2026-08-16 01:35:32,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/691 HTTP/1.1" 200 None 2026-08-16 01:35:33,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/686 HTTP/1.1" 200 None 2026-08-16 01:35:34,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-08-16 01:35:34,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-08-16 01:35:35,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-08-16 01:35:36,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-08-16 01:35:37,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-08-16 01:35:38,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-08-16 01:35:38,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-08-16 01:35:39,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-08-16 01:35:40,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-08-16 01:35:41,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-08-16 01:35:42,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-08-16 01:35:42,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-08-16 01:35:43,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-08-16 01:35:44,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-08-16 01:35:45,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-08-16 01:35:46,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-08-16 01:35:46,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-08-16 01:35:47,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-08-16 01:35:48,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-08-16 01:35:49,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-08-16 01:35:50,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-08-16 01:35:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-08-16 01:35:51,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-08-16 01:35:52,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-08-16 01:35:53,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-08-16 01:35:54,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-08-16 01:35:55,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-08-16 01:35:56,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-08-16 01:35:57,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-08-16 01:35:58,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-08-16 01:35:59,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-08-16 01:35:59,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-08-16 01:36:00,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-08-16 01:36:01,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-08-16 01:36:02,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-08-16 01:36:03,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-08-16 01:36:03,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-08-16 01:36:04,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-08-16 01:36:05,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-08-16 01:36:06,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-08-16 01:36:07,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-08-16 01:36:08,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-08-16 01:36:09,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-08-16 01:36:10,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-08-16 01:36:10,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-08-16 01:36:11,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-08-16 01:36:12,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-08-16 01:36:12,457 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-08-16 01:36:13,217 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-16 01:36:13,217 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-08-16 01:36:13,252 [ scc.git] DEBUG Calling 'git fetch origin pull/692/head' 2026-08-16 01:36:13,809 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-16 01:36:13,809 [ scc.git] DEBUG * branch refs/pull/692/head -> FETCH_HEAD 2026-08-16 01:36:13,833 [ scc.git] DEBUG Calling 'git fetch origin pull/700/head' 2026-08-16 01:36:14,382 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-08-16 01:36:14,382 [ scc.git] DEBUG * branch refs/pull/700/head -> FETCH_HEAD 2026-08-16 01:36:14,408 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:36:14,408 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:14,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:14,421 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-16 01:36:14,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:14,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-08-16 01:36:14,968 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-08-16 01:36:14,968 [ scc.git] DEBUG Auto-merging src/index.html 2026-08-16 01:36:14,968 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-08-16 01:36:15,095 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:15,175 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-08-16 01:36:15,175 [ scc.git] DEBUG src/index.html | 11 ++ 2026-08-16 01:36:15,175 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-08-16 01:36:15,175 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-08-16 01:36:15,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:36:15,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-16 01:36:15,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:15,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 692 (colorbar lut background fix) 123f30064dc116c09098786206e54f8ec811c2c2' 2026-08-16 01:36:15,778 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:15,854 [ scc.git] DEBUG src/js/views/panel_view.js | 5 +++++ 2026-08-16 01:36:15,854 [ scc.git] DEBUG src/templates/colorbar.template.html | 2 +- 2026-08-16 01:36:15,854 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 1 deletion(-) 2026-08-16 01:36:16,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:36:16,033 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...49ae9c9aa9514f87fbb0a2f5e03d5408e240036d' 2026-08-16 01:36:16,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:16,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 700 (Fix parentheses in zoom level for loop for export script) 49ae9c9aa9514f87fbb0a2f5e03d5408e240036d' 2026-08-16 01:36:16,469 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-08-16 01:36:16,586 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:16,668 [ scc.git] DEBUG omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py | 4 ++-- 2026-08-16 01:36:16,668 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-08-16 01:36:16,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:36:16,851 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:36:16,973 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:16,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:16,987 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:36:17,100 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:36:17,208 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424ef35050> has no local changes 2026-08-16 01:36:17,208 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..5124b647 Previously merged: - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:36:17,364 [ scc.git] DEBUG [detached HEAD e560a08d] merge master -Dorg -Ssuccess-only 2026-08-16 01:36:17,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:36:17,366 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:36:17,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-08-16 01:36:18,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-08-16 01:36:18,189 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:18,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:19,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:19,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:36:20,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:20,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:20,801 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:36:21,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-08-16 01:36:21,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-08-16 01:36:22,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:22,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:23,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:23,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:23,907 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-08-16 01:36:23,907 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:36:23,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-16 01:36:23,908 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:23,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:23,931 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:36:23,952 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:36:23,952 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:36:23,975 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:36:24,032 [ scc.git] DEBUG Already up to date. 2026-08-16 01:36:24,033 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-08-16 01:36:24,543 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-16 01:36:24,543 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-08-16 01:36:24,563 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-08-16 01:36:25,025 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-08-16 01:36:25,025 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-08-16 01:36:25,048 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:36:25,048 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:25,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:25,062 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-16 01:36:25,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:25,099 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-08-16 01:36:25,255 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-08-16 01:36:25,389 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:25,456 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-08-16 01:36:25,456 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-08-16 01:36:25,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:36:25,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-16 01:36:25,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:25,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-08-16 01:36:25,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:26,017 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:36:26,017 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:36:26,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:36:26,192 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:36:26,309 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:26,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:26,323 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:36:26,417 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:36:26,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f35e490> has no local changes 2026-08-16 01:36:26,477 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:36:26,701 [ scc.git] DEBUG [detached HEAD 0d202e6] merge master -Dorg -Ssuccess-only 2026-08-16 01:36:26,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:36:26,711 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:36:27,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-08-16 01:36:27,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-08-16 01:36:28,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-08-16 01:36:28,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-08-16 01:36:28,552 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:29,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:29,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:38,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:38,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:38,540 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-16 01:36:39,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-08-16 01:36:39,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-08-16 01:36:40,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-08-16 01:36:40,058 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:40,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:41,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:41,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:42,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:42,319 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-16 01:36:42,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-08-16 01:36:42,816 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:43,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:43,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:44,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:44,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:44,875 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-16 01:36:45,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-08-16 01:36:45,531 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:46,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:46,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:47,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:47,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:47,697 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-16 01:36:48,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-08-16 01:36:48,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-08-16 01:36:48,688 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:49,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:49,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:50,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:50,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:50,834 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-16 01:36:51,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-08-16 01:36:51,338 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:51,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:52,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:52,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:53,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:53,520 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-16 01:36:54,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-08-16 01:36:54,033 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:36:54,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:55,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:36:55,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-08-16 01:36:56,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:36:56,207 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-16 01:36:56,207 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:36:56,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-16 01:36:56,209 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:56,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:56,231 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:36:56,252 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:36:56,252 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:36:56,274 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:36:56,329 [ scc.git] DEBUG Already up to date. 2026-08-16 01:36:56,329 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-08-16 01:36:56,799 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:56,799 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-08-16 01:36:56,827 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-08-16 01:36:57,270 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:57,270 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-08-16 01:36:57,293 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-08-16 01:36:57,747 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:57,747 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-08-16 01:36:57,782 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-08-16 01:36:58,222 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:58,222 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-08-16 01:36:58,249 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-08-16 01:36:58,687 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:58,687 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-08-16 01:36:58,715 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-08-16 01:36:59,144 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:59,144 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-08-16 01:36:59,166 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-08-16 01:36:59,606 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-08-16 01:36:59,606 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-08-16 01:36:59,628 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:36:59,628 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:36:59,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:59,643 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-16 01:36:59,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:36:59,681 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-08-16 01:36:59,895 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:36:59,971 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-08-16 01:36:59,971 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-08-16 01:37:00,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:00,155 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-16 01:37:00,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:00,193 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-08-16 01:37:00,348 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:00,423 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:00,496 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-08-16 01:37:00,496 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-08-16 01:37:00,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:00,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-16 01:37:00,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:00,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-16 01:37:00,941 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:00,941 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-16 01:37:00,966 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:37:00,967 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:37:00,994 [ scc.git] DEBUG Calling 'git reset --hard 67920d5fa72a89ea487e7c5b3806995eca499e47' 2026-08-16 01:37:01,124 [ scc.git] DEBUG HEAD is now at 67920d5 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-08-16 01:37:01,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:01,309 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-08-16 01:37:01,333 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-16 01:37:01,349 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-08-16 01:37:01,360 [ scc.config] DEBUG Found github.token 2026-08-16 01:37:01,360 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-08-16 01:37:01,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-16 01:37:01,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:01,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-08-16 01:37:01,562 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:01,625 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:01,684 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-08-16 01:37:01,684 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-08-16 01:37:01,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:01,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-16 01:37:01,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:01,939 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-08-16 01:37:02,101 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:02,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:02,298 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-08-16 01:37:02,298 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-08-16 01:37:02,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:02,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-16 01:37:02,526 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:02,539 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-16 01:37:02,701 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:02,701 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-16 01:37:02,720 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:37:02,722 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:37:02,751 [ scc.git] DEBUG Calling 'git reset --hard 5bc9f05bbdd6427a3edf559cad3b521e4c7924c1' 2026-08-16 01:37:02,920 [ scc.git] DEBUG HEAD is now at 5bc9f05 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-16 01:37:03,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:03,106 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-08-16 01:37:03,126 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-16 01:37:03,141 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-08-16 01:37:03,151 [ scc.config] DEBUG Found github.token 2026-08-16 01:37:03,151 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-08-16 01:37:03,151 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-16 01:37:03,171 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:03,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-16 01:37:03,340 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:03,340 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-16 01:37:03,360 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:37:03,361 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:37:03,388 [ scc.git] DEBUG Calling 'git reset --hard 5bc9f05bbdd6427a3edf559cad3b521e4c7924c1' 2026-08-16 01:37:03,570 [ scc.git] DEBUG HEAD is now at 5bc9f05 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-08-16 01:37:03,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:03,750 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-08-16 01:37:03,770 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-08-16 01:37:03,788 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-08-16 01:37:03,799 [ scc.config] DEBUG Found github.token 2026-08-16 01:37:03,799 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-08-16 01:37:03,799 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:37:03,904 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:37:03,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:03,916 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:37:04,006 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:37:04,079 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1a3690> has no local changes 2026-08-16 01:37:04,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:37:04,206 [ scc.git] DEBUG [detached HEAD 4d6a4e1] merge master -Dorg -Ssuccess-only 2026-08-16 01:37:04,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:37:04,207 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:37:04,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-08-16 01:37:05,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/563 HTTP/1.1" 200 None 2026-08-16 01:37:05,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:06,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:37:06,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:37:07,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:07,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/9f68a0cd8a6c663a360aa9433918b5d25aeab3ee?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:37:07,702 [ scc.repo] DEBUG - PR 563 will-moore 'Use POST data for imgRdef save' 2026-08-16 01:37:08,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/562 HTTP/1.1" 200 None 2026-08-16 01:37:08,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:09,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:37:09,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:37:10,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:10,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/901bd0be162b3d830247d9d70eb8efa6a76fa7b9?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:37:10,800 [ scc.repo] DEBUG - PR 562 will-moore 'Keyboard select roi' 2026-08-16 01:37:11,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-08-16 01:37:11,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532/comments HTTP/1.1" 200 None 2026-08-16 01:37:12,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:12,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:37:13,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:37:13,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:14,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/fb88f3a09446141b1d1bc276c87ea6a832ff1b3a?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:37:14,366 [ scc.repo] DEBUG - PR 532 will-moore 'Zarr layers' 2026-08-16 01:37:14,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-08-16 01:37:15,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-08-16 01:37:15,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:16,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:37:16,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-08-16 01:37:17,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:37:17,419 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-16 01:37:17,419 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:37:17,419 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-16 01:37:17,421 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:37:17,421 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:17,452 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:37:17,473 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:37:17,473 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:37:17,541 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:37:18,292 [ scc.git] DEBUG Updating 7a798cee..3af5a346 2026-08-16 01:37:18,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/559 HTTP/1.1" 200 None 2026-08-16 01:37:19,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/558 HTTP/1.1" 200 None 2026-08-16 01:37:20,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/557 HTTP/1.1" 200 None 2026-08-16 01:37:21,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/541 HTTP/1.1" 200 None 2026-08-16 01:37:21,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/556 HTTP/1.1" 200 None 2026-08-16 01:37:22,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/554 HTTP/1.1" 200 None 2026-08-16 01:37:23,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/553 HTTP/1.1" 200 None 2026-08-16 01:37:24,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/552 HTTP/1.1" 200 None 2026-08-16 01:37:24,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/551 HTTP/1.1" 200 None 2026-08-16 01:37:25,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/550 HTTP/1.1" 200 None 2026-08-16 01:37:26,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/549 HTTP/1.1" 200 None 2026-08-16 01:37:27,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/548 HTTP/1.1" 200 None 2026-08-16 01:37:27,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/547 HTTP/1.1" 200 None 2026-08-16 01:37:28,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/540 HTTP/1.1" 200 None 2026-08-16 01:37:29,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/539 HTTP/1.1" 200 None 2026-08-16 01:37:30,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/537 HTTP/1.1" 200 None 2026-08-16 01:37:30,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/535 HTTP/1.1" 200 None 2026-08-16 01:37:31,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/527 HTTP/1.1" 200 None 2026-08-16 01:37:32,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/534 HTTP/1.1" 200 None 2026-08-16 01:37:33,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-08-16 01:37:34,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-08-16 01:37:35,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-08-16 01:37:35,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-08-16 01:37:36,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-08-16 01:37:37,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-08-16 01:37:38,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-08-16 01:37:38,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-08-16 01:37:39,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-08-16 01:37:40,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-08-16 01:37:41,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-08-16 01:37:42,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-08-16 01:37:42,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-08-16 01:37:43,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-08-16 01:37:44,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-08-16 01:37:45,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-08-16 01:37:46,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-08-16 01:37:47,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-08-16 01:37:51,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-08-16 01:37:51,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-08-16 01:37:52,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-08-16 01:37:52,718 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-08-16 01:37:53,393 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-16 01:37:53,393 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-08-16 01:37:53,420 [ scc.git] DEBUG Calling 'git fetch origin pull/532/head' 2026-08-16 01:37:53,934 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-16 01:37:53,934 [ scc.git] DEBUG * branch refs/pull/532/head -> FETCH_HEAD 2026-08-16 01:37:53,960 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2026-08-16 01:37:54,591 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-16 01:37:54,592 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2026-08-16 01:37:54,617 [ scc.git] DEBUG Calling 'git fetch origin pull/563/head' 2026-08-16 01:37:55,189 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-08-16 01:37:55,189 [ scc.git] DEBUG * branch refs/pull/563/head -> FETCH_HEAD 2026-08-16 01:37:55,215 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:37:55,215 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:37:55,215 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:55,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-16 01:37:55,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:55,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-08-16 01:37:55,705 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-08-16 01:37:55,837 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:55,910 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-08-16 01:37:55,910 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-08-16 01:37:55,910 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-08-16 01:37:56,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:56,132 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-16 01:37:56,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:56,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 532 (Zarr layers) fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging css/app.css 2026-08-16 01:37:57,316 [ scc.git] DEBUG CONFLICT (content): Merge conflict in css/app.css 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:37:57,316 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging package.json 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging src/model/image_config.js 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging src/viewers/viewer/source/Image.js 2026-08-16 01:37:57,316 [ scc.git] DEBUG Auto-merging webpack.dev.config.js 2026-08-16 01:37:57,342 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:37:57,346 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:37:57,432 [ scc.git] DEBUG Calling 'git reset --hard 944d96c7f8a6349b98eff439e1a588dc82aacbbf' 2026-08-16 01:37:57,865 [ scc.git] DEBUG HEAD is now at 944d96c7 merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 2026-08-16 01:37:58,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:58,060 [ scc.git] DEBUG Calling 'git merge-base 3af5a3461d5bbae51d9026388abf0139a32474ea fb88f3a09446141b1d1bc276c87ea6a832ff1b3a' 2026-08-16 01:37:58,103 [ scc.git] DEBUG Calling 'git diff --name-only 0b7eaf71f7e3f5c7289fab4bf857094bdadce1e4..3af5a3461d5bbae51d9026388abf0139a32474ea' 2026-08-16 01:37:58,148 [ scc.git] INFO - PR 532 will-moore 'Zarr layers' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - package-lock.json - css/app.css --conflicts 2026-08-16 01:37:58,158 [ scc.config] DEBUG Found github.token 2026-08-16 01:37:58,158 [ scc.git] DEBUG Not adding comment to issue #532, already --conflicts. 2026-08-16 01:37:58,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...901bd0be162b3d830247d9d70eb8efa6a76fa7b9' 2026-08-16 01:37:58,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:58,234 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Keyboard select roi) 901bd0be162b3d830247d9d70eb8efa6a76fa7b9' 2026-08-16 01:37:58,654 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:58,739 [ scc.git] DEBUG src/app/context.js | 22 ++++++++++----------- 2026-08-16 01:37:58,739 [ scc.git] DEBUG src/regions/regions-edit.js | 48 ++++++++++++++++++++++++++++++++++++++++++++- 2026-08-16 01:37:58,739 [ scc.git] DEBUG src/utils/ui.js | 13 +++++++++--- 2026-08-16 01:37:58,739 [ scc.git] DEBUG 3 files changed, 68 insertions(+), 15 deletions(-) 2026-08-16 01:37:58,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:58,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9f68a0cd8a6c663a360aa9433918b5d25aeab3ee' 2026-08-16 01:37:59,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:59,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 563 (Use POST data for imgRdef save) 9f68a0cd8a6c663a360aa9433918b5d25aeab3ee' 2026-08-16 01:37:59,346 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:37:59,417 [ scc.git] DEBUG plugin/setup.py | 2 +- 2026-08-16 01:37:59,417 [ scc.git] DEBUG src/model/image_config.js | 7 ++++--- 2026-08-16 01:37:59,417 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 4 deletions(-) 2026-08-16 01:37:59,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:37:59,616 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:37:59,725 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:37:59,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:37:59,737 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:37:59,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:37:59,931 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424ef53510> has no local changes 2026-08-16 01:37:59,931 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..3af5a346 Previously merged: - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:00,165 [ scc.git] DEBUG [detached HEAD 18c7d7c9] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:00,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:00,168 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:00,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-08-16 01:38:00,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-08-16 01:38:01,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-08-16 01:38:01,488 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:38:02,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:02,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:03,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:38:03,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:04,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:04,569 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:38:05,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-08-16 01:38:05,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:06,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:06,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:07,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:07,012 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:38:07,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-08-16 01:38:08,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-08-16 01:38:08,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:09,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:09,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:10,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:10,058 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-08-16 01:38:10,059 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:38:10,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-16 01:38:10,060 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:10,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:10,082 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:38:10,105 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:38:10,105 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:38:10,127 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:38:10,188 [ scc.git] DEBUG Already up to date. 2026-08-16 01:38:10,188 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-16 01:38:10,661 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-16 01:38:10,661 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-16 01:38:10,692 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-08-16 01:38:11,194 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-16 01:38:11,195 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-08-16 01:38:11,217 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-08-16 01:38:11,655 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-08-16 01:38:11,655 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-08-16 01:38:11,675 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:38:11,675 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:11,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:11,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-16 01:38:11,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:11,729 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-08-16 01:38:12,047 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:12,117 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-08-16 01:38:12,117 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-08-16 01:38:12,117 [ scc.git] DEBUG requirements.txt | 2 +- 2026-08-16 01:38:12,117 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-08-16 01:38:12,117 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-08-16 01:38:12,117 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-08-16 01:38:12,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:12,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-16 01:38:12,347 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:12,361 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-08-16 01:38:12,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:12,665 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:38:12,665 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:38:12,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:12,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-16 01:38:12,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:12,928 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-16 01:38:13,138 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-08-16 01:38:13,138 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-08-16 01:38:13,196 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:38:13,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:38:13,225 [ scc.git] DEBUG Calling 'git reset --hard 11f6ead6f54e7882a04e8f7051722f9e34301509' 2026-08-16 01:38:13,385 [ scc.git] DEBUG HEAD is now at 11f6ead merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-08-16 01:38:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:13,570 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-08-16 01:38:13,596 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-08-16 01:38:13,616 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-08-16 01:38:13,627 [ scc.config] DEBUG Found github.token 2026-08-16 01:38:13,627 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-08-16 01:38:13,627 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:38:13,739 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:13,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:13,752 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:38:13,850 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:38:13,912 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1a31d0> has no local changes 2026-08-16 01:38:13,912 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:14,046 [ scc.git] DEBUG [detached HEAD 128f186] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:14,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:14,048 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:14,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-08-16 01:38:14,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-08-16 01:38:15,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-08-16 01:38:16,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:16,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:17,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:17,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:17,515 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-16 01:38:18,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-08-16 01:38:18,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-08-16 01:38:19,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:19,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:20,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:20,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:20,569 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-16 01:38:21,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-08-16 01:38:21,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-08-16 01:38:22,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:22,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:23,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:23,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:23,494 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-16 01:38:23,494 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:38:23,494 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-16 01:38:23,495 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:23,495 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:23,519 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:38:23,542 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:38:23,542 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:38:23,584 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:38:23,886 [ scc.git] DEBUG Updating 3cd120c..6a653e4 2026-08-16 01:38:24,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/95 HTTP/1.1" 200 None 2026-08-16 01:38:25,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/94 HTTP/1.1" 200 None 2026-08-16 01:38:25,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-08-16 01:38:25,987 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-08-16 01:38:26,655 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-16 01:38:26,655 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-08-16 01:38:26,680 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-08-16 01:38:27,446 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-16 01:38:27,446 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-08-16 01:38:27,468 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-08-16 01:38:27,956 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-08-16 01:38:27,956 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-08-16 01:38:27,984 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:38:27,984 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:27,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:28,000 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-16 01:38:28,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:28,076 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-16 01:38:28,397 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-08-16 01:38:28,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-08-16 01:38:28,397 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-16 01:38:28,397 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-16 01:38:28,441 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:38:28,442 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:38:28,468 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-16 01:38:28,623 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-08-16 01:38:28,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:28,831 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-08-16 01:38:28,885 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-16 01:38:28,915 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-08-16 01:38:28,927 [ scc.config] DEBUG Found github.token 2026-08-16 01:38:28,927 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-08-16 01:38:28,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-16 01:38:28,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:29,013 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-16 01:38:29,322 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-08-16 01:38:29,322 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-08-16 01:38:29,322 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-08-16 01:38:29,348 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:38:29,349 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:38:29,377 [ scc.git] DEBUG Calling 'git reset --hard 6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-16 01:38:29,514 [ scc.git] DEBUG HEAD is now at 6a653e4 Fix workflow permission indentation 2026-08-16 01:38:29,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:29,692 [ scc.git] DEBUG Calling 'git merge-base 6a653e49e3589ccb463166506896639f6f0a5a2b 78e55539b68e351ed5ef202854718b49a37729a7' 2026-08-16 01:38:29,743 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..6a653e49e3589ccb463166506896639f6f0a5a2b' 2026-08-16 01:38:29,767 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-08-16 01:38:29,778 [ scc.config] DEBUG Found github.token 2026-08-16 01:38:29,778 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-08-16 01:38:29,778 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-16 01:38:29,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:29,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-08-16 01:38:30,080 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:30,148 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-08-16 01:38:30,148 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-08-16 01:38:30,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:30,358 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:38:30,469 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:30,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:30,481 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:38:30,586 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:38:30,636 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1d8390> has no local changes 2026-08-16 01:38:30,636 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:30,773 [ scc.git] DEBUG [detached HEAD 83eb854] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:30,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:30,775 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:31,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-08-16 01:38:31,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-08-16 01:38:32,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:32,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:33,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:33,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:33,661 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:38:34,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-08-16 01:38:34,176 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:38:34,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:35,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:35,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:36,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:36,208 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-16 01:38:36,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-08-16 01:38:36,708 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:38:37,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:37,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:38,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:38,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:38,790 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-16 01:38:39,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-08-16 01:38:39,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-08-16 01:38:40,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-08-16 01:38:40,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-08-16 01:38:41,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-08-16 01:38:41,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-08-16 01:38:42,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-08-16 01:38:42,279 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:38:42,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-16 01:38:42,280 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:42,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:42,306 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:38:42,328 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:38:42,328 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:38:42,356 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:38:42,415 [ scc.git] DEBUG Already up to date. 2026-08-16 01:38:42,415 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-08-16 01:38:42,870 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-16 01:38:42,870 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-08-16 01:38:42,896 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-08-16 01:38:43,339 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-16 01:38:43,340 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-08-16 01:38:43,367 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-08-16 01:38:43,836 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-08-16 01:38:43,837 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-08-16 01:38:43,858 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:38:43,858 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:43,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:43,871 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-16 01:38:43,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:43,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-08-16 01:38:44,131 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:44,223 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-08-16 01:38:44,223 [ scc.git] DEBUG package.json | 2 +- 2026-08-16 01:38:44,223 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-08-16 01:38:44,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:44,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-08-16 01:38:44,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:44,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-08-16 01:38:44,601 [ scc.git] DEBUG Auto-merging package-lock.json 2026-08-16 01:38:44,601 [ scc.git] DEBUG Auto-merging package.json 2026-08-16 01:38:44,668 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:44,736 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-08-16 01:38:44,736 [ scc.git] DEBUG package.json | 2 +- 2026-08-16 01:38:44,736 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-08-16 01:38:44,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:44,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-16 01:38:44,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:44,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-08-16 01:38:45,242 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:45,306 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:38:45,306 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:38:45,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:45,502 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:38:45,618 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:45,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:45,632 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:38:45,740 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:38:45,807 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424ef680d0> has no local changes 2026-08-16 01:38:45,807 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:46,016 [ scc.git] DEBUG [detached HEAD 763c8fd] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:46,017 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:46,017 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:46,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-08-16 01:38:46,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-08-16 01:38:46,809 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:38:47,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:47,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:48,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:38:48,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:49,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:49,390 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:38:49,390 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:38:49,390 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-16 01:38:49,391 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:49,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:49,411 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:38:49,431 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:38:49,431 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:38:49,452 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:38:49,507 [ scc.git] DEBUG Already up to date. 2026-08-16 01:38:49,507 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-08-16 01:38:49,965 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-08-16 01:38:49,965 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-08-16 01:38:49,987 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:38:49,987 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:49,988 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:50,001 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-16 01:38:50,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:50,038 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-08-16 01:38:50,212 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:38:50,285 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:38:50,285 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:38:50,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:38:50,466 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:38:50,574 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:50,574 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:50,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:38:50,680 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:38:50,731 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424ef8d9d0> has no local changes 2026-08-16 01:38:50,731 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:50,871 [ scc.git] DEBUG [detached HEAD 5a7a63c] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:50,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:50,873 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:51,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-08-16 01:38:51,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-08-16 01:38:51,684 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:38:51,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-16 01:38:51,685 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:51,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:51,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:38:51,722 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:38:51,722 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:38:51,757 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:38:51,997 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-08-16 01:38:52,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-08-16 01:38:53,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-08-16 01:38:53,515 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:38:53,515 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:53,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:53,530 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:38:53,635 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:38:53,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:38:53,648 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:38:53,743 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:38:53,803 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f0c3390> has no local changes 2026-08-16 01:38:53,803 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:38:53,944 [ scc.git] DEBUG [detached HEAD 81ab70f] merge master -Dorg -Ssuccess-only 2026-08-16 01:38:53,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:38:53,946 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:38:54,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-08-16 01:38:54,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-08-16 01:38:54,812 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:38:55,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:55,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:38:56,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:38:56,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-08-16 01:38:57,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:38:57,445 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:38:57,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-08-16 01:38:58,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-08-16 01:39:03,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:04,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:04,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:05,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:05,347 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-16 01:39:05,347 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:05,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-16 01:39:05,348 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:05,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:05,367 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:05,387 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:05,387 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:05,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:05,465 [ scc.git] DEBUG Already up to date. 2026-08-16 01:39:05,465 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-16 01:39:06,190 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-16 01:39:06,190 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-16 01:39:06,216 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-16 01:39:06,657 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-08-16 01:39:06,657 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-16 01:39:06,683 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:06,683 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:06,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:06,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-16 01:39:06,727 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:06,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-16 01:39:07,091 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG Auto-merging setup.py 2026-08-16 01:39:07,091 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-08-16 01:39:07,125 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:39:07,126 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:39:07,164 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-16 01:39:07,393 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-08-16 01:39:07,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:07,593 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-08-16 01:39:07,626 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-08-16 01:39:07,649 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py - setup.py --conflicts 2026-08-16 01:39:07,661 [ scc.config] DEBUG Found github.token 2026-08-16 01:39:07,661 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-08-16 01:39:07,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-16 01:39:07,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:07,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-08-16 01:39:07,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:08,060 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:39:08,060 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:39:08,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:08,253 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:08,358 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:08,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:08,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:08,472 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:08,531 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1b4910> has no local changes 2026-08-16 01:39:08,531 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:08,755 [ scc.git] DEBUG [detached HEAD 19db3c1] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:08,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:08,758 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:09,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-08-16 01:39:09,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-08-16 01:39:10,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-08-16 01:39:10,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-08-16 01:39:11,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:11,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:12,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:12,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:12,561 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-16 01:39:12,561 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:12,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-16 01:39:12,562 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:12,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:12,582 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:12,599 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:12,599 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:12,618 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:12,772 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-08-16 01:39:13,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-08-16 01:39:14,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-08-16 01:39:14,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-08-16 01:39:14,978 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-08-16 01:39:15,550 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-08-16 01:39:15,550 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-08-16 01:39:15,574 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:15,575 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:15,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:15,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-08-16 01:39:15,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:15,628 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-08-16 01:39:15,792 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-08-16 01:39:15,867 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:15,931 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-08-16 01:39:15,931 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-08-16 01:39:15,931 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-08-16 01:39:15,931 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-08-16 01:39:15,931 [ scc.git] DEBUG ms/test | 2 ++ 2026-08-16 01:39:15,931 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-08-16 01:39:15,931 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-08-16 01:39:15,931 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-08-16 01:39:15,931 [ scc.git] DEBUG create mode 100755 ms/test 2026-08-16 01:39:16,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:16,123 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:16,226 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:16,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:16,239 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:16,327 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:16,401 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c5d7290> has no local changes 2026-08-16 01:39:16,401 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:16,541 [ scc.git] DEBUG [detached HEAD 5d77229] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:16,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:16,542 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:16,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-08-16 01:39:17,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-08-16 01:39:17,374 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:39:17,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:18,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:18,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:19,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:19,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:19,939 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:39:19,939 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:19,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-16 01:39:19,940 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:19,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:19,961 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:19,978 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:19,978 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:19,997 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:20,046 [ scc.git] DEBUG Already up to date. 2026-08-16 01:39:20,046 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-08-16 01:39:20,503 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-08-16 01:39:20,503 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-08-16 01:39:20,525 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:20,525 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:20,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:20,539 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-16 01:39:20,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:20,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-08-16 01:39:20,758 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:20,830 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:39:20,830 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:39:21,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:21,019 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:21,130 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:21,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:21,143 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:21,239 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:21,285 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c5e0150> has no local changes 2026-08-16 01:39:21,285 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:21,394 [ scc.git] DEBUG [detached HEAD 85fc910] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:21,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:21,396 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-08-16 01:39:22,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-08-16 01:39:22,377 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:39:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:23,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:24,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:24,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:24,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:24,985 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:39:24,986 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:24,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-16 01:39:24,987 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:24,987 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:25,010 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:25,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:25,028 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:25,049 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:25,204 [ scc.git] DEBUG Updating deab817..160d894 2026-08-16 01:39:25,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-08-16 01:39:25,842 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-08-16 01:39:26,286 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-08-16 01:39:26,286 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-08-16 01:39:26,309 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:26,309 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:26,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:26,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-16 01:39:26,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:26,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-08-16 01:39:26,524 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:26,596 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:39:26,596 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:39:26,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:26,780 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:26,886 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:26,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:26,897 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:26,999 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:27,044 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c5c9450> has no local changes 2026-08-16 01:39:27,044 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:27,180 [ scc.git] DEBUG [detached HEAD b577afe] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:27,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:27,182 [ scc.git] INFO Overriding base-branch from master to main 2026-08-16 01:39:27,182 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:27,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-08-16 01:39:27,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-08-16 01:39:28,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-08-16 01:39:29,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:29,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:30,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:30,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:31,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:31,079 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-08-16 01:39:31,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-08-16 01:39:32,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-08-16 01:39:32,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-08-16 01:39:33,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:33,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:34,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:34,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:34,667 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-16 01:39:34,667 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:34,667 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-16 01:39:34,668 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:34,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:34,685 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-08-16 01:39:34,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:34,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-08-16 01:39:34,716 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-08-16 01:39:34,867 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-08-16 01:39:35,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-08-16 01:39:36,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-08-16 01:39:36,310 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-08-16 01:39:36,849 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-16 01:39:36,849 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-08-16 01:39:36,868 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-08-16 01:39:37,545 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-08-16 01:39:37,545 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-08-16 01:39:37,566 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:37,566 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:37,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:37,577 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-16 01:39:37,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:37,613 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-16 01:39:37,792 [ scc.git] DEBUG Auto-merging README.rst 2026-08-16 01:39:37,792 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-08-16 01:39:37,792 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-08-16 01:39:37,792 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-16 01:39:37,812 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-08-16 01:39:37,813 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-08-16 01:39:37,839 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-16 01:39:37,964 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-08-16 01:39:38,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:38,168 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-08-16 01:39:38,192 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-08-16 01:39:38,209 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#43](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-08-16 01:39:38,218 [ scc.config] DEBUG Found github.token 2026-08-16 01:39:38,218 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-08-16 01:39:38,218 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-16 01:39:38,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:38,260 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-08-16 01:39:38,439 [ scc.git] DEBUG Auto-merging README.rst 2026-08-16 01:39:38,439 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-08-16 01:39:38,579 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:38,654 [ scc.git] DEBUG README.rst | 3 + 2026-08-16 01:39:38,654 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-08-16 01:39:38,654 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-08-16 01:39:38,654 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-08-16 01:39:38,654 [ scc.git] DEBUG setup.py | 5 +- 2026-08-16 01:39:38,654 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-08-16 01:39:38,654 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-08-16 01:39:38,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:38,847 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:38,945 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:38,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:38,958 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:39,051 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:39,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c602a50> has no local changes 2026-08-16 01:39:39,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:39,269 [ scc.git] DEBUG [detached HEAD 940854b] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:39,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:39,270 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:39,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-08-16 01:39:40,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-08-16 01:39:40,241 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:39:40,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:41,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:42,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:42,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:42,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:42,989 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:39:42,989 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:42,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-16 01:39:42,990 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:42,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:43,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:43,033 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:43,033 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:43,057 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:43,127 [ scc.git] DEBUG Already up to date. 2026-08-16 01:39:43,127 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-08-16 01:39:43,576 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-08-16 01:39:43,576 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-08-16 01:39:43,601 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:43,601 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:43,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:43,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-16 01:39:43,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:43,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-08-16 01:39:43,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:43,901 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:39:43,902 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:39:44,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:44,084 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:44,191 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:44,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:44,204 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:44,299 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:44,352 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f1b7dd0> has no local changes 2026-08-16 01:39:44,352 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:44,471 [ scc.git] DEBUG [detached HEAD 563a1e1] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:44,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:44,473 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:44,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-08-16 01:39:45,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-08-16 01:39:45,279 [ scc.repo] DEBUG # ... Include label: dependencies 2026-08-16 01:39:45,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:46,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:46,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:47,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:47,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:47,963 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:39:47,963 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:47,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-16 01:39:47,964 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:47,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:47,981 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:48,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:48,028 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:48,064 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:48,105 [ scc.git] DEBUG Already up to date. 2026-08-16 01:39:48,105 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-08-16 01:39:48,578 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-08-16 01:39:48,578 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-08-16 01:39:48,601 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:48,601 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:48,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:48,611 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-16 01:39:48,626 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:48,637 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-08-16 01:39:48,816 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:39:48,873 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-08-16 01:39:48,873 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-08-16 01:39:49,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:39:49,056 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:49,156 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:49,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:49,168 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:49,257 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:49,314 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c601490> has no local changes 2026-08-16 01:39:49,315 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:49,504 [ scc.git] DEBUG [detached HEAD eb2cae0] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:49,506 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:49,506 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:49,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-08-16 01:39:49,738 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:49,738 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-16 01:39:49,739 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:49,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:49,757 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-08-16 01:39:49,773 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:49,773 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-08-16 01:39:49,792 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-08-16 01:39:49,840 [ scc.git] DEBUG Already up to date. 2026-08-16 01:39:49,840 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:49,840 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:49,840 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:49,855 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:39:49,954 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:49,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:49,966 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:39:50,056 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:39:50,141 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f065e10> has no local changes 2026-08-16 01:39:50,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:39:50,301 [ scc.git] DEBUG [detached HEAD 5641e13] merge master -Dorg -Ssuccess-only 2026-08-16 01:39:50,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:39:50,302 [ scc.git] INFO Overriding base-branch from master to develop 2026-08-16 01:39:50,302 [ scc.repo] DEBUG ## PRs found: 2026-08-16 01:39:50,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-08-16 01:39:51,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None 2026-08-16 01:39:51,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:52,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-08-16 01:39:52,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-08-16 01:39:52,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None 2026-08-16 01:39:53,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2 2026-08-16 01:39:53,459 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-16 01:39:53,459 [ scc.repo] DEBUG ## Branches found: 2026-08-16 01:39:53,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-16 01:39:53,460 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:53,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:53,476 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-08-16 01:39:53,491 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-08-16 01:39:53,491 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-08-16 01:39:53,539 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-08-16 01:39:53,785 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-08-16 01:39:54,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-08-16 01:39:55,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-08-16 01:39:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-08-16 01:39:56,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-08-16 01:39:57,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-08-16 01:39:58,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-08-16 01:39:59,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-08-16 01:39:59,034 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head' 2026-08-16 01:39:59,641 [ scc.git] DEBUG From https://github.com/ome/scripts 2026-08-16 01:39:59,641 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD 2026-08-16 01:39:59,665 [ scc.git] DEBUG ## Unique users: [] 2026-08-16 01:39:59,665 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:39:59,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:59,700 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f' 2026-08-16 01:39:59,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:39:59,741 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f' 2026-08-16 01:39:59,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-08-16 01:40:00,046 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++-- 2026-08-16 01:40:00,046 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2026-08-16 01:40:00,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:00,244 [ scc.git] DEBUG Calling 'git submodule update' 2026-08-16 01:40:00,339 [ scc.git] DEBUG Get sha1 of %s 2026-08-16 01:40:00,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-08-16 01:40:00,350 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:40:00,441 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:40:00,493 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424c5de410> has no local changes 2026-08-16 01:40:00,493 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:40:00,626 [ scc.git] DEBUG [detached HEAD 4cc6626] merge master -Dorg -Ssuccess-only 2026-08-16 01:40:00,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:00,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-08-16 01:40:00,824 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-08-16 01:40:01,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:01,042 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-08-16 01:40:01,048 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-08-16 01:40:01,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:01,482 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-08-16 01:40:01,488 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-08-16 01:40:01,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:01,945 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-08-16 01:40:01,952 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-08-16 01:40:02,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:02,392 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-08-16 01:40:02,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:02,839 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-08-16 01:40:02,845 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-08-16 01:40:03,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:03,271 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-08-16 01:40:03,279 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-08-16 01:40:03,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:03,704 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-08-16 01:40:03,712 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-08-16 01:40:04,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:04,184 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-08-16 01:40:04,190 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-08-16 01:40:04,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:04,599 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-08-16 01:40:04,606 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-08-16 01:40:05,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:05,032 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-08-16 01:40:05,040 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-08-16 01:40:05,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:05,471 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-08-16 01:40:05,478 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-08-16 01:40:05,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:05,915 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-08-16 01:40:05,923 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-08-16 01:40:06,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:06,362 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-08-16 01:40:06,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:06,794 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-08-16 01:40:07,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:07,228 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-08-16 01:40:07,236 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-08-16 01:40:07,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:07,671 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-08-16 01:40:08,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:08,101 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-08-16 01:40:08,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:08,545 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-08-16 01:40:08,553 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-08-16 01:40:08,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:08,992 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-08-16 01:40:08,999 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-08-16 01:40:09,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:09,434 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-08-16 01:40:09,442 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-08-16 01:40:09,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:09,878 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-08-16 01:40:09,886 [ scc.config] DEBUG Found submodule.scripts.url 2026-08-16 01:40:10,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-08-16 01:40:10,313 [ scc.config] DEBUG Found submodule.scripts.branch 2026-08-16 01:40:10,313 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-08-16 01:40:12,294 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f424f0655d0> has local changes 2026-08-16 01:40:12,295 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' - PR 196 will-moore 'Storage options only if needed' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..5124b647 Previously merged: - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' - PR 691 dependabot[bot] 'Bump esbuild and vite' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 692 will-moore 'colorbar lut background fix' - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798cee..3af5a346 Previously merged: - PR 559 dependabot[bot] 'Bump js-yaml and mocha' - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' - PR 541 will-moore 'Only add channel to tile request string if active' - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' - PR 535 dependabot[bot] 'Bump tmp and eslint' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 471 will-moore 'Z projection disabled tooltip' - PR 562 will-moore 'Keyboard select roi' - PR 563 will-moore 'Use POST data for imgRdef save' Conflicting PRs (not included): - PR 532 will-moore 'Zarr layers' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..6a653e4 Previously merged: - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Merged PRs: - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' Generated by OMERO-plugins-push#43 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/43/)' 2026-08-16 01:40:12,863 [ scc.git] DEBUG [detached HEAD e79588f] merge master -Dorg -Ssuccess-only 2026-08-16 01:40:12,864 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-08-16 01:40:12,865 [ scc.merge] INFO Repository: ome/omero-plugins 2026-08-16 01:40:12,865 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,865 [ scc.merge] INFO 2026-08-16 01:40:12,865 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,865 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-08-16 01:40:12,865 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-08-16 01:40:12,865 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-08-16 01:40:12,865 [ scc.merge] INFO 2026-08-16 01:40:12,865 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-08-16 01:40:12,865 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,865 [ scc.merge] INFO 2026-08-16 01:40:12,865 [ scc.merge] INFO 2026-08-16 01:40:12,865 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-08-16 01:40:12,865 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,865 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-08-16 01:40:12,865 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,865 [ scc.merge] INFO 2026-08-16 01:40:12,865 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,865 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-08-16 01:40:12,866 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-08-16 01:40:12,866 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-08-16 01:40:12,866 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-08-16 01:40:12,866 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-08-16 01:40:12,866 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-08-16 01:40:12,866 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-08-16 01:40:12,866 [ scc.merge] INFO 2026-08-16 01:40:12,866 [ scc.merge] INFO Repository: ome/omero-figure 2026-08-16 01:40:12,866 [ scc.merge] INFO Updating 9cc36cde..5124b647 2026-08-16 01:40:12,866 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,866 [ scc.merge] INFO - PR 701 will-moore 'bump nanoid to 3.3.18 with 'npm audit fix'' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 698 dependabot[bot] 'Bump dompurify from 3.4.9 to 3.4.13' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 697 dependabot[bot] 'Bump postcss from 8.5.15 to 8.5.25' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 695 dependabot[bot] 'Bump immutable from 5.1.6 to 5.1.9' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 693 dependabot[bot] 'Bump dompurify from 3.4.0 to 3.4.9' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 691 dependabot[bot] 'Bump esbuild and vite' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-08-16 01:40:12,867 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-08-16 01:40:12,868 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,868 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 692 will-moore 'colorbar lut background fix' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 700 will-moore 'Fix parentheses in zoom level for loop for export script' 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-08-16 01:40:12,894 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Repository: ome/omero-gallery 2026-08-16 01:40:12,894 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-08-16 01:40:12,894 [ scc.merge] INFO 2026-08-16 01:40:12,894 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-08-16 01:40:12,894 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-08-16 01:40:12,894 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-08-16 01:40:12,895 [ scc.merge] INFO Updating 7a798cee..3af5a346 2026-08-16 01:40:12,895 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 559 dependabot[bot] 'Bump js-yaml and mocha' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 558 dependabot[bot] 'Bump fast-uri from 3.1.4 to 3.1.5' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 557 dependabot[bot] 'Bump socket.io-parser from 4.2.6 to 4.2.7' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 541 will-moore 'Only add channel to tile request string if active' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 556 dependabot[bot] 'Bump webpack-dev-server from 5.2.6 to 6.0.0' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 554 dependabot[bot] 'Bump http-proxy-middleware from 2.0.9 to 2.0.10' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 553 dependabot[bot] 'Bump postcss from 8.5.10 to 8.5.25' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 552 dependabot[bot] 'Bump tmp from 0.2.6 to 0.2.7' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 551 dependabot[bot] 'Bump body-parser from 1.20.5 to 1.20.6' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 550 dependabot[bot] 'Bump webpack-dev-server from 5.2.4 to 5.2.6' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 549 dependabot[bot] 'Bump shell-quote from 1.8.4 to 1.10.0' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 548 dependabot[bot] 'Bump fast-uri from 3.1.2 to 3.1.4' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 547 dependabot[bot] 'Bump websocket-driver from 0.7.4 to 0.7.5' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 540 dependabot[bot] 'Bump @babel/core from 7.5.4 to 7.29.6' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 539 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 537 dependabot[bot] 'Bump launch-editor from 2.13.2 to 2.14.1' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-08-16 01:40:12,895 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-08-16 01:40:12,928 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-08-16 01:40:12,928 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-08-16 01:40:12,928 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-08-16 01:40:12,928 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 562 will-moore 'Keyboard select roi' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 563 will-moore 'Use POST data for imgRdef save' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Repository: ome/omero-mapr 2026-08-16 01:40:12,929 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-08-16 01:40:12,929 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Repository: ome/omero-metadata 2026-08-16 01:40:12,929 [ scc.merge] INFO Updating 3cd120c..6a653e4 2026-08-16 01:40:12,929 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 95 sbesson 'Remove manual CHANGELOG in favor of automated GitHub releases' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 94 sbesson 'Cap pandas to 2.x and clean up unused dependencies' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,929 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-08-16 01:40:12,929 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-08-16 01:40:12,929 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Repository: ome/omero-parade 2026-08-16 01:40:12,930 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-08-16 01:40:12,930 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-08-16 01:40:12,930 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Repository: ome/omero-rois 2026-08-16 01:40:12,930 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-08-16 01:40:12,930 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-08-16 01:40:12,930 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Repository: ome/omero-signup 2026-08-16 01:40:12,930 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-08-16 01:40:12,930 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-08-16 01:40:12,930 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-08-16 01:40:12,930 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-08-16 01:40:12,930 [ scc.merge] INFO 2026-08-16 01:40:12,930 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,930 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: ome/omero-upload 2026-08-16 01:40:12,931 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-08-16 01:40:12,931 [ scc.merge] INFO Updating deab817..160d894 2026-08-16 01:40:12,931 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-08-16 01:40:12,931 [ scc.merge] INFO Excluded PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-08-16 01:40:12,931 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-08-16 01:40:12,931 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Conflicting PRs (not included): 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-08-16 01:40:12,931 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-08-16 01:40:12,931 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-08-16 01:40:12,931 [ scc.merge] INFO Already up to date. 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO 2026-08-16 01:40:12,931 [ scc.merge] INFO Repository: ome/scripts 2026-08-16 01:40:12,931 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-08-16 01:40:12,931 [ scc.merge] INFO Previously merged: 2026-08-16 01:40:12,931 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-08-16 01:40:12,932 [ scc.merge] INFO 2026-08-16 01:40:12,932 [ scc.merge] INFO Merged PRs: 2026-08-16 01:40:12,932 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`' 2026-08-16 01:40:12,932 [ scc.merge] INFO 2026-08-16 01:40:12,932 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-08-16 01:40:12,932 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:12,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-08-16 01:40:12,956 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:12,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:12,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-08-16 01:40:12,971 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:12,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:12,986 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-08-16 01:40:12,986 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-08-16 01:40:13,000 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,013 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,014 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-08-16 01:40:13,014 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-08-16 01:40:13,026 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-08-16 01:40:13,040 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-08-16 01:40:13,057 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,073 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-08-16 01:40:13,073 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-08-16 01:40:13,088 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-08-16 01:40:13,103 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,116 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-08-16 01:40:13,117 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-08-16 01:40:13,132 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,146 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-08-16 01:40:13,146 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,159 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-08-16 01:40:13,159 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-08-16 01:40:13,176 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-08-16 01:40:13,193 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,206 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-08-16 01:40:13,206 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-08-16 01:40:13,220 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-08-16 01:40:13,234 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-08-16 01:40:13,248 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-08-16 01:40:13,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-08-16 01:40:13,262 [ scc.git] DEBUG Calling 'git remote' 2026-08-16 01:40:13,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 27ecea1] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798cee nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 2023704] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-08-16 01:41:24,609 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-08-16 01:41:34,426 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-08-16 01:41:37,015 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-16 01:41:42,052 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-08-16 01:42:35,468 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS