Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 68 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.11.0-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (37 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.11.0-py3-none-any.whl (28 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.2.25-py3-none-any.whl (153 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.4 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.11.0 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-03-02 15:58:42,669 [ scc.config] DEBUG Found github.token 2026-03-02 15:58:42,671 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-02 15:58:42,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:43,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:43,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-02 15:58:43,724 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 16:03 2026-03-02 15:58:43,724 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:58:43,727 [ scc.git] DEBUG Check current status 2026-03-02 15:58:43,727 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:58:43,729 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-02 15:58:43,729 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:58:43,776 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-02 15:58:43,779 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-02 15:58:43,782 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-02 15:58:43,785 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-02 15:58:43,789 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-02 15:58:43,791 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-02 15:58:43,794 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-02 15:58:43,797 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-02 15:58:43,800 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-02 15:58:43,803 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-02 15:58:43,805 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-02 15:58:43,808 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-02 15:58:43,812 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-02 15:58:43,815 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-02 15:58:43,818 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-02 15:58:43,821 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-02 15:58:43,823 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-02 15:58:43,826 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-02 15:58:43,828 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-02 15:58:43,831 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-02 15:58:43,834 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-02 15:58:43,837 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-02 15:58:43,840 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:58:44,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-02 15:58:44,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:58:45,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:58:45,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:58:46,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:58:46,047 [ scc.git] DEBUG Resetting... 2026-03-02 15:58:46,047 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-02 15:58:46,055 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-02 15:58:46,055 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-02 15:58:46,155 [ scc.git] DEBUG Check current status 2026-03-02 15:58:46,155 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:58:46,157 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-02 15:58:46,157 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:58:46,202 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-02 15:58:46,204 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-02 15:58:46,207 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-02 15:58:46,210 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-02 15:58:46,214 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-02 15:58:46,217 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-02 15:58:46,219 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-02 15:58:46,222 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-02 15:58:46,225 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-02 15:58:46,228 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-02 15:58:46,231 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-02 15:58:46,233 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-02 15:58:46,237 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-02 15:58:46,239 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-02 15:58:46,243 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-02 15:58:46,245 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-02 15:58:46,248 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-02 15:58:46,250 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-02 15:58:46,253 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-02 15:58:46,256 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-02 15:58:46,258 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-02 15:58:46,262 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-02 15:58:46,263 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-02 15:58:46,263 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-02 15:58:46,263 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-02 15:58:46,263 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-02 15:58:46,263 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-02 15:58:46,263 [ scc.repo] DEBUG ## PRs found: 2026-03-02 15:58:46,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-02 15:58:47,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-02 15:58:47,226 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 15:58:47,226 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-02 15:58:47,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-02 15:58:47,764 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 15:58:47,765 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-02 15:58:48,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-02 15:58:48,349 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 15:58:48,349 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-02 15:58:48,349 [ scc.repo] DEBUG ## Branches found: 2026-03-02 15:58:48,349 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 15:58:48,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:48,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 15:58:48,354 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 15:58:48,354 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 15:58:48,357 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 15:58:48,360 [ scc.git] DEBUG Already up to date. 2026-03-02 15:58:48,360 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-02 15:58:48,770 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 15:58:48,771 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-02 15:58:48,775 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-02 15:58:49,123 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 15:58:49,123 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-02 15:58:49,127 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-02 15:58:49,496 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 15:58:49,496 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-02 15:58:49,501 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 15:58:49,501 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 15:58:49,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:49,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-02 15:58:49,506 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:49,508 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-02 15:58:49,522 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 15:58:49,525 [ scc.git] DEBUG scripts | 2 +- 2026-03-02 15:58:49,525 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 15:58:49,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:49,683 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-02 15:58:49,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:49,688 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-02 15:58:49,702 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 15:58:49,704 [ scc.git] DEBUG omero-figure | 2 +- 2026-03-02 15:58:49,704 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 15:58:50,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:50,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-02 15:58:50,086 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:50,088 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-02 15:58:50,102 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 15:58:50,105 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-03-02 15:58:50,105 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 15:58:50,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:50,502 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 15:58:50,563 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-02 15:58:50,586 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-02 15:58:50,600 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-02 15:58:50,600 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 15:58:50,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 15:58:50,602 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 15:58:50,686 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa7bcfee790> has no local changes 2026-03-02 15:58:50,686 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 15:58:50,756 [ scc.git] DEBUG [detached HEAD 977fd70] merge master -Dorg -Snone 2026-03-02 15:58:50,756 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-02 15:58:50,756 [ scc.merge] INFO Already up to date. 2026-03-02 15:58:50,756 [ scc.merge] INFO 2026-03-02 15:58:50,756 [ scc.merge] INFO Merged PRs: 2026-03-02 15:58:50,756 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-02 15:58:50,756 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-02 15:58:50,756 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-02 15:58:50,756 [ scc.merge] INFO 2026-03-02 15:58:50,756 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-02 15:58:50,756 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out 'd004baf9a7e738c94db52fdfb965be765eaa4b31' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-03-02 15:58:58,667 [ scc.config] DEBUG Found github.token 2026-03-02 15:58:58,668 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-02 15:58:58,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:59,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 15:58:59,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-02 15:58:59,711 [ scc.gh] DEBUG 4985 remaining from 5000 (Reset at 16:03 2026-03-02 15:58:59,712 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:58:59,714 [ scc.git] DEBUG Check current status 2026-03-02 15:58:59,714 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:58:59,716 [ scc.git] DEBUG 977fd70 merge master -Dorg -Snone 2026-03-02 15:58:59,717 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:58:59,763 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-02 15:58:59,766 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-02 15:58:59,769 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-03-02 15:58:59,772 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-03-02 15:58:59,783 [ scc.git] DEBUG +d004baf9a7e738c94db52fdfb965be765eaa4b31 omero-figure (v7.3.1-79-gd004baf9) 2026-03-02 15:58:59,786 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-02 15:58:59,789 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-02 15:58:59,792 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-03-02 15:58:59,795 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-02 15:58:59,798 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-03-02 15:58:59,801 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-02 15:58:59,803 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-02 15:58:59,806 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-03-02 15:58:59,809 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-02 15:58:59,812 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-03-02 15:58:59,814 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-02 15:58:59,817 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-03-02 15:58:59,820 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-03-02 15:58:59,822 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-02 15:58:59,825 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-02 15:58:59,828 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-02 15:58:59,831 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-03-02 15:58:59,834 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:58:59,834 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-03-02 15:58:59,835 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-03-02 15:59:00,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-02 15:59:00,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:01,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:01,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:02,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:02,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:02,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-02 15:59:02,202 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:02,204 [ scc.git] DEBUG Check current status 2026-03-02 15:59:02,204 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:02,206 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-03-02 15:59:02,206 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:02,245 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:02,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-03-02 15:59:03,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:03,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:04,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:04,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:04,457 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:04,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:04,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-02 15:59:04,495 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:04,497 [ scc.git] DEBUG Check current status 2026-03-02 15:59:04,497 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:04,499 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-03-02 15:59:04,500 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:04,538 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:05,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-03-02 15:59:05,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:05,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:06,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:06,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:06,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:06,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:06,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-02 15:59:06,872 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:06,874 [ scc.git] DEBUG Check current status 2026-03-02 15:59:06,874 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:06,876 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-03-02 15:59:06,877 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:06,914 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:07,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-03-02 15:59:07,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:08,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:08,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:09,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:09,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:09,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:09,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-02 15:59:09,203 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:09,205 [ scc.git] DEBUG Check current status 2026-03-02 15:59:09,205 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:09,207 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-02 15:59:09,207 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:09,245 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:09,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-03-02 15:59:10,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:10,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:11,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:11,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:11,490 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:11,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:11,528 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-02 15:59:11,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:11,530 [ scc.git] DEBUG Check current status 2026-03-02 15:59:11,530 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:11,533 [ scc.git] DEBUG d004baf9 Merge pull request #665 from Tom-TBT/z-end 2026-03-02 15:59:11,533 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:11,570 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:12,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-03-02 15:59:12,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:13,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:13,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:13,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:13,972 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:14,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:14,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-02 15:59:14,010 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:14,013 [ scc.git] DEBUG Check current status 2026-03-02 15:59:14,013 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:14,015 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-03-02 15:59:14,015 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:14,053 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:14,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-03-02 15:59:15,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:15,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:16,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:16,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:16,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:16,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:16,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-02 15:59:16,570 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:16,572 [ scc.git] DEBUG Check current status 2026-03-02 15:59:16,573 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:16,575 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-03-02 15:59:16,575 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:16,613 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:17,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-03-02 15:59:17,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:18,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:18,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:18,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:18,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:18,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:18,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-02 15:59:18,991 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:18,993 [ scc.git] DEBUG Check current status 2026-03-02 15:59:18,993 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:18,995 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-03-02 15:59:18,995 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:19,034 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:19,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-03-02 15:59:19,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:20,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:20,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:21,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:21,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:21,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:21,372 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-02 15:59:21,372 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:21,374 [ scc.git] DEBUG Check current status 2026-03-02 15:59:21,374 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:21,376 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-03-02 15:59:21,376 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:21,416 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:22,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-03-02 15:59:22,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:23,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:23,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:23,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:23,940 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:23,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:23,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-02 15:59:23,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:23,982 [ scc.git] DEBUG Check current status 2026-03-02 15:59:23,982 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:23,984 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-02 15:59:23,984 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:24,024 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:24,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-03-02 15:59:25,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:25,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:25,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:26,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:26,369 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:26,409 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:26,410 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-02 15:59:26,410 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:26,412 [ scc.git] DEBUG Check current status 2026-03-02 15:59:26,412 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:26,414 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-03-02 15:59:26,414 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:26,453 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:26,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-03-02 15:59:27,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:27,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:28,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:28,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:28,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:28,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:28,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-02 15:59:28,761 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:28,763 [ scc.git] DEBUG Check current status 2026-03-02 15:59:28,763 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:28,766 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-03-02 15:59:28,766 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:28,804 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:29,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-03-02 15:59:29,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:30,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:30,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:31,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:31,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:31,077 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:31,078 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-02 15:59:31,078 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:31,080 [ scc.git] DEBUG Check current status 2026-03-02 15:59:31,080 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:31,082 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-02 15:59:31,083 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:31,122 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:31,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-03-02 15:59:32,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:32,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:32,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:33,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:33,376 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:33,414 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:33,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-02 15:59:33,415 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:33,417 [ scc.git] DEBUG Check current status 2026-03-02 15:59:33,417 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:33,419 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-03-02 15:59:33,419 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:33,459 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:33,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-03-02 15:59:34,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:34,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:35,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:35,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:35,716 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:35,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:35,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-02 15:59:35,756 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:35,759 [ scc.git] DEBUG Check current status 2026-03-02 15:59:35,759 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:35,761 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-03-02 15:59:35,761 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:35,801 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:36,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-02 15:59:36,162 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-02 15:59:36,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-03-02 15:59:36,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:37,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:37,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:38,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:38,242 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:38,280 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:38,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-02 15:59:38,281 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:38,283 [ scc.git] DEBUG Check current status 2026-03-02 15:59:38,283 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:38,285 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-03-02 15:59:38,285 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:38,324 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:38,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-03-02 15:59:39,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:39,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:40,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:40,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:40,676 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:40,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:40,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-02 15:59:40,715 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:40,717 [ scc.git] DEBUG Check current status 2026-03-02 15:59:40,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:40,720 [ scc.git] DEBUG 160d894 Fix display of code 2026-03-02 15:59:40,720 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:40,757 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:41,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-03-02 15:59:41,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:42,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:42,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:42,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:42,990 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:43,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:43,028 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-02 15:59:43,029 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:43,031 [ scc.git] DEBUG Check current status 2026-03-02 15:59:43,031 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:43,033 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-02 15:59:43,033 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:43,072 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:43,072 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-03-02 15:59:43,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-03-02 15:59:44,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:44,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:44,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:45,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:45,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:45,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:45,483 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-02 15:59:45,483 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:45,485 [ scc.git] DEBUG Check current status 2026-03-02 15:59:45,485 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:45,488 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-03-02 15:59:45,488 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:45,527 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:45,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-02 15:59:45,867 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-02 15:59:46,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-03-02 15:59:46,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:47,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:47,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:48,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:48,062 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:48,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:48,100 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-02 15:59:48,100 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:48,102 [ scc.git] DEBUG Check current status 2026-03-02 15:59:48,102 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:48,105 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-03-02 15:59:48,105 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:48,143 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:48,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-02 15:59:48,513 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-02 15:59:48,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-03-02 15:59:49,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:49,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:50,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:50,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:50,745 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:50,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:50,783 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-02 15:59:50,783 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:50,785 [ scc.git] DEBUG Check current status 2026-03-02 15:59:50,785 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:50,787 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-03-02 15:59:50,787 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:50,826 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:51,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-03-02 15:59:51,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:52,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:52,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:53,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:53,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:53,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:53,218 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-02 15:59:53,218 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-02 15:59:53,220 [ scc.git] DEBUG Check current status 2026-03-02 15:59:53,220 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:53,223 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-03-02 15:59:53,223 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:53,261 [ scc.config] DEBUG Found remote.origin.url 2026-03-02 15:59:53,261 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-03-02 15:59:53,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-02 15:59:53,616 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-02 15:59:53,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-03-02 15:59:54,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-02 15:59:54,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-02 15:59:55,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-02 15:59:55,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-02 15:59:55,765 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 15:59:55,804 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 15:59:55,805 [ scc.git] DEBUG Resetting... 2026-03-02 15:59:55,805 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-02 15:59:55,812 [ scc.git] DEBUG HEAD is now at 977fd70 merge master -Dorg -Snone 2026-03-02 15:59:55,813 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-02 15:59:55,864 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-03-02 15:59:55,881 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-03-02 15:59:55,914 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-02 15:59:55,932 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-02 15:59:55,946 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-03-02 15:59:55,962 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-03-02 15:59:55,976 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-03-02 15:59:55,990 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-03-02 15:59:56,000 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-03-02 15:59:56,025 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-02 15:59:56,028 [ scc.git] DEBUG Check current status 2026-03-02 15:59:56,028 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-02 15:59:56,030 [ scc.git] DEBUG 977fd70 merge master -Dorg -Snone 2026-03-02 15:59:56,030 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-02 15:59:56,073 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-02 15:59:56,076 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-02 15:59:56,078 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-02 15:59:56,081 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-02 15:59:56,085 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-03-02 15:59:56,088 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-02 15:59:56,091 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-02 15:59:56,094 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-03-02 15:59:56,097 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-02 15:59:56,100 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-02 15:59:56,103 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-02 15:59:56,106 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-02 15:59:56,109 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-02 15:59:56,112 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-02 15:59:56,115 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-02 15:59:56,118 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-02 15:59:56,121 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-02 15:59:56,123 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-02 15:59:56,126 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-02 15:59:56,128 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-02 15:59:56,131 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-02 15:59:56,135 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-03-02 15:59:56,135 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-02 15:59:56,135 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-02 15:59:56,136 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-02 15:59:56,136 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-02 15:59:56,136 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-02 15:59:56,136 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-03-02 15:59:56,136 [ scc.repo] DEBUG ## PRs found: 2026-03-02 15:59:56,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-02 15:59:56,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-02 15:59:56,988 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 15:59:57,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-02 15:59:58,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 15:59:58,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-02 15:59:59,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-03-02 15:59:59,147 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-02 15:59:59,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-02 15:59:59,733 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:00:00,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-02 16:00:00,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:01,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-02 16:00:02,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:00:02,354 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-02 16:00:02,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-02 16:00:02,907 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:00:03,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-02 16:00:04,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:04,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-02 16:00:05,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:00:05,176 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-02 16:00:05,176 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:00:05,176 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:05,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:05,179 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:00:05,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:00:05,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:00:05,184 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:00:05,187 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:05,187 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-02 16:00:05,535 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 16:00:05,535 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-02 16:00:05,539 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-02 16:00:05,813 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 16:00:05,813 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-02 16:00:05,818 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-02 16:00:06,182 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-02 16:00:06,182 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-02 16:00:06,186 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:00:06,186 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:06,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:06,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-02 16:00:06,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:06,194 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-02 16:00:06,196 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:06,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:06,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-02 16:00:06,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:06,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-02 16:00:06,385 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:06,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:06,783 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-02 16:00:06,785 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:06,787 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-02 16:00:06,790 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:07,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:07,197 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:00:07,246 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:07,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:07,248 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:00:07,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-03-02 16:00:07,641 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:00:07,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-02 16:00:07,641 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:07,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:07,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:00:07,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:00:07,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:00:07,649 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:00:07,651 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:07,651 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:00:07,651 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:07,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:07,653 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:00:07,692 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:07,692 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:07,695 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:00:07,733 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:00:07,737 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd104876b50> has no local changes 2026-03-02 16:00:07,737 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:00:07,743 [ scc.git] DEBUG [detached HEAD 438e69b] merge master -Dorg -Ssuccess-only 2026-03-02 16:00:07,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:00:07,743 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:00:08,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-03-02 16:00:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-03-02 16:00:09,017 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:00:09,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-02 16:00:10,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:10,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:00:11,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-02 16:00:11,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:00:11,942 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:00:12,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-03-02 16:00:13,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-03-02 16:00:13,079 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:00:13,079 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-02 16:00:13,079 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:13,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:13,081 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:00:13,084 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:00:13,084 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:00:13,086 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:00:13,089 [ scc.git] DEBUG Already up to date. 2026-03-02 16:00:13,089 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-03-02 16:00:13,388 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-03-02 16:00:13,388 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-03-02 16:00:13,392 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:00:13,392 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:13,392 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:13,395 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-02 16:00:13,397 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:13,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-02 16:00:13,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:00:13,408 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:00:13,408 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:00:13,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:13,574 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:00:13,612 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:13,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:13,614 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:00:13,649 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:00:13,652 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1048b6d50> has no local changes 2026-03-02 16:00:13,652 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:00:13,658 [ scc.git] DEBUG [detached HEAD b872dc1] merge master -Dorg -Ssuccess-only 2026-03-02 16:00:13,658 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:00:13,658 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:00:14,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-03-02 16:00:14,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-03-02 16:00:15,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-03-02 16:00:15,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-02 16:00:16,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:16,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:00:17,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-02 16:00:17,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:00:17,901 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-03-02 16:00:18,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-03-02 16:00:18,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-03-02 16:00:18,963 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:00:18,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-02 16:00:18,963 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:18,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:18,966 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:00:18,968 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:00:18,968 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:00:18,971 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:00:18,978 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-03-02 16:00:19,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-03-02 16:00:20,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-03-02 16:00:21,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-03-02 16:00:22,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-03-02 16:00:22,304 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-03-02 16:00:22,584 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-03-02 16:00:22,584 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-03-02 16:00:22,588 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:00:22,588 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:22,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:22,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-02 16:00:22,594 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:22,596 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-02 16:00:22,604 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-03-02 16:00:22,605 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:00:22,608 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-03-02 16:00:22,608 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-03-02 16:00:22,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:22,789 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:00:22,826 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:22,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:22,828 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:00:22,865 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:00:22,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1072c02d0> has no local changes 2026-03-02 16:00:22,868 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:00:22,874 [ scc.git] DEBUG [detached HEAD e291bf1] merge master -Dorg -Ssuccess-only 2026-03-02 16:00:22,874 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:00:22,874 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:00:23,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-03-02 16:00:23,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-03-02 16:00:24,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-03-02 16:00:24,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-02 16:00:25,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:26,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:00:26,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-02 16:00:26,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:27,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-02 16:00:28,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-03-02 16:00:28,178 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-02 16:00:28,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-03-02 16:00:29,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-03-02 16:00:29,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-03-02 16:00:30,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-03-02 16:00:30,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-02 16:00:31,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:31,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:00:32,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-02 16:00:33,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:33,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-02 16:00:33,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-03-02 16:00:33,980 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-02 16:00:34,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-03-02 16:00:35,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-03-02 16:00:35,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-02 16:00:36,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:36,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:00:37,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-02 16:00:38,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-03-02 16:00:38,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-02 16:00:39,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-03-02 16:00:39,145 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-03-02 16:00:39,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-03-02 16:00:40,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-03-02 16:00:40,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-03-02 16:00:41,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-03-02 16:00:42,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-03-02 16:00:42,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-03-02 16:00:43,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-03-02 16:00:43,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-03-02 16:00:43,782 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:00:43,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-02 16:00:43,782 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:43,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:43,784 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:00:43,787 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:00:43,787 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:00:43,790 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:00:43,803 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-03-02 16:00:44,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-03-02 16:00:45,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-03-02 16:00:46,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-03-02 16:00:47,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-03-02 16:00:48,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-03-02 16:00:48,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-03-02 16:00:49,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-03-02 16:00:50,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-03-02 16:00:51,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-03-02 16:00:52,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-03-02 16:00:52,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-03-02 16:00:54,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-03-02 16:00:54,533 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-03-02 16:00:54,984 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-02 16:00:54,984 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-03-02 16:00:54,988 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-03-02 16:00:55,261 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-02 16:00:55,261 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-03-02 16:00:55,266 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-03-02 16:00:55,522 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-02 16:00:55,522 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-03-02 16:00:55,526 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:00:55,526 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:55,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:55,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-02 16:00:55,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:55,535 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-02 16:00:55,546 [ scc.git] DEBUG Auto-merging README.rst 2026-03-02 16:00:55,546 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-02 16:00:55,547 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:00:55,547 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:00:55,550 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:55,555 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-02 16:00:55,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:55,733 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-02 16:00:55,737 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:55,739 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py - src/omero_zarr/util.py --conflicts 2026-03-02 16:00:55,741 [ scc.config] DEBUG Found github.token 2026-03-02 16:00:55,741 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-03-02 16:00:55,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-02 16:00:55,745 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:55,747 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-02 16:00:55,756 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-02 16:00:55,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-02 16:00:55,756 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-02 16:00:55,756 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-02 16:00:55,756 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:00:55,756 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:00:55,759 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:55,763 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-02 16:00:56,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:56,160 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-02 16:00:56,163 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:56,166 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-02 16:00:56,168 [ scc.config] DEBUG Found github.token 2026-03-02 16:00:56,168 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-03-02 16:00:56,168 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-02 16:00:56,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:56,174 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-02 16:00:56,183 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-02 16:00:56,183 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-03-02 16:00:56,183 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-03-02 16:00:56,183 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-03-02 16:00:56,183 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-03-02 16:00:56,184 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:00:56,184 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:00:56,186 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:56,190 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-02 16:00:56,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:00:56,589 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-02 16:00:56,593 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-02 16:00:56,595 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-03-02 16:00:56,597 [ scc.config] DEBUG Found github.token 2026-03-02 16:00:56,598 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-03-02 16:00:56,598 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:00:56,637 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:00:56,637 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:00:56,639 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:00:56,674 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:00:56,678 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10494b5d0> has no local changes 2026-03-02 16:00:56,678 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:00:56,684 [ scc.git] DEBUG [detached HEAD 43a8a51] merge master -Dorg -Ssuccess-only 2026-03-02 16:00:56,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:00:56,684 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:00:57,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-03-02 16:00:57,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/669 HTTP/1.1" 200 None 2026-03-02 16:00:58,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667 HTTP/1.1" 200 None 2026-03-02 16:00:58,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/667/comments HTTP/1.1" 200 None 2026-03-02 16:00:59,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7 HTTP/1.1" 200 None 2026-03-02 16:01:00,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:00,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:01:01,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7 HTTP/1.1" 200 None 2026-03-02 16:01:01,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:01,649 [ scc.repo] DEBUG - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-02 16:01:02,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-03-02 16:01:02,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666/comments HTTP/1.1" 200 None 2026-03-02 16:01:03,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-02 16:01:03,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:04,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/870a04c282c68091e2e59c8bc04247f7419d05e4 HTTP/1.1" 200 None 2026-03-02 16:01:04,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/870a04c282c68091e2e59c8bc04247f7419d05e4?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:04,893 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-03-02 16:01:05,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663 HTTP/1.1" 200 None 2026-03-02 16:01:06,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/663/comments HTTP/1.1" 200 None 2026-03-02 16:01:06,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662 HTTP/1.1" 200 None 2026-03-02 16:01:07,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/662/comments HTTP/1.1" 200 None 2026-03-02 16:01:07,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-02 16:01:08,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:08,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:01:09,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/cfaed4dabe5ddc7f27de211c1a2630942a55a775 HTTP/1.1" 200 None 2026-03-02 16:01:09,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/cfaed4dabe5ddc7f27de211c1a2630942a55a775?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:09,715 [ scc.repo] DEBUG - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-02 16:01:10,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-03-02 16:01:10,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-03-02 16:01:10,760 [ scc.repo] DEBUG # ... Include label: include 2026-03-02 16:01:11,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-02 16:01:11,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:12,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:01:13,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-02 16:01:13,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:13,683 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-02 16:01:14,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-03-02 16:01:14,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-03-02 16:01:14,701 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:01:14,701 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-02 16:01:14,701 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:14,701 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:14,704 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:01:14,706 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:01:14,706 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:01:14,710 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:01:14,751 [ scc.git] DEBUG Updating 9cc36cde..d004baf9 2026-03-02 16:01:15,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-03-02 16:01:16,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-03-02 16:01:17,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-03-02 16:01:18,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-03-02 16:01:19,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-03-02 16:01:20,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-03-02 16:01:21,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-03-02 16:01:21,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-03-02 16:01:22,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-03-02 16:01:23,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-03-02 16:01:24,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-03-02 16:01:25,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-03-02 16:01:26,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-03-02 16:01:26,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-03-02 16:01:27,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-03-02 16:01:28,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-03-02 16:01:29,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-03-02 16:01:30,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-03-02 16:01:30,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-03-02 16:01:31,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-03-02 16:01:32,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-03-02 16:01:33,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-03-02 16:01:34,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-03-02 16:01:34,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-03-02 16:01:35,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-03-02 16:01:36,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-03-02 16:01:37,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-03-02 16:01:37,292 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-03-02 16:01:37,602 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-02 16:01:37,602 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-03-02 16:01:37,606 [ scc.git] DEBUG Calling 'git fetch origin pull/662/head' 2026-03-02 16:01:37,981 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-02 16:01:37,982 [ scc.git] DEBUG * branch refs/pull/662/head -> FETCH_HEAD 2026-03-02 16:01:37,986 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-03-02 16:01:38,246 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-02 16:01:38,246 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-03-02 16:01:38,250 [ scc.git] DEBUG Calling 'git fetch origin pull/667/head' 2026-03-02 16:01:38,944 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-02 16:01:38,945 [ scc.git] DEBUG * branch refs/pull/667/head -> FETCH_HEAD 2026-03-02 16:01:38,947 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:01:38,947 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:38,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:38,950 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-02 16:01:38,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:38,960 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-02 16:01:38,987 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-02 16:01:38,987 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-02 16:01:38,987 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-02 16:01:38,987 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:01:38,993 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-03-02 16:01:38,993 [ scc.git] DEBUG src/index.html | 11 ++ 2026-03-02 16:01:38,993 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-03-02 16:01:38,993 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-03-02 16:01:39,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:39,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-02 16:01:39,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:39,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) cfaed4dabe5ddc7f27de211c1a2630942a55a775' 2026-03-02 16:01:39,193 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-02 16:01:39,194 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:01:39,199 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 435 +++++++++++++++------ 2026-03-02 16:01:39,199 [ scc.git] DEBUG 1 file changed, 319 insertions(+), 116 deletions(-) 2026-03-02 16:01:39,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:39,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-02 16:01:39,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:39,578 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging omero_figure/views.py 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/models/figure_model.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/figure_model.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/models/panel_model.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/views/modal_views.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/views/panel_view.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Auto-merging src/js/views/util.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/js/views/util.js 2026-03-02 16:01:39,606 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:01:39,607 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:01:39,613 [ scc.git] DEBUG Calling 'git reset --hard bfb439189c39f9a8364b3771d85a391bbfbb5f68' 2026-03-02 16:01:39,624 [ scc.git] DEBUG HEAD is now at bfb43918 merge master -Dorg -Ssuccess-only: PR 662 (Export script handles OME-zarr images) 2026-03-02 16:01:40,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:40,009 [ scc.git] DEBUG Calling 'git merge-base d004baf9a7e738c94db52fdfb965be765eaa4b31 870a04c282c68091e2e59c8bc04247f7419d05e4' 2026-03-02 16:01:40,014 [ scc.git] DEBUG Calling 'git diff --name-only b79d638b95385463319f73afc484cf4a1ee3ba13..d004baf9a7e738c94db52fdfb965be765eaa4b31' 2026-03-02 16:01:40,018 [ scc.git] INFO - PR 666 will-moore 'Standalone app' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - src/js/models/panel_model.js - src/js/views/util.js - src/js/models/figure_model.js --conflicts 2026-03-02 16:01:40,020 [ scc.config] DEBUG Found github.token 2026-03-02 16:01:40,020 [ scc.git] DEBUG Not adding comment to issue #666, already --conflicts. 2026-03-02 16:01:40,020 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7' 2026-03-02 16:01:40,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:40,027 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 667 (Label suggestion interface) 24ff8d83d9c9b815a58a458d0aca3e03cfbf6bd7' 2026-03-02 16:01:40,044 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:01:40,048 [ scc.git] DEBUG src/css/figure.css | 15 + 2026-03-02 16:01:40,048 [ scc.git] DEBUG src/js/views/label_suggestions.js | 753 ++++++++++++++++++++++++++ 2026-03-02 16:01:40,048 [ scc.git] DEBUG src/js/views/right_panel_view.js | 55 ++ 2026-03-02 16:01:40,048 [ scc.git] DEBUG src/templates/labels_form_inner.template.html | 64 +-- 2026-03-02 16:01:40,048 [ scc.git] DEBUG 4 files changed, 832 insertions(+), 55 deletions(-) 2026-03-02 16:01:40,048 [ scc.git] DEBUG create mode 100644 src/js/views/label_suggestions.js 2026-03-02 16:01:40,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:40,424 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:01:40,465 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:40,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:40,467 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:01:40,505 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:01:40,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd104901150> has no local changes 2026-03-02 16:01:40,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 663 will-moore 'Zarr' (exclude comment) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..d004baf9 Previously merged: - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 666 will-moore 'Standalone app' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:01:40,518 [ scc.git] DEBUG [detached HEAD 33129473] merge master -Dorg -Ssuccess-only 2026-03-02 16:01:40,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:01:40,518 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:01:41,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-03-02 16:01:41,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-03-02 16:01:41,583 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:01:42,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-02 16:01:42,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:43,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:01:44,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-02 16:01:44,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:44,486 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:01:44,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-03-02 16:01:45,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-03-02 16:01:46,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-02 16:01:46,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:47,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-02 16:01:47,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:47,777 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-03-02 16:01:47,777 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:01:47,778 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-02 16:01:47,778 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:47,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:47,780 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:01:47,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:01:47,783 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:01:47,785 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:01:47,788 [ scc.git] DEBUG Already up to date. 2026-03-02 16:01:47,788 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-03-02 16:01:48,076 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-02 16:01:48,076 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-03-02 16:01:48,080 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-03-02 16:01:48,340 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-02 16:01:48,340 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-03-02 16:01:48,344 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:01:48,344 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:48,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:48,346 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-02 16:01:48,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:48,351 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-02 16:01:48,358 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-03-02 16:01:48,359 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:01:48,362 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-03-02 16:01:48,362 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-03-02 16:01:48,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:48,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-02 16:01:48,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:48,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-02 16:01:48,560 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:01:48,563 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:01:48,563 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:01:48,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:01:48,973 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:01:49,012 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:01:49,012 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:01:49,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:01:49,052 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:01:49,055 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd104900090> has no local changes 2026-03-02 16:01:49,055 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:01:49,060 [ scc.git] DEBUG [detached HEAD ef7c56b] merge master -Dorg -Ssuccess-only 2026-03-02 16:01:49,061 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:01:49,061 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:01:49,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-03-02 16:01:50,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-03-02 16:01:50,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-03-02 16:01:51,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-03-02 16:01:51,247 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:01:51,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-02 16:01:52,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:52,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:01:53,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-02 16:01:53,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:53,910 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-02 16:01:54,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-03-02 16:01:55,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-03-02 16:01:55,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-03-02 16:01:55,541 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:01:56,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-02 16:01:56,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:01:57,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-02 16:01:57,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:01:57,891 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-02 16:01:58,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-03-02 16:01:58,541 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:01:59,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-02 16:01:59,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:00,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-02 16:02:00,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:00,784 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-02 16:02:01,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-03-02 16:02:01,324 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:02:01,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-02 16:02:02,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:02,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-02 16:02:03,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:03,391 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-02 16:02:03,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-03-02 16:02:04,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-03-02 16:02:04,400 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:02:05,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-02 16:02:05,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:06,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-02 16:02:06,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:06,570 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-02 16:02:07,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-03-02 16:02:07,101 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:02:07,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-02 16:02:08,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:08,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-02 16:02:09,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:09,336 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-02 16:02:09,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-03-02 16:02:09,873 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:02:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-02 16:02:11,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:11,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-02 16:02:12,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:12,025 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-02 16:02:12,025 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:02:12,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-02 16:02:12,026 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:12,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:12,028 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:02:12,031 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:02:12,031 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:02:12,033 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:02:12,036 [ scc.git] DEBUG Already up to date. 2026-03-02 16:02:12,036 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-03-02 16:02:12,456 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:12,456 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-03-02 16:02:12,459 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-03-02 16:02:12,713 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:12,713 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-03-02 16:02:12,718 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-03-02 16:02:12,987 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:12,987 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-03-02 16:02:12,991 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-03-02 16:02:13,371 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:13,371 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-03-02 16:02:13,375 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-03-02 16:02:13,637 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:13,637 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-03-02 16:02:13,641 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-03-02 16:02:13,941 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:13,941 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-03-02 16:02:13,945 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-03-02 16:02:14,361 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-02 16:02:14,361 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-03-02 16:02:14,365 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:02:14,365 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:14,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:14,368 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-02 16:02:14,370 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:14,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-02 16:02:14,381 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:14,385 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-03-02 16:02:14,385 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-03-02 16:02:14,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:14,567 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-02 16:02:14,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:14,572 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-02 16:02:14,587 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:14,587 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:14,592 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-03-02 16:02:14,592 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-03-02 16:02:14,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:14,997 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-02 16:02:14,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:15,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-02 16:02:15,016 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:15,016 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-02 16:02:15,017 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:02:15,017 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:02:15,020 [ scc.git] DEBUG Calling 'git reset --hard ccecf5b61cb64d38f4eceae41e7799010e30af4c' 2026-03-02 16:02:15,024 [ scc.git] DEBUG HEAD is now at ccecf5b merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-03-02 16:02:15,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:15,427 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-02 16:02:15,429 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-02 16:02:15,432 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-03-02 16:02:15,434 [ scc.config] DEBUG Found github.token 2026-03-02 16:02:15,434 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-03-02 16:02:15,434 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-02 16:02:15,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:15,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-02 16:02:15,453 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:15,454 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:15,458 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-03-02 16:02:15,458 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-03-02 16:02:15,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:15,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-02 16:02:15,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:15,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-02 16:02:15,898 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:15,899 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:15,904 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-03-02 16:02:15,904 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-03-02 16:02:16,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:16,322 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-02 16:02:16,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:16,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-02 16:02:16,341 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:16,341 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-02 16:02:16,341 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:02:16,341 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:02:16,344 [ scc.git] DEBUG Calling 'git reset --hard 1a92b2507f053a479e977b6b8a1ce9f7d82bc899' 2026-03-02 16:02:16,348 [ scc.git] DEBUG HEAD is now at 1a92b25 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-02 16:02:16,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:16,797 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-02 16:02:16,799 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-02 16:02:16,802 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-03-02 16:02:16,804 [ scc.config] DEBUG Found github.token 2026-03-02 16:02:16,804 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-03-02 16:02:16,804 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-02 16:02:16,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:16,809 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-02 16:02:16,827 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:02:16,827 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-02 16:02:16,827 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:02:16,827 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:02:16,830 [ scc.git] DEBUG Calling 'git reset --hard 1a92b2507f053a479e977b6b8a1ce9f7d82bc899' 2026-03-02 16:02:16,834 [ scc.git] DEBUG HEAD is now at 1a92b25 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-02 16:02:17,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:17,235 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-02 16:02:17,238 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-02 16:02:17,240 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-03-02 16:02:17,242 [ scc.config] DEBUG Found github.token 2026-03-02 16:02:17,242 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-03-02 16:02:17,243 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:02:17,280 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:17,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:17,282 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:02:17,320 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:02:17,325 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10374a550> has no local changes 2026-03-02 16:02:17,325 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:02:17,330 [ scc.git] DEBUG [detached HEAD 11f3dda] merge master -Dorg -Ssuccess-only 2026-03-02 16:02:17,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:02:17,331 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:02:17,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-03-02 16:02:18,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-03-02 16:02:18,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-02 16:02:19,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:20,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:02:20,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-02 16:02:21,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:21,106 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-03-02 16:02:21,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-03-02 16:02:22,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-02 16:02:22,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:23,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:02:23,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-02 16:02:24,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:24,207 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-02 16:02:24,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-03-02 16:02:25,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-03-02 16:02:25,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-03-02 16:02:26,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-03-02 16:02:27,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-03-02 16:02:27,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-03-02 16:02:28,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-03-02 16:02:28,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-03-02 16:02:29,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-02 16:02:29,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:30,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-02 16:02:30,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:30,633 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-02 16:02:31,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-03-02 16:02:31,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-03-02 16:02:32,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-02 16:02:32,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:33,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-02 16:02:33,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:33,754 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-03-02 16:02:34,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-03-02 16:02:34,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-03-02 16:02:35,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-02 16:02:35,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:36,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-02 16:02:36,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:36,726 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-03-02 16:02:37,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-03-02 16:02:37,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-03-02 16:02:38,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-03-02 16:02:38,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:39,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:02:39,480 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:02:39,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-02 16:02:39,480 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:39,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:39,483 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:02:39,485 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:02:39,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:02:39,488 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:02:39,495 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-03-02 16:02:40,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-03-02 16:02:40,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-03-02 16:02:40,985 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-03-02 16:02:42,130 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-02 16:02:42,130 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-03-02 16:02:42,134 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-03-02 16:02:42,399 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-02 16:02:42,400 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-03-02 16:02:42,404 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-03-02 16:02:42,661 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-02 16:02:42,661 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-03-02 16:02:42,664 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-03-02 16:02:42,926 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-02 16:02:42,926 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-03-02 16:02:42,930 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-03-02 16:02:43,456 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-02 16:02:43,456 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-03-02 16:02:43,459 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:02:43,459 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:43,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:43,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-02 16:02:43,465 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:43,467 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-02 16:02:43,477 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-03-02 16:02:43,477 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-03-02 16:02:43,478 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:43,481 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-03-02 16:02:43,481 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-03-02 16:02:43,481 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-03-02 16:02:43,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:43,676 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-02 16:02:43,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:43,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-02 16:02:43,697 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-02 16:02:43,697 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-03-02 16:02:43,697 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-03-02 16:02:43,698 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-03-02 16:02:43,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:43,702 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-03-02 16:02:43,702 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-03-02 16:02:43,702 [ scc.git] DEBUG src/app/header.html | 5 + 2026-03-02 16:02:43,702 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-03-02 16:02:43,702 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-03-02 16:02:43,702 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-03-02 16:02:43,702 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-03-02 16:02:43,702 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-03-02 16:02:44,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:44,086 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-02 16:02:44,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:44,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-02 16:02:44,102 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-03-02 16:02:44,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:44,106 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-03-02 16:02:44,106 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-03-02 16:02:44,106 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-03-02 16:02:44,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:44,499 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-02 16:02:44,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:44,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-02 16:02:44,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:44,518 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-03-02 16:02:44,518 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-03-02 16:02:44,518 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-03-02 16:02:44,518 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-03-02 16:02:44,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:44,930 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-02 16:02:44,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:44,936 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-02 16:02:44,945 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-02 16:02:44,946 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:44,949 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-03-02 16:02:44,949 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-03-02 16:02:45,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:45,483 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:02:45,521 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:45,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:45,523 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:02:45,558 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:02:45,562 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10374d110> has no local changes 2026-03-02 16:02:45,562 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:02:45,568 [ scc.git] DEBUG [detached HEAD 52e01ed] merge master -Dorg -Ssuccess-only 2026-03-02 16:02:45,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:02:45,569 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:02:46,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-03-02 16:02:46,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-03-02 16:02:47,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-03-02 16:02:47,502 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:02:48,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-02 16:02:48,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:49,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:02:49,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-02 16:02:50,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:50,312 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:02:50,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-03-02 16:02:51,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-02 16:02:51,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:52,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-02 16:02:53,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:53,022 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:02:53,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-03-02 16:02:54,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-03-02 16:02:54,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-02 16:02:55,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:02:55,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-02 16:02:56,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:02:56,133 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-03-02 16:02:56,133 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:02:56,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-02 16:02:56,134 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:56,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:56,136 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:02:56,139 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:02:56,139 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:02:56,141 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:02:56,144 [ scc.git] DEBUG Already up to date. 2026-03-02 16:02:56,144 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-02 16:02:56,427 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-02 16:02:56,428 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-02 16:02:56,432 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-03-02 16:02:56,857 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-02 16:02:56,857 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-03-02 16:02:56,862 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-03-02 16:02:57,134 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-02 16:02:57,134 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-03-02 16:02:57,138 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:02:57,138 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:57,138 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:57,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-02 16:02:57,144 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:57,147 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-02 16:02:57,154 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:57,157 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-03-02 16:02:57,157 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-03-02 16:02:57,157 [ scc.git] DEBUG requirements.txt | 2 +- 2026-03-02 16:02:57,157 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-03-02 16:02:57,157 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-03-02 16:02:57,157 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-03-02 16:02:57,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 502 None 2026-03-02 16:02:57,256 [urllib3.util] DEBUG Incremented Retry for (url='/user'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:02:57,331 [urllib3.conn] DEBUG Retry: /user 2026-03-02 16:02:57,331 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:02:57,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:57,582 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-02 16:02:57,586 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:57,588 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-02 16:02:57,596 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:02:57,599 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:02:57,599 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:02:57,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:57,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-02 16:02:58,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:58,005 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-02 16:02:58,012 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-02 16:02:58,012 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-02 16:02:58,012 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:02:58,012 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:02:58,015 [ scc.git] DEBUG Calling 'git reset --hard feab50e4200bf5123aec6d46f77c0f559211a91e' 2026-03-02 16:02:58,019 [ scc.git] DEBUG HEAD is now at feab50e merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-03-02 16:02:58,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:02:58,430 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-02 16:02:58,433 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-03-02 16:02:58,435 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-03-02 16:02:58,437 [ scc.config] DEBUG Found github.token 2026-03-02 16:02:58,437 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-03-02 16:02:58,437 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:02:58,475 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:02:58,475 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:02:58,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:02:58,513 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:02:58,517 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd103741b50> has no local changes 2026-03-02 16:02:58,517 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:02:58,522 [ scc.git] DEBUG [detached HEAD 04981fb] merge master -Dorg -Ssuccess-only 2026-03-02 16:02:58,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:02:58,523 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:02:59,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-03-02 16:02:59,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-03-02 16:03:00,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-03-02 16:03:00,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-02 16:03:01,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:01,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-02 16:03:02,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:02,217 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-02 16:03:02,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-03-02 16:03:03,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-03-02 16:03:04,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-02 16:03:04,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:05,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-02 16:03:05,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:05,620 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-02 16:03:06,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-03-02 16:03:06,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 502 None 2026-03-02 16:03:06,561 [urllib3.util] DEBUG Incremented Retry for (url='/repos/ome/omero-metadata/issues/55/comments'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:03:06,710 [urllib3.conn] DEBUG Retry: /repos/ome/omero-metadata/issues/55/comments 2026-03-02 16:03:06,710 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:03:06,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 502 None 2026-03-02 16:03:06,851 [urllib3.util] DEBUG Incremented Retry for (url='/repos/ome/omero-metadata/issues/55/comments'): GithubRetry(total=8, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:03:06,925 [urllib3.conn] DEBUG Retry: /repos/ome/omero-metadata/issues/55/comments 2026-03-02 16:03:06,926 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:03:07,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-03-02 16:03:07,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-02 16:03:08,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:08,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-02 16:03:09,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:09,450 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-02 16:03:09,450 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:09,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-02 16:03:09,450 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:09,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:09,453 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:09,456 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:09,456 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:09,458 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:09,465 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-03-02 16:03:10,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-03-02 16:03:10,378 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-03-02 16:03:10,650 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-02 16:03:10,650 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-03-02 16:03:10,653 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-03-02 16:03:10,915 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-02 16:03:10,915 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-03-02 16:03:10,919 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-03-02 16:03:11,173 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-02 16:03:11,173 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-03-02 16:03:11,177 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:11,177 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:11,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:11,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-02 16:03:11,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:11,186 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-02 16:03:11,197 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-03-02 16:03:11,197 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-03-02 16:03:11,197 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-02 16:03:11,198 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-02 16:03:11,198 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:03:11,198 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:03:11,200 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-02 16:03:11,204 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-02 16:03:11,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:11,383 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-02 16:03:11,387 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-02 16:03:11,390 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-03-02 16:03:11,392 [ scc.config] DEBUG Found github.token 2026-03-02 16:03:11,392 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-03-02 16:03:11,392 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-02 16:03:11,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:11,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-02 16:03:11,411 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-02 16:03:11,411 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-02 16:03:11,411 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-03-02 16:03:11,411 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:03:11,412 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:03:11,414 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-02 16:03:11,419 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-02 16:03:11,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:11,825 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-02 16:03:11,829 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-02 16:03:11,831 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-03-02 16:03:11,833 [ scc.config] DEBUG Found github.token 2026-03-02 16:03:11,833 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-03-02 16:03:11,833 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-02 16:03:11,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:11,838 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-02 16:03:11,846 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:11,849 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-03-02 16:03:11,849 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-03-02 16:03:12,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:12,288 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:12,331 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:12,331 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:12,334 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:12,372 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:12,376 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd103741950> has no local changes 2026-03-02 16:03:12,376 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:12,382 [ scc.git] DEBUG [detached HEAD 3f31bb9] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:12,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:12,382 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:12,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-03-02 16:03:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-03-02 16:03:14,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-02 16:03:14,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:15,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:15,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-02 16:03:16,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:16,322 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:03:16,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-03-02 16:03:16,867 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:17,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-02 16:03:18,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:18,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:19,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-02 16:03:19,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:19,767 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-02 16:03:20,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-03-02 16:03:20,346 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:20,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-02 16:03:21,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:22,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:22,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-02 16:03:23,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:23,216 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-02 16:03:23,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-03-02 16:03:24,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-03-02 16:03:24,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-03-02 16:03:25,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-03-02 16:03:25,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-03-02 16:03:26,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-03-02 16:03:26,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-03-02 16:03:26,841 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:26,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-02 16:03:26,841 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:26,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:26,844 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:26,846 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:26,846 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:26,849 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:26,851 [ scc.git] DEBUG Already up to date. 2026-03-02 16:03:26,852 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-03-02 16:03:27,118 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-02 16:03:27,118 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-03-02 16:03:27,122 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-03-02 16:03:27,382 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-02 16:03:27,382 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-03-02 16:03:27,386 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-03-02 16:03:27,832 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-02 16:03:27,832 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-03-02 16:03:27,836 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:27,836 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:27,836 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:27,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-02 16:03:27,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:27,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-02 16:03:27,850 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:27,853 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-03-02 16:03:27,853 [ scc.git] DEBUG package.json | 2 +- 2026-03-02 16:03:27,853 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-03-02 16:03:28,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:28,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-03-02 16:03:28,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:28,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-03-02 16:03:28,037 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-02 16:03:28,037 [ scc.git] DEBUG Auto-merging package.json 2026-03-02 16:03:28,038 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:28,041 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-03-02 16:03:28,041 [ scc.git] DEBUG package.json | 2 +- 2026-03-02 16:03:28,041 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-03-02 16:03:28,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:28,442 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-02 16:03:28,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:28,447 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-02 16:03:28,454 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:28,457 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:03:28,457 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:03:28,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:28,880 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:28,918 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:28,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:28,921 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:28,958 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:28,962 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037418d0> has no local changes 2026-03-02 16:03:28,962 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:28,968 [ scc.git] DEBUG [detached HEAD 08c816a] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:28,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:28,968 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:29,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-03-02 16:03:30,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-03-02 16:03:30,438 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:31,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-02 16:03:31,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:32,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-02 16:03:33,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:33,101 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:03:33,101 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:33,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-02 16:03:33,101 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:33,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:33,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:33,107 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:33,107 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:33,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:33,112 [ scc.git] DEBUG Already up to date. 2026-03-02 16:03:33,112 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-03-02 16:03:33,536 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-03-02 16:03:33,536 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-03-02 16:03:33,541 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:33,541 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:33,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:33,543 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-02 16:03:33,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:33,548 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-02 16:03:33,554 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:33,557 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:03:33,557 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:03:33,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:33,735 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:33,772 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:33,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:33,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:33,810 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:33,813 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037986d0> has no local changes 2026-03-02 16:03:33,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:33,819 [ scc.git] DEBUG [detached HEAD 61c4060] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:33,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:33,819 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:34,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-03-02 16:03:34,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-03-02 16:03:35,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34/comments HTTP/1.1" 200 None 2026-03-02 16:03:35,313 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:35,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-02 16:03:36,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:37,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:37,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-02 16:03:38,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:38,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-02 16:03:39,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-03-02 16:03:39,240 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:03:39,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-03-02 16:03:39,755 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:39,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-02 16:03:39,755 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:39,755 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:39,758 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:39,760 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:39,760 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:39,763 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:39,771 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-03-02 16:03:40,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-03-02 16:03:41,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-03-02 16:03:41,320 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-03-02 16:03:41,616 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-03-02 16:03:41,616 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-03-02 16:03:41,620 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:41,620 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:41,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:41,623 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-03-02 16:03:41,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:41,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-03-02 16:03:41,634 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-02 16:03:41,634 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-02 16:03:41,634 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:03:41,634 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:03:41,637 [ scc.git] DEBUG Calling 'git reset --hard fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-02 16:03:41,640 [ scc.git] DEBUG HEAD is now at fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-02 16:03:41,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:41,797 [ scc.git] DEBUG Calling 'git merge-base fc9ff96901ce7b92e3ba51327ba7ba64fff76959 149bb248277256d589ea0db597c04739e8134301' 2026-03-02 16:03:41,800 [ scc.git] DEBUG Calling 'git diff --name-only bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9..fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-02 16:03:41,802 [ scc.git] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - .github/workflows/publish_pypi.yml --conflicts 2026-03-02 16:03:41,804 [ scc.config] DEBUG Found github.token 2026-03-02 16:03:41,804 [ scc.git] DEBUG Not adding comment to issue #34, already --conflicts. 2026-03-02 16:03:41,804 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:41,841 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:41,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:41,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:41,879 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:41,882 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1048f7010> has no local changes 2026-03-02 16:03:41,882 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:41,887 [ scc.git] DEBUG [detached HEAD 8469296] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:41,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:41,888 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:42,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-03-02 16:03:42,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-03-02 16:03:42,901 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:43,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-02 16:03:44,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:44,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:03:45,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-02 16:03:45,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:45,702 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:03:46,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-03-02 16:03:46,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-03-02 16:03:47,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-02 16:03:47,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:48,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-02 16:03:48,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:48,977 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-02 16:03:48,977 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:48,977 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-02 16:03:48,977 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:48,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:48,980 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:48,982 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:48,982 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:48,985 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:48,987 [ scc.git] DEBUG Already up to date. 2026-03-02 16:03:48,987 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-02 16:03:49,263 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-02 16:03:49,263 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-02 16:03:49,267 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-02 16:03:49,697 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-02 16:03:49,697 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-02 16:03:49,701 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:49,702 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:49,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:49,704 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-02 16:03:49,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:49,709 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-02 16:03:49,717 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG Auto-merging setup.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-03-02 16:03:49,717 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:03:49,717 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:03:49,720 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-02 16:03:49,724 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-03-02 16:03:49,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:49,888 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-02 16:03:49,891 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-02 16:03:49,894 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/urls.py - setup.py - omero_signup/signup_settings.py --conflicts 2026-03-02 16:03:49,896 [ scc.config] DEBUG Found github.token 2026-03-02 16:03:49,896 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-03-02 16:03:49,896 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-02 16:03:49,898 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:49,900 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-02 16:03:49,906 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:49,908 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:03:49,908 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:03:50,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:50,297 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:50,334 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:50,334 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:50,336 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:50,372 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:50,375 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10378ee10> has no local changes 2026-03-02 16:03:50,375 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:50,381 [ scc.git] DEBUG [detached HEAD 24bf956] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:50,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:50,381 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:50,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-03-02 16:03:51,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-03-02 16:03:51,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-03-02 16:03:52,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-03-02 16:03:52,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-02 16:03:53,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:03:53,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-02 16:03:54,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:03:54,459 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-02 16:03:54,459 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:03:54,459 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-02 16:03:54,460 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:54,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:54,462 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:03:54,465 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:03:54,465 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:03:54,468 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:03:54,475 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-03-02 16:03:55,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-03-02 16:03:56,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-03-02 16:03:56,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-03-02 16:03:56,852 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-02 16:03:57,124 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-03-02 16:03:57,124 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-02 16:03:57,129 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:03:57,129 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:57,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:57,131 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-03-02 16:03:57,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:57,136 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-03-02 16:03:57,143 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-03-02 16:03:57,144 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:03:57,147 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-03-02 16:03:57,147 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-03-02 16:03:57,147 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-03-02 16:03:57,147 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-03-02 16:03:57,147 [ scc.git] DEBUG ms/test | 2 ++ 2026-03-02 16:03:57,147 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-03-02 16:03:57,147 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-03-02 16:03:57,147 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-03-02 16:03:57,147 [ scc.git] DEBUG create mode 100755 ms/test 2026-03-02 16:03:57,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:03:57,309 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:03:57,349 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:03:57,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:03:57,351 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:03:57,387 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:03:57,391 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd103739550> has no local changes 2026-03-02 16:03:57,391 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:03:57,396 [ scc.git] DEBUG [detached HEAD 084a3b1] merge master -Dorg -Ssuccess-only 2026-03-02 16:03:57,397 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:03:57,397 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:03:57,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 502 None 2026-03-02 16:03:57,660 [urllib3.util] DEBUG Incremented Retry for (url='/repos/ome/omero-upload/pulls'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:03:57,673 [urllib3.conn] DEBUG Retry: /repos/ome/omero-upload/pulls 2026-03-02 16:03:57,673 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:03:58,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-03-02 16:03:58,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-03-02 16:03:58,561 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:03:59,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-02 16:03:59,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:00,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:04:00,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-02 16:04:01,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:01,399 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:01,399 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:01,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-02 16:04:01,399 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:01,400 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:01,402 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:04:01,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:01,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:04:01,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:04:01,410 [ scc.git] DEBUG Already up to date. 2026-03-02 16:04:01,411 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-02 16:04:01,877 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-03-02 16:04:01,878 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-02 16:04:01,882 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:01,882 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:01,882 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:01,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-02 16:04:01,887 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:01,889 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-02 16:04:01,895 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:04:01,897 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:04:01,897 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:04:02,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:02,064 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:02,101 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:02,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:02,103 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:02,139 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:02,142 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037c1850> has no local changes 2026-03-02 16:04:02,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:02,148 [ scc.git] DEBUG [detached HEAD 4ed26fa] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:02,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:02,148 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:02,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-03-02 16:04:03,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-03-02 16:04:03,342 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:04:04,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-02 16:04:04,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:05,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:04:05,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-02 16:04:06,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:06,336 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:06,336 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:06,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-02 16:04:06,336 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:06,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:06,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:04:06,341 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:06,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:04:06,344 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:04:06,350 [ scc.git] DEBUG Updating deab817..160d894 2026-03-02 16:04:07,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-03-02 16:04:07,278 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-02 16:04:07,562 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-03-02 16:04:07,562 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-02 16:04:07,566 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:07,566 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:07,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:07,569 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-02 16:04:07,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:07,573 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-02 16:04:07,580 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:04:07,582 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:04:07,583 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:04:07,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:07,761 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:07,798 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:07,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:07,800 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:07,836 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:07,839 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037c33d0> has no local changes 2026-03-02 16:04:07,839 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:07,845 [ scc.git] DEBUG [detached HEAD 24823b3] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:07,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:07,845 [ scc.git] INFO Overriding base-branch from master to main 2026-03-02 16:04:07,845 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:08,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-03-02 16:04:08,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-03-02 16:04:09,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-03-02 16:04:09,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-02 16:04:10,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:11,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:04:11,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-02 16:04:12,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:12,131 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-03-02 16:04:12,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-03-02 16:04:13,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-03-02 16:04:13,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-03-02 16:04:14,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-02 16:04:14,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:15,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-02 16:04:15,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:15,849 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-02 16:04:15,849 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:15,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-02 16:04:15,849 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:15,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:15,852 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-03-02 16:04:15,854 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:15,854 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-03-02 16:04:15,857 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-03-02 16:04:15,863 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-03-02 16:04:16,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-03-02 16:04:17,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-03-02 16:04:17,728 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-03-02 16:04:18,024 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-02 16:04:18,024 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-03-02 16:04:18,028 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-03-02 16:04:18,298 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-02 16:04:18,298 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-03-02 16:04:18,302 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:18,302 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:18,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:18,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-02 16:04:18,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:18,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-02 16:04:18,317 [ scc.git] DEBUG Auto-merging README.rst 2026-03-02 16:04:18,317 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-03-02 16:04:18,317 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-03-02 16:04:18,317 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-02 16:04:18,317 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-02 16:04:18,317 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-02 16:04:18,320 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-02 16:04:18,323 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-02 16:04:18,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:18,500 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-02 16:04:18,502 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-02 16:04:18,505 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#76](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-03-02 16:04:18,507 [ scc.config] DEBUG Found github.token 2026-03-02 16:04:18,507 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-03-02 16:04:18,507 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-02 16:04:18,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:18,512 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-02 16:04:18,519 [ scc.git] DEBUG Auto-merging README.rst 2026-03-02 16:04:18,519 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-02 16:04:18,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:04:18,523 [ scc.git] DEBUG README.rst | 3 + 2026-03-02 16:04:18,523 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-03-02 16:04:18,523 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-03-02 16:04:18,523 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-03-02 16:04:18,523 [ scc.git] DEBUG setup.py | 5 +- 2026-03-02 16:04:18,523 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-03-02 16:04:18,523 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-03-02 16:04:18,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:18,925 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:18,963 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:18,963 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:18,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:19,001 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:19,005 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037c5c50> has no local changes 2026-03-02 16:04:19,005 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:19,010 [ scc.git] DEBUG [detached HEAD 75b522b] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:19,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:19,011 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:19,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-03-02 16:04:20,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-03-02 16:04:20,071 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:04:20,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-02 16:04:21,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:21,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:04:22,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-02 16:04:22,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:22,979 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:22,979 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:22,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-02 16:04:22,980 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:22,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:22,982 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:04:22,984 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:22,985 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:04:22,987 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:04:22,990 [ scc.git] DEBUG Already up to date. 2026-03-02 16:04:22,990 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-03-02 16:04:23,279 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-03-02 16:04:23,279 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-03-02 16:04:23,283 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:23,283 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:23,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:23,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-02 16:04:23,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:23,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-02 16:04:23,297 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:04:23,300 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:04:23,300 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:04:23,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:23,461 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:23,499 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:23,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:23,501 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:23,536 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:23,540 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd103754190> has no local changes 2026-03-02 16:04:23,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:23,545 [ scc.git] DEBUG [detached HEAD 1f7f7a5] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:23,545 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:23,545 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:23,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-03-02 16:04:24,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-03-02 16:04:24,512 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-02 16:04:25,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-02 16:04:25,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-02 16:04:26,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-02 16:04:26,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-02 16:04:27,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-03-02 16:04:27,204 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:27,205 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:27,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-02 16:04:27,205 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:27,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:27,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:04:27,210 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:27,210 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:04:27,213 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:04:27,215 [ scc.git] DEBUG Already up to date. 2026-03-02 16:04:27,215 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-03-02 16:04:27,540 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-03-02 16:04:27,541 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-03-02 16:04:27,545 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:27,545 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:27,545 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:27,547 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-02 16:04:27,550 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:27,552 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-02 16:04:27,558 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-02 16:04:27,561 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-02 16:04:27,561 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-02 16:04:27,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:27,711 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:27,750 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:27,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:27,752 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:27,788 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:27,792 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd1037f7c50> has no local changes 2026-03-02 16:04:27,792 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:27,797 [ scc.git] DEBUG [detached HEAD f862167] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:27,798 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:27,798 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:28,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-03-02 16:04:28,182 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:28,182 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-02 16:04:28,182 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:28,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:28,184 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-02 16:04:28,187 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:28,187 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-02 16:04:28,189 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-02 16:04:28,192 [ scc.git] DEBUG Already up to date. 2026-03-02 16:04:28,192 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:28,192 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:28,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:28,194 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:28,231 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:28,231 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:28,233 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:28,269 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:28,272 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd100617d10> has no local changes 2026-03-02 16:04:28,272 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:28,278 [ scc.git] DEBUG [detached HEAD 614ee24] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:28,278 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:28,278 [ scc.git] INFO Overriding base-branch from master to develop 2026-03-02 16:04:28,278 [ scc.repo] DEBUG ## PRs found: 2026-03-02 16:04:28,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-03-02 16:04:28,621 [ scc.repo] DEBUG ## Branches found: 2026-03-02 16:04:28,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-02 16:04:28,621 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:28,621 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:28,623 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-03-02 16:04:28,625 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-02 16:04:28,625 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-03-02 16:04:28,628 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-03-02 16:04:28,640 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-03-02 16:04:29,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-03-02 16:04:30,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-03-02 16:04:31,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-03-02 16:04:32,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-03-02 16:04:32,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-03-02 16:04:33,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-03-02 16:04:34,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-03-02 16:04:34,524 [ scc.git] DEBUG ## Unique users: [] 2026-03-02 16:04:34,524 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:34,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:34,527 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-02 16:04:34,564 [ scc.git] DEBUG Get sha1 of %s 2026-03-02 16:04:34,564 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-02 16:04:34,566 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:34,602 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:34,606 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd10380fbd0> has no local changes 2026-03-02 16:04:34,606 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:34,612 [ scc.git] DEBUG [detached HEAD 8462d40] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:34,612 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:34,612 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-02 16:04:34,683 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-03-02 16:04:34,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:34,951 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-03-02 16:04:34,952 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-03-02 16:04:35,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:35,380 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-03-02 16:04:35,381 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-03-02 16:04:35,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:35,774 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-03-02 16:04:35,776 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-03-02 16:04:36,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:36,197 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-03-02 16:04:36,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:36,595 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-03-02 16:04:36,597 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-03-02 16:04:37,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:37,028 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-03-02 16:04:37,029 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-03-02 16:04:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:37,442 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-03-02 16:04:37,444 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-03-02 16:04:37,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:37,852 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-03-02 16:04:37,854 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-03-02 16:04:38,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:38,266 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-03-02 16:04:38,268 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-03-02 16:04:38,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:38,680 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-03-02 16:04:38,682 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-03-02 16:04:39,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:39,094 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-03-02 16:04:39,096 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-03-02 16:04:39,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:39,499 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-03-02 16:04:39,501 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-03-02 16:04:39,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:39,929 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-03-02 16:04:40,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:40,350 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-03-02 16:04:40,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:40,768 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-03-02 16:04:40,770 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-03-02 16:04:41,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:41,189 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-03-02 16:04:41,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:41,593 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-03-02 16:04:42,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:42,035 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-03-02 16:04:42,037 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-03-02 16:04:42,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:42,443 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-03-02 16:04:42,444 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-03-02 16:04:42,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:42,837 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-03-02 16:04:42,839 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-03-02 16:04:43,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:43,240 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-03-02 16:04:43,242 [ scc.config] DEBUG Found submodule.scripts.url 2026-03-02 16:04:43,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 502 None 2026-03-02 16:04:43,587 [urllib3.util] DEBUG Incremented Retry for (url='/user'): GithubRetry(total=9, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:04:43,664 [urllib3.conn] DEBUG Retry: /user 2026-03-02 16:04:43,665 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:04:43,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 502 None 2026-03-02 16:04:43,811 [urllib3.util] DEBUG Incremented Retry for (url='/user'): GithubRetry(total=8, connect=None, read=None, redirect=None, status=None) 2026-03-02 16:04:43,889 [urllib3.conn] DEBUG Retry: /user 2026-03-02 16:04:43,889 [urllib3.conn] DEBUG Resetting dropped connection: api.github.com 2026-03-02 16:04:44,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-02 16:04:44,077 [ scc.config] DEBUG Found submodule.scripts.branch 2026-03-02 16:04:44,077 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-02 16:04:44,156 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd105401e10> has local changes 2026-03-02 16:04:44,157 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (stage: draft) - PR 663 will-moore 'Zarr' (exclude comment) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..d004baf9 Previously merged: - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 667 Tom-TBT 'Label suggestion interface' Conflicting PRs (not included): - PR 666 will-moore 'Standalone app' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#76 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/76/)' 2026-03-02 16:04:44,168 [ scc.git] DEBUG [detached HEAD 5fb1747] merge master -Dorg -Ssuccess-only 2026-03-02 16:04:44,168 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-03-02 16:04:44,168 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-02 16:04:44,169 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-03-02 16:04:44,169 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-03-02 16:04:44,169 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-03-02 16:04:44,169 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-03-02 16:04:44,169 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-03-02 16:04:44,169 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-03-02 16:04:44,169 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-03-02 16:04:44,169 [ scc.merge] INFO 2026-03-02 16:04:44,169 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-03-02 16:04:44,169 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-03-02 16:04:44,169 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-03-02 16:04:44,169 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-03-02 16:04:44,169 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,170 [ scc.merge] INFO 2026-03-02 16:04:44,170 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-02 16:04:44,170 [ scc.merge] INFO 2026-03-02 16:04:44,170 [ scc.merge] INFO Repository: ome/omero-figure 2026-03-02 16:04:44,170 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' (stage: draft) 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 663 will-moore 'Zarr' (exclude comment) 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-03-02 16:04:44,170 [ scc.merge] INFO Updating 9cc36cde..d004baf9 2026-03-02 16:04:44,170 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-03-02 16:04:44,170 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-03-02 16:04:44,171 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Repository: ome/omero-gallery 2026-03-02 16:04:44,171 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-03-02 16:04:44,171 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-03-02 16:04:44,171 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-03-02 16:04:44,171 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,171 [ scc.merge] INFO 2026-03-02 16:04:44,171 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-03-02 16:04:44,171 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Repository: ome/omero-mapr 2026-03-02 16:04:44,172 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-03-02 16:04:44,172 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Repository: ome/omero-metadata 2026-03-02 16:04:44,172 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-03-02 16:04:44,172 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Repository: ome/omero-parade 2026-03-02 16:04:44,172 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-03-02 16:04:44,172 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-03-02 16:04:44,172 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,172 [ scc.merge] INFO 2026-03-02 16:04:44,172 [ scc.merge] INFO Repository: ome/omero-rois 2026-03-02 16:04:44,172 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,172 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-02 16:04:44,172 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-03-02 16:04:44,173 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Repository: ome/omero-signup 2026-03-02 16:04:44,173 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-03-02 16:04:44,173 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-03-02 16:04:44,173 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-03-02 16:04:44,173 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Repository: ome/omero-upload 2026-03-02 16:04:44,173 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-03-02 16:04:44,173 [ scc.merge] INFO Updating deab817..160d894 2026-03-02 16:04:44,173 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,173 [ scc.merge] INFO 2026-03-02 16:04:44,173 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-03-02 16:04:44,173 [ scc.merge] INFO Excluded PRs: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-03-02 16:04:44,173 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-03-02 16:04:44,173 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-03-02 16:04:44,173 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-03-02 16:04:44,174 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-03-02 16:04:44,174 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Merged PRs: 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-03-02 16:04:44,174 [ scc.merge] INFO Already up to date. 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO Repository: ome/scripts 2026-03-02 16:04:44,174 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-03-02 16:04:44,174 [ scc.merge] INFO Previously merged: 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-03-02 16:04:44,174 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] INFO 2026-03-02 16:04:44,174 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-02 16:04:44,174 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,176 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-02 16:04:44,176 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,179 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-02 16:04:44,179 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,181 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-02 16:04:44,181 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-02 16:04:44,183 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-02 16:04:44,185 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,188 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-02 16:04:44,188 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-02 16:04:44,190 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-02 16:04:44,192 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-02 16:04:44,194 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,196 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-02 16:04:44,196 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,198 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-02 16:04:44,198 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,200 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-02 16:04:44,200 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-02 16:04:44,203 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,204 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,205 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-02 16:04:44,205 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-02 16:04:44,207 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,209 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-02 16:04:44,209 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-02 16:04:44,211 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,213 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-02 16:04:44,213 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-02 16:04:44,215 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,217 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-02 16:04:44,217 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,219 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-02 16:04:44,219 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-02 16:04:44,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-02 16:04:44,222 [ scc.git] DEBUG Calling 'git remote' 2026-03-02 16:04:44,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD c51f6a2] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 99fd547] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-02 16:05:35,372 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-02 16:05:45,041 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-02 16:05:47,603 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-02 16:05:52,880 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-02 16:06:36,468 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS