![[Jenkins]](/jenkins/static/f6f303f9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 75 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 # timeout=10 Commit message: "Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8" > git rev-list --no-walk b5c2ee85ce0a757c99f9ac83325f7c567e75feb6 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 67 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.11.0-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.31.0-py3-none-any.whl (62 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.11.0-py3-none-any.whl (34 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.2.2-py3-none-any.whl (163 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.7-cp39-abi3-manylinux_2_28_x86_64.whl (3.8 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.2.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.7 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.31.0 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.11.0 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-05-18 00:41:31,419 [ scc.config] DEBUG Found github.token 2024-05-18 00:41:31,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-18 00:41:31,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:41:32,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:41:32,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-18 00:41:32,460 [ scc.gh] DEBUG 2344 remaining from 5000 (Reset at 00:05 2024-05-18 00:41:32,461 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:32,465 [ scc.git] DEBUG Check current status 2024-05-18 00:41:32,465 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:32,469 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-18 00:41:32,469 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:32,518 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-18 00:41:32,520 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-18 00:41:32,523 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-18 00:41:32,526 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-18 00:41:32,853 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-18 00:41:32,856 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-18 00:41:32,859 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-18 00:41:32,953 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-18 00:41:32,957 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-18 00:41:32,960 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-18 00:41:32,963 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-18 00:41:32,966 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-18 00:41:32,970 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-18 00:41:32,973 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-18 00:41:32,976 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-18 00:41:32,979 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-18 00:41:32,982 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-18 00:41:32,985 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-18 00:41:32,987 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-18 00:41:32,990 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-18 00:41:32,993 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-18 00:41:32,997 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-18 00:41:33,002 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:33,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-18 00:41:33,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:34,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:34,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:34,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:34,969 [ scc.git] DEBUG Resetting... 2024-05-18 00:41:34,969 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-18 00:41:34,979 [ scc.git] DEBUG HEAD is now at b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-18 00:41:34,979 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-18 00:41:35,082 [ scc.git] DEBUG Check current status 2024-05-18 00:41:35,082 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:35,088 [ scc.git] DEBUG b5c2ee8 Merge pull request #369 from ome/dependabot/submodules/omero-figure-3d9e3b8 2024-05-18 00:41:35,088 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:35,137 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-18 00:41:35,139 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-18 00:41:35,142 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-18 00:41:35,145 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-18 00:41:35,152 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-18 00:41:35,155 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-18 00:41:35,158 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-18 00:41:35,162 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-18 00:41:35,165 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-18 00:41:35,168 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-18 00:41:35,171 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-18 00:41:35,174 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-18 00:41:35,177 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-18 00:41:35,180 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-18 00:41:35,184 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-18 00:41:35,187 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-18 00:41:35,190 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-18 00:41:35,192 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-18 00:41:35,195 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-18 00:41:35,197 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-18 00:41:35,200 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-18 00:41:35,204 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-18 00:41:35,205 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-18 00:41:35,205 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-18 00:41:35,205 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-18 00:41:35,205 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-18 00:41:35,205 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-18 00:41:35,205 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:41:35,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-18 00:41:35,419 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:41:35,419 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:41:35,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:41:35,442 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:41:35,446 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:41:35,447 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:41:35,451 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:41:35,455 [ scc.git] DEBUG Already up to date. 2024-05-18 00:41:35,455 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:41:35,455 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:41:35,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:41:35,459 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:41:35,509 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:41:35,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:41:35,514 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:41:36,532 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f50db300460> has no local changes 2024-05-18 00:41:36,532 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:41:36,610 [ scc.git] DEBUG [detached HEAD 4dcdf08] merge master -Dorg -Snone 2024-05-18 00:41:36,611 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-18 00:41:36,611 [ scc.merge] INFO Already up to date. 2024-05-18 00:41:36,611 [ scc.merge] INFO 2024-05-18 00:41:36,611 [ scc.merge] INFO 2024-05-18 00:41:36,611 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-18 00:41:36,611 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-05-18 00:41:45,899 [ scc.config] DEBUG Found github.token 2024-05-18 00:41:45,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-05-18 00:41:46,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:41:46,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:41:46,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-05-18 00:41:46,936 [ scc.gh] DEBUG 2336 remaining from 5000 (Reset at 00:05 2024-05-18 00:41:46,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:46,942 [ scc.git] DEBUG Check current status 2024-05-18 00:41:46,942 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:46,945 [ scc.git] DEBUG 4dcdf08 merge master -Dorg -Snone 2024-05-18 00:41:46,946 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:46,990 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-18 00:41:46,992 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-18 00:41:46,995 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-18 00:41:46,997 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-18 00:41:47,004 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-18 00:41:47,007 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-18 00:41:47,009 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-18 00:41:47,013 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-18 00:41:47,016 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-18 00:41:47,018 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-18 00:41:47,021 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-18 00:41:47,023 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-18 00:41:47,026 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-18 00:41:47,029 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-18 00:41:47,032 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-18 00:41:47,034 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-18 00:41:47,037 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-18 00:41:47,039 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-18 00:41:47,041 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-18 00:41:47,044 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-18 00:41:47,046 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-18 00:41:47,050 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-18 00:41:47,054 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:47,054 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-05-18 00:41:47,056 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-05-18 00:41:47,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-05-18 00:41:47,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:48,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:48,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:49,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:49,165 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:41:49,243 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-18 00:41:49,243 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:49,248 [ scc.git] DEBUG Check current status 2024-05-18 00:41:49,248 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:49,252 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-05-18 00:41:49,252 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:49,294 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:49,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-05-18 00:41:50,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:50,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:50,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:51,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:51,395 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:41:51,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:41:51,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-18 00:41:51,439 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:51,443 [ scc.git] DEBUG Check current status 2024-05-18 00:41:51,443 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:51,447 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-05-18 00:41:51,447 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:51,487 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:51,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-05-18 00:41:52,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:52,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:53,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:53,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:53,645 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:41:53,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:41:53,690 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-18 00:41:53,690 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:53,695 [ scc.git] DEBUG Check current status 2024-05-18 00:41:53,695 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:53,700 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-05-18 00:41:53,700 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:53,745 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:54,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-05-18 00:41:54,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:54,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:55,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:55,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:55,833 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:41:55,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:41:55,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-18 00:41:55,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:55,884 [ scc.git] DEBUG Check current status 2024-05-18 00:41:55,884 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:55,888 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-18 00:41:55,888 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:55,937 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:56,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-05-18 00:41:56,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:57,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:57,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:41:58,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:41:58,033 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:41:58,075 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:41:58,076 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-18 00:41:58,076 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:41:58,081 [ scc.git] DEBUG Check current status 2024-05-18 00:41:58,081 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:41:58,136 [ scc.git] DEBUG 3d9e3b87 Merge pull request #554 from jburel/update_publish 2024-05-18 00:41:58,136 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:41:58,182 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:41:58,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-05-18 00:41:58,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:41:59,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:41:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:00,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:00,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:00,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:00,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-18 00:42:00,216 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:00,221 [ scc.git] DEBUG Check current status 2024-05-18 00:42:00,221 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:00,225 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-18 00:42:00,225 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:00,266 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:00,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-05-18 00:42:01,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:01,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:01,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:02,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:02,393 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:02,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:02,436 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-18 00:42:02,436 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:02,441 [ scc.git] DEBUG Check current status 2024-05-18 00:42:02,441 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:02,446 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-05-18 00:42:02,446 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:02,493 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:02,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-05-18 00:42:03,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:03,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:04,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:04,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:04,584 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:04,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:04,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-18 00:42:04,630 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:04,634 [ scc.git] DEBUG Check current status 2024-05-18 00:42:04,635 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:04,639 [ scc.git] DEBUG 54c3753 Merge pull request #470 from will-moore/movie_playing_waits_for_planes 2024-05-18 00:42:04,639 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:04,685 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:05,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-05-18 00:42:05,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:05,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:06,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:06,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:06,792 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:06,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:06,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-18 00:42:06,835 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:06,839 [ scc.git] DEBUG Check current status 2024-05-18 00:42:06,839 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:06,843 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-05-18 00:42:06,843 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:06,885 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:07,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-05-18 00:42:07,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:08,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:08,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:08,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:09,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:09,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:09,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-18 00:42:09,050 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:09,055 [ scc.git] DEBUG Check current status 2024-05-18 00:42:09,055 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:09,060 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-18 00:42:09,060 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:09,107 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:09,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-05-18 00:42:09,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:10,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:10,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:11,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:11,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:11,258 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:11,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-18 00:42:11,260 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:11,270 [ scc.git] DEBUG Check current status 2024-05-18 00:42:11,270 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:11,279 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-05-18 00:42:11,280 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:11,336 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:11,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-05-18 00:42:12,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:12,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:12,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:13,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:13,384 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:13,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:13,430 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-18 00:42:13,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:13,436 [ scc.git] DEBUG Check current status 2024-05-18 00:42:13,436 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:13,443 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-05-18 00:42:13,443 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:13,501 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:13,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-05-18 00:42:14,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:14,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:15,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:15,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:15,599 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:15,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:15,645 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-18 00:42:15,646 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:15,652 [ scc.git] DEBUG Check current status 2024-05-18 00:42:15,652 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:15,659 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-05-18 00:42:15,659 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:15,712 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:16,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-05-18 00:42:16,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:16,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:17,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:17,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:17,802 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:17,846 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:17,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-18 00:42:17,847 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:17,853 [ scc.git] DEBUG Check current status 2024-05-18 00:42:17,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:17,858 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-18 00:42:17,859 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:17,908 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:18,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-05-18 00:42:18,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:19,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:19,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:20,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:20,029 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:20,071 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:20,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-18 00:42:20,073 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:20,078 [ scc.git] DEBUG Check current status 2024-05-18 00:42:20,078 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:20,082 [ scc.git] DEBUG a0148a6 Merge pull request #68 from sbesson/pytest 2024-05-18 00:42:20,082 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:20,129 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:20,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-18 00:42:20,457 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-18 00:42:20,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-05-18 00:42:21,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:21,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:21,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:22,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:22,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:22,477 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:22,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-18 00:42:22,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:22,483 [ scc.git] DEBUG Check current status 2024-05-18 00:42:22,483 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:22,488 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-05-18 00:42:22,489 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:22,536 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:22,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-05-18 00:42:23,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:23,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:24,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:24,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:24,651 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:24,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:24,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-18 00:42:24,694 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:24,700 [ scc.git] DEBUG Check current status 2024-05-18 00:42:24,700 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:24,706 [ scc.git] DEBUG deab817 update setup-python to v4 2024-05-18 00:42:24,706 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:24,756 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:25,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-05-18 00:42:25,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:26,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:26,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:26,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:26,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:26,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:26,879 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-18 00:42:26,879 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:26,885 [ scc.git] DEBUG Check current status 2024-05-18 00:42:26,885 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:26,890 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-18 00:42:26,890 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:26,937 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:26,937 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-05-18 00:42:27,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-05-18 00:42:27,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:28,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:28,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:29,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:29,001 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:29,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:29,040 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-18 00:42:29,040 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:29,045 [ scc.git] DEBUG Check current status 2024-05-18 00:42:29,045 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:29,050 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-05-18 00:42:29,051 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:29,096 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:29,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-18 00:42:29,431 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-18 00:42:29,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-05-18 00:42:30,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:30,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:30,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:31,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:31,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:31,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:31,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-18 00:42:31,397 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:31,403 [ scc.git] DEBUG Check current status 2024-05-18 00:42:31,403 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:31,409 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-05-18 00:42:31,410 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:31,471 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:31,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-18 00:42:31,770 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-18 00:42:31,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-05-18 00:42:32,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:32,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:33,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:33,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:33,738 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:33,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:33,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-18 00:42:33,798 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:33,804 [ scc.git] DEBUG Check current status 2024-05-18 00:42:33,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:33,812 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-18 00:42:33,813 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:33,870 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:34,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-05-18 00:42:34,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:35,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:35,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:35,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:35,992 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:36,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:36,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-18 00:42:36,038 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-05-18 00:42:36,046 [ scc.git] DEBUG Check current status 2024-05-18 00:42:36,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:36,066 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-18 00:42:36,066 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:36,115 [ scc.config] DEBUG Found remote.origin.url 2024-05-18 00:42:36,116 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-05-18 00:42:36,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-18 00:42:36,405 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-18 00:42:36,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-05-18 00:42:37,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-05-18 00:42:37,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-05-18 00:42:37,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:38,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-05-18 00:42:38,358 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:38,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:38,404 [ scc.git] DEBUG Resetting... 2024-05-18 00:42:38,404 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-05-18 00:42:38,418 [ scc.git] DEBUG HEAD is now at 4dcdf08 merge master -Dorg -Snone 2024-05-18 00:42:38,419 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-05-18 00:42:38,527 [ scc.git] DEBUG Check current status 2024-05-18 00:42:38,527 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-05-18 00:42:38,535 [ scc.git] DEBUG 4dcdf08 merge master -Dorg -Snone 2024-05-18 00:42:38,536 [ scc.git] DEBUG Calling 'git submodule status' 2024-05-18 00:42:38,589 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-05-18 00:42:38,592 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-05-18 00:42:38,595 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-05-18 00:42:38,598 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-05-18 00:42:38,606 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-05-18 00:42:38,608 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-05-18 00:42:38,612 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-05-18 00:42:38,615 [ scc.git] DEBUG 54c375382684c1da08b9f29eb129c92773913730 omero-iviewer (v0.13.0-40-g54c3753) 2024-05-18 00:42:38,619 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-05-18 00:42:38,623 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-05-18 00:42:38,626 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-05-18 00:42:38,629 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-05-18 00:42:38,633 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-05-18 00:42:38,636 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-05-18 00:42:38,640 [ scc.git] DEBUG a0148a60126315b011e74c4d28826d63610e4c97 omero-test-infra (v0.6.3-55-ga0148a6) 2024-05-18 00:42:38,643 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-05-18 00:42:38,647 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-05-18 00:42:38,650 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-05-18 00:42:38,654 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-05-18 00:42:38,657 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-05-18 00:42:38,662 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-05-18 00:42:38,666 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-05-18 00:42:38,667 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-05-18 00:42:38,667 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-05-18 00:42:38,667 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-05-18 00:42:38,667 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-05-18 00:42:38,667 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-05-18 00:42:38,667 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-05-18 00:42:38,668 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:42:38,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 2 2024-05-18 00:42:38,846 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:42:38,846 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:38,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:38,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:42:38,858 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:42:38,858 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:42:38,864 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:42:38,872 [ scc.git] DEBUG Already up to date. 2024-05-18 00:42:38,872 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:42:38,872 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:38,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:38,880 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:42:38,941 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:38,942 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:38,950 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:42:39,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-05-18 00:42:39,281 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:42:39,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-18 00:42:39,281 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:39,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:39,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:42:39,297 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:42:39,298 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:42:39,305 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:42:39,311 [ scc.git] DEBUG Already up to date. 2024-05-18 00:42:39,312 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:42:39,312 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:39,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:39,319 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:42:39,365 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:39,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:39,371 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:39,416 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:42:39,424 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc81cb0d0> has no local changes 2024-05-18 00:42:39,424 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:42:39,440 [ scc.git] DEBUG [detached HEAD d1371d6] merge master -Dorg -Ssuccess-only 2024-05-18 00:42:39,440 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:39,441 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:42:39,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-05-18 00:42:40,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-05-18 00:42:40,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-05-18 00:42:41,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-18 00:42:41,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:42:42,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:42:42,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-05-18 00:42:42,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:42:42,924 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-05-18 00:42:43,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-05-18 00:42:43,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-05-18 00:42:43,873 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:42:43,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-18 00:42:43,873 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:43,873 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:43,880 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:42:43,888 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:42:43,888 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:42:43,895 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:42:43,903 [ scc.git] DEBUG Already up to date. 2024-05-18 00:42:43,903 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-05-18 00:42:44,324 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-05-18 00:42:44,324 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-05-18 00:42:44,329 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:42:44,329 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:44,329 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:44,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-18 00:42:44,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:44,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-05-18 00:42:44,393 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:42:44,395 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-05-18 00:42:44,395 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-05-18 00:42:44,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:42:44,575 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:42:44,620 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:44,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:44,626 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:44,669 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:42:44,676 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc819ffd0> has no local changes 2024-05-18 00:42:44,677 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:42:44,686 [ scc.git] DEBUG [detached HEAD 1f5f039] merge master -Dorg -Ssuccess-only 2024-05-18 00:42:44,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:44,687 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:42:45,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-05-18 00:42:45,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-05-18 00:42:46,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-05-18 00:42:46,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-05-18 00:42:46,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-05-18 00:42:47,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-18 00:42:47,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:42:48,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-05-18 00:42:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:42:48,815 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-05-18 00:42:49,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-05-18 00:42:49,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-05-18 00:42:50,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-05-18 00:42:50,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-05-18 00:42:51,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-05-18 00:42:51,110 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:42:51,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-18 00:42:51,110 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:51,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:51,116 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:42:51,120 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:42:51,121 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:42:51,126 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:42:51,132 [ scc.git] DEBUG Already up to date. 2024-05-18 00:42:51,132 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-05-18 00:42:51,512 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-05-18 00:42:51,513 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-05-18 00:42:51,518 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:42:51,518 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:51,518 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:51,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-18 00:42:51,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:51,537 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-05-18 00:42:51,549 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:42:51,552 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-05-18 00:42:51,552 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-05-18 00:42:51,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:42:51,716 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:42:51,817 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:42:51,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:42:51,826 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:42:51,910 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:42:51,920 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70e7f40> has no local changes 2024-05-18 00:42:51,920 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:42:51,933 [ scc.git] DEBUG [detached HEAD 6ca914b] merge master -Dorg -Ssuccess-only 2024-05-18 00:42:51,934 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:42:51,935 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:42:52,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-05-18 00:42:52,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-05-18 00:42:53,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-05-18 00:42:53,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-05-18 00:42:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-18 00:42:54,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:42:55,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:42:55,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-18 00:42:55,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-05-18 00:42:56,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-05-18 00:42:56,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-05-18 00:42:56,790 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-05-18 00:42:57,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-05-18 00:42:57,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-05-18 00:42:58,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-05-18 00:42:58,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-18 00:42:59,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:42:59,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-05-18 00:43:00,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:00,052 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-18 00:43:00,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-05-18 00:43:00,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-05-18 00:43:01,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-05-18 00:43:01,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-18 00:43:02,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:02,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-05-18 00:43:03,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:03,259 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-05-18 00:43:03,260 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:03,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-18 00:43:03,260 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:03,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:03,266 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:03,271 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:03,272 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:03,277 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:03,282 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:03,283 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-05-18 00:43:03,859 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-18 00:43:03,859 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-05-18 00:43:03,865 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-05-18 00:43:04,287 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-18 00:43:04,288 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-05-18 00:43:04,293 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-05-18 00:43:04,650 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-05-18 00:43:04,650 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-05-18 00:43:04,654 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:04,655 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:04,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:04,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-18 00:43:04,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:04,673 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-18 00:43:04,686 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-18 00:43:04,686 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-18 00:43:04,686 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-18 00:43:04,686 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:43:04,686 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:43:04,692 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-18 00:43:04,698 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-18 00:43:04,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:04,861 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-05-18 00:43:04,870 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-18 00:43:04,877 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-05-18 00:43:04,883 [ scc.config] DEBUG Found github.token 2024-05-18 00:43:04,883 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-05-18 00:43:04,883 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-18 00:43:04,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:04,894 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-18 00:43:04,906 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-05-18 00:43:04,906 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-05-18 00:43:04,906 [ scc.git] DEBUG Auto-merging setup.py 2024-05-18 00:43:04,906 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-05-18 00:43:04,906 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-18 00:43:04,906 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-05-18 00:43:04,906 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-05-18 00:43:04,907 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:43:04,907 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:43:04,912 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-18 00:43:04,919 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-05-18 00:43:05,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:05,325 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-05-18 00:43:05,332 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-05-18 00:43:05,337 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - src/omero_zarr/raw_pixels.py - .isort.cfg --conflicts 2024-05-18 00:43:05,342 [ scc.config] DEBUG Found github.token 2024-05-18 00:43:05,342 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-05-18 00:43:05,342 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-18 00:43:05,348 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:05,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-05-18 00:43:05,406 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-05-18 00:43:05,406 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-05-18 00:43:05,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:05,410 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-05-18 00:43:05,410 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-05-18 00:43:05,410 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-05-18 00:43:05,410 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-05-18 00:43:05,410 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-05-18 00:43:05,410 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-05-18 00:43:05,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:05,742 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:05,785 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:05,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:05,791 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:05,839 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:05,846 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70ad640> has no local changes 2024-05-18 00:43:05,847 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:05,856 [ scc.git] DEBUG [detached HEAD ac9e1e6] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:05,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:05,857 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:06,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-05-18 00:43:06,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None 2024-05-18 00:43:07,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-18 00:43:07,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:08,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:08,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None 2024-05-18 00:43:09,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0c814d66251860ddb01c00ade8469e45f7a1be23?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:09,058 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-18 00:43:09,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None 2024-05-18 00:43:10,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None 2024-05-18 00:43:10,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919 HTTP/1.1" 200 None 2024-05-18 00:43:10,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:11,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:11,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-05-18 00:43:12,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-05-18 00:43:12,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-18 00:43:13,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:13,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:14,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-05-18 00:43:14,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:14,605 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-05-18 00:43:15,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-05-18 00:43:15,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-18 00:43:16,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:16,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:16,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-05-18 00:43:17,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:17,357 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-05-18 00:43:17,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None 2024-05-18 00:43:18,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None 2024-05-18 00:43:18,285 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:18,285 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-18 00:43:18,285 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:18,285 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:18,293 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:18,299 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:18,299 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:18,306 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:18,313 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:18,314 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-05-18 00:43:19,490 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-18 00:43:19,490 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-05-18 00:43:19,495 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-05-18 00:43:20,282 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-18 00:43:20,282 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-05-18 00:43:20,288 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head' 2024-05-18 00:43:20,848 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-05-18 00:43:20,848 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD 2024-05-18 00:43:20,851 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:20,851 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:20,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:20,857 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-18 00:43:20,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:20,870 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-05-18 00:43:21,019 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:21,026 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-05-18 00:43:21,026 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-05-18 00:43:21,026 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-05-18 00:43:21,026 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-05-18 00:43:21,026 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-05-18 00:43:21,028 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-05-18 00:43:21,028 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-05-18 00:43:21,028 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-05-18 00:43:21,029 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-05-18 00:43:21,029 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-05-18 00:43:21,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:21,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-18 00:43:21,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:21,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-05-18 00:43:21,347 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-05-18 00:43:21,347 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-05-18 00:43:21,347 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-05-18 00:43:21,348 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:21,354 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-05-18 00:43:21,354 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-05-18 00:43:21,354 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-05-18 00:43:21,355 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-05-18 00:43:21,355 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-05-18 00:43:21,355 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-05-18 00:43:21,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:21,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-18 00:43:21,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:21,602 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 0c814d66251860ddb01c00ade8469e45f7a1be23' 2024-05-18 00:43:21,619 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:21,622 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++ 2024-05-18 00:43:21,622 [ scc.git] DEBUG 1 file changed, 10 insertions(+) 2024-05-18 00:43:21,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:21,989 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:22,034 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:22,034 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:22,040 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:22,080 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:22,089 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc7106be0> has no local changes 2024-05-18 00:43:22,089 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (status: failure) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:22,099 [ scc.git] DEBUG [detached HEAD aff5da05] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:22,099 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:22,099 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:22,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-05-18 00:43:22,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-05-18 00:43:23,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-05-18 00:43:23,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-18 00:43:24,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:24,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-05-18 00:43:25,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:25,283 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-05-18 00:43:25,283 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:25,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-18 00:43:25,283 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:25,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:25,289 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:25,295 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:25,295 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:25,302 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:25,308 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:25,309 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-05-18 00:43:25,668 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-05-18 00:43:25,669 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-05-18 00:43:25,673 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:25,673 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:25,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:25,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-18 00:43:25,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:25,692 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-05-18 00:43:25,730 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-05-18 00:43:25,731 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:25,733 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-05-18 00:43:25,733 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-05-18 00:43:25,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:25,891 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:25,934 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:25,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:25,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:25,982 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:25,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70bd550> has no local changes 2024-05-18 00:43:25,988 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:25,998 [ scc.git] DEBUG [detached HEAD 8920bad] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:25,998 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:25,998 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:26,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-05-18 00:43:26,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-05-18 00:43:26,828 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-18 00:43:27,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-18 00:43:27,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:28,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:28,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-05-18 00:43:29,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:29,251 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-18 00:43:29,252 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:29,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-18 00:43:29,252 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:29,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:29,258 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:29,264 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:29,264 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:29,270 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:29,276 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:29,277 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-05-18 00:43:29,646 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-05-18 00:43:29,647 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-05-18 00:43:29,652 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:29,652 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:29,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:29,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-18 00:43:29,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:29,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-05-18 00:43:29,684 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:29,688 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-05-18 00:43:29,689 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-05-18 00:43:29,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:29,852 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:29,897 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:29,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:29,904 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:29,947 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:29,957 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70c5820> has no local changes 2024-05-18 00:43:29,958 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:29,969 [ scc.git] DEBUG [detached HEAD 88c44e0] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:29,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:29,970 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:30,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-05-18 00:43:30,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/475 HTTP/1.1" 200 None 2024-05-18 00:43:31,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f HTTP/1.1" 200 None 2024-05-18 00:43:31,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:32,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:32,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f HTTP/1.1" 200 None 2024-05-18 00:43:33,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/4a89dc6f0646b38c9c91d5f15003dcabad5c479f?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:33,071 [ scc.repo] DEBUG - PR 475 will-moore 'Update build and publish in gha' 2024-05-18 00:43:33,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-05-18 00:43:34,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-05-18 00:43:34,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-18 00:43:34,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:35,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:35,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-05-18 00:43:36,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:36,255 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-18 00:43:36,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None 2024-05-18 00:43:37,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469/comments HTTP/1.1" 200 None 2024-05-18 00:43:37,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None 2024-05-18 00:43:38,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:38,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:38,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None 2024-05-18 00:43:39,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0eaee155506e5851ccebed9a01799cf86ebb9f63?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:39,344 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0' 2024-05-18 00:43:39,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-05-18 00:43:40,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-05-18 00:43:40,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-18 00:43:41,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:41,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:42,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-05-18 00:43:42,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:42,592 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-05-18 00:43:43,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-05-18 00:43:43,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-05-18 00:43:43,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-18 00:43:44,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:44,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-05-18 00:43:45,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:45,270 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-05-18 00:43:45,270 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:45,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-18 00:43:45,270 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:45,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:45,277 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:45,282 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:45,282 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:45,288 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:45,294 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:45,294 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-05-18 00:43:45,684 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-18 00:43:45,684 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-05-18 00:43:45,689 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-05-18 00:43:46,119 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-18 00:43:46,119 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-05-18 00:43:46,124 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head' 2024-05-18 00:43:46,572 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-18 00:43:46,572 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD 2024-05-18 00:43:46,579 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-05-18 00:43:46,959 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-18 00:43:46,959 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-05-18 00:43:46,964 [ scc.git] DEBUG Calling 'git fetch origin pull/475/head' 2024-05-18 00:43:47,510 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-05-18 00:43:47,510 [ scc.git] DEBUG * branch refs/pull/475/head -> FETCH_HEAD 2024-05-18 00:43:47,513 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:47,513 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:47,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:47,519 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-18 00:43:47,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:47,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-05-18 00:43:47,634 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-05-18 00:43:47,635 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:47,638 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-05-18 00:43:47,639 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-05-18 00:43:47,639 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-05-18 00:43:47,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:47,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-18 00:43:47,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:47,810 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-05-18 00:43:47,828 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-05-18 00:43:47,829 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-05-18 00:43:47,829 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-05-18 00:43:47,829 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-05-18 00:43:47,829 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:47,833 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-05-18 00:43:47,833 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-05-18 00:43:47,833 [ scc.git] DEBUG src/app/header.html | 5 + 2024-05-18 00:43:47,833 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-05-18 00:43:47,833 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-05-18 00:43:47,833 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-05-18 00:43:47,833 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-05-18 00:43:47,833 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-05-18 00:43:48,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:48,204 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0eaee155506e5851ccebed9a01799cf86ebb9f63' 2024-05-18 00:43:48,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:48,216 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) 0eaee155506e5851ccebed9a01799cf86ebb9f63' 2024-05-18 00:43:48,229 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:48,232 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++- 2024-05-18 00:43:48,232 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-05-18 00:43:48,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:48,606 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-18 00:43:48,614 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:48,619 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-05-18 00:43:48,631 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-05-18 00:43:48,632 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:48,635 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-05-18 00:43:48,635 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-05-18 00:43:48,635 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-05-18 00:43:49,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:49,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4a89dc6f0646b38c9c91d5f15003dcabad5c479f' 2024-05-18 00:43:49,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:49,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 475 (Update build and publish in gha) 4a89dc6f0646b38c9c91d5f15003dcabad5c479f' 2024-05-18 00:43:49,041 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:49,044 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++--- 2024-05-18 00:43:49,044 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2024-05-18 00:43:49,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:49,424 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:49,469 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:49,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:49,476 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:49,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:49,526 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc40605b0> has no local changes 2024-05-18 00:43:49,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 471 will-moore 'Z projection disabled tooltip' - PR 475 will-moore 'Update build and publish in gha' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:49,535 [ scc.git] DEBUG [detached HEAD 7638b71] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:49,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:49,536 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:49,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-05-18 00:43:50,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-05-18 00:43:50,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-05-18 00:43:51,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-18 00:43:51,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:43:52,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-05-18 00:43:53,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:53,061 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-05-18 00:43:53,061 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:53,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-18 00:43:53,061 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:53,061 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:53,067 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:53,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:53,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:53,078 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:53,083 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:53,084 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-05-18 00:43:53,450 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-05-18 00:43:53,450 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-05-18 00:43:53,455 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:43:53,455 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:53,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:53,461 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-18 00:43:53,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:53,473 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-05-18 00:43:53,482 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:43:53,485 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-05-18 00:43:53,485 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-05-18 00:43:53,485 [ scc.git] DEBUG requirements.txt | 2 +- 2024-05-18 00:43:53,485 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-05-18 00:43:53,485 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-05-18 00:43:53,485 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-05-18 00:43:53,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:43:53,650 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:43:53,691 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:53,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:53,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:43:53,739 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:43:53,747 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70a54f0> has no local changes 2024-05-18 00:43:53,747 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:43:53,756 [ scc.git] DEBUG [detached HEAD a22dab4] merge master -Dorg -Ssuccess-only 2024-05-18 00:43:53,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:43:53,757 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:43:54,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-05-18 00:43:54,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-05-18 00:43:55,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-05-18 00:43:55,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-18 00:43:55,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:56,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-05-18 00:43:56,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:56,811 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-18 00:43:57,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-05-18 00:43:57,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-05-18 00:43:58,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-18 00:43:58,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:43:59,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-05-18 00:43:59,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:43:59,446 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-18 00:43:59,446 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:43:59,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-18 00:43:59,446 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:43:59,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:43:59,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:43:59,458 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:43:59,458 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:43:59,463 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:43:59,469 [ scc.git] DEBUG Already up to date. 2024-05-18 00:43:59,469 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-05-18 00:43:59,831 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-18 00:43:59,831 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-05-18 00:43:59,836 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-05-18 00:44:00,206 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-05-18 00:44:00,206 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-05-18 00:44:00,211 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:00,211 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:00,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:00,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-18 00:44:00,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:00,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-18 00:44:00,314 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-05-18 00:44:00,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-05-18 00:44:00,314 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-18 00:44:00,314 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-18 00:44:00,314 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:00,315 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:00,322 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-18 00:44:00,329 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-18 00:44:00,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:00,495 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-05-18 00:44:00,503 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-18 00:44:00,510 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-05-18 00:44:00,516 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:00,516 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-05-18 00:44:00,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-18 00:44:00,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:00,529 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-18 00:44:00,546 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-05-18 00:44:00,546 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-05-18 00:44:00,546 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-05-18 00:44:00,546 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:00,546 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:00,553 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-18 00:44:00,560 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-05-18 00:44:00,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:00,909 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-05-18 00:44:00,918 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-05-18 00:44:00,925 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-05-18 00:44:00,931 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:00,931 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-05-18 00:44:00,932 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:00,977 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:00,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:00,984 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:01,026 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:01,033 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc4060550> has no local changes 2024-05-18 00:44:01,034 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:01,042 [ scc.git] DEBUG [detached HEAD 095ab51] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:01,043 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:01,043 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:01,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-05-18 00:44:01,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-05-18 00:44:01,898 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-18 00:44:02,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-18 00:44:02,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:03,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:44:03,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-05-18 00:44:04,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:04,259 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-18 00:44:04,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-05-18 00:44:04,741 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-18 00:44:05,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-18 00:44:05,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:06,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:44:06,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-05-18 00:44:07,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:07,090 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-18 00:44:07,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-05-18 00:44:07,558 [ scc.repo] DEBUG # ... Include label: dependencies 2024-05-18 00:44:08,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-18 00:44:08,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:08,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:44:09,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-05-18 00:44:09,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:09,811 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-18 00:44:10,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-05-18 00:44:10,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-05-18 00:44:11,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-05-18 00:44:11,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-05-18 00:44:12,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-05-18 00:44:12,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-05-18 00:44:12,583 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:12,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-18 00:44:12,584 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:12,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:12,594 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:12,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:12,604 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:12,615 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:12,626 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:12,626 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-05-18 00:44:13,014 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-18 00:44:13,014 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-05-18 00:44:13,020 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-05-18 00:44:13,446 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-18 00:44:13,446 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-05-18 00:44:13,455 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-05-18 00:44:13,845 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-05-18 00:44:13,845 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-05-18 00:44:13,851 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:13,851 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:13,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:13,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-18 00:44:13,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:13,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-05-18 00:44:13,886 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:13,890 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-05-18 00:44:13,890 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-05-18 00:44:14,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:14,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-18 00:44:14,050 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:14,057 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-05-18 00:44:14,070 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-18 00:44:14,071 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:14,074 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-05-18 00:44:14,074 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-05-18 00:44:14,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:14,452 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-18 00:44:14,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:14,466 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-05-18 00:44:14,480 [ scc.git] DEBUG Auto-merging package-lock.json 2024-05-18 00:44:14,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:14,485 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-05-18 00:44:14,485 [ scc.git] DEBUG package.json | 2 +- 2024-05-18 00:44:14,485 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-05-18 00:44:14,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:14,873 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:14,926 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:14,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:14,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:14,977 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:14,985 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc7098fd0> has no local changes 2024-05-18 00:44:14,985 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:14,996 [ scc.git] DEBUG [detached HEAD 90daeeb] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:14,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:14,997 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:15,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-05-18 00:44:15,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-05-18 00:44:16,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-18 00:44:16,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:17,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-05-18 00:44:17,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:17,689 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-05-18 00:44:17,689 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:17,689 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-18 00:44:17,689 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:17,689 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:17,695 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:17,701 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:17,701 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:17,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:17,714 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:17,714 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-18 00:44:18,145 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-05-18 00:44:18,145 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-18 00:44:18,151 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:18,152 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:18,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:18,158 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-18 00:44:18,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:18,171 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-05-18 00:44:18,182 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:18,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:18,332 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:18,375 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:18,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:18,382 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:18,424 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:18,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc4029340> has no local changes 2024-05-18 00:44:18,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:18,441 [ scc.git] DEBUG [detached HEAD 15c8efd] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:18,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:18,442 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:18,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-05-18 00:44:19,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-05-18 00:44:19,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-05-18 00:44:20,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-05-18 00:44:20,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-18 00:44:21,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:21,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-05-18 00:44:22,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:22,037 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-18 00:44:22,037 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:22,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-18 00:44:22,038 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:22,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:22,045 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:22,052 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:22,053 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:22,061 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:22,069 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:22,069 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-05-18 00:44:22,484 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-05-18 00:44:22,484 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-05-18 00:44:22,489 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:22,489 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:22,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:22,497 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-18 00:44:22,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:22,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-05-18 00:44:22,523 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-05-18 00:44:22,524 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:22,527 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-05-18 00:44:22,527 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-05-18 00:44:22,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:22,689 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:22,739 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:22,740 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:22,748 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:22,794 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:22,802 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc40755b0> has no local changes 2024-05-18 00:44:22,802 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:22,813 [ scc.git] DEBUG [detached HEAD b666124] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:22,814 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:22,814 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:23,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-05-18 00:44:23,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-05-18 00:44:24,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-05-18 00:44:24,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-18 00:44:25,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:25,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-05-18 00:44:25,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:25,881 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-18 00:44:25,881 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:25,881 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-18 00:44:25,882 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:25,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:25,888 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:25,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:25,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:25,899 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:25,905 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:25,906 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-05-18 00:44:26,284 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-05-18 00:44:26,284 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-05-18 00:44:26,289 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:26,289 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:26,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:26,297 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-18 00:44:26,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:26,311 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-18 00:44:26,417 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-05-18 00:44:26,417 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-05-18 00:44:26,417 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG Auto-merging setup.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-05-18 00:44:26,418 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:26,418 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:26,425 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-18 00:44:26,434 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-05-18 00:44:26,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:26,630 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-05-18 00:44:26,638 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-05-18 00:44:26,647 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/urls.py - omero_signup/signup_settings.py - omero_signup/views.py - setup.py --conflicts 2024-05-18 00:44:26,654 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:26,655 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-05-18 00:44:26,655 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:26,698 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:26,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:26,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:26,755 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:26,764 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc70c5df0> has no local changes 2024-05-18 00:44:26,765 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:26,776 [ scc.git] DEBUG [detached HEAD d62cd0d] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:26,777 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:26,777 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:27,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-05-18 00:44:27,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-05-18 00:44:28,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-05-18 00:44:28,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-18 00:44:28,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:29,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-05-18 00:44:29,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:29,833 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-18 00:44:29,833 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:29,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-18 00:44:29,833 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:29,833 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:29,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:29,845 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:29,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:29,853 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:29,861 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:29,861 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-05-18 00:44:30,239 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-05-18 00:44:30,240 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-05-18 00:44:30,245 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:30,245 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:30,245 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:30,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-05-18 00:44:30,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:30,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-05-18 00:44:30,347 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-05-18 00:44:30,350 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-05-18 00:44:30,351 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-05-18 00:44:30,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-05-18 00:44:30,352 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-05-18 00:44:30,352 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-05-18 00:44:30,353 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-05-18 00:44:30,353 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-05-18 00:44:30,353 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-05-18 00:44:30,353 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-05-18 00:44:30,353 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-05-18 00:44:30,353 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-05-18 00:44:30,353 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-05-18 00:44:30,353 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-05-18 00:44:30,353 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-05-18 00:44:30,353 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-05-18 00:44:30,353 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-05-18 00:44:30,354 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-05-18 00:44:30,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:30,514 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:30,558 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:30,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:30,567 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:30,611 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:30,619 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc7098df0> has no local changes 2024-05-18 00:44:30,620 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:30,630 [ scc.git] DEBUG [detached HEAD 770b07f] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:30,631 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:30,631 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:30,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-05-18 00:44:30,948 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:30,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-18 00:44:30,948 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:30,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:30,957 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:30,965 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:30,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:30,974 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:30,984 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:30,984 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:30,984 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:30,984 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:30,993 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:31,045 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:31,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:31,055 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:31,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:31,118 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc405efa0> has no local changes 2024-05-18 00:44:31,118 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:31,133 [ scc.git] DEBUG [detached HEAD ade0102] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:31,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:31,134 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:31,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-05-18 00:44:31,371 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:31,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-18 00:44:31,371 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:31,371 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:31,378 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:31,383 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:31,383 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:31,390 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:31,398 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:31,398 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:31,398 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:31,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:31,405 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:31,448 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:31,448 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:31,455 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:31,498 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:31,507 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc4040f70> has no local changes 2024-05-18 00:44:31,507 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:31,516 [ scc.git] DEBUG [detached HEAD fa151f0] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:31,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:31,517 [ scc.git] INFO Overriding base-branch from master to main 2024-05-18 00:44:31,517 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:31,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-05-18 00:44:32,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-05-18 00:44:32,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-05-18 00:44:33,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-05-18 00:44:33,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-18 00:44:34,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:34,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-05-18 00:44:35,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-05-18 00:44:35,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:35,492 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-18 00:44:35,493 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:35,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-18 00:44:35,494 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:35,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:35,510 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-05-18 00:44:35,522 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:35,522 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-05-18 00:44:35,533 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-05-18 00:44:35,548 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:35,549 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-05-18 00:44:35,944 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-05-18 00:44:35,944 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-05-18 00:44:35,957 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:35,958 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:35,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:35,970 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-18 00:44:35,983 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:35,999 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-18 00:44:36,025 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-05-18 00:44:36,026 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-05-18 00:44:36,026 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:36,026 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:36,042 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-18 00:44:36,067 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-05-18 00:44:36,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:36,234 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-05-18 00:44:36,246 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-05-18 00:44:36,258 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-05-18 00:44:36,270 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:36,271 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-05-18 00:44:36,271 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:36,349 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:36,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:36,362 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:36,426 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:36,435 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfa47f4190> has no local changes 2024-05-18 00:44:36,435 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:36,453 [ scc.git] DEBUG [detached HEAD 31b25d3] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:36,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:36,455 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:36,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-05-18 00:44:36,652 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:36,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-18 00:44:36,652 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:36,652 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:36,665 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:36,680 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:36,681 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:36,694 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:36,707 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:36,707 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:36,707 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:36,708 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:36,720 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:36,796 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:36,796 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:36,808 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:36,881 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:36,895 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfc400ee50> has no local changes 2024-05-18 00:44:36,896 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:36,912 [ scc.git] DEBUG [detached HEAD e5d96bc] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:36,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:36,914 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:37,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-05-18 00:44:37,093 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:37,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-18 00:44:37,093 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:37,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:37,107 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:37,117 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:37,118 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:37,132 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:37,147 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:37,148 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:37,148 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:37,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:37,162 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:37,249 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:37,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:37,266 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:37,356 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:37,374 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfa473c940> has no local changes 2024-05-18 00:44:37,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:37,393 [ scc.git] DEBUG [detached HEAD cf0b4cb] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:37,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:37,395 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:37,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-05-18 00:44:38,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-05-18 00:44:38,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-05-18 00:44:38,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-18 00:44:39,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:40,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-05-18 00:44:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:40,429 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-05-18 00:44:40,429 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:40,429 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-18 00:44:40,429 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:40,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:40,436 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-05-18 00:44:40,443 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:40,443 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-05-18 00:44:40,449 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-05-18 00:44:40,457 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:40,457 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-05-18 00:44:40,857 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-05-18 00:44:40,857 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-05-18 00:44:40,863 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:40,864 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:40,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:40,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-18 00:44:40,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:40,887 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-18 00:44:40,916 [ scc.git] DEBUG Auto-merging Dockerfile 2024-05-18 00:44:40,916 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-05-18 00:44:40,916 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:40,917 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:40,942 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-18 00:44:40,955 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-05-18 00:44:41,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:41,113 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-05-18 00:44:41,119 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-05-18 00:44:41,127 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-05-18 00:44:41,133 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:41,133 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-05-18 00:44:41,133 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:41,178 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:41,178 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:41,185 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:41,231 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:41,239 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfa47a1310> has no local changes 2024-05-18 00:44:41,240 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:41,250 [ scc.git] DEBUG [detached HEAD 320eee8] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:41,250 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:41,250 [ scc.git] INFO Overriding base-branch from master to develop 2024-05-18 00:44:41,251 [ scc.repo] DEBUG ## PRs found: 2024-05-18 00:44:41,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-05-18 00:44:42,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-05-18 00:44:42,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-05-18 00:44:43,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-05-18 00:44:43,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-05-18 00:44:44,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-05-18 00:44:44,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-05-18 00:44:44,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-18 00:44:45,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-05-18 00:44:45,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-05-18 00:44:46,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-05-18 00:44:46,239 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-18 00:44:46,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-05-18 00:44:47,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-05-18 00:44:47,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-05-18 00:44:48,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-05-18 00:44:48,193 [ scc.repo] DEBUG ## Branches found: 2024-05-18 00:44:48,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-18 00:44:48,194 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:48,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:48,206 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-05-18 00:44:48,214 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-05-18 00:44:48,214 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-05-18 00:44:48,222 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-05-18 00:44:48,230 [ scc.git] DEBUG Already up to date. 2024-05-18 00:44:48,230 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-05-18 00:44:48,667 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-05-18 00:44:48,668 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-05-18 00:44:48,686 [ scc.git] DEBUG ## Unique users: [] 2024-05-18 00:44:48,687 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:48,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:48,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:44:48,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:48,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:44:48,795 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-05-18 00:44:48,795 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-05-18 00:44:48,795 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-05-18 00:44:48,796 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-05-18 00:44:48,813 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-18 00:44:48,829 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-05-18 00:44:48,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:49,006 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-05-18 00:44:49,029 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-05-18 00:44:49,044 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#69](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-05-18 00:44:49,057 [ scc.config] DEBUG Found github.token 2024-05-18 00:44:49,058 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-05-18 00:44:49,058 [ scc.git] DEBUG Calling 'git submodule update' 2024-05-18 00:44:49,154 [ scc.git] DEBUG Get sha1 of %s 2024-05-18 00:44:49,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-05-18 00:44:49,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:49,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:49,260 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfa473cbb0> has no local changes 2024-05-18 00:44:49,260 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:49,276 [ scc.git] DEBUG [detached HEAD fa7ee66] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:49,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:49,277 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-05-18 00:44:49,403 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-05-18 00:44:49,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:49,585 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-05-18 00:44:49,598 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-05-18 00:44:49,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:50,011 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-05-18 00:44:50,024 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-05-18 00:44:50,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:50,408 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-05-18 00:44:50,419 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-05-18 00:44:50,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:50,833 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-05-18 00:44:51,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:51,249 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-05-18 00:44:51,270 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-05-18 00:44:51,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:51,653 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-05-18 00:44:51,663 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-05-18 00:44:52,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:52,096 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-05-18 00:44:52,112 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-05-18 00:44:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:52,498 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-05-18 00:44:52,513 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-05-18 00:44:52,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:52,914 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-05-18 00:44:52,924 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-05-18 00:44:53,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:53,332 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-05-18 00:44:53,342 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-05-18 00:44:53,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:53,737 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-05-18 00:44:53,746 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-05-18 00:44:54,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:54,151 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-05-18 00:44:54,162 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-05-18 00:44:54,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:54,564 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-05-18 00:44:54,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:54,974 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-05-18 00:44:55,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:55,377 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-05-18 00:44:55,384 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-05-18 00:44:55,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:55,802 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-05-18 00:44:56,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:56,224 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-05-18 00:44:56,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:56,622 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-05-18 00:44:56,630 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-05-18 00:44:57,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:57,065 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-05-18 00:44:57,072 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-05-18 00:44:57,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:57,436 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-05-18 00:44:57,448 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-05-18 00:44:57,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:57,872 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-05-18 00:44:57,888 [ scc.config] DEBUG Found submodule.scripts.url 2024-05-18 00:44:58,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-05-18 00:44:58,303 [ scc.config] DEBUG Found submodule.scripts.branch 2024-05-18 00:44:58,304 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-05-18 00:44:58,393 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fbfca574460> has local changes 2024-05-18 00:44:58,393 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (status: failure) - PR 543 will-moore 'Plate well labels' (stage: draft) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' - PR 562 will-moore 'Add changelog 7.0.0' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 469 will-moore 'changelog 0.14.0' - PR 471 will-moore 'Z projection disabled tooltip' - PR 475 will-moore 'Update build and publish in gha' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#69 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/69/)' 2024-05-18 00:44:58,409 [ scc.git] DEBUG [detached HEAD 777fab3] merge master -Dorg -Ssuccess-only 2024-05-18 00:44:58,409 [ scc.merge] INFO Repository: ome/omero-plugins 2024-05-18 00:44:58,409 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-05-18 00:44:58,409 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,409 [ scc.merge] INFO 2024-05-18 00:44:58,409 [ scc.merge] INFO 2024-05-18 00:44:58,409 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-05-18 00:44:58,409 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,409 [ scc.merge] INFO 2024-05-18 00:44:58,409 [ scc.merge] INFO 2024-05-18 00:44:58,409 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-05-18 00:44:58,409 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,409 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-05-18 00:44:58,409 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,409 [ scc.merge] INFO 2024-05-18 00:44:58,409 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-05-18 00:44:58,410 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-05-18 00:44:58,410 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Repository: ome/omero-figure 2024-05-18 00:44:58,410 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (status: failure) 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft) 2024-05-18 00:44:58,410 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,410 [ scc.merge] INFO 2024-05-18 00:44:58,410 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-05-18 00:44:58,410 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0' 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-05-18 00:44:58,411 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Repository: ome/omero-gallery 2024-05-18 00:44:58,411 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-05-18 00:44:58,411 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-05-18 00:44:58,411 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0' 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 475 will-moore 'Update build and publish in gha' 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Repository: ome/omero-mapr 2024-05-18 00:44:58,411 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-05-18 00:44:58,411 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,411 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-05-18 00:44:58,411 [ scc.merge] INFO 2024-05-18 00:44:58,411 [ scc.merge] INFO Repository: ome/omero-metadata 2024-05-18 00:44:58,412 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Repository: ome/omero-parade 2024-05-18 00:44:58,412 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-05-18 00:44:58,412 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-05-18 00:44:58,412 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Repository: ome/omero-rois 2024-05-18 00:44:58,412 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-05-18 00:44:58,412 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Repository: ome/omero-signup 2024-05-18 00:44:58,412 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,412 [ scc.merge] INFO 2024-05-18 00:44:58,412 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,412 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Merged PRs: 2024-05-18 00:44:58,413 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: ome/omero-upload 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-05-18 00:44:58,413 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,413 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,413 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-05-18 00:44:58,413 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,413 [ scc.merge] INFO 2024-05-18 00:44:58,413 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,413 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-05-18 00:44:58,414 [ scc.merge] INFO 2024-05-18 00:44:58,414 [ scc.merge] INFO Repository: ome/scripts 2024-05-18 00:44:58,414 [ scc.merge] INFO Excluded PRs: 2024-05-18 00:44:58,414 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-05-18 00:44:58,414 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-05-18 00:44:58,414 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-05-18 00:44:58,414 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-05-18 00:44:58,414 [ scc.merge] INFO Already up to date. 2024-05-18 00:44:58,414 [ scc.merge] INFO 2024-05-18 00:44:58,414 [ scc.merge] INFO Conflicting PRs (not included): 2024-05-18 00:44:58,414 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-05-18 00:44:58,414 [ scc.merge] INFO 2024-05-18 00:44:58,414 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-05-18 00:44:58,414 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,421 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-05-18 00:44:58,421 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,428 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-05-18 00:44:58,428 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,435 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-05-18 00:44:58,435 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-05-18 00:44:58,443 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,451 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-05-18 00:44:58,451 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-05-18 00:44:58,459 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-05-18 00:44:58,466 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,474 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-05-18 00:44:58,474 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,481 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-05-18 00:44:58,481 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,488 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-05-18 00:44:58,488 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-05-18 00:44:58,495 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,502 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-05-18 00:44:58,502 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-05-18 00:44:58,509 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,515 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-05-18 00:44:58,515 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-05-18 00:44:58,523 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-05-18 00:44:58,530 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-05-18 00:44:58,537 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-05-18 00:44:58,544 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-05-18 00:44:58,551 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,557 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-05-18 00:44:58,558 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,564 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-05-18 00:44:58,564 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-05-18 00:44:58,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-05-18 00:44:58,571 [ scc.git] DEBUG Calling 'git remote' 2024-05-18 00:44:58,577 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 599164f] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 3d9e3b87 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 54c3753 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from a0148a6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD 20c03ee] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-05-18 00:45:46,778 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-05-18 00:45:55,784 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-05-18 00:45:58,150 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-18 00:46:02,752 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-05-18 00:46:50,539 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS