Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 50 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-02-12 07:52:19,919 [ scc.config] DEBUG Found github.token 2026-02-12 07:52:19,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-12 07:52:20,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:20,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:21,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-12 07:52:21,096 [ scc.gh] DEBUG 4174 remaining from 5000 (Reset at 07:02 2026-02-12 07:52:21,097 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:21,099 [ scc.git] DEBUG Check current status 2026-02-12 07:52:21,099 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:21,101 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-12 07:52:21,102 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:21,149 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-12 07:52:21,152 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-12 07:52:21,155 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-12 07:52:21,158 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-12 07:52:21,162 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-12 07:52:21,164 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-12 07:52:21,168 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-12 07:52:21,171 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-12 07:52:21,173 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-12 07:52:21,176 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-12 07:52:21,179 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-12 07:52:21,182 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-12 07:52:21,185 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-12 07:52:21,188 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-12 07:52:21,191 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-12 07:52:21,194 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-12 07:52:21,197 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-12 07:52:21,199 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-12 07:52:21,202 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-12 07:52:21,204 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-12 07:52:21,207 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-12 07:52:21,211 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-12 07:52:21,214 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:21,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-12 07:52:22,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:22,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:23,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:23,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:23,437 [ scc.git] DEBUG Resetting... 2026-02-12 07:52:23,437 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-12 07:52:23,445 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-12 07:52:23,445 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-12 07:52:23,547 [ scc.git] DEBUG Check current status 2026-02-12 07:52:23,547 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:23,549 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-12 07:52:23,549 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:23,595 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-12 07:52:23,598 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-12 07:52:23,601 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-12 07:52:23,604 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-12 07:52:23,608 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-12 07:52:23,610 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-12 07:52:23,613 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-12 07:52:23,616 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-12 07:52:23,619 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-12 07:52:23,621 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-12 07:52:23,624 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-12 07:52:23,627 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-12 07:52:23,630 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-12 07:52:23,633 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-12 07:52:23,636 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-12 07:52:23,638 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-12 07:52:23,641 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-12 07:52:23,643 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-12 07:52:23,646 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-12 07:52:23,649 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-12 07:52:23,651 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-12 07:52:23,655 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-12 07:52:23,656 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-12 07:52:23,656 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-12 07:52:23,656 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-12 07:52:23,656 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-12 07:52:23,656 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-12 07:52:23,656 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:52:23,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-12 07:52:24,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-12 07:52:24,488 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:52:24,488 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-12 07:52:25,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-12 07:52:25,013 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:52:25,013 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-12 07:52:25,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-12 07:52:25,548 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:52:25,548 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-12 07:52:25,548 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:52:25,548 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:52:25,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:25,551 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:52:25,553 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:52:25,553 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:52:25,556 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:52:25,558 [ scc.git] DEBUG Already up to date. 2026-02-12 07:52:25,558 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-12 07:52:25,915 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:52:25,915 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-12 07:52:25,920 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-12 07:52:26,177 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:52:26,177 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-12 07:52:26,182 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-12 07:52:26,438 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:52:26,438 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-12 07:52:26,442 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:52:26,442 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:52:26,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:26,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-12 07:52:26,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:26,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-12 07:52:26,464 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:52:26,467 [ scc.git] DEBUG scripts | 2 +- 2026-02-12 07:52:26,467 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:52:26,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:26,615 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-12 07:52:26,617 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:26,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-12 07:52:26,634 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:52:26,637 [ scc.git] DEBUG omero-figure | 2 +- 2026-02-12 07:52:26,637 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:52:27,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:27,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-12 07:52:27,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:27,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-12 07:52:27,045 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:52:27,048 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-02-12 07:52:27,048 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:52:27,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:27,418 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:52:27,481 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-12 07:52:27,505 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-12 07:52:27,520 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-12 07:52:27,521 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:52:27,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:52:27,523 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:52:27,602 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f84d1f6fdd0> has no local changes 2026-02-12 07:52:27,602 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:52:27,674 [ scc.git] DEBUG [detached HEAD fda9d4f] merge master -Dorg -Snone 2026-02-12 07:52:27,674 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-12 07:52:27,675 [ scc.merge] INFO Already up to date. 2026-02-12 07:52:27,675 [ scc.merge] INFO 2026-02-12 07:52:27,675 [ scc.merge] INFO Merged PRs: 2026-02-12 07:52:27,675 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-12 07:52:27,675 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-12 07:52:27,675 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-12 07:52:27,675 [ scc.merge] INFO 2026-02-12 07:52:27,675 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-12 07:52:27,675 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9530c10ba9823fcba6b39139987bf4bcd4a60179' Submodule path 'omero-figure': checked out 'e241dc01b21d8800b6e34e087cbf7099046f68e6' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-02-12 07:52:34,726 [ scc.config] DEBUG Found github.token 2026-02-12 07:52:34,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-12 07:52:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:35,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:52:35,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-12 07:52:35,748 [ scc.gh] DEBUG 4160 remaining from 5000 (Reset at 07:02 2026-02-12 07:52:35,749 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:35,752 [ scc.git] DEBUG Check current status 2026-02-12 07:52:35,752 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:35,754 [ scc.git] DEBUG fda9d4f merge master -Dorg -Snone 2026-02-12 07:52:35,754 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:35,802 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-12 07:52:35,804 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-12 07:52:35,807 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-02-12 07:52:35,811 [ scc.git] DEBUG +9530c10ba9823fcba6b39139987bf4bcd4a60179 omero-cli-zarr (v0.7.0rc1-16-g9530c10) 2026-02-12 07:52:35,822 [ scc.git] DEBUG +e241dc01b21d8800b6e34e087cbf7099046f68e6 omero-figure (v7.3.1-36-ge241dc01) 2026-02-12 07:52:35,825 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-12 07:52:35,828 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-12 07:52:35,831 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-02-12 07:52:35,834 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-12 07:52:35,838 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-02-12 07:52:35,841 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-12 07:52:35,844 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-12 07:52:35,847 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-12 07:52:35,850 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-12 07:52:35,854 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-02-12 07:52:35,856 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-12 07:52:35,859 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-02-12 07:52:35,862 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-02-12 07:52:35,864 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-12 07:52:35,867 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-12 07:52:35,869 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-12 07:52:35,873 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-02-12 07:52:35,876 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:35,876 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-02-12 07:52:35,878 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-02-12 07:52:36,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-12 07:52:36,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:37,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:37,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:38,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:38,144 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:38,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-12 07:52:38,216 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:38,218 [ scc.git] DEBUG Check current status 2026-02-12 07:52:38,218 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:38,221 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-02-12 07:52:38,221 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:38,259 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:38,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-02-12 07:52:39,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:39,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:40,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:40,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:40,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:40,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:40,491 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-12 07:52:40,491 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:40,493 [ scc.git] DEBUG Check current status 2026-02-12 07:52:40,493 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:40,496 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-02-12 07:52:40,496 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:40,536 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:40,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-02-12 07:52:41,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:41,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:42,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:42,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:42,730 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:42,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:42,768 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-12 07:52:42,768 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:42,770 [ scc.git] DEBUG Check current status 2026-02-12 07:52:42,770 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:42,773 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-02-12 07:52:42,773 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:42,812 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:43,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-02-12 07:52:43,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:44,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:44,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:45,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:45,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:45,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:45,054 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-12 07:52:45,054 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:45,056 [ scc.git] DEBUG Check current status 2026-02-12 07:52:45,056 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:45,059 [ scc.git] DEBUG 9530c10 Merge pull request #192 from jburel/pixels_size 2026-02-12 07:52:45,059 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:45,098 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:45,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-02-12 07:52:46,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:46,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:46,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:47,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:47,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:47,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:47,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-12 07:52:47,411 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:47,413 [ scc.git] DEBUG Check current status 2026-02-12 07:52:47,414 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:47,416 [ scc.git] DEBUG e241dc01 Merge pull request #648 from kaabl/PR543-resurrect 2026-02-12 07:52:47,416 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:47,456 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:47,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-02-12 07:52:48,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:48,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:49,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:49,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:49,622 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:49,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:49,675 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-12 07:52:49,675 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:49,678 [ scc.git] DEBUG Check current status 2026-02-12 07:52:49,678 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:49,680 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-02-12 07:52:49,680 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:49,718 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:50,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-02-12 07:52:50,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:51,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:51,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:51,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:51,900 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:51,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:51,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-12 07:52:51,940 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:51,942 [ scc.git] DEBUG Check current status 2026-02-12 07:52:51,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:51,945 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-02-12 07:52:51,945 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:51,984 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:52,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-02-12 07:52:53,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:53,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:53,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:54,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:54,357 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:54,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:54,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-12 07:52:54,398 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:54,400 [ scc.git] DEBUG Check current status 2026-02-12 07:52:54,400 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:54,402 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-02-12 07:52:54,402 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:54,442 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:54,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-02-12 07:52:55,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:55,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:56,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:56,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:56,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:56,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:56,720 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-12 07:52:56,720 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:56,723 [ scc.git] DEBUG Check current status 2026-02-12 07:52:56,723 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:56,725 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-02-12 07:52:56,725 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:56,764 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:57,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-02-12 07:52:57,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:52:58,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:52:58,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:52:59,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:52:59,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:52:59,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:52:59,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-12 07:52:59,088 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:52:59,090 [ scc.git] DEBUG Check current status 2026-02-12 07:52:59,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:52:59,092 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-12 07:52:59,092 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:52:59,132 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:52:59,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-02-12 07:53:00,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:00,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:00,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:01,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:01,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:01,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:01,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-12 07:53:01,435 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:01,437 [ scc.git] DEBUG Check current status 2026-02-12 07:53:01,437 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:01,440 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-02-12 07:53:01,440 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:01,478 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:01,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-02-12 07:53:02,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:02,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:03,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:03,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:03,688 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:03,727 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:03,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-12 07:53:03,728 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:03,730 [ scc.git] DEBUG Check current status 2026-02-12 07:53:03,730 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:03,732 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-02-12 07:53:03,732 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:03,771 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:04,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-02-12 07:53:04,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:05,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:05,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:05,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:05,941 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:05,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:05,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-12 07:53:05,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:05,982 [ scc.git] DEBUG Check current status 2026-02-12 07:53:05,983 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:05,985 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-02-12 07:53:05,985 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:06,023 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:06,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-02-12 07:53:06,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:07,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:07,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:08,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:08,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:08,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:08,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-12 07:53:08,225 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:08,227 [ scc.git] DEBUG Check current status 2026-02-12 07:53:08,227 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:08,229 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-02-12 07:53:08,229 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:08,271 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:08,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-02-12 07:53:09,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:09,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:10,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:10,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:10,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:10,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:10,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-12 07:53:10,539 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:10,542 [ scc.git] DEBUG Check current status 2026-02-12 07:53:10,542 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:10,544 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-02-12 07:53:10,544 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:10,583 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:10,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-12 07:53:10,918 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-12 07:53:11,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-02-12 07:53:11,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:12,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:12,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:12,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:12,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:12,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:12,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-12 07:53:12,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:12,993 [ scc.git] DEBUG Check current status 2026-02-12 07:53:12,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:12,995 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-02-12 07:53:12,995 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:13,036 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:13,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-02-12 07:53:13,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:14,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:14,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:15,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:15,256 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:15,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:15,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-12 07:53:15,297 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:15,299 [ scc.git] DEBUG Check current status 2026-02-12 07:53:15,299 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:15,301 [ scc.git] DEBUG 160d894 Fix display of code 2026-02-12 07:53:15,301 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:15,340 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:15,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-02-12 07:53:16,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:16,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:17,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:17,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:17,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:17,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:17,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-12 07:53:17,648 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:17,650 [ scc.git] DEBUG Check current status 2026-02-12 07:53:17,651 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:17,653 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-12 07:53:17,653 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:17,692 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:17,692 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-02-12 07:53:18,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-02-12 07:53:18,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:19,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:19,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:20,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:20,049 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:20,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:20,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-12 07:53:20,088 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:20,090 [ scc.git] DEBUG Check current status 2026-02-12 07:53:20,090 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:20,092 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-02-12 07:53:20,092 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:20,133 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:20,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-12 07:53:20,469 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-12 07:53:20,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-02-12 07:53:21,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:21,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:22,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:22,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:22,580 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:22,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:22,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-12 07:53:22,620 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:22,622 [ scc.git] DEBUG Check current status 2026-02-12 07:53:22,622 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:22,624 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-02-12 07:53:22,624 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:22,663 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:22,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-12 07:53:22,999 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-12 07:53:23,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-02-12 07:53:23,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:24,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:24,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:25,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:25,065 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:25,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:25,104 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-12 07:53:25,105 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:25,106 [ scc.git] DEBUG Check current status 2026-02-12 07:53:25,107 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:25,109 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-02-12 07:53:25,109 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:25,147 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:25,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-02-12 07:53:26,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:26,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:27,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:27,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:27,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:27,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:27,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-12 07:53:27,538 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-12 07:53:27,540 [ scc.git] DEBUG Check current status 2026-02-12 07:53:27,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:27,543 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-02-12 07:53:27,543 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:27,584 [ scc.config] DEBUG Found remote.origin.url 2026-02-12 07:53:27,584 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-02-12 07:53:27,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-12 07:53:27,919 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-12 07:53:28,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-02-12 07:53:28,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-12 07:53:29,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-12 07:53:29,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-12 07:53:29,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-12 07:53:29,994 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:30,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:30,033 [ scc.git] DEBUG Resetting... 2026-02-12 07:53:30,033 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-12 07:53:30,040 [ scc.git] DEBUG HEAD is now at fda9d4f merge master -Dorg -Snone 2026-02-12 07:53:30,040 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-12 07:53:30,094 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-02-12 07:53:30,110 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-02-12 07:53:30,141 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-12 07:53:30,159 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-12 07:53:30,174 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-02-12 07:53:30,197 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-02-12 07:53:30,211 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-02-12 07:53:30,223 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-02-12 07:53:30,249 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-12 07:53:30,252 [ scc.git] DEBUG Check current status 2026-02-12 07:53:30,252 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-12 07:53:30,254 [ scc.git] DEBUG fda9d4f merge master -Dorg -Snone 2026-02-12 07:53:30,255 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-12 07:53:30,300 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-12 07:53:30,303 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-12 07:53:30,306 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-12 07:53:30,309 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-12 07:53:30,312 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-02-12 07:53:30,315 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-12 07:53:30,317 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-12 07:53:30,320 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-02-12 07:53:30,323 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-12 07:53:30,326 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-12 07:53:30,329 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-12 07:53:30,331 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-12 07:53:30,334 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-12 07:53:30,337 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-12 07:53:30,340 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-12 07:53:30,343 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-12 07:53:30,346 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-12 07:53:30,349 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-12 07:53:30,352 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-12 07:53:30,355 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-12 07:53:30,358 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-12 07:53:30,362 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-02-12 07:53:30,362 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-12 07:53:30,362 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-12 07:53:30,362 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-12 07:53:30,362 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-12 07:53:30,363 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-12 07:53:30,363 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-02-12 07:53:30,363 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:53:30,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-12 07:53:31,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-12 07:53:31,217 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:53:31,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-12 07:53:32,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:32,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-12 07:53:33,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:53:33,124 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-12 07:53:33,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-12 07:53:33,621 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:53:34,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-12 07:53:34,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:35,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-12 07:53:35,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:53:35,489 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-12 07:53:36,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-12 07:53:36,022 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:53:36,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-12 07:53:36,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:37,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-12 07:53:37,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:53:37,941 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-12 07:53:37,942 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:53:37,942 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:37,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:37,944 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:53:37,946 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:53:37,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:53:37,949 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:53:37,952 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:37,952 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-12 07:53:38,217 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:53:38,217 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-12 07:53:38,222 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-12 07:53:38,480 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:53:38,480 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-12 07:53:38,485 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-12 07:53:38,743 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-12 07:53:38,743 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-12 07:53:38,748 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:53:38,748 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:38,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:38,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-12 07:53:38,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:38,755 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-12 07:53:38,757 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:38,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:53:38,938 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-12 07:53:38,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:38,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-12 07:53:38,945 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:39,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:53:39,352 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-12 07:53:39,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:39,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-12 07:53:39,360 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:39,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:53:39,755 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:53:39,805 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:39,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:39,808 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:53:40,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-02-12 07:53:40,200 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:53:40,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-12 07:53:40,200 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:40,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:40,203 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:53:40,205 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:53:40,205 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:53:40,208 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:53:40,210 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:40,210 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:53:40,210 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:40,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:40,213 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:53:40,251 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:40,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:40,253 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:40,289 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:53:40,292 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95122e1b10> has no local changes 2026-02-12 07:53:40,292 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:53:40,297 [ scc.git] DEBUG [detached HEAD fc8f676] merge master -Dorg -Ssuccess-only 2026-02-12 07:53:40,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:40,297 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:53:40,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-02-12 07:53:41,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-02-12 07:53:41,353 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:53:41,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-12 07:53:42,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:42,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:53:43,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-12 07:53:43,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:53:43,812 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:53:44,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-02-12 07:53:45,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-02-12 07:53:45,020 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:53:45,020 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-12 07:53:45,020 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:45,020 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:45,023 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:53:45,025 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:53:45,025 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:53:45,028 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:53:45,031 [ scc.git] DEBUG Already up to date. 2026-02-12 07:53:45,031 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-02-12 07:53:45,299 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-02-12 07:53:45,300 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-02-12 07:53:45,304 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:53:45,304 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:45,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:45,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-12 07:53:45,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:45,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-12 07:53:45,318 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:53:45,321 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:53:45,321 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:53:45,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:53:45,484 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:53:45,523 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:45,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:45,525 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:45,563 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:53:45,566 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951288de90> has no local changes 2026-02-12 07:53:45,566 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:53:45,572 [ scc.git] DEBUG [detached HEAD fbe91c6] merge master -Dorg -Ssuccess-only 2026-02-12 07:53:45,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:45,572 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:53:46,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-02-12 07:53:46,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-02-12 07:53:47,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-02-12 07:53:47,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-12 07:53:48,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:48,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:53:49,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-12 07:53:49,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:53:49,460 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-02-12 07:53:49,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-02-12 07:53:50,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-02-12 07:53:50,447 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:53:50,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-12 07:53:50,447 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:50,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:50,450 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:53:50,453 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:53:50,453 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:53:50,456 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:53:50,463 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-02-12 07:53:51,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-02-12 07:53:51,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-02-12 07:53:52,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-02-12 07:53:53,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-02-12 07:53:53,306 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-02-12 07:53:53,692 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-02-12 07:53:53,692 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-02-12 07:53:53,696 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:53:53,696 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:53,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:53,699 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-12 07:53:53,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:53,704 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-12 07:53:53,712 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-02-12 07:53:53,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:53:53,715 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-02-12 07:53:53,715 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-02-12 07:53:53,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:53:53,880 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:53:53,918 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:53:53,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:53:53,920 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:53:53,956 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:53:53,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95128b4590> has no local changes 2026-02-12 07:53:53,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:53:53,966 [ scc.git] DEBUG [detached HEAD f57bc43] merge master -Dorg -Ssuccess-only 2026-02-12 07:53:53,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:53:53,966 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:53:54,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-02-12 07:53:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-02-12 07:53:55,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-02-12 07:53:55,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-12 07:53:56,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:56,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:53:57,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-12 07:53:57,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:53:58,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-12 07:53:58,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-02-12 07:53:58,639 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-12 07:53:59,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-02-12 07:53:59,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-02-12 07:54:00,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-02-12 07:54:00,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-02-12 07:54:01,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-12 07:54:01,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:02,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:02,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-12 07:54:03,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:03,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-12 07:54:04,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-02-12 07:54:04,105 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-12 07:54:04,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-02-12 07:54:05,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-02-12 07:54:05,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-12 07:54:06,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:06,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:07,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-12 07:54:07,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:08,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-12 07:54:08,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-02-12 07:54:08,631 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-02-12 07:54:09,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-02-12 07:54:09,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-02-12 07:54:10,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675 HTTP/1.1" 200 None 2026-02-12 07:54:10,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:11,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:11,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675 HTTP/1.1" 200 None 2026-02-12 07:54:11,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/7e2a9ebeafdebb27335a76d20f61bbde860e1675?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:12,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675 HTTP/1.1" 200 None 2026-02-12 07:54:12,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7e2a9ebeafdebb27335a76d20f61bbde860e1675/status HTTP/1.1" 200 None 2026-02-12 07:54:12,983 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-12 07:54:13,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-02-12 07:54:13,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-02-12 07:54:14,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-02-12 07:54:14,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-02-12 07:54:15,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-02-12 07:54:15,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-02-12 07:54:16,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-02-12 07:54:17,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-02-12 07:54:17,100 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:54:17,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-12 07:54:17,101 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:54:17,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:17,103 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:54:17,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:54:17,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:54:17,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:54:17,121 [ scc.git] DEBUG Updating 11d3587..9530c10 2026-02-12 07:54:17,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-02-12 07:54:18,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-02-12 07:54:19,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-02-12 07:54:20,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-02-12 07:54:20,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-02-12 07:54:21,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-02-12 07:54:22,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-02-12 07:54:23,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-02-12 07:54:23,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-02-12 07:54:24,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-02-12 07:54:25,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-02-12 07:54:25,418 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2026-02-12 07:54:25,685 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-12 07:54:25,685 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2026-02-12 07:54:25,690 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-02-12 07:54:26,104 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-12 07:54:26,104 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-02-12 07:54:26,107 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-02-12 07:54:26,360 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-12 07:54:26,360 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-02-12 07:54:26,364 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-02-12 07:54:26,620 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-12 07:54:26,620 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-02-12 07:54:26,625 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:54:26,625 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:54:26,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:26,633 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e2a9ebeafdebb27335a76d20f61bbde860e1675' 2026-02-12 07:54:26,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:26,649 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 7e2a9ebeafdebb27335a76d20f61bbde860e1675' 2026-02-12 07:54:26,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:54:26,669 [ scc.git] DEBUG .isort.cfg | 2 +- 2026-02-12 07:54:26,669 [ scc.git] DEBUG README.rst | 5 +- 2026-02-12 07:54:26,669 [ scc.git] DEBUG setup.py | 5 +- 2026-02-12 07:54:26,669 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2026-02-12 07:54:26,669 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2026-02-12 07:54:26,669 [ scc.git] DEBUG src/omero_zarr/masks.py | 35 +++++------ 2026-02-12 07:54:26,669 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 99 +++++++++++++++++++---------- 2026-02-12 07:54:26,669 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2026-02-12 07:54:26,670 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 61 +++++++----------- 2026-02-12 07:54:26,670 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2026-02-12 07:54:26,670 [ scc.git] DEBUG test/integration/clitest/test_import.py | 9 +++ 2026-02-12 07:54:26,670 [ scc.git] DEBUG 11 files changed, 238 insertions(+), 121 deletions(-) 2026-02-12 07:54:26,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:54:26,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-12 07:54:26,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:26,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging README.rst 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-12 07:54:26,839 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:54:26,839 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:54:26,842 [ scc.git] DEBUG Calling 'git reset --hard 2a335e8fceb47aeefe10b52c15ee1267e340b402' 2026-02-12 07:54:26,847 [ scc.git] DEBUG HEAD is now at 2a335e8 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-12 07:54:27,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:54:27,223 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-12 07:54:27,229 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-12 07:54:27,232 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/masks.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/raw_pixels.py --conflicts 2026-02-12 07:54:27,236 [ scc.config] DEBUG Found github.token 2026-02-12 07:54:27,236 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-02-12 07:54:27,236 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-12 07:54:27,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:27,248 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-12 07:54:27,259 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-12 07:54:27,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-12 07:54:27,259 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-12 07:54:27,259 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-12 07:54:27,260 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:54:27,260 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:54:27,263 [ scc.git] DEBUG Calling 'git reset --hard 2a335e8fceb47aeefe10b52c15ee1267e340b402' 2026-02-12 07:54:27,267 [ scc.git] DEBUG HEAD is now at 2a335e8 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-12 07:54:27,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:54:27,616 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-12 07:54:27,619 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-12 07:54:27,622 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-02-12 07:54:27,624 [ scc.config] DEBUG Found github.token 2026-02-12 07:54:27,624 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-02-12 07:54:27,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-12 07:54:27,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:27,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-12 07:54:27,640 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-12 07:54:27,640 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-02-12 07:54:27,640 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-02-12 07:54:27,640 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-02-12 07:54:27,640 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-02-12 07:54:27,640 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:54:27,640 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:54:27,643 [ scc.git] DEBUG Calling 'git reset --hard 2a335e8fceb47aeefe10b52c15ee1267e340b402' 2026-02-12 07:54:27,647 [ scc.git] DEBUG HEAD is now at 2a335e8 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-12 07:54:28,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:54:28,036 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-12 07:54:28,039 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-12 07:54:28,042 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-02-12 07:54:28,044 [ scc.config] DEBUG Found github.token 2026-02-12 07:54:28,045 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-02-12 07:54:28,045 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:54:28,083 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:54:28,083 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:28,085 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:54:28,122 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:54:28,125 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9514d382d0> has no local changes 2026-02-12 07:54:28,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:54:28,131 [ scc.git] DEBUG [detached HEAD 7a75344] merge master -Dorg -Ssuccess-only 2026-02-12 07:54:28,132 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:54:28,132 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:54:28,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-02-12 07:54:29,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667 HTTP/1.1" 200 None 2026-02-12 07:54:29,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667/comments HTTP/1.1" 200 None 2026-02-12 07:54:30,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None 2026-02-12 07:54:30,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:31,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:31,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None 2026-02-12 07:54:32,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/317160c08a2bdc467f7867954ec7b633d4e8f5cd?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:32,251 [ scc.repo] DEBUG - PR 667 Tom-TBT 'Label suggestion interface' 2026-02-12 07:54:32,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-02-12 07:54:33,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None 2026-02-12 07:54:33,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:34,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:34,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None 2026-02-12 07:54:35,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:35,095 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-02-12 07:54:35,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665 HTTP/1.1" 200 None 2026-02-12 07:54:36,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665/comments HTTP/1.1" 200 None 2026-02-12 07:54:36,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-12 07:54:37,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:37,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:37,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-12 07:54:38,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bdf45b550f4528d17eba292491bbb620ad49022b?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:38,444 [ scc.repo] DEBUG - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-12 07:54:38,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None 2026-02-12 07:54:39,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None 2026-02-12 07:54:39,442 [ scc.repo] DEBUG # ... Include label: include 2026-02-12 07:54:39,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-12 07:54:40,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:41,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:41,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-12 07:54:42,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ef2d52de60235379f42877477aa2088551610bea?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:42,008 [ scc.repo] DEBUG - PR 664 Nirkan 'Handle many channels ' 2026-02-12 07:54:42,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-02-12 07:54:42,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-02-12 07:54:43,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None 2026-02-12 07:54:43,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:44,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:44,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None 2026-02-12 07:54:45,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/03062bc197e09e7cfcefd73bd86fdb8530cfa819?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:45,354 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-02-12 07:54:45,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-02-12 07:54:46,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-02-12 07:54:46,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-12 07:54:47,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:47,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:48,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-12 07:54:48,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/21baa4e8ba004395bd7a27d520edaa2ed4a540ac?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:48,733 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-12 07:54:49,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-02-12 07:54:49,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None 2026-02-12 07:54:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None 2026-02-12 07:54:50,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:51,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:51,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None 2026-02-12 07:54:52,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b6cb152f9484c3a0886812ad5c791c580ee456f6?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:52,024 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-12 07:54:52,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-02-12 07:54:52,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-02-12 07:54:53,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe57b6f9be1a011d62d0f89e8947c103d6e802c6 HTTP/1.1" 200 None 2026-02-12 07:54:53,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe57b6f9be1a011d62d0f89e8947c103d6e802c6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:54,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe57b6f9be1a011d62d0f89e8947c103d6e802c6/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:54,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe57b6f9be1a011d62d0f89e8947c103d6e802c6 HTTP/1.1" 200 None 2026-02-12 07:54:55,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fe57b6f9be1a011d62d0f89e8947c103d6e802c6?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:55,385 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-12 07:54:55,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-02-12 07:54:56,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-02-12 07:54:56,350 [ scc.repo] DEBUG # ... Include label: include 2026-02-12 07:54:56,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-12 07:54:57,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:54:57,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:54:58,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-12 07:54:58,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:54:58,739 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-12 07:54:59,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-02-12 07:54:59,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-02-12 07:54:59,747 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:54:59,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-12 07:54:59,747 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:54:59,747 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:54:59,750 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:54:59,752 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:54:59,753 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:54:59,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:54:59,794 [ scc.git] DEBUG Updating 9cc36cde..e241dc01 2026-02-12 07:55:00,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-02-12 07:55:01,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-02-12 07:55:01,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-02-12 07:55:02,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-02-12 07:55:03,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-02-12 07:55:04,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-02-12 07:55:04,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-02-12 07:55:05,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-02-12 07:55:05,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-02-12 07:55:06,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-02-12 07:55:07,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-02-12 07:55:07,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-02-12 07:55:08,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-02-12 07:55:09,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-02-12 07:55:09,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-02-12 07:55:10,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-02-12 07:55:11,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-02-12 07:55:12,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-02-12 07:55:12,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-02-12 07:55:13,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-02-12 07:55:14,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-02-12 07:55:14,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-02-12 07:55:14,979 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-02-12 07:55:15,258 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:15,258 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-02-12 07:55:15,263 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-02-12 07:55:15,524 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:15,524 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-02-12 07:55:15,529 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-02-12 07:55:15,788 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:15,788 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-02-12 07:55:15,792 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-02-12 07:55:16,043 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:16,043 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-02-12 07:55:16,047 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-02-12 07:55:16,469 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:16,469 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-02-12 07:55:16,473 [ scc.git] DEBUG Calling 'git fetch origin pull/664/head' 2026-02-12 07:55:16,735 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:16,735 [ scc.git] DEBUG * branch refs/pull/664/head -> FETCH_HEAD 2026-02-12 07:55:16,739 [ scc.git] DEBUG Calling 'git fetch origin pull/665/head' 2026-02-12 07:55:17,001 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:17,001 [ scc.git] DEBUG * branch refs/pull/665/head -> FETCH_HEAD 2026-02-12 07:55:17,006 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-02-12 07:55:17,575 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:17,575 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-02-12 07:55:17,578 [ scc.git] DEBUG Calling 'git fetch origin pull/667/head' 2026-02-12 07:55:17,838 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-12 07:55:17,838 [ scc.git] DEBUG * branch refs/pull/667/head -> FETCH_HEAD 2026-02-12 07:55:17,842 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:55:17,842 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:17,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:17,844 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-12 07:55:17,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:17,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-12 07:55:17,878 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-12 07:55:17,878 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-12 07:55:17,878 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-12 07:55:17,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:17,884 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-02-12 07:55:17,884 [ scc.git] DEBUG src/index.html | 11 ++ 2026-02-12 07:55:17,884 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-02-12 07:55:17,884 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-02-12 07:55:18,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:18,052 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fe57b6f9be1a011d62d0f89e8947c103d6e802c6' 2026-02-12 07:55:18,057 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:18,059 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) fe57b6f9be1a011d62d0f89e8947c103d6e802c6' 2026-02-12 07:55:18,074 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-12 07:55:18,074 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-12 07:55:18,074 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:18,079 [ scc.git] DEBUG src/index.html | 5 ++ 2026-02-12 07:55:18,079 [ scc.git] DEBUG src/js/models/figure_model.js | 111 ++++++++++++++++++++++++++++++++++++++---- 2026-02-12 07:55:18,079 [ scc.git] DEBUG src/js/models/panel_model.js | 33 ++++++++++--- 2026-02-12 07:55:18,079 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++ 2026-02-12 07:55:18,080 [ scc.git] DEBUG 4 files changed, 140 insertions(+), 16 deletions(-) 2026-02-12 07:55:18,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:18,469 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6cb152f9484c3a0886812ad5c791c580ee456f6' 2026-02-12 07:55:18,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:18,477 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) b6cb152f9484c3a0886812ad5c791c580ee456f6' 2026-02-12 07:55:18,491 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-02-12 07:55:18,493 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:18,496 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-02-12 07:55:18,496 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 74 +++++++++++++++------- 2026-02-12 07:55:18,496 [ scc.git] DEBUG .../modal_dialogs/roi_modal_roi.template.html | 6 ++ 2026-02-12 07:55:18,496 [ scc.git] DEBUG .../modal_dialogs/roi_modal_shape.template.html | 5 ++ 2026-02-12 07:55:18,496 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 +- 2026-02-12 07:55:18,496 [ scc.git] DEBUG 5 files changed, 71 insertions(+), 24 deletions(-) 2026-02-12 07:55:18,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:18,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-12 07:55:18,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:18,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-12 07:55:18,919 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-12 07:55:18,920 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 594 +++++++++++++++------ 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes 2026-02-12 07:55:18,925 [ scc.git] DEBUG 7 files changed, 434 insertions(+), 160 deletions(-) 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-02-12 07:55:18,925 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-02-12 07:55:19,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:19,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...03062bc197e09e7cfcefd73bd86fdb8530cfa819' 2026-02-12 07:55:19,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:19,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 03062bc197e09e7cfcefd73bd86fdb8530cfa819' 2026-02-12 07:55:19,319 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-12 07:55:19,319 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-12 07:55:19,319 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-12 07:55:19,319 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-02-12 07:55:19,319 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-12 07:55:19,320 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:19,327 [ scc.git] DEBUG omero_figure/views.py | 11 +- 2026-02-12 07:55:19,327 [ scc.git] DEBUG package-lock.json | 72 ++- 2026-02-12 07:55:19,327 [ scc.git] DEBUG package.json | 4 +- 2026-02-12 07:55:19,327 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++- 2026-02-12 07:55:19,327 [ scc.git] DEBUG src/js/models/panel_model.js | 36 +- 2026-02-12 07:55:19,327 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 +++++++++++++++++++++ 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 + 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +-- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/js/views/util.js | 48 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 + 2026-02-12 07:55:19,328 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +- 2026-02-12 07:55:19,328 [ scc.git] DEBUG src/test.html | 25 ++ 2026-02-12 07:55:19,328 [ scc.git] DEBUG 22 files changed, 832 insertions(+), 142 deletions(-) 2026-02-12 07:55:19,328 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js 2026-02-12 07:55:19,328 [ scc.git] DEBUG create mode 100644 src/test.html 2026-02-12 07:55:19,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:19,695 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef2d52de60235379f42877477aa2088551610bea' 2026-02-12 07:55:19,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:19,704 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 664 (Handle many channels ) ef2d52de60235379f42877477aa2088551610bea' 2026-02-12 07:55:19,725 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-12 07:55:19,725 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-12 07:55:19,725 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-12 07:55:19,725 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-12 07:55:19,726 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:55:19,726 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:55:19,731 [ scc.git] DEBUG Calling 'git reset --hard 3412157c384801d9f05483ef194ec694ec470c2e' 2026-02-12 07:55:19,740 [ scc.git] DEBUG HEAD is now at 3412157c merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-12 07:55:20,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:20,113 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 ef2d52de60235379f42877477aa2088551610bea' 2026-02-12 07:55:20,118 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-12 07:55:20,121 [ scc.git] INFO - PR 664 Nirkan 'Handle many channels ' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js --conflicts 2026-02-12 07:55:20,123 [ scc.config] DEBUG Found github.token 2026-02-12 07:55:20,123 [ scc.git] DEBUG Not adding comment to issue #664, already --conflicts. 2026-02-12 07:55:20,123 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-12 07:55:20,128 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:20,130 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 665 (Ensure projection parameters are within bounds in loadJSON and setID) bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-12 07:55:20,148 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-12 07:55:20,148 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-02-12 07:55:20,148 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-12 07:55:20,148 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-12 07:55:20,148 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-02-12 07:55:20,149 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:55:20,149 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:55:20,152 [ scc.git] DEBUG Calling 'git reset --hard 3412157c384801d9f05483ef194ec694ec470c2e' 2026-02-12 07:55:20,158 [ scc.git] DEBUG HEAD is now at 3412157c merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-12 07:55:20,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:20,522 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-12 07:55:20,527 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-12 07:55:20,531 [ scc.git] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #664 Nirkan 'Handle many channels ' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js - src/js/models/figure_model.js --conflicts 2026-02-12 07:55:20,533 [ scc.config] DEBUG Found github.token 2026-02-12 07:55:20,533 [ scc.git] DEBUG Not adding comment to issue #665, already --conflicts. 2026-02-12 07:55:20,533 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c495cf373b4f9a6ab9eb2c1ba903635ff62b947a' 2026-02-12 07:55:20,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:20,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) c495cf373b4f9a6ab9eb2c1ba903635ff62b947a' 2026-02-12 07:55:20,562 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-12 07:55:20,562 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-12 07:55:20,562 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-12 07:55:20,562 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-12 07:55:20,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:20,569 [ scc.git] DEBUG .github/workflows/pages.yml | 28 ++++++++ 2026-02-12 07:55:20,569 [ scc.git] DEBUG .gitignore | 1 + 2026-02-12 07:55:20,569 [ scc.git] DEBUG deploy_ghpages.sh | 7 ++ 2026-02-12 07:55:20,569 [ scc.git] DEBUG omero_figure/views.py | 8 ++- 2026-02-12 07:55:20,569 [ scc.git] DEBUG package.json | 2 + 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/css/figure.css | 3 +- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/index.html | 79 ++++++++++++++++++++-- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/main.js | 36 +++++++--- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/models/figure_model.js | 25 +++++++ 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 15 +++-- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/views/figure_view.js | 101 ++++++++++++++++++++--------- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/views/lutpicker.js | 34 ++++++++-- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 73 +++++++++++++++++++++ 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/js/views/util.js | 13 ++++ 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/templates/channel_slider.template.html | 4 +- 2026-02-12 07:55:20,569 [ scc.git] DEBUG src/templates/lut_picker.template.html | 6 +- 2026-02-12 07:55:20,569 [ scc.git] DEBUG vite.config.js | 12 +++- 2026-02-12 07:55:20,569 [ scc.git] DEBUG 17 files changed, 388 insertions(+), 59 deletions(-) 2026-02-12 07:55:20,569 [ scc.git] DEBUG create mode 100644 .github/workflows/pages.yml 2026-02-12 07:55:20,569 [ scc.git] DEBUG create mode 100755 deploy_ghpages.sh 2026-02-12 07:55:20,569 [ scc.git] DEBUG create mode 100644 src/js/views/open_local_file_modal.js 2026-02-12 07:55:20,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:20,949 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...317160c08a2bdc467f7867954ec7b633d4e8f5cd' 2026-02-12 07:55:20,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:20,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 667 (Label suggestion interface) 317160c08a2bdc467f7867954ec7b633d4e8f5cd' 2026-02-12 07:55:20,975 [ scc.git] DEBUG Auto-merging src/css/figure.css 2026-02-12 07:55:20,976 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2026-02-12 07:55:20,976 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:20,980 [ scc.git] DEBUG src/css/figure.css | 15 + 2026-02-12 07:55:20,980 [ scc.git] DEBUG src/js/views/label_suggestions.js | 697 ++++++++++++++++++++++++++ 2026-02-12 07:55:20,980 [ scc.git] DEBUG src/js/views/right_panel_view.js | 55 ++ 2026-02-12 07:55:20,981 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 64 +-- 2026-02-12 07:55:20,981 [ scc.git] DEBUG 4 files changed, 776 insertions(+), 55 deletions(-) 2026-02-12 07:55:20,981 [ scc.git] DEBUG create mode 100644 src/js/views/label_suggestions.js 2026-02-12 07:55:21,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:21,351 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:55:21,392 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:21,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:21,394 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:55:21,431 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:55:21,438 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95122f0890> has no local changes 2026-02-12 07:55:21,438 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:55:21,445 [ scc.git] DEBUG [detached HEAD 2ac8d254] merge master -Dorg -Ssuccess-only 2026-02-12 07:55:21,445 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:55:21,445 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:55:21,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-02-12 07:55:22,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-02-12 07:55:22,383 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:22,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-12 07:55:23,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:23,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:55:24,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-12 07:55:24,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:24,961 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:55:25,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-02-12 07:55:25,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-02-12 07:55:26,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-12 07:55:26,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:27,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-12 07:55:27,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:27,808 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-02-12 07:55:27,808 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:55:27,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-12 07:55:27,808 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:27,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:27,811 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:55:27,813 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:55:27,813 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:55:27,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:55:27,819 [ scc.git] DEBUG Already up to date. 2026-02-12 07:55:27,819 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-02-12 07:55:28,081 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-12 07:55:28,081 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-02-12 07:55:28,085 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-02-12 07:55:28,353 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-12 07:55:28,353 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-02-12 07:55:28,357 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:55:28,357 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:28,357 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:28,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-12 07:55:28,362 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:28,364 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-12 07:55:28,371 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-02-12 07:55:28,372 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:28,375 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-02-12 07:55:28,375 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-02-12 07:55:28,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:28,533 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-12 07:55:28,536 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:28,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-12 07:55:28,545 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:28,548 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:55:28,548 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:55:28,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:28,929 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:55:28,968 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:28,968 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:28,970 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:55:29,007 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:55:29,011 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9512391990> has no local changes 2026-02-12 07:55:29,011 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:55:29,016 [ scc.git] DEBUG [detached HEAD b19b12e] merge master -Dorg -Ssuccess-only 2026-02-12 07:55:29,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:55:29,017 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:55:29,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-02-12 07:55:30,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-02-12 07:55:30,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-02-12 07:55:31,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-02-12 07:55:31,232 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:31,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-12 07:55:32,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:32,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:55:33,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-12 07:55:33,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:33,787 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-12 07:55:34,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-02-12 07:55:34,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-02-12 07:55:35,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-02-12 07:55:35,316 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:35,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-12 07:55:36,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:36,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-12 07:55:37,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:37,230 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-12 07:55:37,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-02-12 07:55:37,754 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:38,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-12 07:55:38,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:39,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-12 07:55:39,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:39,584 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-12 07:55:40,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-02-12 07:55:40,088 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:40,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-12 07:55:41,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:41,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-12 07:55:42,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:42,048 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-12 07:55:42,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-02-12 07:55:43,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-02-12 07:55:43,026 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:43,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-12 07:55:43,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:44,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-12 07:55:44,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:44,893 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-12 07:55:45,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-02-12 07:55:45,384 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:45,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-12 07:55:46,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:46,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-12 07:55:47,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:47,389 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-12 07:55:47,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-02-12 07:55:47,898 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:55:48,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-12 07:55:48,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:49,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-12 07:55:49,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:49,898 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-12 07:55:49,898 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:55:49,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-12 07:55:49,899 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:49,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:49,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:55:49,904 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:55:49,904 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:55:49,906 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:55:49,909 [ scc.git] DEBUG Already up to date. 2026-02-12 07:55:49,909 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-02-12 07:55:50,176 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:50,176 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-02-12 07:55:50,180 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-02-12 07:55:50,444 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:50,444 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-02-12 07:55:50,448 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-02-12 07:55:50,707 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:50,707 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-02-12 07:55:50,711 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-02-12 07:55:50,961 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:50,961 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-02-12 07:55:50,965 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-02-12 07:55:51,324 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:51,324 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-02-12 07:55:51,329 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-02-12 07:55:51,583 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:51,583 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-02-12 07:55:51,587 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-02-12 07:55:51,966 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-12 07:55:51,966 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-02-12 07:55:51,971 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:55:51,971 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:51,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:51,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-12 07:55:51,976 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:51,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-12 07:55:51,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:51,990 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-02-12 07:55:51,990 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-02-12 07:55:52,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:52,145 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-12 07:55:52,147 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:52,149 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-12 07:55:52,163 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:52,163 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:52,168 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-02-12 07:55:52,168 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-02-12 07:55:52,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:52,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-12 07:55:52,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:52,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-12 07:55:52,569 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:52,569 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-12 07:55:52,569 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:55:52,570 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:55:52,572 [ scc.git] DEBUG Calling 'git reset --hard 8f12ebbbc7f5450e8a2a5adca397f501351e4d42' 2026-02-12 07:55:52,577 [ scc.git] DEBUG HEAD is now at 8f12ebb merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-02-12 07:55:52,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:52,945 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-12 07:55:52,948 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-12 07:55:52,951 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-02-12 07:55:52,952 [ scc.config] DEBUG Found github.token 2026-02-12 07:55:52,953 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-02-12 07:55:52,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-12 07:55:52,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:52,957 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-12 07:55:52,972 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:52,973 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:52,978 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-02-12 07:55:52,978 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-02-12 07:55:53,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:53,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-12 07:55:53,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:53,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-12 07:55:53,382 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:53,382 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:55:53,387 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-02-12 07:55:53,387 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-02-12 07:55:53,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:53,769 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-12 07:55:53,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:53,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-12 07:55:53,790 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:53,790 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-12 07:55:53,791 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:55:53,791 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:55:53,793 [ scc.git] DEBUG Calling 'git reset --hard 66f00a12b5112c6611dbab8a683c53d6281cd4a1' 2026-02-12 07:55:53,798 [ scc.git] DEBUG HEAD is now at 66f00a1 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-12 07:55:54,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:54,187 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-12 07:55:54,190 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-12 07:55:54,193 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-02-12 07:55:54,195 [ scc.config] DEBUG Found github.token 2026-02-12 07:55:54,195 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-02-12 07:55:54,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-12 07:55:54,198 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:54,200 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-12 07:55:54,217 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:55:54,217 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-12 07:55:54,218 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:55:54,218 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:55:54,220 [ scc.git] DEBUG Calling 'git reset --hard 66f00a12b5112c6611dbab8a683c53d6281cd4a1' 2026-02-12 07:55:54,225 [ scc.git] DEBUG HEAD is now at 66f00a1 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-12 07:55:54,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:55:54,760 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-12 07:55:54,762 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-12 07:55:54,765 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-02-12 07:55:54,767 [ scc.config] DEBUG Found github.token 2026-02-12 07:55:54,767 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-02-12 07:55:54,767 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:55:54,805 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:55:54,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:55:54,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:55:54,844 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:55:54,849 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95122ed150> has no local changes 2026-02-12 07:55:54,849 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:55:54,855 [ scc.git] DEBUG [detached HEAD 0fed769] merge master -Dorg -Ssuccess-only 2026-02-12 07:55:54,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:55:54,856 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:55:55,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-02-12 07:55:56,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-02-12 07:55:56,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-12 07:55:57,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:55:57,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:55:58,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-12 07:55:58,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:55:58,430 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-02-12 07:55:58,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-02-12 07:55:59,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-12 07:55:59,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:00,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:01,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-12 07:56:01,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:01,475 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-12 07:56:02,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-02-12 07:56:02,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-02-12 07:56:03,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-02-12 07:56:03,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-02-12 07:56:04,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-02-12 07:56:04,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-02-12 07:56:04,537 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:56:05,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-12 07:56:05,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:06,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:06,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-12 07:56:07,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:07,129 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-12 07:56:07,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-02-12 07:56:07,610 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:56:08,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-12 07:56:08,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:09,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-12 07:56:09,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:09,645 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-12 07:56:10,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-02-12 07:56:10,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-02-12 07:56:11,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-02-12 07:56:11,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-02-12 07:56:12,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-12 07:56:12,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:13,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-12 07:56:13,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:13,499 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-12 07:56:13,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-02-12 07:56:14,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-02-12 07:56:14,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-12 07:56:15,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:15,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-12 07:56:16,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:16,422 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-02-12 07:56:16,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-02-12 07:56:17,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-02-12 07:56:17,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-12 07:56:18,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:18,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-12 07:56:19,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:19,262 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-02-12 07:56:19,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-02-12 07:56:20,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-02-12 07:56:20,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-02-12 07:56:21,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:21,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:21,673 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:56:21,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-12 07:56:21,673 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:21,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:21,676 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:56:21,678 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:56:21,678 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:56:21,681 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:56:21,688 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-02-12 07:56:22,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-02-12 07:56:23,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-02-12 07:56:23,104 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-02-12 07:56:23,385 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:23,385 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-02-12 07:56:23,389 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-02-12 07:56:23,641 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:23,641 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-02-12 07:56:23,645 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-02-12 07:56:23,902 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:23,902 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-02-12 07:56:23,906 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-02-12 07:56:24,282 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:24,282 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-02-12 07:56:24,287 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-02-12 07:56:24,539 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:24,539 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-02-12 07:56:24,544 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-02-12 07:56:24,802 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:24,802 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-02-12 07:56:24,806 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-02-12 07:56:25,064 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-12 07:56:25,064 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-02-12 07:56:25,068 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:56:25,068 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:25,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:25,071 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-12 07:56:25,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:25,077 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-12 07:56:25,087 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-02-12 07:56:25,087 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-02-12 07:56:25,088 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:25,091 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-02-12 07:56:25,091 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-02-12 07:56:25,091 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-02-12 07:56:25,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:25,239 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-12 07:56:25,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:25,245 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-12 07:56:25,261 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-02-12 07:56:25,261 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-02-12 07:56:25,261 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-02-12 07:56:25,261 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-02-12 07:56:25,262 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:25,266 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-02-12 07:56:25,266 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-02-12 07:56:25,266 [ scc.git] DEBUG src/app/header.html | 5 + 2026-02-12 07:56:25,266 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-02-12 07:56:25,266 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-02-12 07:56:25,266 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-02-12 07:56:25,266 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-02-12 07:56:25,266 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-02-12 07:56:25,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:25,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-12 07:56:25,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:25,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-12 07:56:25,667 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-02-12 07:56:25,668 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:25,671 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-02-12 07:56:25,671 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-02-12 07:56:25,671 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-02-12 07:56:26,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:26,048 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-12 07:56:26,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:26,055 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-12 07:56:26,072 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:26,080 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-02-12 07:56:26,080 [ scc.git] DEBUG package.json | 2 +- 2026-02-12 07:56:26,080 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-02-12 07:56:26,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:26,456 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-12 07:56:26,461 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:26,463 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-12 07:56:26,498 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:56:26,498 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-12 07:56:26,498 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:56:26,499 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:56:26,502 [ scc.git] DEBUG Calling 'git reset --hard 317f9df0e2de25ab52d4d4088799f409887e94eb' 2026-02-12 07:56:26,513 [ scc.git] DEBUG HEAD is now at 317f9df merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-02-12 07:56:26,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:26,874 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-12 07:56:26,877 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-02-12 07:56:26,880 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-02-12 07:56:26,882 [ scc.config] DEBUG Found github.token 2026-02-12 07:56:26,882 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-02-12 07:56:26,882 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-12 07:56:26,886 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:26,888 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-12 07:56:26,901 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:26,905 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-02-12 07:56:26,905 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-02-12 07:56:26,905 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-02-12 07:56:26,905 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-12 07:56:27,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:27,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-12 07:56:27,281 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:27,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-12 07:56:27,295 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-12 07:56:27,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:27,299 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-02-12 07:56:27,299 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-02-12 07:56:27,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:27,702 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:56:27,740 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:27,741 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:27,743 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:56:27,780 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:56:27,783 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95122ed190> has no local changes 2026-02-12 07:56:27,783 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:56:27,790 [ scc.git] DEBUG [detached HEAD 8e18fe0] merge master -Dorg -Ssuccess-only 2026-02-12 07:56:27,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:56:27,790 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:56:28,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-02-12 07:56:28,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-02-12 07:56:29,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-02-12 07:56:29,226 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:56:29,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-12 07:56:30,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:30,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:31,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-12 07:56:31,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:31,641 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:56:32,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-02-12 07:56:32,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-12 07:56:33,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:33,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-12 07:56:34,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:34,055 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:56:34,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-02-12 07:56:35,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-02-12 07:56:35,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-12 07:56:36,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:36,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-12 07:56:37,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:37,012 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-02-12 07:56:37,012 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:56:37,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-12 07:56:37,012 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:37,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:37,015 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:56:37,017 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:56:37,017 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:56:37,020 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:56:37,022 [ scc.git] DEBUG Already up to date. 2026-02-12 07:56:37,023 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-12 07:56:37,300 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-12 07:56:37,300 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-12 07:56:37,304 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-02-12 07:56:37,558 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-12 07:56:37,558 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-02-12 07:56:37,561 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-02-12 07:56:37,817 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-12 07:56:37,817 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-02-12 07:56:37,821 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:56:37,822 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:37,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:37,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-12 07:56:37,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:37,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-12 07:56:37,837 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:37,840 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-02-12 07:56:37,840 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-02-12 07:56:37,840 [ scc.git] DEBUG requirements.txt | 2 +- 2026-02-12 07:56:37,840 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-02-12 07:56:37,840 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-02-12 07:56:37,840 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-02-12 07:56:37,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:37,991 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-12 07:56:37,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:37,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-12 07:56:38,004 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:38,006 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:56:38,006 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:56:38,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:38,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-12 07:56:38,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:38,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-12 07:56:38,395 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-12 07:56:38,395 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-02-12 07:56:38,395 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:56:38,395 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:56:38,398 [ scc.git] DEBUG Calling 'git reset --hard 0af7ee139b61a778b5304e8d134f0f332bfa99be' 2026-02-12 07:56:38,401 [ scc.git] DEBUG HEAD is now at 0af7ee1 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-02-12 07:56:38,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:38,793 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-12 07:56:38,796 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-02-12 07:56:38,798 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-02-12 07:56:38,800 [ scc.config] DEBUG Found github.token 2026-02-12 07:56:38,800 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-02-12 07:56:38,801 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:56:38,838 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:38,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:38,840 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:56:38,877 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:56:38,880 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95111bfd10> has no local changes 2026-02-12 07:56:38,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:56:38,886 [ scc.git] DEBUG [detached HEAD 53ed7f0] merge master -Dorg -Ssuccess-only 2026-02-12 07:56:38,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:56:38,886 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:56:39,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-02-12 07:56:39,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-02-12 07:56:40,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-02-12 07:56:40,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-12 07:56:41,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:41,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-12 07:56:42,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:42,125 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-12 07:56:42,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-02-12 07:56:43,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-02-12 07:56:43,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-12 07:56:44,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:44,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-12 07:56:44,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:44,981 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-12 07:56:45,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-02-12 07:56:45,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-02-12 07:56:46,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-12 07:56:46,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:47,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-12 07:56:47,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:47,841 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-12 07:56:47,841 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:56:47,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-12 07:56:47,842 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:47,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:47,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:56:47,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:56:47,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:56:47,849 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:56:47,856 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-02-12 07:56:48,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-02-12 07:56:48,649 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-02-12 07:56:48,913 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-12 07:56:48,913 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-02-12 07:56:48,917 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-02-12 07:56:49,180 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-12 07:56:49,181 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-02-12 07:56:49,185 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-02-12 07:56:49,441 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-12 07:56:49,441 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-02-12 07:56:49,445 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:56:49,445 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:49,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:49,448 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-12 07:56:49,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:49,454 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-12 07:56:49,465 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-02-12 07:56:49,465 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-02-12 07:56:49,465 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-12 07:56:49,465 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-12 07:56:49,466 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:56:49,466 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:56:49,468 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-12 07:56:49,472 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-12 07:56:49,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:49,643 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-12 07:56:49,647 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-12 07:56:49,650 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-02-12 07:56:49,652 [ scc.config] DEBUG Found github.token 2026-02-12 07:56:49,652 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-02-12 07:56:49,652 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-12 07:56:49,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:49,657 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-12 07:56:49,671 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-12 07:56:49,671 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-12 07:56:49,671 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-02-12 07:56:49,671 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:56:49,671 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:56:49,674 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-12 07:56:49,678 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-12 07:56:50,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:50,049 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-12 07:56:50,052 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-12 07:56:50,055 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-02-12 07:56:50,057 [ scc.config] DEBUG Found github.token 2026-02-12 07:56:50,057 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-02-12 07:56:50,057 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-12 07:56:50,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:50,061 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-12 07:56:50,069 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:56:50,073 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-02-12 07:56:50,073 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-02-12 07:56:50,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:56:50,460 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:56:50,498 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:56:50,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:56:50,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:56:50,537 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:56:50,540 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95123918d0> has no local changes 2026-02-12 07:56:50,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:56:50,547 [ scc.git] DEBUG [detached HEAD 3f7276b] merge master -Dorg -Ssuccess-only 2026-02-12 07:56:50,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:56:50,548 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:56:51,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-02-12 07:56:51,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-02-12 07:56:52,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-12 07:56:52,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:53,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:53,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-12 07:56:53,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:53,912 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:56:54,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-02-12 07:56:54,433 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:56:55,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-12 07:56:55,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:56,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:56,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-12 07:56:56,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:56:56,988 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-12 07:56:57,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-02-12 07:56:57,541 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:56:58,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-12 07:56:58,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:56:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:56:59,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-12 07:57:00,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:00,087 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-12 07:57:00,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-02-12 07:57:01,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-02-12 07:57:01,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-02-12 07:57:02,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-02-12 07:57:02,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-02-12 07:57:03,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-02-12 07:57:03,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-02-12 07:57:03,568 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:03,568 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-12 07:57:03,568 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:03,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:03,570 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:03,573 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:03,573 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:03,575 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:03,578 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:03,578 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-02-12 07:57:03,952 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-12 07:57:03,952 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-02-12 07:57:03,956 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-02-12 07:57:04,213 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-12 07:57:04,213 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-02-12 07:57:04,216 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-02-12 07:57:04,477 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-12 07:57:04,477 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-02-12 07:57:04,481 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:04,481 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:04,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:04,483 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-12 07:57:04,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:04,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-12 07:57:04,494 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:04,498 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-02-12 07:57:04,498 [ scc.git] DEBUG package.json | 2 +- 2026-02-12 07:57:04,498 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-02-12 07:57:04,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:04,682 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-02-12 07:57:04,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:04,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-02-12 07:57:04,696 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-12 07:57:04,696 [ scc.git] DEBUG Auto-merging package.json 2026-02-12 07:57:04,696 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:04,700 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-02-12 07:57:04,700 [ scc.git] DEBUG package.json | 2 +- 2026-02-12 07:57:04,700 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-02-12 07:57:05,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:05,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-12 07:57:05,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:05,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-12 07:57:05,100 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:05,103 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:05,103 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:05,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:05,493 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:05,530 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:05,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:05,532 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:05,568 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:05,571 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95123ac750> has no local changes 2026-02-12 07:57:05,571 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:05,577 [ scc.git] DEBUG [detached HEAD 60f7298] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:05,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:05,578 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:06,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-02-12 07:57:06,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-02-12 07:57:06,563 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:07,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-12 07:57:07,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:08,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:08,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-12 07:57:09,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:09,039 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:09,039 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:09,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-12 07:57:09,039 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:09,039 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:09,042 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:09,044 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:09,044 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:09,047 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:09,050 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:09,050 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-02-12 07:57:09,318 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-02-12 07:57:09,318 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-02-12 07:57:09,321 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:09,321 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:09,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:09,323 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-12 07:57:09,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:09,328 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-12 07:57:09,334 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:09,337 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:09,337 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:09,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:09,508 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:09,546 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:09,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:09,548 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:09,584 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:09,587 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95111c76d0> has no local changes 2026-02-12 07:57:09,587 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:09,592 [ scc.git] DEBUG [detached HEAD 09f5d8f] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:09,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:09,593 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:10,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-02-12 07:57:10,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-02-12 07:57:10,605 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:11,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-12 07:57:11,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:12,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:12,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-12 07:57:13,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:13,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-12 07:57:14,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-02-12 07:57:14,052 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:14,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-02-12 07:57:15,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-02-12 07:57:15,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-12 07:57:16,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:16,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:17,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-12 07:57:17,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:17,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-12 07:57:18,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-02-12 07:57:18,361 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-02-12 07:57:18,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-02-12 07:57:18,854 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:18,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-12 07:57:18,854 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:18,854 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:18,857 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:18,859 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:18,859 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:18,862 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:18,864 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:18,864 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-02-12 07:57:19,139 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-12 07:57:19,139 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-02-12 07:57:19,143 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-02-12 07:57:19,521 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-12 07:57:19,521 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-02-12 07:57:19,525 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:19,525 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:19,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:19,527 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-12 07:57:19,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:19,532 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-12 07:57:19,538 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:19,541 [ scc.git] DEBUG setup.py | 4 +- 2026-02-12 07:57:19,541 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-02-12 07:57:19,541 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-02-12 07:57:19,541 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-02-12 07:57:19,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:19,711 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-02-12 07:57:19,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:19,716 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-02-12 07:57:19,722 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:19,725 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:19,725 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:20,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:20,114 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:20,151 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:20,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:20,153 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:20,189 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:20,192 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95123d1890> has no local changes 2026-02-12 07:57:20,192 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:20,197 [ scc.git] DEBUG [detached HEAD 2f0d87f] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:20,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:20,198 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:20,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-02-12 07:57:21,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-02-12 07:57:21,206 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:21,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-12 07:57:22,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:22,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:23,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-12 07:57:23,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:23,615 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:24,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-02-12 07:57:24,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-02-12 07:57:25,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-12 07:57:25,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:26,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-12 07:57:26,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:26,444 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-12 07:57:26,444 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:26,444 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-12 07:57:26,445 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:26,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:26,447 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:26,450 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:26,450 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:26,452 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:26,455 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:26,455 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-12 07:57:26,854 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-12 07:57:26,854 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-12 07:57:26,857 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-12 07:57:27,113 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-12 07:57:27,113 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-12 07:57:27,116 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:27,116 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:27,116 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:27,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-12 07:57:27,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:27,123 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-12 07:57:27,131 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG Auto-merging setup.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-02-12 07:57:27,131 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:57:27,131 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:57:27,134 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-12 07:57:27,138 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-02-12 07:57:27,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:27,286 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-12 07:57:27,289 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-12 07:57:27,291 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/views.py - omero_signup/urls.py - omero_signup/signup_settings.py --conflicts 2026-02-12 07:57:27,293 [ scc.config] DEBUG Found github.token 2026-02-12 07:57:27,293 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-02-12 07:57:27,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-12 07:57:27,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:27,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-12 07:57:27,304 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:27,306 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:27,306 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:27,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:27,714 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:27,750 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:27,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:27,753 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:27,788 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:27,791 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9511233b90> has no local changes 2026-02-12 07:57:27,791 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:27,797 [ scc.git] DEBUG [detached HEAD f85fad0] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:27,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:27,797 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:28,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-02-12 07:57:28,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-02-12 07:57:29,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-02-12 07:57:29,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-02-12 07:57:30,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-12 07:57:30,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:31,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:31,344 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:31,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-12 07:57:31,345 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:31,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:31,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:31,350 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:31,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:31,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:31,359 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-02-12 07:57:31,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-02-12 07:57:32,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-02-12 07:57:33,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-02-12 07:57:33,460 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:33,460 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:33,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:33,462 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:33,501 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:33,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:33,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:33,539 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:33,543 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9511231dd0> has no local changes 2026-02-12 07:57:33,543 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:33,548 [ scc.git] DEBUG [detached HEAD 9f6c5d6] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:33,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:33,548 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:33,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-02-12 07:57:34,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-02-12 07:57:34,491 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:35,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-12 07:57:35,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:36,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:36,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-12 07:57:36,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:36,955 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:36,955 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:36,955 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-12 07:57:36,955 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:36,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:36,957 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:36,960 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:36,960 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:36,962 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:36,965 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:36,965 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-12 07:57:37,378 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-02-12 07:57:37,378 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-12 07:57:37,381 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:37,382 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:37,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:37,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-12 07:57:37,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:37,389 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-12 07:57:37,395 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:37,397 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:37,397 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:37,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:37,563 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:37,601 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:37,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:37,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:37,639 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:37,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951122dfd0> has no local changes 2026-02-12 07:57:37,642 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:37,648 [ scc.git] DEBUG [detached HEAD 4d82f20] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:37,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:37,649 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:38,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-02-12 07:57:38,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-02-12 07:57:38,614 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:39,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-12 07:57:39,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:40,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:40,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-12 07:57:41,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:41,069 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:41,069 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:41,069 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-12 07:57:41,069 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:41,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:41,071 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:41,073 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:41,074 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:41,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:41,084 [ scc.git] DEBUG Updating deab817..160d894 2026-02-12 07:57:41,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-02-12 07:57:41,856 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-12 07:57:42,123 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-02-12 07:57:42,123 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-12 07:57:42,127 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:42,127 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:42,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:42,129 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-12 07:57:42,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:42,134 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-12 07:57:42,140 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:42,142 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:42,142 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:42,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:42,289 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:42,326 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:42,326 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:42,328 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:42,363 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:42,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951124a450> has no local changes 2026-02-12 07:57:42,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:42,372 [ scc.git] DEBUG [detached HEAD ab81e99] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:42,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:42,372 [ scc.git] INFO Overriding base-branch from master to main 2026-02-12 07:57:42,372 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:42,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-02-12 07:57:43,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-02-12 07:57:43,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-02-12 07:57:44,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-12 07:57:44,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:45,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:45,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-12 07:57:46,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:46,259 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-02-12 07:57:46,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-02-12 07:57:47,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-02-12 07:57:47,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-02-12 07:57:48,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-12 07:57:48,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:49,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-12 07:57:49,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:49,577 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-12 07:57:49,577 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:49,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-12 07:57:49,577 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:49,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:49,580 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-02-12 07:57:49,582 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:49,582 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-02-12 07:57:49,585 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-02-12 07:57:49,592 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-02-12 07:57:50,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-02-12 07:57:50,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-02-12 07:57:50,829 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-02-12 07:57:51,104 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-12 07:57:51,104 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-02-12 07:57:51,107 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-02-12 07:57:51,359 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-12 07:57:51,359 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-02-12 07:57:51,363 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:51,364 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:51,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:51,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-12 07:57:51,369 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:51,371 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-12 07:57:51,378 [ scc.git] DEBUG Auto-merging README.rst 2026-02-12 07:57:51,378 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-02-12 07:57:51,378 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-02-12 07:57:51,378 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-12 07:57:51,378 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-12 07:57:51,378 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-12 07:57:51,381 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-12 07:57:51,385 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-12 07:57:51,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:51,561 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-12 07:57:51,564 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-12 07:57:51,567 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#55](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-02-12 07:57:51,569 [ scc.config] DEBUG Found github.token 2026-02-12 07:57:51,569 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-02-12 07:57:51,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-12 07:57:51,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:51,574 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-12 07:57:51,581 [ scc.git] DEBUG Auto-merging README.rst 2026-02-12 07:57:51,581 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-12 07:57:51,582 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:51,584 [ scc.git] DEBUG README.rst | 3 + 2026-02-12 07:57:51,585 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-02-12 07:57:51,585 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-02-12 07:57:51,585 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-02-12 07:57:51,585 [ scc.git] DEBUG setup.py | 5 +- 2026-02-12 07:57:51,585 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-02-12 07:57:51,585 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-02-12 07:57:51,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:51,975 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:52,013 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:52,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:52,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:52,052 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:52,055 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951127e2d0> has no local changes 2026-02-12 07:57:52,055 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:52,060 [ scc.git] DEBUG [detached HEAD 00d3ede] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:52,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:52,061 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:52,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-02-12 07:57:53,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-02-12 07:57:53,022 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:53,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-12 07:57:54,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:54,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:55,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-12 07:57:55,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:55,578 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:55,578 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:55,578 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-12 07:57:55,578 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:55,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:55,581 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:55,583 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:55,583 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:55,586 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:55,589 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:55,589 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-02-12 07:57:55,858 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-02-12 07:57:55,858 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-02-12 07:57:55,862 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:57:55,862 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:55,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:55,864 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-12 07:57:55,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:55,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-12 07:57:55,875 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:57:55,878 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:57:55,878 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:57:56,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:57:56,028 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:57:56,065 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:56,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:56,068 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:57:56,104 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:57:56,107 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9512378cd0> has no local changes 2026-02-12 07:57:56,107 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:57:56,113 [ scc.git] DEBUG [detached HEAD 090e28a] merge master -Dorg -Ssuccess-only 2026-02-12 07:57:56,113 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:57:56,113 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:57:56,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-02-12 07:57:57,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-02-12 07:57:57,230 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-12 07:57:57,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-12 07:57:58,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-12 07:57:58,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-12 07:57:59,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-12 07:57:59,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-02-12 07:57:59,910 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:57:59,910 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:57:59,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-12 07:57:59,910 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:57:59,910 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:57:59,913 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:57:59,915 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:57:59,915 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:57:59,918 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:57:59,921 [ scc.git] DEBUG Already up to date. 2026-02-12 07:57:59,921 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-02-12 07:58:00,187 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-02-12 07:58:00,187 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-02-12 07:58:00,191 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:58:00,191 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:00,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-12 07:58:00,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-12 07:58:00,204 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-12 07:58:00,206 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-12 07:58:00,206 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-12 07:58:00,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:00,378 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:58:00,414 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:00,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,417 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:58:00,453 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:58:00,456 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951127b210> has no local changes 2026-02-12 07:58:00,457 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:58:00,463 [ scc.git] DEBUG [detached HEAD 881464b] merge master -Dorg -Ssuccess-only 2026-02-12 07:58:00,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:00,463 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:58:00,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-02-12 07:58:00,832 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:58:00,832 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-12 07:58:00,832 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:00,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,835 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-12 07:58:00,837 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:58:00,837 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-12 07:58:00,839 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-12 07:58:00,842 [ scc.git] DEBUG Already up to date. 2026-02-12 07:58:00,842 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:58:00,842 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:00,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,844 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:58:00,882 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:00,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:00,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:58:00,920 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:58:00,923 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f951285f910> has no local changes 2026-02-12 07:58:00,923 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:58:00,929 [ scc.git] DEBUG [detached HEAD 900fde4] merge master -Dorg -Ssuccess-only 2026-02-12 07:58:00,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:00,929 [ scc.git] INFO Overriding base-branch from master to develop 2026-02-12 07:58:00,929 [ scc.repo] DEBUG ## PRs found: 2026-02-12 07:58:01,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-02-12 07:58:01,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-02-12 07:58:02,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-02-12 07:58:02,456 [ scc.repo] DEBUG ## Branches found: 2026-02-12 07:58:02,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-12 07:58:02,456 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:02,456 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:02,459 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-02-12 07:58:02,461 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-12 07:58:02,461 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-02-12 07:58:02,464 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-02-12 07:58:02,475 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-02-12 07:58:03,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-02-12 07:58:03,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-02-12 07:58:04,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-02-12 07:58:05,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-02-12 07:58:06,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-02-12 07:58:06,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-02-12 07:58:07,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-02-12 07:58:07,627 [ scc.git] DEBUG ## Unique users: [] 2026-02-12 07:58:07,627 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:07,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:07,630 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-12 07:58:07,669 [ scc.git] DEBUG Get sha1 of %s 2026-02-12 07:58:07,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-12 07:58:07,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:58:07,708 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:58:07,712 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9510089790> has no local changes 2026-02-12 07:58:07,712 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:58:07,718 [ scc.git] DEBUG [detached HEAD 520e381] merge master -Dorg -Ssuccess-only 2026-02-12 07:58:07,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:07,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-12 07:58:07,787 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-02-12 07:58:08,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:08,041 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-02-12 07:58:08,042 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-02-12 07:58:08,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:08,449 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-02-12 07:58:08,450 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-02-12 07:58:08,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:08,857 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-02-12 07:58:08,859 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-02-12 07:58:09,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:09,274 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-02-12 07:58:09,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:09,695 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-02-12 07:58:09,697 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-02-12 07:58:10,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:10,091 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-02-12 07:58:10,093 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-02-12 07:58:10,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:10,490 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-02-12 07:58:10,492 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-02-12 07:58:10,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:10,889 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-02-12 07:58:10,891 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-02-12 07:58:11,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:11,284 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-02-12 07:58:11,286 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-02-12 07:58:11,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:11,687 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-02-12 07:58:11,689 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-02-12 07:58:12,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:12,114 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-02-12 07:58:12,116 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-02-12 07:58:12,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:12,518 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-02-12 07:58:12,520 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-02-12 07:58:12,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:12,924 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-02-12 07:58:13,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:13,322 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-02-12 07:58:13,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:13,717 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-02-12 07:58:13,719 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-02-12 07:58:14,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:14,124 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-02-12 07:58:14,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:14,529 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-02-12 07:58:14,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:14,931 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-02-12 07:58:14,933 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-02-12 07:58:15,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:15,319 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-02-12 07:58:15,321 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-02-12 07:58:15,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:15,724 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-02-12 07:58:15,726 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-02-12 07:58:16,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:16,121 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-02-12 07:58:16,123 [ scc.config] DEBUG Found submodule.scripts.url 2026-02-12 07:58:16,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-12 07:58:16,511 [ scc.config] DEBUG Found submodule.scripts.branch 2026-02-12 07:58:16,511 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-12 07:58:16,589 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f95123ad390> has local changes 2026-02-12 07:58:16,589 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#55 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/55/)' 2026-02-12 07:58:16,601 [ scc.git] DEBUG [detached HEAD 91a9ab9] merge master -Dorg -Ssuccess-only 2026-02-12 07:58:16,601 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-02-12 07:58:16,601 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-12 07:58:16,601 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,601 [ scc.merge] INFO 2026-02-12 07:58:16,601 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,601 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-12 07:58:16,601 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-12 07:58:16,601 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-12 07:58:16,601 [ scc.merge] INFO 2026-02-12 07:58:16,601 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-02-12 07:58:16,602 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-02-12 07:58:16,602 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-02-12 07:58:16,602 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-02-12 07:58:16,602 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-02-12 07:58:16,602 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-02-12 07:58:16,602 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,602 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-02-12 07:58:16,602 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-02-12 07:58:16,602 [ scc.merge] INFO Updating 11d3587..9530c10 2026-02-12 07:58:16,602 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-02-12 07:58:16,602 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,602 [ scc.merge] INFO 2026-02-12 07:58:16,603 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-12 07:58:16,603 [ scc.merge] INFO 2026-02-12 07:58:16,603 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-12 07:58:16,603 [ scc.merge] INFO 2026-02-12 07:58:16,603 [ scc.merge] INFO Repository: ome/omero-figure 2026-02-12 07:58:16,603 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-02-12 07:58:16,603 [ scc.merge] INFO Updating 9cc36cde..e241dc01 2026-02-12 07:58:16,603 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,603 [ scc.merge] INFO 2026-02-12 07:58:16,603 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-02-12 07:58:16,603 [ scc.merge] INFO 2026-02-12 07:58:16,603 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,603 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-02-12 07:58:16,604 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Repository: ome/omero-gallery 2026-02-12 07:58:16,604 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-02-12 07:58:16,604 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-02-12 07:58:16,604 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-02-12 07:58:16,604 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,604 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,604 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-12 07:58:16,604 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Repository: ome/omero-mapr 2026-02-12 07:58:16,605 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-02-12 07:58:16,605 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Repository: ome/omero-metadata 2026-02-12 07:58:16,605 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-02-12 07:58:16,605 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Repository: ome/omero-parade 2026-02-12 07:58:16,605 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-02-12 07:58:16,605 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-02-12 07:58:16,605 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,605 [ scc.merge] INFO Repository: ome/omero-rois 2026-02-12 07:58:16,605 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,605 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-12 07:58:16,605 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,605 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Repository: ome/omero-signup 2026-02-12 07:58:16,606 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-02-12 07:58:16,606 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure) 2026-02-12 07:58:16,606 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-02-12 07:58:16,606 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Repository: ome/omero-upload 2026-02-12 07:58:16,606 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-02-12 07:58:16,606 [ scc.merge] INFO Updating deab817..160d894 2026-02-12 07:58:16,606 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-02-12 07:58:16,606 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-02-12 07:58:16,606 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-02-12 07:58:16,606 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-02-12 07:58:16,606 [ scc.merge] INFO 2026-02-12 07:58:16,606 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,606 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-02-12 07:58:16,607 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-02-12 07:58:16,607 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Merged PRs: 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-02-12 07:58:16,607 [ scc.merge] INFO Already up to date. 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO Repository: ome/scripts 2026-02-12 07:58:16,607 [ scc.merge] INFO Excluded PRs: 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-02-12 07:58:16,607 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-02-12 07:58:16,607 [ scc.merge] INFO Previously merged: 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-02-12 07:58:16,607 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] INFO 2026-02-12 07:58:16,607 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-12 07:58:16,607 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,609 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-12 07:58:16,609 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-12 07:58:16,612 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,614 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-12 07:58:16,614 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,616 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-12 07:58:16,616 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-12 07:58:16,618 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-12 07:58:16,620 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,622 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-12 07:58:16,622 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,624 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-12 07:58:16,624 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-12 07:58:16,626 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-12 07:58:16,628 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-12 07:58:16,631 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,633 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-12 07:58:16,633 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-12 07:58:16,635 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-12 07:58:16,637 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-12 07:58:16,639 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-12 07:58:16,641 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-12 07:58:16,643 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-12 07:58:16,645 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-12 07:58:16,647 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,649 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,650 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-12 07:58:16,650 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-12 07:58:16,652 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-12 07:58:16,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-12 07:58:16,654 [ scc.git] DEBUG Calling 'git remote' 2026-02-12 07:58:16,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 9d51aa5] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD c8f9abc] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-12 07:59:03,970 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-12 07:59:13,635 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-12 07:59:16,120 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-12 07:59:20,915 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-12 08:00:02,375 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS