Started by upstream project "Trigger" build number 85 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 61 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-cli-zarr # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.1.4-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.1.4-py3-none-any.whl (152 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.1.4 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-02-23 00:43:28,127 [ scc.config] DEBUG Found github.token 2026-02-23 00:43:28,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-23 00:43:28,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:28,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:29,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-23 00:43:29,133 [ scc.gh] DEBUG 3956 remaining from 5000 (Reset at 00:02 2026-02-23 00:43:29,133 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:29,136 [ scc.git] DEBUG Check current status 2026-02-23 00:43:29,136 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:29,138 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-23 00:43:29,138 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:29,185 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-23 00:43:29,188 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-23 00:43:29,191 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-23 00:43:29,194 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-23 00:43:29,198 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-23 00:43:29,200 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-23 00:43:29,203 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-23 00:43:29,206 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-23 00:43:29,209 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-23 00:43:29,212 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-23 00:43:29,215 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-23 00:43:29,217 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-23 00:43:29,220 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-23 00:43:29,223 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-23 00:43:29,226 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-23 00:43:29,229 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-23 00:43:29,231 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-23 00:43:29,234 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-23 00:43:29,237 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-23 00:43:29,239 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-23 00:43:29,242 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-23 00:43:29,245 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-23 00:43:29,248 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:29,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-23 00:43:30,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:30,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:30,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:31,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:31,346 [ scc.git] DEBUG Resetting... 2026-02-23 00:43:31,346 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-23 00:43:31,353 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-23 00:43:31,354 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-23 00:43:31,453 [ scc.git] DEBUG Check current status 2026-02-23 00:43:31,453 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:31,456 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-02-23 00:43:31,456 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:31,500 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-23 00:43:31,503 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-23 00:43:31,506 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-23 00:43:31,509 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-23 00:43:31,512 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-02-23 00:43:31,515 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-23 00:43:31,517 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-23 00:43:31,520 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-02-23 00:43:31,523 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-23 00:43:31,526 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-23 00:43:31,528 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-23 00:43:31,531 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-23 00:43:31,534 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-23 00:43:31,536 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-23 00:43:31,539 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-23 00:43:31,542 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-23 00:43:31,545 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-23 00:43:31,547 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-23 00:43:31,549 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-23 00:43:31,552 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-23 00:43:31,555 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-23 00:43:31,558 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-02-23 00:43:31,559 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-23 00:43:31,559 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-23 00:43:31,559 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-23 00:43:31,559 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-23 00:43:31,559 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-23 00:43:31,559 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:43:31,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-23 00:43:32,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-23 00:43:32,361 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:43:32,361 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-23 00:43:32,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-23 00:43:32,892 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:43:32,892 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-23 00:43:33,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-23 00:43:33,413 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:43:33,413 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-23 00:43:33,413 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:43:33,413 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:43:33,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:33,416 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:43:33,418 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:43:33,418 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:43:33,421 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:43:33,424 [ scc.git] DEBUG Already up to date. 2026-02-23 00:43:33,424 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-23 00:43:33,825 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:43:33,825 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-23 00:43:33,829 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-23 00:43:34,082 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:43:34,082 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-23 00:43:34,086 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-23 00:43:34,452 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:43:34,452 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-23 00:43:34,459 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:43:34,460 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:43:34,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:34,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-23 00:43:34,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:34,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-23 00:43:34,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:43:34,484 [ scc.git] DEBUG scripts | 2 +- 2026-02-23 00:43:34,484 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:43:34,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:34,621 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-23 00:43:34,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:34,626 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-23 00:43:34,644 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:43:34,647 [ scc.git] DEBUG omero-figure | 2 +- 2026-02-23 00:43:34,647 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:43:35,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:35,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-23 00:43:35,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:35,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-23 00:43:35,040 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:43:35,043 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-02-23 00:43:35,043 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:43:35,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:35,412 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:43:35,472 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-23 00:43:35,495 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-23 00:43:35,508 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-23 00:43:35,509 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:43:35,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:43:35,511 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:43:35,589 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4121d63b90> has no local changes 2026-02-23 00:43:35,589 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:43:35,659 [ scc.git] DEBUG [detached HEAD c5a256c] merge master -Dorg -Snone 2026-02-23 00:43:35,659 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-23 00:43:35,659 [ scc.merge] INFO Already up to date. 2026-02-23 00:43:35,659 [ scc.merge] INFO 2026-02-23 00:43:35,659 [ scc.merge] INFO Merged PRs: 2026-02-23 00:43:35,659 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-23 00:43:35,659 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-23 00:43:35,659 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-23 00:43:35,659 [ scc.merge] INFO 2026-02-23 00:43:35,659 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-23 00:43:35,659 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9530c10ba9823fcba6b39139987bf4bcd4a60179' Submodule path 'omero-figure': checked out 'e241dc01b21d8800b6e34e087cbf7099046f68e6' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-02-23 00:43:43,731 [ scc.config] DEBUG Found github.token 2026-02-23 00:43:43,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-02-23 00:43:43,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:44,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:43:44,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-02-23 00:43:44,715 [ scc.gh] DEBUG 3942 remaining from 5000 (Reset at 00:02 2026-02-23 00:43:44,715 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:44,718 [ scc.git] DEBUG Check current status 2026-02-23 00:43:44,718 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:44,720 [ scc.git] DEBUG c5a256c merge master -Dorg -Snone 2026-02-23 00:43:44,720 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:44,767 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-23 00:43:44,769 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-23 00:43:44,772 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-02-23 00:43:44,776 [ scc.git] DEBUG +9530c10ba9823fcba6b39139987bf4bcd4a60179 omero-cli-zarr (v0.7.0rc1-16-g9530c10) 2026-02-23 00:43:44,786 [ scc.git] DEBUG +e241dc01b21d8800b6e34e087cbf7099046f68e6 omero-figure (v7.3.1-36-ge241dc01) 2026-02-23 00:43:44,788 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-23 00:43:44,791 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-23 00:43:44,795 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-02-23 00:43:44,797 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-23 00:43:44,800 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-02-23 00:43:44,803 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-23 00:43:44,806 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-23 00:43:44,809 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-23 00:43:44,812 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-23 00:43:44,815 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-02-23 00:43:44,818 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-23 00:43:44,820 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-02-23 00:43:44,823 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-02-23 00:43:44,826 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-23 00:43:44,828 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-23 00:43:44,831 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-23 00:43:44,834 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-02-23 00:43:44,837 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:44,837 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-02-23 00:43:44,839 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-02-23 00:43:45,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-02-23 00:43:45,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:46,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:46,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:46,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:46,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:47,026 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-23 00:43:47,026 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:47,028 [ scc.git] DEBUG Check current status 2026-02-23 00:43:47,029 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:47,031 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-02-23 00:43:47,031 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:47,073 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:47,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-02-23 00:43:47,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:48,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:48,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:49,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:49,199 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:49,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:43:49,237 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-23 00:43:49,237 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:49,239 [ scc.git] DEBUG Check current status 2026-02-23 00:43:49,239 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:49,241 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-02-23 00:43:49,241 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:49,279 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:49,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-02-23 00:43:50,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:50,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:51,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:51,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:51,514 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:51,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:43:51,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-23 00:43:51,552 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:51,554 [ scc.git] DEBUG Check current status 2026-02-23 00:43:51,554 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:51,557 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-02-23 00:43:51,557 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:51,599 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:52,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-02-23 00:43:52,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:52,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:53,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:53,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:53,727 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:53,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:43:53,765 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-23 00:43:53,765 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:53,767 [ scc.git] DEBUG Check current status 2026-02-23 00:43:53,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:53,770 [ scc.git] DEBUG 9530c10 Merge pull request #192 from jburel/pixels_size 2026-02-23 00:43:53,770 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:53,808 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:54,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-02-23 00:43:54,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:55,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:55,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:56,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:56,060 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:56,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:43:56,098 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-23 00:43:56,098 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:56,100 [ scc.git] DEBUG Check current status 2026-02-23 00:43:56,100 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:56,103 [ scc.git] DEBUG e241dc01 Merge pull request #648 from kaabl/PR543-resurrect 2026-02-23 00:43:56,103 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:56,140 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:56,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-02-23 00:43:57,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:57,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:43:57,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:43:58,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:43:58,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:43:58,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:43:58,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-23 00:43:58,349 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:43:58,351 [ scc.git] DEBUG Check current status 2026-02-23 00:43:58,352 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:43:58,354 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-02-23 00:43:58,354 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:43:58,394 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:43:58,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-02-23 00:43:59,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:43:59,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:00,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:00,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:00,736 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:00,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:00,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-23 00:44:00,774 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:00,776 [ scc.git] DEBUG Check current status 2026-02-23 00:44:00,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:00,778 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-02-23 00:44:00,779 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:00,816 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:01,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-02-23 00:44:01,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:02,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:02,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:03,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:03,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:03,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:03,373 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-23 00:44:03,373 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:03,375 [ scc.git] DEBUG Check current status 2026-02-23 00:44:03,375 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:03,377 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-02-23 00:44:03,377 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:03,415 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:03,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-02-23 00:44:04,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:04,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:05,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:05,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:05,640 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:05,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:05,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-23 00:44:05,680 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:05,682 [ scc.git] DEBUG Check current status 2026-02-23 00:44:05,682 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:05,684 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-02-23 00:44:05,684 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:05,725 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:06,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-02-23 00:44:06,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:07,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:07,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:07,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:07,883 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:07,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:07,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-23 00:44:07,921 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:07,923 [ scc.git] DEBUG Check current status 2026-02-23 00:44:07,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:07,925 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-23 00:44:07,926 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:07,963 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:08,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-02-23 00:44:09,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:09,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:09,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:10,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:10,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:10,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:10,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-23 00:44:10,349 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:10,351 [ scc.git] DEBUG Check current status 2026-02-23 00:44:10,351 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:10,354 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-02-23 00:44:10,354 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:10,392 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:10,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-02-23 00:44:11,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:11,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:12,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:12,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:12,551 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:12,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:12,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-23 00:44:12,589 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:12,591 [ scc.git] DEBUG Check current status 2026-02-23 00:44:12,591 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:12,594 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-02-23 00:44:12,594 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:12,631 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:13,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-02-23 00:44:13,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:14,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:14,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:14,801 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:14,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:14,840 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-23 00:44:14,840 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:14,842 [ scc.git] DEBUG Check current status 2026-02-23 00:44:14,842 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:14,844 [ scc.git] DEBUG bdfeb5e bump sphinx version 2026-02-23 00:44:14,844 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:14,882 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:15,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-02-23 00:44:15,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:16,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:16,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:17,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:17,051 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:17,088 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:17,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-23 00:44:17,089 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:17,091 [ scc.git] DEBUG Check current status 2026-02-23 00:44:17,091 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:17,093 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-02-23 00:44:17,093 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:17,132 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:17,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-02-23 00:44:18,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:18,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:18,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:19,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:19,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:19,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:19,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-23 00:44:19,300 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:19,302 [ scc.git] DEBUG Check current status 2026-02-23 00:44:19,302 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:19,304 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-02-23 00:44:19,305 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:19,342 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:19,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-23 00:44:19,673 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-23 00:44:19,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-02-23 00:44:20,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:20,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:21,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:21,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:21,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:21,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:21,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-23 00:44:21,803 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:21,805 [ scc.git] DEBUG Check current status 2026-02-23 00:44:21,805 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:21,808 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-02-23 00:44:21,808 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:21,845 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:22,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-02-23 00:44:22,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:23,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:23,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:24,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:24,010 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:24,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:24,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-23 00:44:24,048 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:24,050 [ scc.git] DEBUG Check current status 2026-02-23 00:44:24,050 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:24,052 [ scc.git] DEBUG 160d894 Fix display of code 2026-02-23 00:44:24,052 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:24,090 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:24,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-02-23 00:44:24,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:25,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:25,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:26,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:26,265 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:26,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:26,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-23 00:44:26,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:26,307 [ scc.git] DEBUG Check current status 2026-02-23 00:44:26,307 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:26,309 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-23 00:44:26,309 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:26,349 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:26,349 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-02-23 00:44:26,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-02-23 00:44:27,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:27,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:28,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:28,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:28,498 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:28,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:28,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-23 00:44:28,535 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:28,537 [ scc.git] DEBUG Check current status 2026-02-23 00:44:28,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:28,539 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-02-23 00:44:28,540 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:28,578 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:28,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-23 00:44:28,920 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-23 00:44:29,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-02-23 00:44:29,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:30,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:30,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:30,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:30,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:30,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:30,949 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-23 00:44:30,949 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:30,951 [ scc.git] DEBUG Check current status 2026-02-23 00:44:30,951 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:30,953 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-02-23 00:44:30,954 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:30,991 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:31,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-23 00:44:31,342 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-23 00:44:31,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-02-23 00:44:32,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:32,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:32,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:33,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:33,402 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:33,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:33,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-23 00:44:33,440 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:33,442 [ scc.git] DEBUG Check current status 2026-02-23 00:44:33,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:33,444 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-02-23 00:44:33,445 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:33,482 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:33,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-02-23 00:44:34,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:34,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:35,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:35,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:35,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:35,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:35,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-23 00:44:35,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-02-23 00:44:35,692 [ scc.git] DEBUG Check current status 2026-02-23 00:44:35,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:35,694 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-02-23 00:44:35,694 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:35,735 [ scc.config] DEBUG Found remote.origin.url 2026-02-23 00:44:35,735 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-02-23 00:44:36,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-23 00:44:36,064 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-23 00:44:36,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-02-23 00:44:36,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-02-23 00:44:37,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-02-23 00:44:37,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-02-23 00:44:38,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-02-23 00:44:38,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:38,096 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:38,096 [ scc.git] DEBUG Resetting... 2026-02-23 00:44:38,096 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-02-23 00:44:38,103 [ scc.git] DEBUG HEAD is now at c5a256c merge master -Dorg -Snone 2026-02-23 00:44:38,104 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-02-23 00:44:38,154 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-02-23 00:44:38,170 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-02-23 00:44:38,200 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-02-23 00:44:38,219 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-02-23 00:44:38,233 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-02-23 00:44:38,254 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-02-23 00:44:38,268 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-02-23 00:44:38,278 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-02-23 00:44:38,303 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-02-23 00:44:38,305 [ scc.git] DEBUG Check current status 2026-02-23 00:44:38,305 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-02-23 00:44:38,308 [ scc.git] DEBUG c5a256c merge master -Dorg -Snone 2026-02-23 00:44:38,308 [ scc.git] DEBUG Calling 'git submodule status' 2026-02-23 00:44:38,351 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-02-23 00:44:38,354 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-02-23 00:44:38,357 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-02-23 00:44:38,360 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-02-23 00:44:38,364 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-02-23 00:44:38,366 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-02-23 00:44:38,369 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-02-23 00:44:38,372 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-02-23 00:44:38,375 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-02-23 00:44:38,378 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-02-23 00:44:38,380 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-02-23 00:44:38,383 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-02-23 00:44:38,386 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-02-23 00:44:38,389 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-02-23 00:44:38,392 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-02-23 00:44:38,394 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-02-23 00:44:38,397 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-02-23 00:44:38,399 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-02-23 00:44:38,402 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-02-23 00:44:38,404 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-02-23 00:44:38,407 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-02-23 00:44:38,411 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-02-23 00:44:38,411 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-02-23 00:44:38,411 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-02-23 00:44:38,411 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-02-23 00:44:38,411 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-02-23 00:44:38,411 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-02-23 00:44:38,411 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-02-23 00:44:38,412 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:44:38,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-02-23 00:44:39,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-02-23 00:44:39,333 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:44:39,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-23 00:44:40,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:44:40,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-02-23 00:44:41,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:44:41,388 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-23 00:44:41,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-02-23 00:44:41,912 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:44:42,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-23 00:44:42,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:44:43,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-02-23 00:44:43,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:44:43,915 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-23 00:44:44,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-02-23 00:44:44,451 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:44:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-23 00:44:45,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:44:45,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-02-23 00:44:46,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:44:46,393 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-23 00:44:46,393 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:44:46,393 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:46,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:46,396 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:44:46,398 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:44:46,398 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:44:46,401 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:44:46,403 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:46,403 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-02-23 00:44:46,688 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:44:46,688 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-02-23 00:44:46,693 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-02-23 00:44:46,948 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:44:46,948 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-02-23 00:44:46,952 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-02-23 00:44:47,429 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-02-23 00:44:47,430 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-02-23 00:44:47,434 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:44:47,434 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:47,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:47,437 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-23 00:44:47,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:47,441 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-02-23 00:44:47,444 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:47,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:44:47,589 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-23 00:44:47,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:47,594 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-02-23 00:44:47,596 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:47,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:44:47,992 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-23 00:44:47,995 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:47,997 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-02-23 00:44:47,999 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:48,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:44:48,392 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:44:48,441 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:48,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:48,444 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:44:48,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-02-23 00:44:48,807 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:44:48,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-23 00:44:48,807 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:48,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:48,810 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:44:48,812 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:44:48,812 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:44:48,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:44:48,818 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:48,818 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:44:48,818 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:48,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:48,820 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:44:48,858 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:48,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:48,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:48,897 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:44:48,900 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff1162cb050> has no local changes 2026-02-23 00:44:48,900 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:44:48,906 [ scc.git] DEBUG [detached HEAD 1d5082a] merge master -Dorg -Ssuccess-only 2026-02-23 00:44:48,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:48,906 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:44:49,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-02-23 00:44:49,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-02-23 00:44:49,908 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:44:50,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-23 00:44:51,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:44:51,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:44:52,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-02-23 00:44:52,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:44:52,445 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:44:53,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-02-23 00:44:53,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-02-23 00:44:53,503 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:44:53,503 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-23 00:44:53,504 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:53,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:53,506 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:44:53,508 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:44:53,508 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:44:53,511 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:44:53,514 [ scc.git] DEBUG Already up to date. 2026-02-23 00:44:53,514 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-02-23 00:44:53,913 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-02-23 00:44:53,913 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-02-23 00:44:53,918 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:44:53,918 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:53,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:53,920 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-23 00:44:53,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:53,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-02-23 00:44:53,931 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:44:53,934 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:44:53,934 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:44:54,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:44:54,093 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:44:54,130 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:54,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:54,132 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:44:54,169 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:44:54,172 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113bcb7d0> has no local changes 2026-02-23 00:44:54,172 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:44:54,178 [ scc.git] DEBUG [detached HEAD 7150a26] merge master -Dorg -Ssuccess-only 2026-02-23 00:44:54,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:44:54,178 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:44:54,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-02-23 00:44:55,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-02-23 00:44:55,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-02-23 00:44:56,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-23 00:44:56,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:44:57,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:44:57,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-02-23 00:44:58,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:44:58,007 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-02-23 00:44:58,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-02-23 00:44:58,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-02-23 00:44:58,962 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:44:58,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-23 00:44:58,962 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:44:58,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:44:58,965 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:44:58,967 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:44:58,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:44:58,970 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:44:58,978 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-02-23 00:44:59,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-02-23 00:45:00,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-02-23 00:45:01,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-02-23 00:45:01,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-02-23 00:45:01,929 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-02-23 00:45:02,360 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-02-23 00:45:02,361 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-02-23 00:45:02,364 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:45:02,365 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:45:02,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:02,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-23 00:45:02,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:02,373 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-02-23 00:45:02,381 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-02-23 00:45:02,381 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:45:02,385 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-02-23 00:45:02,385 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-02-23 00:45:02,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:45:02,536 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:45:02,573 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:45:02,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:02,575 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:45:02,611 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:45:02,614 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113b44b50> has no local changes 2026-02-23 00:45:02,614 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:45:02,620 [ scc.git] DEBUG [detached HEAD 8d97504] merge master -Dorg -Ssuccess-only 2026-02-23 00:45:02,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:45:02,620 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:45:03,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-02-23 00:45:03,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-02-23 00:45:04,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-02-23 00:45:04,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-23 00:45:05,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:05,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:06,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-23 00:45:06,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:07,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-02-23 00:45:07,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-02-23 00:45:07,581 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-23 00:45:08,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-02-23 00:45:08,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-02-23 00:45:09,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-02-23 00:45:09,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-02-23 00:45:10,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-23 00:45:10,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:11,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:11,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-23 00:45:11,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:12,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-02-23 00:45:13,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-02-23 00:45:13,332 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-23 00:45:13,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-02-23 00:45:14,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-02-23 00:45:14,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-23 00:45:15,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:16,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:16,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-23 00:45:16,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:17,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-02-23 00:45:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-02-23 00:45:17,820 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-02-23 00:45:18,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172 HTTP/1.1" 200 None 2026-02-23 00:45:18,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/172/comments HTTP/1.1" 200 None 2026-02-23 00:45:19,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None 2026-02-23 00:45:19,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:20,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:20,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None 2026-02-23 00:45:21,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/26693cecf3a9c915bc5f8e23d7a637769f1945a2?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:21,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2 HTTP/1.1" 200 None 2026-02-23 00:45:22,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/26693cecf3a9c915bc5f8e23d7a637769f1945a2/status HTTP/1.1" 200 None 2026-02-23 00:45:22,129 [ scc.repo] DEBUG - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-23 00:45:22,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-02-23 00:45:23,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-02-23 00:45:23,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-02-23 00:45:24,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-02-23 00:45:24,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-02-23 00:45:25,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-02-23 00:45:25,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-02-23 00:45:25,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-02-23 00:45:25,985 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:45:25,985 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-23 00:45:25,985 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:45:25,985 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:25,988 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:45:25,990 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:45:25,990 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:45:25,993 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:45:26,005 [ scc.git] DEBUG Updating 11d3587..9530c10 2026-02-23 00:45:26,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-02-23 00:45:27,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-02-23 00:45:28,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-02-23 00:45:28,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-02-23 00:45:29,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-02-23 00:45:30,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-02-23 00:45:31,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-02-23 00:45:31,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-02-23 00:45:32,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-02-23 00:45:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-02-23 00:45:33,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-02-23 00:45:33,882 [ scc.git] DEBUG Calling 'git fetch origin pull/172/head' 2026-02-23 00:45:34,158 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-23 00:45:34,158 [ scc.git] DEBUG * branch refs/pull/172/head -> FETCH_HEAD 2026-02-23 00:45:34,162 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-02-23 00:45:34,432 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-23 00:45:34,433 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-02-23 00:45:34,437 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-02-23 00:45:34,692 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-23 00:45:34,692 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-02-23 00:45:34,696 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-02-23 00:45:34,953 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-02-23 00:45:34,953 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-02-23 00:45:34,957 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:45:34,957 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:45:34,957 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:34,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...26693cecf3a9c915bc5f8e23d7a637769f1945a2' 2026-02-23 00:45:34,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:34,965 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 26693cecf3a9c915bc5f8e23d7a637769f1945a2' 2026-02-23 00:45:34,974 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:45:34,978 [ scc.git] DEBUG .isort.cfg | 2 +- 2026-02-23 00:45:34,978 [ scc.git] DEBUG .pre-commit-config.yaml | 23 +------ 2026-02-23 00:45:34,978 [ scc.git] DEBUG README.rst | 5 +- 2026-02-23 00:45:34,979 [ scc.git] DEBUG setup.py | 5 +- 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/__init__.py | 4 -- 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/cli.py | 18 +++++- 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/masks.py | 35 +++++------ 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 104 ++++++++++++++++++++---------- 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/util.py | 13 ++-- 2026-02-23 00:45:34,979 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 61 +++++++----------- 2026-02-23 00:45:34,979 [ scc.git] DEBUG test/integration/clitest/test_export.py | 108 +++++++++++++++++++++++++++----- 2026-02-23 00:45:34,979 [ scc.git] DEBUG test/integration/clitest/test_import.py | 9 +++ 2026-02-23 00:45:34,980 [ scc.git] DEBUG 12 files changed, 245 insertions(+), 142 deletions(-) 2026-02-23 00:45:35,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:45:35,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-23 00:45:35,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:35,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging README.rst 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-23 00:45:35,153 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:45:35,153 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:45:35,156 [ scc.git] DEBUG Calling 'git reset --hard fc4c142503488ef41929eb0a95907966843facdd' 2026-02-23 00:45:35,160 [ scc.git] DEBUG HEAD is now at fc4c142 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-23 00:45:35,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:45:35,530 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-02-23 00:45:35,533 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-23 00:45:35,536 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py - src/omero_zarr/util.py - test/integration/clitest/test_export.py --conflicts 2026-02-23 00:45:35,537 [ scc.config] DEBUG Found github.token 2026-02-23 00:45:35,538 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-02-23 00:45:35,538 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-23 00:45:35,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:35,543 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-23 00:45:35,552 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-02-23 00:45:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-02-23 00:45:35,552 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-02-23 00:45:35,552 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-02-23 00:45:35,552 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:45:35,553 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:45:35,555 [ scc.git] DEBUG Calling 'git reset --hard fc4c142503488ef41929eb0a95907966843facdd' 2026-02-23 00:45:35,559 [ scc.git] DEBUG HEAD is now at fc4c142 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-23 00:45:35,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:45:35,914 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-02-23 00:45:35,917 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-23 00:45:35,920 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-02-23 00:45:35,921 [ scc.config] DEBUG Found github.token 2026-02-23 00:45:35,922 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-02-23 00:45:35,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-23 00:45:35,925 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:35,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-23 00:45:35,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-02-23 00:45:35,938 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-02-23 00:45:35,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-02-23 00:45:35,938 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-02-23 00:45:35,938 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-02-23 00:45:35,938 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:45:35,938 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:45:35,941 [ scc.git] DEBUG Calling 'git reset --hard fc4c142503488ef41929eb0a95907966843facdd' 2026-02-23 00:45:35,946 [ scc.git] DEBUG HEAD is now at fc4c142 merge master -Dorg -Ssuccess-only: PR 172 (Use zarr v3 and updated ome-zarr-py) 2026-02-23 00:45:36,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:45:36,495 [ scc.git] DEBUG Calling 'git merge-base 9530c10ba9823fcba6b39139987bf4bcd4a60179 cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-02-23 00:45:36,499 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9530c10ba9823fcba6b39139987bf4bcd4a60179' 2026-02-23 00:45:36,502 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #172 will-moore 'Use zarr v3 and updated ome-zarr-py' - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-02-23 00:45:36,504 [ scc.config] DEBUG Found github.token 2026-02-23 00:45:36,504 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-02-23 00:45:36,504 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:45:36,541 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:45:36,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:45:36,543 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:45:36,579 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:45:36,582 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113bcf9d0> has no local changes 2026-02-23 00:45:36,582 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:45:36,588 [ scc.git] DEBUG [detached HEAD d9dc288] merge master -Dorg -Ssuccess-only 2026-02-23 00:45:36,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:45:36,588 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:45:37,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-02-23 00:45:37,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667 HTTP/1.1" 200 None 2026-02-23 00:45:38,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667/comments HTTP/1.1" 200 None 2026-02-23 00:45:38,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None 2026-02-23 00:45:39,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:39,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:40,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/317160c08a2bdc467f7867954ec7b633d4e8f5cd HTTP/1.1" 200 None 2026-02-23 00:45:40,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/317160c08a2bdc467f7867954ec7b633d4e8f5cd?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:40,518 [ scc.repo] DEBUG - PR 667 Tom-TBT 'Label suggestion interface' 2026-02-23 00:45:40,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-02-23 00:45:41,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None 2026-02-23 00:45:42,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:42,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:42,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a HTTP/1.1" 200 None 2026-02-23 00:45:43,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/c495cf373b4f9a6ab9eb2c1ba903635ff62b947a?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:43,371 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-02-23 00:45:43,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665 HTTP/1.1" 200 None 2026-02-23 00:45:44,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/665/comments HTTP/1.1" 200 None 2026-02-23 00:45:45,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-23 00:45:45,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:46,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:46,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/bdf45b550f4528d17eba292491bbb620ad49022b HTTP/1.1" 200 None 2026-02-23 00:45:46,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/bdf45b550f4528d17eba292491bbb620ad49022b?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:46,942 [ scc.repo] DEBUG - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-23 00:45:47,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664 HTTP/1.1" 200 None 2026-02-23 00:45:47,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/664/comments HTTP/1.1" 200 None 2026-02-23 00:45:47,957 [ scc.repo] DEBUG # ... Include label: include 2026-02-23 00:45:48,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-23 00:45:48,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:49,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:49,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ef2d52de60235379f42877477aa2088551610bea HTTP/1.1" 200 None 2026-02-23 00:45:50,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ef2d52de60235379f42877477aa2088551610bea?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:50,308 [ scc.repo] DEBUG - PR 664 Nirkan 'Handle many channels ' 2026-02-23 00:45:50,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-02-23 00:45:51,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-02-23 00:45:51,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None 2026-02-23 00:45:52,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:52,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:53,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/03062bc197e09e7cfcefd73bd86fdb8530cfa819 HTTP/1.1" 200 None 2026-02-23 00:45:53,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/03062bc197e09e7cfcefd73bd86fdb8530cfa819?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:53,709 [ scc.repo] DEBUG - PR 663 will-moore 'Zarr' 2026-02-23 00:45:54,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-02-23 00:45:54,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-02-23 00:45:55,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-23 00:45:55,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:56,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:56,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/21baa4e8ba004395bd7a27d520edaa2ed4a540ac HTTP/1.1" 200 None 2026-02-23 00:45:57,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/21baa4e8ba004395bd7a27d520edaa2ed4a540ac?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:45:57,027 [ scc.repo] DEBUG - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-23 00:45:57,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656 HTTP/1.1" 200 None 2026-02-23 00:45:57,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/656/comments HTTP/1.1" 200 None 2026-02-23 00:45:58,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None 2026-02-23 00:45:58,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:45:59,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:45:59,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/b6cb152f9484c3a0886812ad5c791c580ee456f6 HTTP/1.1" 200 None 2026-02-23 00:46:00,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/b6cb152f9484c3a0886812ad5c791c580ee456f6?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:00,390 [ scc.repo] DEBUG - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-23 00:46:00,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654 HTTP/1.1" 200 None 2026-02-23 00:46:01,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/654/comments HTTP/1.1" 200 None 2026-02-23 00:46:01,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a HTTP/1.1" 200 None 2026-02-23 00:46:02,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:02,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:46:03,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/62611404a96e14b1db4c58ae3d36ab7d725bd68a HTTP/1.1" 200 None 2026-02-23 00:46:03,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/62611404a96e14b1db4c58ae3d36ab7d725bd68a?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:03,760 [ scc.repo] DEBUG - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-23 00:46:04,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-02-23 00:46:04,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-02-23 00:46:04,737 [ scc.repo] DEBUG # ... Include label: include 2026-02-23 00:46:05,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-23 00:46:05,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:06,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:46:06,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-02-23 00:46:07,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:07,195 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-23 00:46:07,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-02-23 00:46:08,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-02-23 00:46:08,184 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:46:08,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-23 00:46:08,184 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:08,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:08,187 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:46:08,190 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:46:08,190 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:46:08,194 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:46:08,231 [ scc.git] DEBUG Updating 9cc36cde..e241dc01 2026-02-23 00:46:08,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-02-23 00:46:09,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-02-23 00:46:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-02-23 00:46:11,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-02-23 00:46:12,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-02-23 00:46:12,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-02-23 00:46:13,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-02-23 00:46:14,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-02-23 00:46:15,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-02-23 00:46:15,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-02-23 00:46:16,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-02-23 00:46:17,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-02-23 00:46:17,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-02-23 00:46:18,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-02-23 00:46:19,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-02-23 00:46:20,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-02-23 00:46:20,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-02-23 00:46:21,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-02-23 00:46:22,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-02-23 00:46:22,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-02-23 00:46:23,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-02-23 00:46:24,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-02-23 00:46:24,270 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-02-23 00:46:24,714 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:24,714 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-02-23 00:46:24,719 [ scc.git] DEBUG Calling 'git fetch origin pull/654/head' 2026-02-23 00:46:25,082 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:25,082 [ scc.git] DEBUG * branch refs/pull/654/head -> FETCH_HEAD 2026-02-23 00:46:25,086 [ scc.git] DEBUG Calling 'git fetch origin pull/656/head' 2026-02-23 00:46:25,341 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:25,341 [ scc.git] DEBUG * branch refs/pull/656/head -> FETCH_HEAD 2026-02-23 00:46:25,345 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-02-23 00:46:25,603 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:25,603 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-02-23 00:46:25,607 [ scc.git] DEBUG Calling 'git fetch origin pull/663/head' 2026-02-23 00:46:25,867 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:25,867 [ scc.git] DEBUG * branch refs/pull/663/head -> FETCH_HEAD 2026-02-23 00:46:25,872 [ scc.git] DEBUG Calling 'git fetch origin pull/664/head' 2026-02-23 00:46:26,314 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:26,314 [ scc.git] DEBUG * branch refs/pull/664/head -> FETCH_HEAD 2026-02-23 00:46:26,319 [ scc.git] DEBUG Calling 'git fetch origin pull/665/head' 2026-02-23 00:46:26,688 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:26,688 [ scc.git] DEBUG * branch refs/pull/665/head -> FETCH_HEAD 2026-02-23 00:46:26,692 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-02-23 00:46:26,957 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:26,957 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-02-23 00:46:26,961 [ scc.git] DEBUG Calling 'git fetch origin pull/667/head' 2026-02-23 00:46:27,305 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-02-23 00:46:27,305 [ scc.git] DEBUG * branch refs/pull/667/head -> FETCH_HEAD 2026-02-23 00:46:27,309 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:46:27,309 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:27,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:27,312 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-23 00:46:27,319 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:27,321 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-02-23 00:46:27,346 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-23 00:46:27,346 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-23 00:46:27,346 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-23 00:46:27,347 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:27,352 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-02-23 00:46:27,352 [ scc.git] DEBUG src/index.html | 11 ++ 2026-02-23 00:46:27,352 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-02-23 00:46:27,352 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-02-23 00:46:27,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:27,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...62611404a96e14b1db4c58ae3d36ab7d725bd68a' 2026-02-23 00:46:27,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:27,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 654 (Refresh metadata button to reload channel names, pixel sizes) 62611404a96e14b1db4c58ae3d36ab7d725bd68a' 2026-02-23 00:46:27,526 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-23 00:46:27,526 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-23 00:46:27,527 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:27,532 [ scc.git] DEBUG src/index.html | 5 ++ 2026-02-23 00:46:27,532 [ scc.git] DEBUG src/js/models/figure_model.js | 113 ++++++++++++++++++++++++++++++++++++++---- 2026-02-23 00:46:27,532 [ scc.git] DEBUG src/js/models/panel_model.js | 23 +++++++-- 2026-02-23 00:46:27,532 [ scc.git] DEBUG src/js/views/figure_view.js | 7 +++ 2026-02-23 00:46:27,532 [ scc.git] DEBUG 4 files changed, 136 insertions(+), 12 deletions(-) 2026-02-23 00:46:27,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:27,885 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6cb152f9484c3a0886812ad5c791c580ee456f6' 2026-02-23 00:46:27,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:27,893 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 656 (Option to add roi comment when adding ROI from OMERO) b6cb152f9484c3a0886812ad5c791c580ee456f6' 2026-02-23 00:46:27,908 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2026-02-23 00:46:27,909 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:27,912 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 3 +- 2026-02-23 00:46:27,913 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 74 +++++++++++++++------- 2026-02-23 00:46:27,913 [ scc.git] DEBUG .../modal_dialogs/roi_modal_roi.template.html | 6 ++ 2026-02-23 00:46:27,913 [ scc.git] DEBUG .../modal_dialogs/roi_modal_shape.template.html | 5 ++ 2026-02-23 00:46:27,913 [ scc.git] DEBUG src/templates/shapes/shape_sidebar.template.html | 7 +- 2026-02-23 00:46:27,913 [ scc.git] DEBUG 5 files changed, 71 insertions(+), 24 deletions(-) 2026-02-23 00:46:28,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:28,290 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-23 00:46:28,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:28,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script runnable without OMERO) 21baa4e8ba004395bd7a27d520edaa2ed4a540ac' 2026-02-23 00:46:28,326 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-02-23 00:46:28,327 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:28,331 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 594 +++++++++++++++------ 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pbm | Bin 0 -> 8441 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../scripts/omero/figure_scripts/pilfonts/B24.pil | Bin 0 -> 5143 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSans.ttf | Bin 0 -> 568896 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../omero/figure_scripts/pilfonts/FreeSansBold.ttf | Bin 0 -> 359272 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../pilfonts/FreeSansBoldOblique.ttf | Bin 0 -> 301188 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG .../figure_scripts/pilfonts/FreeSansOblique.ttf | Bin 0 -> 441432 bytes 2026-02-23 00:46:28,332 [ scc.git] DEBUG 7 files changed, 434 insertions(+), 160 deletions(-) 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pbm 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/B24.pil 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100644 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSans.ttf 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBold.ttf 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansBoldOblique.ttf 2026-02-23 00:46:28,332 [ scc.git] DEBUG create mode 100755 omero_figure/scripts/omero/figure_scripts/pilfonts/FreeSansOblique.ttf 2026-02-23 00:46:28,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:28,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...03062bc197e09e7cfcefd73bd86fdb8530cfa819' 2026-02-23 00:46:28,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:28,698 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 03062bc197e09e7cfcefd73bd86fdb8530cfa819' 2026-02-23 00:46:28,733 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-23 00:46:28,733 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-23 00:46:28,733 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-23 00:46:28,733 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-02-23 00:46:28,733 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-02-23 00:46:28,734 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:28,742 [ scc.git] DEBUG omero_figure/views.py | 11 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG package-lock.json | 72 ++- 2026-02-23 00:46:28,742 [ scc.git] DEBUG package.json | 4 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/models/figure_model.js | 104 ++++- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/models/panel_model.js | 36 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/models/zarr_utils.js | 483 +++++++++++++++++++++ 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 3 + 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/chgrp_modal_view.js | 10 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/crop_modal_view.js | 12 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/info_panel_view.js | 37 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/labels_from_maps_modal.js | 10 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/lutpicker.js | 2 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/modal_views.js | 33 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/panel_view.js | 9 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/right_panel_view.js | 11 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/roi_modal_view.js | 49 +-- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/js/views/util.js | 48 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/templates/figure_panel.template.html | 2 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/templates/info_panel.template.html | 7 + 2026-02-23 00:46:28,742 [ scc.git] DEBUG .../modal_dialogs/crop_modal_roi.template.html | 3 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/templates/viewport_inner.template.html | 3 +- 2026-02-23 00:46:28,742 [ scc.git] DEBUG src/test.html | 25 ++ 2026-02-23 00:46:28,742 [ scc.git] DEBUG 22 files changed, 832 insertions(+), 142 deletions(-) 2026-02-23 00:46:28,742 [ scc.git] DEBUG create mode 100644 src/js/models/zarr_utils.js 2026-02-23 00:46:28,742 [ scc.git] DEBUG create mode 100644 src/test.html 2026-02-23 00:46:29,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:29,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ef2d52de60235379f42877477aa2088551610bea' 2026-02-23 00:46:29,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:29,091 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 664 (Handle many channels ) ef2d52de60235379f42877477aa2088551610bea' 2026-02-23 00:46:29,117 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-23 00:46:29,117 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-23 00:46:29,117 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-23 00:46:29,117 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-23 00:46:29,117 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:46:29,118 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:46:29,121 [ scc.git] DEBUG Calling 'git reset --hard 5fe18088ae4d24f429beee59cf2a133bdf10265f' 2026-02-23 00:46:29,127 [ scc.git] DEBUG HEAD is now at 5fe18088 merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-23 00:46:29,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:29,487 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 ef2d52de60235379f42877477aa2088551610bea' 2026-02-23 00:46:29,492 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-23 00:46:29,496 [ scc.git] INFO - PR 664 Nirkan 'Handle many channels ' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js --conflicts 2026-02-23 00:46:29,498 [ scc.config] DEBUG Found github.token 2026-02-23 00:46:29,498 [ scc.git] DEBUG Not adding comment to issue #664, already --conflicts. 2026-02-23 00:46:29,498 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-23 00:46:29,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:29,506 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 665 (Ensure projection parameters are within bounds in loadJSON and setID) bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-23 00:46:29,524 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-23 00:46:29,524 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-02-23 00:46:29,524 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-02-23 00:46:29,524 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-02-23 00:46:29,524 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-02-23 00:46:29,524 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:46:29,525 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:46:29,528 [ scc.git] DEBUG Calling 'git reset --hard 5fe18088ae4d24f429beee59cf2a133bdf10265f' 2026-02-23 00:46:29,535 [ scc.git] DEBUG HEAD is now at 5fe18088 merge master -Dorg -Ssuccess-only: PR 663 (Zarr) 2026-02-23 00:46:29,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:29,903 [ scc.git] DEBUG Calling 'git merge-base e241dc01b21d8800b6e34e087cbf7099046f68e6 bdf45b550f4528d17eba292491bbb620ad49022b' 2026-02-23 00:46:29,907 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..e241dc01b21d8800b6e34e087cbf7099046f68e6' 2026-02-23 00:46:29,911 [ scc.git] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #663 will-moore 'Zarr' - src/js/models/panel_model.js - src/js/models/figure_model.js - PR #664 Nirkan 'Handle many channels ' - src/js/models/panel_model.js - Upstream changes - src/js/models/panel_model.js - src/js/models/figure_model.js --conflicts 2026-02-23 00:46:29,913 [ scc.config] DEBUG Found github.token 2026-02-23 00:46:29,913 [ scc.git] DEBUG Not adding comment to issue #665, already --conflicts. 2026-02-23 00:46:29,913 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c495cf373b4f9a6ab9eb2c1ba903635ff62b947a' 2026-02-23 00:46:29,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:29,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) c495cf373b4f9a6ab9eb2c1ba903635ff62b947a' 2026-02-23 00:46:29,943 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-02-23 00:46:29,943 [ scc.git] DEBUG Auto-merging src/index.html 2026-02-23 00:46:29,943 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-02-23 00:46:29,943 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-02-23 00:46:29,943 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:29,950 [ scc.git] DEBUG .github/workflows/pages.yml | 28 ++++++++ 2026-02-23 00:46:29,950 [ scc.git] DEBUG .gitignore | 1 + 2026-02-23 00:46:29,950 [ scc.git] DEBUG deploy_ghpages.sh | 7 ++ 2026-02-23 00:46:29,950 [ scc.git] DEBUG omero_figure/views.py | 8 ++- 2026-02-23 00:46:29,950 [ scc.git] DEBUG package.json | 2 + 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/css/figure.css | 3 +- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/index.html | 79 ++++++++++++++++++++-- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/main.js | 36 +++++++--- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/models/figure_model.js | 25 +++++++ 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 15 +++-- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/views/figure_view.js | 101 ++++++++++++++++++++--------- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/views/lutpicker.js | 34 ++++++++-- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 73 +++++++++++++++++++++ 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/js/views/util.js | 13 ++++ 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/templates/channel_slider.template.html | 4 +- 2026-02-23 00:46:29,950 [ scc.git] DEBUG src/templates/lut_picker.template.html | 6 +- 2026-02-23 00:46:29,950 [ scc.git] DEBUG vite.config.js | 12 +++- 2026-02-23 00:46:29,950 [ scc.git] DEBUG 17 files changed, 388 insertions(+), 59 deletions(-) 2026-02-23 00:46:29,950 [ scc.git] DEBUG create mode 100644 .github/workflows/pages.yml 2026-02-23 00:46:29,950 [ scc.git] DEBUG create mode 100755 deploy_ghpages.sh 2026-02-23 00:46:29,950 [ scc.git] DEBUG create mode 100644 src/js/views/open_local_file_modal.js 2026-02-23 00:46:30,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:30,302 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...317160c08a2bdc467f7867954ec7b633d4e8f5cd' 2026-02-23 00:46:30,308 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:30,310 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 667 (Label suggestion interface) 317160c08a2bdc467f7867954ec7b633d4e8f5cd' 2026-02-23 00:46:30,327 [ scc.git] DEBUG Auto-merging src/css/figure.css 2026-02-23 00:46:30,327 [ scc.git] DEBUG Auto-merging src/js/views/right_panel_view.js 2026-02-23 00:46:30,328 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:30,332 [ scc.git] DEBUG src/css/figure.css | 15 + 2026-02-23 00:46:30,332 [ scc.git] DEBUG src/js/views/label_suggestions.js | 697 ++++++++++++++++++++++++++ 2026-02-23 00:46:30,332 [ scc.git] DEBUG src/js/views/right_panel_view.js | 55 ++ 2026-02-23 00:46:30,332 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 64 +-- 2026-02-23 00:46:30,332 [ scc.git] DEBUG 4 files changed, 776 insertions(+), 55 deletions(-) 2026-02-23 00:46:30,332 [ scc.git] DEBUG create mode 100644 src/js/views/label_suggestions.js 2026-02-23 00:46:30,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:30,709 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:46:30,749 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:30,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:30,751 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:46:30,789 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:46:30,794 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c041d0> has no local changes 2026-02-23 00:46:30,794 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:46:30,802 [ scc.git] DEBUG [detached HEAD 53482a55] merge master -Dorg -Ssuccess-only 2026-02-23 00:46:30,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:46:30,802 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:46:31,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-02-23 00:46:31,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-02-23 00:46:31,664 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:32,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-23 00:46:32,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:33,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:46:33,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-02-23 00:46:34,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:34,104 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:46:34,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-02-23 00:46:35,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-02-23 00:46:35,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-23 00:46:35,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:36,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-02-23 00:46:36,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:36,934 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-02-23 00:46:36,934 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:46:36,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-23 00:46:36,934 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:36,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:36,937 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:46:36,939 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:46:36,939 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:46:36,942 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:46:36,944 [ scc.git] DEBUG Already up to date. 2026-02-23 00:46:36,944 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-02-23 00:46:37,214 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-23 00:46:37,215 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-02-23 00:46:37,218 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-02-23 00:46:37,471 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-02-23 00:46:37,471 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-02-23 00:46:37,476 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:46:37,476 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:37,476 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:37,478 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-23 00:46:37,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:37,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-02-23 00:46:37,489 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-02-23 00:46:37,490 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:37,493 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-02-23 00:46:37,493 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-02-23 00:46:37,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:37,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-23 00:46:37,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:37,629 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-02-23 00:46:37,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:46:37,639 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:46:37,639 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:46:38,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:46:38,018 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:46:38,056 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:38,056 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:38,058 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:46:38,096 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:46:38,100 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113bfad90> has no local changes 2026-02-23 00:46:38,100 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:46:38,106 [ scc.git] DEBUG [detached HEAD 656adda] merge master -Dorg -Ssuccess-only 2026-02-23 00:46:38,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:46:38,106 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:46:38,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-02-23 00:46:39,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-02-23 00:46:39,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-02-23 00:46:40,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-02-23 00:46:40,250 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:40,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-23 00:46:41,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:41,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:46:42,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-02-23 00:46:42,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:42,758 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-23 00:46:43,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-02-23 00:46:43,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-02-23 00:46:44,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-02-23 00:46:44,192 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:44,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-23 00:46:45,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:45,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-02-23 00:46:46,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:46,246 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-23 00:46:46,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-02-23 00:46:46,728 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:47,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-23 00:46:47,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:48,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-02-23 00:46:48,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:48,624 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-23 00:46:49,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-02-23 00:46:49,102 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:49,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-23 00:46:50,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:50,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-02-23 00:46:51,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:51,135 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-23 00:46:51,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-02-23 00:46:52,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-02-23 00:46:52,127 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:52,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-23 00:46:53,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:53,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-02-23 00:46:54,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:54,156 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-23 00:46:54,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-02-23 00:46:54,649 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:55,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-23 00:46:55,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:56,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-02-23 00:46:56,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:56,855 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-23 00:46:57,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-02-23 00:46:57,336 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:46:57,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-23 00:46:58,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:46:58,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-02-23 00:46:59,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:46:59,344 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-23 00:46:59,344 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:46:59,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-23 00:46:59,344 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:46:59,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:46:59,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:46:59,349 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:46:59,350 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:46:59,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:46:59,355 [ scc.git] DEBUG Already up to date. 2026-02-23 00:46:59,355 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-02-23 00:46:59,618 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:46:59,618 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-02-23 00:46:59,622 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-02-23 00:46:59,880 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:46:59,880 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-02-23 00:46:59,883 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-02-23 00:47:00,134 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:47:00,134 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-02-23 00:47:00,138 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-02-23 00:47:00,389 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:47:00,389 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-02-23 00:47:00,393 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-02-23 00:47:00,640 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:47:00,640 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-02-23 00:47:00,644 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-02-23 00:47:00,896 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:47:00,897 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-02-23 00:47:00,900 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-02-23 00:47:01,154 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-02-23 00:47:01,154 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-02-23 00:47:01,158 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:47:01,158 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:01,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:01,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-23 00:47:01,163 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:01,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-02-23 00:47:01,174 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:01,178 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-02-23 00:47:01,178 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-02-23 00:47:01,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:01,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-23 00:47:01,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:01,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-02-23 00:47:01,350 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:01,351 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:01,355 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-02-23 00:47:01,355 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-02-23 00:47:01,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:01,723 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-23 00:47:01,725 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:01,728 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-23 00:47:01,744 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:01,744 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-23 00:47:01,744 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:01,744 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:01,747 [ scc.git] DEBUG Calling 'git reset --hard cc86645818a941881bd85fc6815c38723f4bf092' 2026-02-23 00:47:01,752 [ scc.git] DEBUG HEAD is now at cc86645 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-02-23 00:47:02,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:02,123 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-02-23 00:47:02,126 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-23 00:47:02,128 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-02-23 00:47:02,130 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:02,130 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-02-23 00:47:02,130 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-23 00:47:02,133 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:02,135 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-02-23 00:47:02,149 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:02,150 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:02,154 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-02-23 00:47:02,154 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-02-23 00:47:02,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:02,514 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-23 00:47:02,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:02,519 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-02-23 00:47:02,534 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:02,535 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:02,539 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-02-23 00:47:02,539 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-02-23 00:47:02,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:02,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-23 00:47:02,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:02,917 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-23 00:47:02,932 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:02,932 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-23 00:47:02,932 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:02,932 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:02,935 [ scc.git] DEBUG Calling 'git reset --hard 2942b2602a3fb5d216fb0fb8a40496dc4e469c9e' 2026-02-23 00:47:02,939 [ scc.git] DEBUG HEAD is now at 2942b26 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-23 00:47:03,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:03,299 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-02-23 00:47:03,302 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-23 00:47:03,304 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-02-23 00:47:03,306 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:03,306 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-02-23 00:47:03,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-23 00:47:03,310 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:03,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-23 00:47:03,330 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:03,330 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-23 00:47:03,330 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:03,330 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:03,333 [ scc.git] DEBUG Calling 'git reset --hard 2942b2602a3fb5d216fb0fb8a40496dc4e469c9e' 2026-02-23 00:47:03,337 [ scc.git] DEBUG HEAD is now at 2942b26 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-02-23 00:47:03,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:03,706 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-02-23 00:47:03,708 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-02-23 00:47:03,711 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-02-23 00:47:03,713 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:03,714 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-02-23 00:47:03,714 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:47:03,753 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:03,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:03,755 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:47:03,791 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:47:03,796 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113bfaad0> has no local changes 2026-02-23 00:47:03,796 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:47:03,802 [ scc.git] DEBUG [detached HEAD a310cbe] merge master -Dorg -Ssuccess-only 2026-02-23 00:47:03,803 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:47:03,803 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:47:04,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-02-23 00:47:04,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-02-23 00:47:05,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-23 00:47:05,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:06,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:47:06,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-02-23 00:47:07,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:07,266 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-02-23 00:47:07,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-02-23 00:47:08,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-23 00:47:08,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:09,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:47:09,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-02-23 00:47:10,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:10,166 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-23 00:47:10,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-02-23 00:47:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-02-23 00:47:11,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-02-23 00:47:12,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-02-23 00:47:12,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502 HTTP/1.1" 200 None 2026-02-23 00:47:13,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/502/comments HTTP/1.1" 200 None 2026-02-23 00:47:13,041 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:47:13,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-23 00:47:14,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:14,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:47:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/45d08b7e29871ecff0386975c975dacd0865bcc4 HTTP/1.1" 200 None 2026-02-23 00:47:15,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/45d08b7e29871ecff0386975c975dacd0865bcc4?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:15,608 [ scc.repo] DEBUG - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-23 00:47:16,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/499 HTTP/1.1" 200 None 2026-02-23 00:47:16,110 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:47:16,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-23 00:47:17,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:17,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc HTTP/1.1" 200 None 2026-02-23 00:47:18,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/b19bbac5f17ff2b53ba573ca58108d28d2d86bcc?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:18,199 [ scc.repo] DEBUG - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-23 00:47:18,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-02-23 00:47:19,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-02-23 00:47:19,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-02-23 00:47:20,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-02-23 00:47:20,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-23 00:47:21,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:21,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-02-23 00:47:22,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:22,046 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-23 00:47:22,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-02-23 00:47:22,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-02-23 00:47:23,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-23 00:47:23,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:24,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-02-23 00:47:24,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:24,890 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-02-23 00:47:25,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-02-23 00:47:25,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-02-23 00:47:26,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-23 00:47:26,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:27,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-02-23 00:47:27,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:27,676 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-02-23 00:47:28,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-02-23 00:47:28,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-02-23 00:47:29,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-02-23 00:47:29,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:30,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:47:30,126 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:47:30,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-23 00:47:30,126 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:30,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:30,129 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:47:30,131 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:47:30,132 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:47:30,134 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:47:30,141 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-02-23 00:47:30,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-02-23 00:47:31,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-02-23 00:47:31,547 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-02-23 00:47:31,935 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:31,936 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-02-23 00:47:31,940 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-02-23 00:47:32,377 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:32,377 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-02-23 00:47:32,382 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-02-23 00:47:32,637 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:32,637 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-02-23 00:47:32,641 [ scc.git] DEBUG Calling 'git fetch origin pull/499/head' 2026-02-23 00:47:32,897 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:32,897 [ scc.git] DEBUG * branch refs/pull/499/head -> FETCH_HEAD 2026-02-23 00:47:32,901 [ scc.git] DEBUG Calling 'git fetch origin pull/502/head' 2026-02-23 00:47:33,153 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:33,153 [ scc.git] DEBUG * branch refs/pull/502/head -> FETCH_HEAD 2026-02-23 00:47:33,157 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-02-23 00:47:33,534 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:33,535 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-02-23 00:47:33,539 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-02-23 00:47:33,792 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-02-23 00:47:33,792 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-02-23 00:47:33,796 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:47:33,796 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:33,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:33,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-23 00:47:33,803 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:33,805 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-02-23 00:47:33,816 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-02-23 00:47:33,816 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-02-23 00:47:33,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:33,820 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-02-23 00:47:33,820 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-02-23 00:47:33,820 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-02-23 00:47:33,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:33,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-23 00:47:33,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:33,980 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-02-23 00:47:33,995 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-02-23 00:47:33,996 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-02-23 00:47:33,996 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-02-23 00:47:33,996 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-02-23 00:47:33,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:34,000 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-02-23 00:47:34,000 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-02-23 00:47:34,000 [ scc.git] DEBUG src/app/header.html | 5 + 2026-02-23 00:47:34,000 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-02-23 00:47:34,000 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-02-23 00:47:34,000 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-02-23 00:47:34,000 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-02-23 00:47:34,000 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-02-23 00:47:34,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:34,393 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-23 00:47:34,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:34,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-02-23 00:47:34,410 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-02-23 00:47:34,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:34,414 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-02-23 00:47:34,414 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-02-23 00:47:34,414 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-02-23 00:47:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:34,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-23 00:47:34,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:34,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) b19bbac5f17ff2b53ba573ca58108d28d2d86bcc' 2026-02-23 00:47:34,811 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:34,819 [ scc.git] DEBUG package-lock.json | 322 +++++++++++++++++++++++++++--------------------------- 2026-02-23 00:47:34,819 [ scc.git] DEBUG package.json | 2 +- 2026-02-23 00:47:34,819 [ scc.git] DEBUG 2 files changed, 163 insertions(+), 161 deletions(-) 2026-02-23 00:47:35,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:35,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-23 00:47:35,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:35,188 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 502 (Bump serialize-javascript and mocha) 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-23 00:47:35,221 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:47:35,221 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-02-23 00:47:35,221 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:35,222 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:35,225 [ scc.git] DEBUG Calling 'git reset --hard ff0cc5c6af413693e107a11843c7ec24e86f1225' 2026-02-23 00:47:35,235 [ scc.git] DEBUG HEAD is now at ff0cc5c merge master -Dorg -Ssuccess-only: PR 499 (Bump nanoid and mocha) 2026-02-23 00:47:35,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:35,590 [ scc.git] DEBUG Calling 'git merge-base 5e2de43ad401fb00690a79644056e0ac15fabfd5 45d08b7e29871ecff0386975c975dacd0865bcc4' 2026-02-23 00:47:35,593 [ scc.git] DEBUG Calling 'git diff --name-only 7a798ceeb3926d049d73788555fb63269a071052..5e2de43ad401fb00690a79644056e0ac15fabfd5' 2026-02-23 00:47:35,596 [ scc.git] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #499 dependabot[bot] 'Bump nanoid and mocha' - package-lock.json --conflicts 2026-02-23 00:47:35,598 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:35,598 [ scc.git] DEBUG Not adding comment to issue #502, already --conflicts. 2026-02-23 00:47:35,598 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-23 00:47:35,602 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:35,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-02-23 00:47:35,618 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:35,621 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-02-23 00:47:35,621 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-02-23 00:47:35,621 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-02-23 00:47:35,621 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-02-23 00:47:35,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:35,980 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-23 00:47:35,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:35,986 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-02-23 00:47:35,999 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-23 00:47:36,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:36,003 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-02-23 00:47:36,003 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-02-23 00:47:36,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:36,380 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:47:36,420 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:36,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:36,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:47:36,460 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:47:36,466 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c1dc90> has no local changes 2026-02-23 00:47:36,466 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:47:36,472 [ scc.git] DEBUG [detached HEAD c8b36b0] merge master -Dorg -Ssuccess-only 2026-02-23 00:47:36,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:47:36,473 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:47:36,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-02-23 00:47:37,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-02-23 00:47:37,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-02-23 00:47:37,925 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:47:38,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-23 00:47:38,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:39,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:47:40,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-02-23 00:47:40,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:40,520 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:47:41,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-02-23 00:47:41,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-23 00:47:42,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:42,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-02-23 00:47:42,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:42,933 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:47:43,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-02-23 00:47:43,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-02-23 00:47:44,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-23 00:47:44,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:45,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-02-23 00:47:45,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:45,790 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-02-23 00:47:45,790 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:47:45,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-23 00:47:45,790 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:45,790 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:45,793 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:47:45,795 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:47:45,795 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:47:45,798 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:47:45,801 [ scc.git] DEBUG Already up to date. 2026-02-23 00:47:45,801 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-23 00:47:46,067 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-23 00:47:46,067 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-23 00:47:46,071 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-02-23 00:47:46,319 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-23 00:47:46,319 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-02-23 00:47:46,323 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-02-23 00:47:46,575 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-02-23 00:47:46,575 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-02-23 00:47:46,580 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:47:46,580 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:46,580 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:46,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-23 00:47:46,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:46,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-02-23 00:47:46,595 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:46,598 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-02-23 00:47:46,598 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-02-23 00:47:46,598 [ scc.git] DEBUG requirements.txt | 2 +- 2026-02-23 00:47:46,598 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-02-23 00:47:46,598 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-02-23 00:47:46,599 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-02-23 00:47:46,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:46,740 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-23 00:47:46,743 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:46,745 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-02-23 00:47:46,752 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:46,755 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:47:46,755 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:47:47,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:47,138 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-23 00:47:47,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:47,143 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-23 00:47:47,150 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-02-23 00:47:47,150 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-02-23 00:47:47,150 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:47,150 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:47,153 [ scc.git] DEBUG Calling 'git reset --hard 54b681e4d20ca7953faa8f456c60a5ce6bcf2d6d' 2026-02-23 00:47:47,157 [ scc.git] DEBUG HEAD is now at 54b681e merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-02-23 00:47:47,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:47,540 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-02-23 00:47:47,542 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-02-23 00:47:47,545 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-02-23 00:47:47,547 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:47,547 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-02-23 00:47:47,547 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:47:47,585 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:47,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:47,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:47:47,628 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:47:47,632 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a562d0> has no local changes 2026-02-23 00:47:47,632 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:47:47,638 [ scc.git] DEBUG [detached HEAD 0eda66e] merge master -Dorg -Ssuccess-only 2026-02-23 00:47:47,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:47:47,638 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:47:48,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-02-23 00:47:48,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-02-23 00:47:49,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-02-23 00:47:49,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-23 00:47:50,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:50,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-02-23 00:47:50,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:50,981 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-23 00:47:51,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-02-23 00:47:52,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-02-23 00:47:52,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-23 00:47:53,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:53,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-02-23 00:47:54,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:54,049 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-23 00:47:54,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-02-23 00:47:55,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-02-23 00:47:55,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-23 00:47:56,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:47:56,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-02-23 00:47:57,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:47:57,106 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-23 00:47:57,106 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:47:57,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-23 00:47:57,106 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:57,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:57,109 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:47:57,111 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:47:57,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:47:57,114 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:47:57,120 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-02-23 00:47:57,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-02-23 00:47:57,841 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-02-23 00:47:58,119 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-23 00:47:58,119 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-02-23 00:47:58,122 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-02-23 00:47:58,380 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-23 00:47:58,380 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-02-23 00:47:58,384 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-02-23 00:47:58,640 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-02-23 00:47:58,641 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-02-23 00:47:58,645 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:47:58,645 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:58,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:58,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-23 00:47:58,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:58,654 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-23 00:47:58,666 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-02-23 00:47:58,666 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-02-23 00:47:58,666 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-23 00:47:58,666 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-23 00:47:58,666 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:58,666 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:58,669 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-23 00:47:58,673 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-23 00:47:58,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:58,814 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-02-23 00:47:58,818 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-23 00:47:58,821 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-02-23 00:47:58,823 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:58,823 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-02-23 00:47:58,823 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-23 00:47:58,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:58,829 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-23 00:47:58,843 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-02-23 00:47:58,843 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-02-23 00:47:58,843 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-02-23 00:47:58,843 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:47:58,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:47:58,846 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-23 00:47:58,850 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-02-23 00:47:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:59,203 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-02-23 00:47:59,207 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-02-23 00:47:59,209 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-02-23 00:47:59,211 [ scc.config] DEBUG Found github.token 2026-02-23 00:47:59,211 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-02-23 00:47:59,211 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-23 00:47:59,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:59,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-02-23 00:47:59,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:47:59,228 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-02-23 00:47:59,228 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-02-23 00:47:59,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:47:59,600 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:47:59,638 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:47:59,639 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:47:59,641 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:47:59,678 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:47:59,681 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113bfb650> has no local changes 2026-02-23 00:47:59,681 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:47:59,688 [ scc.git] DEBUG [detached HEAD 4a80189] merge master -Dorg -Ssuccess-only 2026-02-23 00:47:59,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:47:59,688 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:00,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-02-23 00:48:00,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-02-23 00:48:01,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-23 00:48:01,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:02,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:03,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-02-23 00:48:03,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:03,426 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:48:03,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-02-23 00:48:03,928 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:04,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-23 00:48:04,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:05,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:06,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-02-23 00:48:06,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:06,533 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-23 00:48:07,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-02-23 00:48:07,001 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:07,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-23 00:48:08,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:08,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:09,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-02-23 00:48:09,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:09,833 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-23 00:48:10,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-02-23 00:48:10,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-02-23 00:48:11,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-02-23 00:48:11,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-02-23 00:48:12,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-02-23 00:48:12,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-02-23 00:48:13,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-02-23 00:48:13,183 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:13,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-23 00:48:13,183 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:13,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:13,186 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:13,189 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:13,189 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:13,192 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:13,195 [ scc.git] DEBUG Already up to date. 2026-02-23 00:48:13,195 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-02-23 00:48:13,464 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-23 00:48:13,464 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-02-23 00:48:13,468 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-02-23 00:48:13,945 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-23 00:48:13,945 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-02-23 00:48:13,949 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-02-23 00:48:14,312 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-02-23 00:48:14,312 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-02-23 00:48:14,316 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:14,316 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:14,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:14,318 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-23 00:48:14,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:14,323 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-02-23 00:48:14,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:14,333 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-02-23 00:48:14,333 [ scc.git] DEBUG package.json | 2 +- 2026-02-23 00:48:14,333 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-02-23 00:48:14,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:14,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-02-23 00:48:14,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:14,484 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-02-23 00:48:14,493 [ scc.git] DEBUG Auto-merging package-lock.json 2026-02-23 00:48:14,493 [ scc.git] DEBUG Auto-merging package.json 2026-02-23 00:48:14,494 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:14,497 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-02-23 00:48:14,497 [ scc.git] DEBUG package.json | 2 +- 2026-02-23 00:48:14,497 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-02-23 00:48:14,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:14,866 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-23 00:48:14,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:14,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-02-23 00:48:14,879 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:14,881 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:14,882 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:15,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:15,276 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:15,314 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:15,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:15,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:15,352 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:15,356 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a5e150> has no local changes 2026-02-23 00:48:15,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:15,362 [ scc.git] DEBUG [detached HEAD f727879] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:15,362 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:15,362 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:15,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-02-23 00:48:16,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-02-23 00:48:16,267 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:16,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-23 00:48:17,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:17,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-02-23 00:48:18,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:18,833 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:48:18,833 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:18,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-23 00:48:18,833 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:18,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:18,836 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:18,838 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:18,838 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:18,841 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:18,844 [ scc.git] DEBUG Already up to date. 2026-02-23 00:48:18,844 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-02-23 00:48:19,103 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-02-23 00:48:19,104 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-02-23 00:48:19,108 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:19,108 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:19,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:19,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-23 00:48:19,113 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:19,115 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-02-23 00:48:19,121 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:19,124 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:19,124 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:19,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:19,285 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:19,323 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:19,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:19,325 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:19,363 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:19,366 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a68490> has no local changes 2026-02-23 00:48:19,366 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:19,371 [ scc.git] DEBUG [detached HEAD d22999a] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:19,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:19,371 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:19,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-02-23 00:48:20,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-02-23 00:48:20,310 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:20,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-23 00:48:21,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:21,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:22,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-23 00:48:22,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:23,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-02-23 00:48:23,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-02-23 00:48:23,827 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:48:24,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None 2026-02-23 00:48:24,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None 2026-02-23 00:48:25,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-23 00:48:25,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:26,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:26,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-23 00:48:27,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:27,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None 2026-02-23 00:48:28,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None 2026-02-23 00:48:28,004 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions' 2026-02-23 00:48:28,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-02-23 00:48:28,482 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:28,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-23 00:48:28,482 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:28,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:28,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:28,487 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:28,487 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:28,489 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:28,492 [ scc.git] DEBUG Already up to date. 2026-02-23 00:48:28,492 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head' 2026-02-23 00:48:28,762 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-23 00:48:28,762 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD 2026-02-23 00:48:28,766 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-02-23 00:48:29,020 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-02-23 00:48:29,020 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-02-23 00:48:29,024 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:29,025 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:29,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:29,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-23 00:48:29,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:29,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3' 2026-02-23 00:48:29,039 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:29,042 [ scc.git] DEBUG setup.py | 4 +- 2026-02-23 00:48:29,042 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 + 2026-02-23 00:48:29,042 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++-- 2026-02-23 00:48:29,042 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-) 2026-02-23 00:48:29,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:29,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-02-23 00:48:29,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:29,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-02-23 00:48:29,201 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:29,203 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:29,203 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:29,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:29,594 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:29,632 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:29,632 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:29,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:29,670 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:29,673 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a7ac10> has no local changes 2026-02-23 00:48:29,673 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:29,679 [ scc.git] DEBUG [detached HEAD 442cc05] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:29,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:29,679 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:30,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-02-23 00:48:30,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-02-23 00:48:30,728 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:31,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-23 00:48:31,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:32,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:32,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-02-23 00:48:33,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:33,254 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:48:33,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-02-23 00:48:34,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-02-23 00:48:34,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-23 00:48:35,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:35,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-02-23 00:48:36,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:36,260 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-23 00:48:36,260 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:36,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-23 00:48:36,260 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:36,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:36,263 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:36,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:36,265 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:36,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:36,270 [ scc.git] DEBUG Already up to date. 2026-02-23 00:48:36,270 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-23 00:48:36,671 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-23 00:48:36,672 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-23 00:48:36,678 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-23 00:48:37,037 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-02-23 00:48:37,038 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-23 00:48:37,042 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:37,042 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:37,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:37,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-23 00:48:37,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:37,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-23 00:48:37,057 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG Auto-merging setup.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-02-23 00:48:37,057 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:48:37,057 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:48:37,060 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-23 00:48:37,063 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-02-23 00:48:37,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:37,217 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-02-23 00:48:37,220 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-02-23 00:48:37,223 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/signup_settings.py - omero_signup/urls.py - setup.py - omero_signup/views.py --conflicts 2026-02-23 00:48:37,225 [ scc.config] DEBUG Found github.token 2026-02-23 00:48:37,225 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-02-23 00:48:37,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-23 00:48:37,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:37,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-02-23 00:48:37,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:37,239 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:37,239 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:37,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:37,632 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:37,669 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:37,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:37,672 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:37,708 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:37,711 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a68610> has no local changes 2026-02-23 00:48:37,711 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:37,717 [ scc.git] DEBUG [detached HEAD a8b37ed] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:37,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:37,717 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:38,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-02-23 00:48:38,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-02-23 00:48:39,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-02-23 00:48:39,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-02-23 00:48:40,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-23 00:48:40,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:41,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-02-23 00:48:41,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:41,508 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-02-23 00:48:41,508 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:41,508 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-23 00:48:41,508 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:41,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:41,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:41,513 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:41,513 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:41,516 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:41,523 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-02-23 00:48:42,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-02-23 00:48:42,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-02-23 00:48:43,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-02-23 00:48:43,721 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-02-23 00:48:43,987 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-02-23 00:48:43,987 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-02-23 00:48:43,991 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:43,991 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:43,991 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:43,993 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-02-23 00:48:43,996 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:43,998 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-02-23 00:48:44,005 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-02-23 00:48:44,005 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:44,008 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-02-23 00:48:44,008 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-02-23 00:48:44,009 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-02-23 00:48:44,009 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-02-23 00:48:44,009 [ scc.git] DEBUG ms/test | 2 ++ 2026-02-23 00:48:44,009 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-02-23 00:48:44,009 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-02-23 00:48:44,009 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-02-23 00:48:44,009 [ scc.git] DEBUG create mode 100755 ms/test 2026-02-23 00:48:44,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:44,149 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:44,188 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:44,188 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:44,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:44,229 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:44,232 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111ad3490> has no local changes 2026-02-23 00:48:44,232 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:44,238 [ scc.git] DEBUG [detached HEAD 93eda94] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:44,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:44,238 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:44,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-02-23 00:48:45,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-02-23 00:48:45,166 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:45,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-23 00:48:46,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:46,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:47,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-02-23 00:48:47,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:47,762 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:48:47,762 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:47,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-23 00:48:47,763 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:47,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:47,765 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:47,768 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:47,768 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:47,770 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:47,773 [ scc.git] DEBUG Already up to date. 2026-02-23 00:48:47,773 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-02-23 00:48:48,431 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-02-23 00:48:48,432 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-02-23 00:48:48,436 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:48,436 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:48,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:48,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-23 00:48:48,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:48,443 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-02-23 00:48:48,449 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:48,452 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:48,452 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:48,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:48,635 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:48,672 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:48,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:48,674 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:48,710 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:48,713 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111acdb50> has no local changes 2026-02-23 00:48:48,713 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:48,719 [ scc.git] DEBUG [detached HEAD c3cefdb] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:48,719 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:48,719 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:49,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-02-23 00:48:49,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-02-23 00:48:49,659 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:48:50,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-23 00:48:50,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:51,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:51,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-02-23 00:48:52,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:52,326 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:48:52,326 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:48:52,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-23 00:48:52,326 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:52,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:52,329 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:48:52,331 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:48:52,332 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:48:52,334 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:48:52,341 [ scc.git] DEBUG Updating deab817..160d894 2026-02-23 00:48:53,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-02-23 00:48:53,027 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-02-23 00:48:53,313 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-02-23 00:48:53,313 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-02-23 00:48:53,317 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:48:53,318 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:53,318 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:53,320 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-23 00:48:53,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:53,324 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-02-23 00:48:53,330 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:48:53,333 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:48:53,333 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:48:53,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:48:53,471 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:48:53,508 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:48:53,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:48:53,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:48:53,546 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:48:53,549 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c71b10> has no local changes 2026-02-23 00:48:53,550 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:48:53,555 [ scc.git] DEBUG [detached HEAD 38aab91] merge master -Dorg -Ssuccess-only 2026-02-23 00:48:53,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:48:53,556 [ scc.git] INFO Overriding base-branch from master to main 2026-02-23 00:48:53,556 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:48:54,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-02-23 00:48:54,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-02-23 00:48:55,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-02-23 00:48:55,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-23 00:48:56,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:48:56,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:48:57,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-02-23 00:48:57,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:48:57,466 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-02-23 00:48:57,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-02-23 00:48:58,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-02-23 00:48:58,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-02-23 00:48:59,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-23 00:48:59,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:49:00,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-02-23 00:49:00,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:49:00,774 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-23 00:49:00,774 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:49:00,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-23 00:49:00,774 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:00,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:00,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-02-23 00:49:00,779 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:49:00,779 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-02-23 00:49:00,782 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-02-23 00:49:00,788 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-02-23 00:49:01,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-02-23 00:49:02,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-02-23 00:49:02,287 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-02-23 00:49:02,563 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-23 00:49:02,564 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-02-23 00:49:02,568 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-02-23 00:49:02,968 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-02-23 00:49:02,968 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-02-23 00:49:02,973 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:49:02,973 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:02,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:02,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-23 00:49:02,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:02,981 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-23 00:49:02,988 [ scc.git] DEBUG Auto-merging README.rst 2026-02-23 00:49:02,989 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-02-23 00:49:02,989 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-02-23 00:49:02,989 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-23 00:49:02,989 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-02-23 00:49:02,989 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-02-23 00:49:02,991 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-23 00:49:02,995 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-02-23 00:49:03,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:03,154 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-02-23 00:49:03,157 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-02-23 00:49:03,160 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#66](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-02-23 00:49:03,162 [ scc.config] DEBUG Found github.token 2026-02-23 00:49:03,162 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-02-23 00:49:03,162 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-23 00:49:03,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:03,167 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-02-23 00:49:03,174 [ scc.git] DEBUG Auto-merging README.rst 2026-02-23 00:49:03,174 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-02-23 00:49:03,175 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:49:03,178 [ scc.git] DEBUG README.rst | 3 + 2026-02-23 00:49:03,178 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-02-23 00:49:03,178 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-02-23 00:49:03,178 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-02-23 00:49:03,178 [ scc.git] DEBUG setup.py | 5 +- 2026-02-23 00:49:03,178 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-02-23 00:49:03,178 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-02-23 00:49:03,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:03,546 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:49:03,583 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:03,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:03,585 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:03,621 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:03,624 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111a6f010> has no local changes 2026-02-23 00:49:03,624 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:03,630 [ scc.git] DEBUG [detached HEAD 96422f9] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:03,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:03,630 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:49:04,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-02-23 00:49:04,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-02-23 00:49:04,560 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:49:05,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-23 00:49:05,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:49:06,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:49:06,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-02-23 00:49:07,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:49:07,151 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:07,151 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:49:07,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-23 00:49:07,151 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:07,151 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:07,154 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:49:07,156 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:49:07,156 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:49:07,159 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:49:07,162 [ scc.git] DEBUG Already up to date. 2026-02-23 00:49:07,162 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-02-23 00:49:07,439 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-02-23 00:49:07,439 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-02-23 00:49:07,443 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:49:07,443 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:07,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:07,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-23 00:49:07,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:07,449 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-02-23 00:49:07,455 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:49:07,458 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:49:07,458 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:49:07,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:07,606 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:49:07,645 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:07,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:07,647 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:07,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:07,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c1d2d0> has no local changes 2026-02-23 00:49:07,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:07,693 [ scc.git] DEBUG [detached HEAD 9cd9dc9] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:07,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:07,693 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:49:08,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-02-23 00:49:08,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-02-23 00:49:08,579 [ scc.repo] DEBUG # ... Include label: dependencies 2026-02-23 00:49:09,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-23 00:49:09,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-02-23 00:49:10,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-02-23 00:49:10,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-02-23 00:49:11,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-02-23 00:49:11,121 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:11,121 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:49:11,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-23 00:49:11,121 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:11,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:11,123 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:49:11,126 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:49:11,126 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:49:11,128 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:49:11,131 [ scc.git] DEBUG Already up to date. 2026-02-23 00:49:11,131 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-02-23 00:49:11,400 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-02-23 00:49:11,400 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-02-23 00:49:11,404 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:49:11,404 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:11,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:11,406 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-23 00:49:11,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:11,411 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-02-23 00:49:11,418 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-02-23 00:49:11,420 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-02-23 00:49:11,420 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-02-23 00:49:11,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:11,571 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:49:11,608 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:11,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:11,610 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:11,646 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:11,649 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff111b1b710> has no local changes 2026-02-23 00:49:11,649 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:11,654 [ scc.git] DEBUG [detached HEAD 6f443e8] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:11,655 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:11,655 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:49:12,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-02-23 00:49:12,018 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:49:12,018 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-23 00:49:12,018 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:12,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:12,021 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-02-23 00:49:12,023 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:49:12,023 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-02-23 00:49:12,026 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-02-23 00:49:12,029 [ scc.git] DEBUG Already up to date. 2026-02-23 00:49:12,029 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:49:12,029 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:12,029 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:12,031 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:49:12,068 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:12,068 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:12,070 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:12,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:12,109 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c71e90> has no local changes 2026-02-23 00:49:12,109 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:12,115 [ scc.git] DEBUG [detached HEAD 0b99a99] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:12,115 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:12,115 [ scc.git] INFO Overriding base-branch from master to develop 2026-02-23 00:49:12,115 [ scc.repo] DEBUG ## PRs found: 2026-02-23 00:49:12,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2026-02-23 00:49:13,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2026-02-23 00:49:13,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2026-02-23 00:49:13,520 [ scc.repo] DEBUG ## Branches found: 2026-02-23 00:49:13,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-23 00:49:13,520 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:13,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:13,522 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-02-23 00:49:13,524 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-02-23 00:49:13,525 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-02-23 00:49:13,527 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-02-23 00:49:13,539 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-02-23 00:49:14,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-02-23 00:49:14,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-02-23 00:49:15,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-02-23 00:49:16,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-02-23 00:49:16,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-02-23 00:49:17,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-02-23 00:49:18,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-02-23 00:49:18,290 [ scc.git] DEBUG ## Unique users: [] 2026-02-23 00:49:18,290 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:18,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:18,293 [ scc.git] DEBUG Calling 'git submodule update' 2026-02-23 00:49:18,331 [ scc.git] DEBUG Get sha1 of %s 2026-02-23 00:49:18,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-02-23 00:49:18,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:18,369 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:18,373 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113b6d290> has no local changes 2026-02-23 00:49:18,373 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:18,378 [ scc.git] DEBUG [detached HEAD a8afb25] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:18,379 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:18,379 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-02-23 00:49:18,448 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-02-23 00:49:18,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:18,691 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-02-23 00:49:18,693 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-02-23 00:49:19,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:19,082 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-02-23 00:49:19,084 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-02-23 00:49:19,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:19,471 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-02-23 00:49:19,473 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-02-23 00:49:19,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:19,892 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-02-23 00:49:20,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:20,295 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-02-23 00:49:20,297 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-02-23 00:49:20,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:20,689 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-02-23 00:49:20,691 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-02-23 00:49:21,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:21,095 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-02-23 00:49:21,097 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-02-23 00:49:21,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:21,480 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-02-23 00:49:21,482 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-02-23 00:49:21,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:21,872 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-02-23 00:49:21,874 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-02-23 00:49:22,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:22,278 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-02-23 00:49:22,280 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-02-23 00:49:22,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:22,675 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-02-23 00:49:22,677 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-02-23 00:49:23,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:23,062 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-02-23 00:49:23,064 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-02-23 00:49:23,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:23,456 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-02-23 00:49:23,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:23,857 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-02-23 00:49:24,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:24,264 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-02-23 00:49:24,266 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-02-23 00:49:24,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:24,665 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-02-23 00:49:25,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:25,066 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-02-23 00:49:25,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:25,606 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-02-23 00:49:25,607 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-02-23 00:49:25,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:25,997 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-02-23 00:49:25,999 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-02-23 00:49:26,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:26,397 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-02-23 00:49:26,399 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-02-23 00:49:26,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:26,798 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-02-23 00:49:26,800 [ scc.config] DEBUG Found submodule.scripts.url 2026-02-23 00:49:27,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-02-23 00:49:27,190 [ scc.config] DEBUG Found submodule.scripts.branch 2026-02-23 00:49:27,190 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-02-23 00:49:27,268 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff113c40c10> has local changes 2026-02-23 00:49:27,268 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9530c10 Previously merged: - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..e241dc01 Previously merged: - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 662 will-moore 'Export script runnable without OMERO' - PR 663 will-moore 'Zarr' - PR 666 will-moore 'Standalone app' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 664 Nirkan 'Handle many channels ' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 499 dependabot[bot] 'Bump nanoid and mocha' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Conflicting PRs (not included): - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 33 jo-mueller 'Add roi to array functions' - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#66 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/66/)' 2026-02-23 00:49:27,279 [ scc.git] DEBUG [detached HEAD ca9bba4] merge master -Dorg -Ssuccess-only 2026-02-23 00:49:27,279 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-02-23 00:49:27,279 [ scc.merge] INFO Repository: ome/omero-plugins 2026-02-23 00:49:27,279 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,279 [ scc.merge] INFO 2026-02-23 00:49:27,279 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,279 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-02-23 00:49:27,279 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-02-23 00:49:27,279 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-02-23 00:49:27,279 [ scc.merge] INFO 2026-02-23 00:49:27,279 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-02-23 00:49:27,279 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,279 [ scc.merge] INFO 2026-02-23 00:49:27,279 [ scc.merge] INFO 2026-02-23 00:49:27,279 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-02-23 00:49:27,279 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-02-23 00:49:27,280 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-02-23 00:49:27,280 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-02-23 00:49:27,280 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-02-23 00:49:27,280 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-02-23 00:49:27,280 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-02-23 00:49:27,280 [ scc.merge] INFO Updating 11d3587..9530c10 2026-02-23 00:49:27,280 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-02-23 00:49:27,280 [ scc.merge] INFO 2026-02-23 00:49:27,280 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-02-23 00:49:27,280 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,281 [ scc.merge] INFO Repository: ome/omero-figure 2026-02-23 00:49:27,281 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-02-23 00:49:27,281 [ scc.merge] INFO Updating 9cc36cde..e241dc01 2026-02-23 00:49:27,281 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,281 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 662 will-moore 'Export script runnable without OMERO' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,281 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,281 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-02-23 00:49:27,281 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,281 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-02-23 00:49:27,281 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,281 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Repository: ome/omero-gallery 2026-02-23 00:49:27,282 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-02-23 00:49:27,282 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-02-23 00:49:27,282 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-02-23 00:49:27,282 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Repository: ome/omero-mapr 2026-02-23 00:49:27,282 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-02-23 00:49:27,282 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-02-23 00:49:27,282 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,282 [ scc.merge] INFO 2026-02-23 00:49:27,282 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Repository: ome/omero-metadata 2026-02-23 00:49:27,283 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-02-23 00:49:27,283 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Repository: ome/omero-parade 2026-02-23 00:49:27,283 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-02-23 00:49:27,283 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-02-23 00:49:27,283 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Repository: ome/omero-rois 2026-02-23 00:49:27,283 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-02-23 00:49:27,283 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions' 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Repository: ome/omero-signup 2026-02-23 00:49:27,283 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,283 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,283 [ scc.merge] INFO 2026-02-23 00:49:27,283 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-02-23 00:49:27,284 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-02-23 00:49:27,284 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-02-23 00:49:27,284 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: ome/omero-upload 2026-02-23 00:49:27,284 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-02-23 00:49:27,284 [ scc.merge] INFO Updating deab817..160d894 2026-02-23 00:49:27,284 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-02-23 00:49:27,284 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-02-23 00:49:27,284 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-02-23 00:49:27,284 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Conflicting PRs (not included): 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-02-23 00:49:27,284 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,284 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,284 [ scc.merge] INFO 2026-02-23 00:49:27,284 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-02-23 00:49:27,285 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] INFO Merged PRs: 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-02-23 00:49:27,285 [ scc.merge] INFO Already up to date. 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] INFO Repository: ome/scripts 2026-02-23 00:49:27,285 [ scc.merge] INFO Excluded PRs: 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2026-02-23 00:49:27,285 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-02-23 00:49:27,285 [ scc.merge] INFO Previously merged: 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-02-23 00:49:27,285 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] INFO 2026-02-23 00:49:27,285 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-02-23 00:49:27,285 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-02-23 00:49:27,287 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-02-23 00:49:27,289 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,291 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-02-23 00:49:27,291 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,293 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-02-23 00:49:27,294 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-02-23 00:49:27,296 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,298 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-02-23 00:49:27,298 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-02-23 00:49:27,300 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-02-23 00:49:27,302 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-02-23 00:49:27,304 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-02-23 00:49:27,306 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-02-23 00:49:27,308 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-02-23 00:49:27,310 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-02-23 00:49:27,313 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-02-23 00:49:27,315 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-02-23 00:49:27,317 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-02-23 00:49:27,319 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-02-23 00:49:27,321 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-02-23 00:49:27,323 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,325 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-02-23 00:49:27,325 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-02-23 00:49:27,327 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-02-23 00:49:27,329 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-02-23 00:49:27,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-02-23 00:49:27,331 [ scc.git] DEBUG Calling 'git remote' 2026-02-23 00:49:27,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 048429e] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 60673cc] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-02-23 00:50:13,860 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-02-23 00:50:23,062 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-02-23 00:50:25,501 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-23 00:50:30,175 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-02-23 00:51:10,792 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS