Started by upstream project "Trigger" build number 108 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 85 [Pipeline] sh > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.0.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.8.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.12.1-py3-none-any.whl.metadata (4.1 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.6-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.8.1-py3-none-any.whl (432 kB) Using cached pyjwt-2.12.1-py3-none-any.whl (29 kB) Using cached cryptography-46.0.5-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.6-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (204 kB) Using cached idna-3.11-py3-none-any.whl (71 kB) Using cached certifi-2026.2.25-py3-none-any.whl (153 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.8.1 PyYAML-6.0.3 certifi-2026.2.25 cffi-2.0.0 charset_normalizer-3.4.6 cryptography-46.0.5 future-1.0.0 idna-3.11 pycparser-3.0 pyjwt-2.12.1 pynacl-1.6.2 requests-2.32.5 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-03-18 00:44:06,799 [ scc.config] DEBUG Found github.token 2026-03-18 00:44:06,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-18 00:44:07,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:07,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:08,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-18 00:44:08,016 [ scc.gh] DEBUG 4106 remaining from 5000 (Reset at 00:03 2026-03-18 00:44:08,016 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:08,019 [ scc.git] DEBUG Check current status 2026-03-18 00:44:08,019 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:08,022 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-18 00:44:08,022 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:08,069 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-18 00:44:08,072 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-18 00:44:08,075 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-18 00:44:08,078 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-18 00:44:08,083 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-18 00:44:08,085 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-18 00:44:08,088 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-18 00:44:08,091 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-18 00:44:08,094 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-18 00:44:08,097 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-18 00:44:08,099 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-18 00:44:08,102 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-18 00:44:08,105 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-18 00:44:08,108 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-18 00:44:08,111 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-18 00:44:08,114 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-18 00:44:08,117 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-18 00:44:08,120 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-18 00:44:08,122 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-18 00:44:08,125 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-18 00:44:08,128 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-18 00:44:08,131 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-18 00:44:08,134 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:08,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-18 00:44:09,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:09,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:10,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:10,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:10,541 [ scc.git] DEBUG Resetting... 2026-03-18 00:44:10,541 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-18 00:44:10,549 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-18 00:44:10,549 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-18 00:44:10,645 [ scc.git] DEBUG Check current status 2026-03-18 00:44:10,645 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:10,648 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-03-18 00:44:10,648 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:10,693 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-18 00:44:10,695 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-18 00:44:10,698 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-18 00:44:10,701 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-18 00:44:10,705 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-03-18 00:44:10,708 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-18 00:44:10,710 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-18 00:44:10,713 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-03-18 00:44:10,716 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-18 00:44:10,719 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-18 00:44:10,721 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-18 00:44:10,724 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-18 00:44:10,727 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-18 00:44:10,729 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-18 00:44:10,732 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-18 00:44:10,735 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-18 00:44:10,737 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-18 00:44:10,740 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-18 00:44:10,742 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-18 00:44:10,745 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-18 00:44:10,747 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-18 00:44:10,751 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-03-18 00:44:10,751 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-18 00:44:10,752 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-18 00:44:10,752 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-18 00:44:10,752 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-18 00:44:10,752 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-18 00:44:10,752 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:44:11,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-18 00:44:11,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-18 00:44:11,565 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:44:11,565 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-18 00:44:12,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-18 00:44:12,107 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:44:12,107 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-18 00:44:12,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-18 00:44:12,670 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:44:12,670 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-18 00:44:12,670 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:44:12,670 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:44:12,670 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:12,673 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:44:12,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:44:12,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:44:12,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:44:12,680 [ scc.git] DEBUG Already up to date. 2026-03-18 00:44:12,680 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-18 00:44:12,973 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:44:12,973 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-18 00:44:12,977 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-18 00:44:13,358 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:44:13,358 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-18 00:44:13,362 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-18 00:44:13,625 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:44:13,625 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-18 00:44:13,629 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:44:13,629 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:44:13,629 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:13,631 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-18 00:44:13,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:13,636 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-18 00:44:13,650 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:44:13,652 [ scc.git] DEBUG scripts | 2 +- 2026-03-18 00:44:13,652 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:44:13,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:13,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-18 00:44:13,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:13,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-18 00:44:13,912 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:44:13,914 [ scc.git] DEBUG omero-figure | 2 +- 2026-03-18 00:44:13,914 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:44:14,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:14,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-18 00:44:14,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:14,406 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-18 00:44:14,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:44:14,424 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-03-18 00:44:14,424 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:44:14,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:14,837 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:44:14,901 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-18 00:44:14,922 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-18 00:44:14,935 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-18 00:44:14,936 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:44:14,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:44:14,938 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:44:15,432 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f296f0c0d90> has no local changes 2026-03-18 00:44:15,433 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:44:15,530 [ scc.git] DEBUG [detached HEAD 1a81816] merge master -Dorg -Snone 2026-03-18 00:44:15,530 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-18 00:44:15,530 [ scc.merge] INFO Already up to date. 2026-03-18 00:44:15,530 [ scc.merge] INFO 2026-03-18 00:44:15,530 [ scc.merge] INFO Merged PRs: 2026-03-18 00:44:15,530 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-18 00:44:15,530 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-18 00:44:15,530 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-18 00:44:15,530 [ scc.merge] INFO 2026-03-18 00:44:15,530 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-18 00:44:15,530 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out '02728d0a7bef3f949bcd5d926360881390f62bf1' Submodule path 'omero-iviewer': checked out '5e2de43ad401fb00690a79644056e0ac15fabfd5' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-03-18 00:44:24,418 [ scc.config] DEBUG Found github.token 2026-03-18 00:44:24,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-03-18 00:44:24,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:25,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:44:25,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-03-18 00:44:25,504 [ scc.gh] DEBUG 4097 remaining from 5000 (Reset at 00:03 2026-03-18 00:44:25,505 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:25,507 [ scc.git] DEBUG Check current status 2026-03-18 00:44:25,507 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:25,510 [ scc.git] DEBUG 1a81816 merge master -Dorg -Snone 2026-03-18 00:44:25,510 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:25,555 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-18 00:44:25,558 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-18 00:44:25,560 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-03-18 00:44:25,563 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-03-18 00:44:25,574 [ scc.git] DEBUG +02728d0a7bef3f949bcd5d926360881390f62bf1 omero-figure (v7.4.1-57-g02728d0a) 2026-03-18 00:44:25,577 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-18 00:44:25,580 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-18 00:44:25,583 [ scc.git] DEBUG +5e2de43ad401fb00690a79644056e0ac15fabfd5 omero-iviewer (v0.16.0-20-g5e2de43) 2026-03-18 00:44:25,586 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-18 00:44:25,589 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-03-18 00:44:25,592 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-18 00:44:25,594 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-18 00:44:25,597 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-03-18 00:44:25,600 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-18 00:44:25,603 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-03-18 00:44:25,605 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-18 00:44:25,608 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-03-18 00:44:25,610 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-03-18 00:44:25,613 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-18 00:44:25,615 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-18 00:44:25,618 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-18 00:44:25,622 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-03-18 00:44:25,624 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:25,625 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-03-18 00:44:25,626 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-03-18 00:44:26,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-03-18 00:44:26,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:26,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:27,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:27,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:27,805 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:27,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-18 00:44:27,877 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:27,879 [ scc.git] DEBUG Check current status 2026-03-18 00:44:27,879 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:27,882 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-03-18 00:44:27,882 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:27,920 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:28,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-03-18 00:44:28,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:29,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:29,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:30,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:30,047 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:30,084 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:30,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-18 00:44:30,085 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:30,087 [ scc.git] DEBUG Check current status 2026-03-18 00:44:30,087 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:30,089 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-03-18 00:44:30,089 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:30,128 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:30,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-03-18 00:44:31,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:31,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:31,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:32,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:32,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:32,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:32,309 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-18 00:44:32,309 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:32,311 [ scc.git] DEBUG Check current status 2026-03-18 00:44:32,311 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:32,313 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-03-18 00:44:32,314 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:32,352 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:32,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-03-18 00:44:33,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:33,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:34,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:34,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:34,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:34,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:34,708 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-18 00:44:34,709 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:34,711 [ scc.git] DEBUG Check current status 2026-03-18 00:44:34,711 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:34,713 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-18 00:44:34,713 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:34,753 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:35,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-03-18 00:44:35,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:36,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:36,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:36,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:36,903 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:36,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:36,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-18 00:44:36,943 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:36,945 [ scc.git] DEBUG Check current status 2026-03-18 00:44:36,945 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:36,948 [ scc.git] DEBUG 02728d0a Merge pull request #662 from will-moore/export_script_zarr 2026-03-18 00:44:36,948 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:36,988 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:37,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-03-18 00:44:37,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:38,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:38,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:39,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:39,146 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:39,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:39,185 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-18 00:44:39,185 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:39,187 [ scc.git] DEBUG Check current status 2026-03-18 00:44:39,187 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:39,189 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-03-18 00:44:39,189 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:39,228 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:39,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-03-18 00:44:40,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:40,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:40,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:41,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:41,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:41,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:41,460 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-18 00:44:41,460 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:41,462 [ scc.git] DEBUG Check current status 2026-03-18 00:44:41,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:41,465 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-03-18 00:44:41,465 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:41,502 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:41,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-03-18 00:44:42,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:42,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:43,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:43,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:43,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:43,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:43,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-18 00:44:43,758 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:43,760 [ scc.git] DEBUG Check current status 2026-03-18 00:44:43,760 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:43,763 [ scc.git] DEBUG 5e2de43 Merge pull request #510 from joshmoore/issue-509 2026-03-18 00:44:43,763 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:43,802 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:44,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-03-18 00:44:44,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:45,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:45,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:45,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:45,965 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:46,001 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:46,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-18 00:44:46,002 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:46,004 [ scc.git] DEBUG Check current status 2026-03-18 00:44:46,004 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:46,006 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-03-18 00:44:46,006 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:46,045 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:46,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-03-18 00:44:46,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:47,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:47,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:48,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:48,215 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:48,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:48,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-18 00:44:48,254 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:48,256 [ scc.git] DEBUG Check current status 2026-03-18 00:44:48,256 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:48,258 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-18 00:44:48,258 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:48,295 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:48,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-03-18 00:44:49,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:49,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:50,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:50,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:50,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:50,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:50,513 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-18 00:44:50,513 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:50,515 [ scc.git] DEBUG Check current status 2026-03-18 00:44:50,515 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:50,517 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-03-18 00:44:50,517 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:50,554 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:50,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-03-18 00:44:51,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:51,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:52,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:52,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:52,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:52,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:52,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-18 00:44:52,749 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:52,751 [ scc.git] DEBUG Check current status 2026-03-18 00:44:52,751 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:52,753 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-03-18 00:44:52,753 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:52,790 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:53,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-03-18 00:44:53,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:54,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:54,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:55,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:55,251 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:55,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:55,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-18 00:44:55,290 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:55,292 [ scc.git] DEBUG Check current status 2026-03-18 00:44:55,292 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:55,294 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-18 00:44:55,294 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:55,333 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:55,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-03-18 00:44:56,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:56,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:57,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:57,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:57,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:57,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:57,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-18 00:44:57,565 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:57,568 [ scc.git] DEBUG Check current status 2026-03-18 00:44:57,568 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:57,570 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-03-18 00:44:57,570 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:57,607 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:44:58,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-03-18 00:44:58,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:44:58,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:44:59,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:44:59,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:44:59,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:44:59,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:44:59,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-18 00:44:59,864 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:44:59,866 [ scc.git] DEBUG Check current status 2026-03-18 00:44:59,866 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:44:59,868 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-03-18 00:44:59,869 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:44:59,906 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:00,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-18 00:45:00,256 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-18 00:45:00,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-03-18 00:45:01,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:01,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:01,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:02,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:02,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:02,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:02,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-18 00:45:02,322 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:02,324 [ scc.git] DEBUG Check current status 2026-03-18 00:45:02,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:02,327 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-03-18 00:45:02,327 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:02,364 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:02,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-03-18 00:45:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:03,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:04,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:04,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:04,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:04,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:04,758 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-18 00:45:04,758 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:04,760 [ scc.git] DEBUG Check current status 2026-03-18 00:45:04,760 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:04,763 [ scc.git] DEBUG 160d894 Fix display of code 2026-03-18 00:45:04,763 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:04,800 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:05,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-03-18 00:45:05,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:06,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:06,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:06,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:06,953 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:06,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:06,990 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-18 00:45:06,990 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:06,992 [ scc.git] DEBUG Check current status 2026-03-18 00:45:06,992 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:06,994 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-18 00:45:06,994 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:07,032 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:07,032 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-03-18 00:45:07,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-03-18 00:45:07,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:08,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:08,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:09,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:09,245 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:09,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:09,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-18 00:45:09,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:09,284 [ scc.git] DEBUG Check current status 2026-03-18 00:45:09,285 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:09,287 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-03-18 00:45:09,287 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:09,324 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:09,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-18 00:45:09,655 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-18 00:45:09,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-03-18 00:45:10,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:11,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:11,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:11,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:11,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:11,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:11,893 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-18 00:45:11,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:11,895 [ scc.git] DEBUG Check current status 2026-03-18 00:45:11,895 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:11,897 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-03-18 00:45:11,897 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:11,935 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:12,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-18 00:45:12,266 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-18 00:45:12,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-03-18 00:45:13,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:13,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:13,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:14,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:14,419 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:14,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:14,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-18 00:45:14,458 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:14,460 [ scc.git] DEBUG Check current status 2026-03-18 00:45:14,460 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:14,462 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-03-18 00:45:14,463 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:14,500 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:14,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-03-18 00:45:15,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:15,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:16,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:16,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:16,686 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:16,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:16,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-18 00:45:16,724 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-03-18 00:45:16,726 [ scc.git] DEBUG Check current status 2026-03-18 00:45:16,726 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:16,728 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-03-18 00:45:16,728 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:16,766 [ scc.config] DEBUG Found remote.origin.url 2026-03-18 00:45:16,766 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-03-18 00:45:17,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-18 00:45:17,115 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-18 00:45:17,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-03-18 00:45:17,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-03-18 00:45:18,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-03-18 00:45:18,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-03-18 00:45:19,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-03-18 00:45:19,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:19,152 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:19,152 [ scc.git] DEBUG Resetting... 2026-03-18 00:45:19,152 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-03-18 00:45:19,159 [ scc.git] DEBUG HEAD is now at 1a81816 merge master -Dorg -Snone 2026-03-18 00:45:19,159 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-03-18 00:45:19,212 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-03-18 00:45:19,229 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-03-18 00:45:19,266 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-03-18 00:45:19,284 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-03-18 00:45:19,298 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-03-18 00:45:19,316 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-03-18 00:45:19,330 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-03-18 00:45:19,344 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-03-18 00:45:19,355 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-03-18 00:45:19,380 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-03-18 00:45:19,383 [ scc.git] DEBUG Check current status 2026-03-18 00:45:19,383 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-03-18 00:45:19,385 [ scc.git] DEBUG 1a81816 merge master -Dorg -Snone 2026-03-18 00:45:19,386 [ scc.git] DEBUG Calling 'git submodule status' 2026-03-18 00:45:19,431 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-03-18 00:45:19,433 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-03-18 00:45:19,436 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-03-18 00:45:19,439 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-03-18 00:45:19,443 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-03-18 00:45:19,445 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-03-18 00:45:19,448 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-03-18 00:45:19,451 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-03-18 00:45:19,454 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-03-18 00:45:19,457 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-03-18 00:45:19,460 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-03-18 00:45:19,462 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-03-18 00:45:19,466 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-03-18 00:45:19,469 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-03-18 00:45:19,472 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-03-18 00:45:19,475 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-03-18 00:45:19,477 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-03-18 00:45:19,480 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-03-18 00:45:19,482 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-03-18 00:45:19,485 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-03-18 00:45:19,487 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-03-18 00:45:19,491 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-03-18 00:45:19,492 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-03-18 00:45:19,492 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-03-18 00:45:19,492 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-03-18 00:45:19,492 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-03-18 00:45:19,492 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-03-18 00:45:19,492 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-03-18 00:45:19,492 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:45:19,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-03-18 00:45:20,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-03-18 00:45:20,246 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:45:20,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-18 00:45:21,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:21,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74 HTTP/1.1" 200 None 2026-03-18 00:45:22,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:45:22,323 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-18 00:45:22,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-03-18 00:45:22,854 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:45:23,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-18 00:45:23,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:24,504 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51 HTTP/1.1" 200 None 2026-03-18 00:45:24,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:45:24,941 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-18 00:45:25,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-03-18 00:45:25,460 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:45:26,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-18 00:45:26,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:27,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2 HTTP/1.1" 200 None 2026-03-18 00:45:27,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:45:27,560 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-18 00:45:27,561 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:45:27,561 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:27,561 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:27,563 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:45:27,565 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:45:27,565 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:45:27,568 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:45:27,571 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:27,571 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-03-18 00:45:28,005 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:45:28,005 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-03-18 00:45:28,009 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-03-18 00:45:28,377 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:45:28,377 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-03-18 00:45:28,381 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-03-18 00:45:28,835 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-03-18 00:45:28,835 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-03-18 00:45:28,839 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:45:28,839 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:28,839 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:28,842 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-18 00:45:28,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:28,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-03-18 00:45:28,850 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:29,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:45:29,021 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-18 00:45:29,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:29,026 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-03-18 00:45:29,028 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:29,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:45:29,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-18 00:45:29,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:29,443 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-03-18 00:45:29,446 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:29,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:45:29,863 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:45:29,913 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:29,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:29,916 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:45:30,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-03-18 00:45:30,286 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:45:30,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-18 00:45:30,287 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:30,287 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:30,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:45:30,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:45:30,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:45:30,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:45:30,298 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:30,298 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:45:30,298 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:30,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:30,300 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:45:30,338 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:30,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:30,340 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:30,376 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:45:30,379 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb5a3b10> has no local changes 2026-03-18 00:45:30,379 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:45:30,385 [ scc.git] DEBUG [detached HEAD 67ccb37] merge master -Dorg -Ssuccess-only 2026-03-18 00:45:30,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:30,385 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:45:30,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-03-18 00:45:31,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-03-18 00:45:31,462 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:45:32,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-18 00:45:32,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:33,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:45:33,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4 HTTP/1.1" 200 None 2026-03-18 00:45:34,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:45:34,033 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:45:34,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-03-18 00:45:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-03-18 00:45:35,113 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:45:35,114 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-18 00:45:35,114 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:35,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:35,116 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:45:35,118 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:45:35,119 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:45:35,121 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:45:35,124 [ scc.git] DEBUG Already up to date. 2026-03-18 00:45:35,124 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-03-18 00:45:35,523 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-03-18 00:45:35,523 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-03-18 00:45:35,527 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:45:35,527 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:35,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:35,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-18 00:45:35,531 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:35,533 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-03-18 00:45:35,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:45:35,542 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:45:35,542 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:45:35,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:45:35,723 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:45:35,761 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:35,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:35,764 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:35,802 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:45:35,805 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb7623d0> has no local changes 2026-03-18 00:45:35,805 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:45:35,811 [ scc.git] DEBUG [detached HEAD 75de39d] merge master -Dorg -Ssuccess-only 2026-03-18 00:45:35,811 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:35,811 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:45:36,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-03-18 00:45:36,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-03-18 00:45:37,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-03-18 00:45:37,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-18 00:45:38,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:38,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:45:39,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99 HTTP/1.1" 200 None 2026-03-18 00:45:39,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:45:39,764 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-03-18 00:45:40,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-03-18 00:45:40,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-03-18 00:45:40,928 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:45:40,928 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-18 00:45:40,928 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:40,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:40,931 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:45:40,933 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:45:40,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:45:40,936 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:45:40,944 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-03-18 00:45:41,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-03-18 00:45:42,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-03-18 00:45:43,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-03-18 00:45:43,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-03-18 00:45:43,846 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-03-18 00:45:44,542 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-03-18 00:45:44,542 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-03-18 00:45:44,547 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:45:44,547 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:44,547 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:44,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-18 00:45:44,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:44,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-03-18 00:45:44,563 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-03-18 00:45:44,563 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:45:44,566 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-03-18 00:45:44,566 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-03-18 00:45:44,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:45:44,767 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:45:44,804 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:45:44,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:45:44,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:45:44,844 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:45:44,847 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb618ad0> has no local changes 2026-03-18 00:45:44,847 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:45:44,853 [ scc.git] DEBUG [detached HEAD 796e8ce] merge master -Dorg -Ssuccess-only 2026-03-18 00:45:44,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:45:44,853 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:45:45,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-03-18 00:45:45,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-03-18 00:45:46,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-18 00:45:46,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:47,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:45:47,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-18 00:45:48,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:48,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c HTTP/1.1" 200 None 2026-03-18 00:45:49,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-03-18 00:45:49,296 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-03-18 00:45:49,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-03-18 00:45:50,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-03-18 00:45:50,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-18 00:45:51,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:51,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:45:52,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-18 00:45:52,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:53,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac HTTP/1.1" 200 None 2026-03-18 00:45:53,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-03-18 00:45:53,592 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-18 00:45:54,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-03-18 00:45:54,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-03-18 00:45:55,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-03-18 00:45:55,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-03-18 00:45:56,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-18 00:45:56,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:57,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:45:57,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-18 00:45:58,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-03-18 00:45:58,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae HTTP/1.1" 200 None 2026-03-18 00:45:59,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-03-18 00:45:59,218 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-18 00:45:59,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-03-18 00:46:00,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-03-18 00:46:00,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-18 00:46:01,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:46:01,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:46:02,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-18 00:46:02,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-03-18 00:46:03,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c HTTP/1.1" 200 None 2026-03-18 00:46:03,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-03-18 00:46:03,805 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-03-18 00:46:04,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-03-18 00:46:04,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-03-18 00:46:05,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-03-18 00:46:05,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-03-18 00:46:06,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-03-18 00:46:06,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-03-18 00:46:07,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-03-18 00:46:07,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-03-18 00:46:07,850 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:46:07,850 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-18 00:46:07,851 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:07,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:07,853 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:46:07,856 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:46:07,856 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:46:07,859 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:46:07,871 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-03-18 00:46:08,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-03-18 00:46:09,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-03-18 00:46:09,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-03-18 00:46:10,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-03-18 00:46:11,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-03-18 00:46:12,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-03-18 00:46:12,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-03-18 00:46:13,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-03-18 00:46:14,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-03-18 00:46:14,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-03-18 00:46:15,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-03-18 00:46:16,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-03-18 00:46:16,280 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-03-18 00:46:17,035 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-18 00:46:17,035 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-03-18 00:46:17,039 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-03-18 00:46:17,796 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-18 00:46:17,797 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-03-18 00:46:17,801 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-03-18 00:46:18,152 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-18 00:46:18,152 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-03-18 00:46:18,156 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-03-18 00:46:18,528 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-03-18 00:46:18,529 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-03-18 00:46:18,532 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:46:18,532 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:18,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:18,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-18 00:46:18,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:18,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging README.rst 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-18 00:46:18,839 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:46:18,840 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:46:18,843 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:18,848 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-18 00:46:19,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:19,030 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-03-18 00:46:19,033 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:19,036 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/cli.py - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - src/omero_zarr/raw_pixels.py - src/omero_zarr/util.py --conflicts 2026-03-18 00:46:19,038 [ scc.config] DEBUG Found github.token 2026-03-18 00:46:19,038 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-03-18 00:46:19,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-18 00:46:19,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:19,044 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-18 00:46:19,331 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-03-18 00:46:19,331 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-03-18 00:46:19,331 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-03-18 00:46:19,331 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-03-18 00:46:19,331 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:46:19,331 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:46:19,334 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:19,338 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-18 00:46:19,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:19,671 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-03-18 00:46:19,675 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:19,678 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-03-18 00:46:19,680 [ scc.config] DEBUG Found github.token 2026-03-18 00:46:19,680 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-03-18 00:46:19,680 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-18 00:46:19,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:19,685 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-18 00:46:20,036 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-03-18 00:46:20,036 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-03-18 00:46:20,036 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-03-18 00:46:20,036 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-03-18 00:46:20,036 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-03-18 00:46:20,036 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:46:20,036 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:46:20,039 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:20,043 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-03-18 00:46:20,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:20,218 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-03-18 00:46:20,222 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-03-18 00:46:20,224 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-03-18 00:46:20,226 [ scc.config] DEBUG Found github.token 2026-03-18 00:46:20,226 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-03-18 00:46:20,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-18 00:46:20,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:20,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-03-18 00:46:20,238 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:46:20,241 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-03-18 00:46:20,241 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-03-18 00:46:20,241 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-03-18 00:46:20,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:20,664 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:46:20,702 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:20,702 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:20,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:46:20,741 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:46:20,745 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb61dad0> has no local changes 2026-03-18 00:46:20,745 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:46:20,751 [ scc.git] DEBUG [detached HEAD a198a14] merge master -Dorg -Ssuccess-only 2026-03-18 00:46:20,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:46:20,751 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:46:21,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-03-18 00:46:21,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/669 HTTP/1.1" 200 None 2026-03-18 00:46:22,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe9518498d46366549262a608d0b0cc7572767ec HTTP/1.1" 200 None 2026-03-18 00:46:22,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe9518498d46366549262a608d0b0cc7572767ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:46:23,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fe9518498d46366549262a608d0b0cc7572767ec/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:46:23,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/666 HTTP/1.1" 200 None 2026-03-18 00:46:24,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ab12d66455b02802a789e14af0d13ac20b5216fd HTTP/1.1" 200 None 2026-03-18 00:46:24,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ab12d66455b02802a789e14af0d13ac20b5216fd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:46:25,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ab12d66455b02802a789e14af0d13ac20b5216fd/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:46:25,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/ab12d66455b02802a789e14af0d13ac20b5216fd HTTP/1.1" 200 None 2026-03-18 00:46:26,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/ab12d66455b02802a789e14af0d13ac20b5216fd?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:46:26,312 [ scc.repo] DEBUG - PR 666 will-moore 'Standalone app' 2026-03-18 00:46:26,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-03-18 00:46:27,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-03-18 00:46:27,270 [ scc.repo] DEBUG # ... Include label: include 2026-03-18 00:46:27,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-18 00:46:28,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:46:28,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:46:29,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234 HTTP/1.1" 200 None 2026-03-18 00:46:29,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:46:29,667 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-18 00:46:30,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-03-18 00:46:30,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-03-18 00:46:30,678 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:46:30,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-18 00:46:30,678 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:30,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:30,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:46:30,683 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:46:30,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:46:30,688 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:46:30,730 [ scc.git] DEBUG Updating 9cc36cde..02728d0a 2026-03-18 00:46:31,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-03-18 00:46:32,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-03-18 00:46:32,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-03-18 00:46:33,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-03-18 00:46:34,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-03-18 00:46:34,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-03-18 00:46:35,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-03-18 00:46:36,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-03-18 00:46:37,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-03-18 00:46:37,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-03-18 00:46:38,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-03-18 00:46:39,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-03-18 00:46:40,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-03-18 00:46:40,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-03-18 00:46:41,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-03-18 00:46:42,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-03-18 00:46:42,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-03-18 00:46:43,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-03-18 00:46:44,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-03-18 00:46:45,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-03-18 00:46:46,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-03-18 00:46:46,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-03-18 00:46:47,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-03-18 00:46:48,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-03-18 00:46:48,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-03-18 00:46:49,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-03-18 00:46:50,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-03-18 00:46:51,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-03-18 00:46:51,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-03-18 00:46:52,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-03-18 00:46:53,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-03-18 00:46:54,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-03-18 00:46:54,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-03-18 00:46:55,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-03-18 00:46:55,609 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-03-18 00:46:56,090 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-18 00:46:56,090 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-03-18 00:46:56,093 [ scc.git] DEBUG Calling 'git fetch origin pull/666/head' 2026-03-18 00:46:56,790 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-03-18 00:46:56,790 [ scc.git] DEBUG * branch refs/pull/666/head -> FETCH_HEAD 2026-03-18 00:46:56,793 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:46:56,793 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:56,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:56,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-18 00:46:56,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:56,807 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-03-18 00:46:57,077 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-03-18 00:46:57,077 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-18 00:46:57,077 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-18 00:46:57,078 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:46:57,083 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-03-18 00:46:57,083 [ scc.git] DEBUG src/index.html | 11 ++ 2026-03-18 00:46:57,083 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-03-18 00:46:57,083 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-03-18 00:46:57,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:57,269 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ab12d66455b02802a789e14af0d13ac20b5216fd' 2026-03-18 00:46:57,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:57,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 666 (Standalone app) ab12d66455b02802a789e14af0d13ac20b5216fd' 2026-03-18 00:46:57,295 [ scc.git] DEBUG Auto-merging src/index.html 2026-03-18 00:46:57,296 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-03-18 00:46:57,296 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:46:57,303 [ scc.git] DEBUG .github/workflows/pages.yml | 28 ++++++++ 2026-03-18 00:46:57,303 [ scc.git] DEBUG .gitignore | 1 + 2026-03-18 00:46:57,303 [ scc.git] DEBUG deploy_ghpages.sh | 7 ++ 2026-03-18 00:46:57,303 [ scc.git] DEBUG omero_figure/views.py | 8 ++- 2026-03-18 00:46:57,303 [ scc.git] DEBUG package.json | 2 + 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/css/figure.css | 3 +- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/index.html | 80 +++++++++++++++++++-- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/main.js | 36 +++++++--- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/models/figure_model.js | 25 +++++++ 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/channel_slider_view.js | 15 ++-- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/figure_view.js | 107 ++++++++++++++++++++--------- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/lutpicker.js | 34 +++++++-- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/modal_views.js | 4 +- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/open_local_file_modal.js | 73 ++++++++++++++++++++ 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/js/views/util.js | 13 ++++ 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/templates/channel_slider.template.html | 4 +- 2026-03-18 00:46:57,303 [ scc.git] DEBUG src/templates/lut_picker.template.html | 6 +- 2026-03-18 00:46:57,303 [ scc.git] DEBUG vite.config.js | 12 +++- 2026-03-18 00:46:57,303 [ scc.git] DEBUG 18 files changed, 395 insertions(+), 63 deletions(-) 2026-03-18 00:46:57,303 [ scc.git] DEBUG create mode 100644 .github/workflows/pages.yml 2026-03-18 00:46:57,303 [ scc.git] DEBUG create mode 100755 deploy_ghpages.sh 2026-03-18 00:46:57,303 [ scc.git] DEBUG create mode 100644 src/js/views/open_local_file_modal.js 2026-03-18 00:46:57,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:46:57,698 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:46:57,737 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:46:57,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:46:57,739 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:46:57,775 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:46:57,781 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb636850> has no local changes 2026-03-18 00:46:57,781 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (status: failure) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..02728d0a Previously merged: - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 666 will-moore 'Standalone app' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:46:57,790 [ scc.git] DEBUG [detached HEAD 1e964ff3] merge master -Dorg -Ssuccess-only 2026-03-18 00:46:57,790 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:46:57,790 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:46:58,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-03-18 00:46:58,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-03-18 00:46:58,725 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:46:59,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-18 00:46:59,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:00,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:00,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c HTTP/1.1" 200 None 2026-03-18 00:47:01,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:01,252 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:47:01,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-03-18 00:47:02,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-03-18 00:47:02,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-18 00:47:03,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:03,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2026-03-18 00:47:04,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:04,287 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-03-18 00:47:04,287 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:47:04,288 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-18 00:47:04,288 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:04,288 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:04,290 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:47:04,292 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:47:04,292 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:47:04,295 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:47:04,298 [ scc.git] DEBUG Already up to date. 2026-03-18 00:47:04,298 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-03-18 00:47:04,634 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-18 00:47:04,634 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-03-18 00:47:04,638 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-03-18 00:47:04,899 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-03-18 00:47:04,899 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-03-18 00:47:04,903 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:47:04,903 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:04,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:04,905 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-18 00:47:04,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:04,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-03-18 00:47:04,929 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-03-18 00:47:04,930 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:04,933 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-03-18 00:47:04,933 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-03-18 00:47:05,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:05,111 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-18 00:47:05,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:05,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-03-18 00:47:05,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:05,125 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:47:05,125 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:47:05,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:05,531 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:47:05,569 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:05,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:05,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:47:05,609 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:47:05,612 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb65c290> has no local changes 2026-03-18 00:47:05,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:47:05,618 [ scc.git] DEBUG [detached HEAD 37f8412] merge master -Dorg -Ssuccess-only 2026-03-18 00:47:05,618 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:47:05,618 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:47:06,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-03-18 00:47:06,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-03-18 00:47:07,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-03-18 00:47:07,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-03-18 00:47:07,817 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:08,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-18 00:47:08,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:09,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:09,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062 HTTP/1.1" 200 None 2026-03-18 00:47:10,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:10,304 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-18 00:47:10,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-03-18 00:47:11,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-03-18 00:47:11,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-03-18 00:47:11,826 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:12,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-18 00:47:12,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:13,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d HTTP/1.1" 200 None 2026-03-18 00:47:13,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:13,814 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-18 00:47:14,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-03-18 00:47:14,310 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:14,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-18 00:47:15,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:15,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c HTTP/1.1" 200 None 2026-03-18 00:47:16,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:16,313 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-18 00:47:16,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-03-18 00:47:16,813 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:17,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-18 00:47:17,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:18,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None 2026-03-18 00:47:18,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:18,831 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-18 00:47:19,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-03-18 00:47:19,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-03-18 00:47:19,763 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:20,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-18 00:47:20,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:21,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None 2026-03-18 00:47:21,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:21,777 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-18 00:47:22,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-03-18 00:47:22,253 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:22,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-18 00:47:23,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:23,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None 2026-03-18 00:47:24,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:24,145 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-18 00:47:24,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-03-18 00:47:24,635 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:47:25,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-18 00:47:25,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:26,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None 2026-03-18 00:47:26,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:26,601 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-18 00:47:26,601 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:47:26,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-18 00:47:26,601 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:26,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:26,604 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:47:26,606 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:47:26,606 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:47:26,609 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:47:26,611 [ scc.git] DEBUG Already up to date. 2026-03-18 00:47:26,611 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-03-18 00:47:26,889 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:26,889 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-03-18 00:47:26,893 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-03-18 00:47:27,398 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:27,398 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-03-18 00:47:27,402 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-03-18 00:47:27,742 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:27,742 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-03-18 00:47:27,745 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-03-18 00:47:28,090 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:28,090 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-03-18 00:47:28,094 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-03-18 00:47:28,448 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:28,448 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-03-18 00:47:28,452 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-03-18 00:47:28,811 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:28,811 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-03-18 00:47:28,815 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-03-18 00:47:29,157 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-03-18 00:47:29,157 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-03-18 00:47:29,161 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:47:29,161 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:29,161 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:29,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-18 00:47:29,166 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:29,168 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-03-18 00:47:29,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:29,180 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-03-18 00:47:29,180 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-03-18 00:47:29,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:29,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-18 00:47:29,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:29,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-03-18 00:47:29,382 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:29,383 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:29,387 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-03-18 00:47:29,387 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-03-18 00:47:29,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:29,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-18 00:47:29,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:29,797 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-18 00:47:29,855 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:29,855 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-18 00:47:29,855 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:47:29,855 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:47:29,858 [ scc.git] DEBUG Calling 'git reset --hard 076f4ff05f5ff3918ed065152a4930e99da097a2' 2026-03-18 00:47:29,862 [ scc.git] DEBUG HEAD is now at 076f4ff merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-03-18 00:47:30,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:30,219 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-03-18 00:47:30,221 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-18 00:47:30,224 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-03-18 00:47:30,226 [ scc.config] DEBUG Found github.token 2026-03-18 00:47:30,226 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-03-18 00:47:30,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-18 00:47:30,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:30,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-03-18 00:47:30,246 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:30,247 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:30,252 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-03-18 00:47:30,252 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-03-18 00:47:30,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:30,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-18 00:47:30,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:30,644 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-03-18 00:47:30,659 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:30,660 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:47:30,664 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-03-18 00:47:30,664 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-03-18 00:47:31,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:31,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-18 00:47:31,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:31,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-18 00:47:31,151 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:31,151 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-18 00:47:31,151 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:47:31,152 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:47:31,154 [ scc.git] DEBUG Calling 'git reset --hard 01377afaddfcb17aa184f1ff0681cf597a1e2517' 2026-03-18 00:47:31,158 [ scc.git] DEBUG HEAD is now at 01377af merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-18 00:47:31,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:31,488 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-03-18 00:47:31,491 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-18 00:47:31,493 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-03-18 00:47:31,496 [ scc.config] DEBUG Found github.token 2026-03-18 00:47:31,496 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-03-18 00:47:31,496 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-18 00:47:31,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:31,501 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-18 00:47:31,520 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:47:31,520 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-03-18 00:47:31,520 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:47:31,520 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:47:31,523 [ scc.git] DEBUG Calling 'git reset --hard 01377afaddfcb17aa184f1ff0681cf597a1e2517' 2026-03-18 00:47:31,527 [ scc.git] DEBUG HEAD is now at 01377af merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-03-18 00:47:31,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:47:31,917 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-03-18 00:47:31,919 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-03-18 00:47:31,922 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-03-18 00:47:31,924 [ scc.config] DEBUG Found github.token 2026-03-18 00:47:31,924 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-03-18 00:47:31,924 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:47:31,962 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:31,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:31,964 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:47:32,000 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:47:32,004 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb644d90> has no local changes 2026-03-18 00:47:32,004 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:47:32,010 [ scc.git] DEBUG [detached HEAD 1659ec3] merge master -Dorg -Ssuccess-only 2026-03-18 00:47:32,010 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:47:32,011 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:47:32,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-03-18 00:47:33,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/514 HTTP/1.1" 200 None 2026-03-18 00:47:33,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-18 00:47:34,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:34,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:35,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/f29e3950325423129b309fdefc7851ee0dd46e26 HTTP/1.1" 200 None 2026-03-18 00:47:35,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/f29e3950325423129b309fdefc7851ee0dd46e26?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:35,510 [ scc.repo] DEBUG - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-18 00:47:35,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/513 HTTP/1.1" 200 None 2026-03-18 00:47:36,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-18 00:47:36,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:37,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:37,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/aebb6273b9267a47a47363208fa97dc9c638a688 HTTP/1.1" 200 None 2026-03-18 00:47:38,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/aebb6273b9267a47a47363208fa97dc9c638a688?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:38,354 [ scc.repo] DEBUG - PR 513 jburel 'Bump Python version' 2026-03-18 00:47:38,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/512 HTTP/1.1" 200 None 2026-03-18 00:47:39,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-18 00:47:39,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:40,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:40,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/ec8f9e716c574a715529da53dff61ef178020c43 HTTP/1.1" 200 None 2026-03-18 00:47:41,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/ec8f9e716c574a715529da53dff61ef178020c43?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:41,270 [ scc.repo] DEBUG - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-18 00:47:41,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-03-18 00:47:42,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-03-18 00:47:42,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-03-18 00:47:43,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-03-18 00:47:43,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-03-18 00:47:44,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-03-18 00:47:44,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-03-18 00:47:45,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-03-18 00:47:45,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-18 00:47:46,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:46,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2026-03-18 00:47:47,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:47,146 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-18 00:47:47,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2026-03-18 00:47:48,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2026-03-18 00:47:48,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-18 00:47:49,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:49,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2026-03-18 00:47:50,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:50,208 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2026-03-18 00:47:50,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-03-18 00:47:51,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-03-18 00:47:51,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-18 00:47:52,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:52,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2026-03-18 00:47:53,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:47:53,239 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-03-18 00:47:53,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-03-18 00:47:54,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-03-18 00:47:54,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97 HTTP/1.1" 200 None 2026-03-18 00:47:55,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:47:55,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:47:55,818 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:47:55,818 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-18 00:47:55,818 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:47:55,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:47:55,821 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:47:55,823 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:47:55,823 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:47:55,826 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:47:55,833 [ scc.git] DEBUG Updating 7a798ce..5e2de43 2026-03-18 00:47:56,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-03-18 00:47:57,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-03-18 00:47:57,251 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-03-18 00:47:57,783 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:47:57,783 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-03-18 00:47:57,787 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2026-03-18 00:47:58,434 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:47:58,434 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2026-03-18 00:47:58,438 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-03-18 00:47:58,833 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:47:58,833 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-03-18 00:47:58,837 [ scc.git] DEBUG Calling 'git fetch origin pull/512/head' 2026-03-18 00:47:59,223 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:47:59,223 [ scc.git] DEBUG * branch refs/pull/512/head -> FETCH_HEAD 2026-03-18 00:47:59,227 [ scc.git] DEBUG Calling 'git fetch origin pull/513/head' 2026-03-18 00:47:59,602 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:47:59,602 [ scc.git] DEBUG * branch refs/pull/513/head -> FETCH_HEAD 2026-03-18 00:47:59,606 [ scc.git] DEBUG Calling 'git fetch origin pull/514/head' 2026-03-18 00:48:00,017 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-03-18 00:48:00,017 [ scc.git] DEBUG * branch refs/pull/514/head -> FETCH_HEAD 2026-03-18 00:48:00,021 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:00,021 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:00,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:00,024 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-18 00:48:00,027 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:00,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-03-18 00:48:00,040 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-03-18 00:48:00,040 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-03-18 00:48:00,041 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:00,044 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-03-18 00:48:00,044 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-03-18 00:48:00,044 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-03-18 00:48:00,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:00,221 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-18 00:48:00,225 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:00,227 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2026-03-18 00:48:00,246 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-18 00:48:00,246 [ scc.git] DEBUG Auto-merging src/app/context.js 2026-03-18 00:48:00,246 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-03-18 00:48:00,246 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2026-03-18 00:48:00,247 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:00,251 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2026-03-18 00:48:00,251 [ scc.git] DEBUG src/app/context.js | 6 +- 2026-03-18 00:48:00,251 [ scc.git] DEBUG src/app/header.html | 5 + 2026-03-18 00:48:00,251 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2026-03-18 00:48:00,251 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2026-03-18 00:48:00,251 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2026-03-18 00:48:00,251 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2026-03-18 00:48:00,251 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2026-03-18 00:48:00,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:00,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-18 00:48:00,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:00,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-03-18 00:48:00,679 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-03-18 00:48:00,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:00,683 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-03-18 00:48:00,683 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-03-18 00:48:00,683 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-03-18 00:48:01,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:01,087 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-18 00:48:01,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:01,093 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 512 (Replace manual changelog by automated GH release step) ec8f9e716c574a715529da53dff61ef178020c43' 2026-03-18 00:48:01,116 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:01,119 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 5 + 2026-03-18 00:48:01,119 [ scc.git] DEBUG CHANGELOG.md | 261 ------------------------------------- 2026-03-18 00:48:01,119 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 261 deletions(-) 2026-03-18 00:48:01,119 [ scc.git] DEBUG delete mode 100644 CHANGELOG.md 2026-03-18 00:48:01,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:01,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-18 00:48:01,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:01,520 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 513 (Bump Python version) aebb6273b9267a47a47363208fa97dc9c638a688' 2026-03-18 00:48:01,529 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-18 00:48:01,530 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:01,533 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 4 ++-- 2026-03-18 00:48:01,533 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2026-03-18 00:48:01,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:01,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-18 00:48:01,943 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:01,946 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 514 (Fix where interpolate_pixels server config is read from) f29e3950325423129b309fdefc7851ee0dd46e26' 2026-03-18 00:48:02,027 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-03-18 00:48:02,027 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:02,031 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 3 ++- 2026-03-18 00:48:02,031 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 1 deletion(-) 2026-03-18 00:48:02,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:02,370 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:02,408 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:02,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:02,410 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:02,447 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:02,451 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb63e690> has no local changes 2026-03-18 00:48:02,451 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:02,458 [ scc.git] DEBUG [detached HEAD 7bd54b8] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:02,458 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:02,459 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:02,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-03-18 00:48:03,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-03-18 00:48:03,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-03-18 00:48:03,988 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:04,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-18 00:48:05,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:05,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:06,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99 HTTP/1.1" 200 None 2026-03-18 00:48:06,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:06,655 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:48:07,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-03-18 00:48:07,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-18 00:48:08,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:08,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None 2026-03-18 00:48:09,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:09,055 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:48:09,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-03-18 00:48:10,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-03-18 00:48:10,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-18 00:48:10,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:11,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2026-03-18 00:48:11,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:11,933 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-03-18 00:48:11,933 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:11,933 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-18 00:48:11,934 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:11,934 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:11,936 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:11,939 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:11,939 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:11,942 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:11,944 [ scc.git] DEBUG Already up to date. 2026-03-18 00:48:11,945 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-18 00:48:12,338 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-18 00:48:12,338 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-18 00:48:12,341 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-03-18 00:48:12,683 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-18 00:48:12,683 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-03-18 00:48:12,687 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-03-18 00:48:12,963 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-03-18 00:48:12,963 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-03-18 00:48:12,967 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:12,967 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:12,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:12,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-18 00:48:12,972 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:12,975 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-03-18 00:48:12,982 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:12,985 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-03-18 00:48:12,985 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-03-18 00:48:12,985 [ scc.git] DEBUG requirements.txt | 2 +- 2026-03-18 00:48:12,985 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-03-18 00:48:12,985 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-03-18 00:48:12,985 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-03-18 00:48:13,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:13,183 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-18 00:48:13,186 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:13,189 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-03-18 00:48:13,196 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:13,199 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:48:13,199 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:48:13,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:13,600 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-18 00:48:13,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:13,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-18 00:48:13,627 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-18 00:48:13,627 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-18 00:48:13,627 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:48:13,627 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:48:13,630 [ scc.git] DEBUG Calling 'git reset --hard 9f95bb332b471e1b867ca024c9ed9ed6841335dc' 2026-03-18 00:48:13,633 [ scc.git] DEBUG HEAD is now at 9f95bb3 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-03-18 00:48:14,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:14,033 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-03-18 00:48:14,035 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-03-18 00:48:14,037 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-03-18 00:48:14,039 [ scc.config] DEBUG Found github.token 2026-03-18 00:48:14,039 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-03-18 00:48:14,039 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:14,078 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:14,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:14,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:14,117 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:14,120 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb678bd0> has no local changes 2026-03-18 00:48:14,120 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:14,126 [ scc.git] DEBUG [detached HEAD bf571dd] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:14,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:14,126 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:14,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-03-18 00:48:15,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-03-18 00:48:15,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-03-18 00:48:16,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-18 00:48:16,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:17,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f HTTP/1.1" 200 None 2026-03-18 00:48:17,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:17,537 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-18 00:48:18,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-03-18 00:48:18,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-03-18 00:48:19,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-18 00:48:19,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:20,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2026-03-18 00:48:20,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:20,471 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-18 00:48:20,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-03-18 00:48:21,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-03-18 00:48:21,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-18 00:48:22,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:22,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2026-03-18 00:48:23,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:23,324 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-18 00:48:23,324 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:23,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-18 00:48:23,325 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:23,325 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:23,327 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:23,330 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:23,330 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:23,332 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:23,338 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-03-18 00:48:24,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-03-18 00:48:24,187 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-03-18 00:48:24,552 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-18 00:48:24,552 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-03-18 00:48:24,555 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-03-18 00:48:24,986 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-18 00:48:24,986 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-03-18 00:48:24,990 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-03-18 00:48:25,368 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-03-18 00:48:25,368 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-03-18 00:48:25,372 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:25,372 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:25,372 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:25,375 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-18 00:48:25,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:25,381 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-18 00:48:25,395 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-03-18 00:48:25,395 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-03-18 00:48:25,395 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-18 00:48:25,395 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-18 00:48:25,395 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:48:25,395 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:48:25,397 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-18 00:48:25,401 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-18 00:48:25,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:25,579 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-03-18 00:48:25,583 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-18 00:48:25,586 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/cli.py - src/omero_metadata/populate.py --conflicts 2026-03-18 00:48:25,588 [ scc.config] DEBUG Found github.token 2026-03-18 00:48:25,588 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-03-18 00:48:25,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-18 00:48:25,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:25,594 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-18 00:48:25,610 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-03-18 00:48:25,610 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-03-18 00:48:25,610 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-03-18 00:48:25,610 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:48:25,610 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:48:25,613 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-18 00:48:25,617 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-03-18 00:48:25,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:26,000 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-03-18 00:48:26,003 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-03-18 00:48:26,006 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-03-18 00:48:26,008 [ scc.config] DEBUG Found github.token 2026-03-18 00:48:26,008 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-03-18 00:48:26,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-18 00:48:26,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:26,012 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-03-18 00:48:26,020 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:26,024 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-03-18 00:48:26,024 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-03-18 00:48:26,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:26,429 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:26,468 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:26,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:26,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:26,507 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:26,510 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb849ea50> has no local changes 2026-03-18 00:48:26,510 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:26,516 [ scc.git] DEBUG [detached HEAD ae2291e] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:26,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:26,517 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:27,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-03-18 00:48:27,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-03-18 00:48:28,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-18 00:48:28,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:29,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:29,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None 2026-03-18 00:48:30,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:30,009 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:48:30,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-03-18 00:48:30,500 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:31,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-18 00:48:31,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:32,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:32,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None 2026-03-18 00:48:33,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:33,081 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-18 00:48:33,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-03-18 00:48:33,549 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:34,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-18 00:48:34,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:35,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:35,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None 2026-03-18 00:48:35,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:35,974 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-18 00:48:36,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-03-18 00:48:36,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-03-18 00:48:37,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-03-18 00:48:37,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-03-18 00:48:38,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-03-18 00:48:38,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-03-18 00:48:39,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-03-18 00:48:39,268 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:39,268 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-18 00:48:39,268 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:39,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:39,271 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:39,273 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:39,273 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:39,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:39,279 [ scc.git] DEBUG Already up to date. 2026-03-18 00:48:39,279 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-03-18 00:48:39,563 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-18 00:48:39,563 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-03-18 00:48:39,567 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-03-18 00:48:39,935 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-18 00:48:39,935 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-03-18 00:48:39,938 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-03-18 00:48:40,206 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-03-18 00:48:40,206 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-03-18 00:48:40,210 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:40,210 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:40,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:40,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-18 00:48:40,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:40,217 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-03-18 00:48:40,224 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:40,227 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-03-18 00:48:40,227 [ scc.git] DEBUG package.json | 2 +- 2026-03-18 00:48:40,227 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-03-18 00:48:40,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:40,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-03-18 00:48:40,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:40,412 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-03-18 00:48:40,420 [ scc.git] DEBUG Auto-merging package-lock.json 2026-03-18 00:48:40,421 [ scc.git] DEBUG Auto-merging package.json 2026-03-18 00:48:40,421 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:40,424 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-03-18 00:48:40,424 [ scc.git] DEBUG package.json | 2 +- 2026-03-18 00:48:40,424 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-03-18 00:48:40,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:40,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-18 00:48:40,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:40,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-03-18 00:48:40,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:40,844 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:48:40,845 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:48:41,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:41,251 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:41,291 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:41,291 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:41,293 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:41,331 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:41,335 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb84bcc90> has no local changes 2026-03-18 00:48:41,335 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:41,341 [ scc.git] DEBUG [detached HEAD 0a7bd80] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:41,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:41,341 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:41,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-03-18 00:48:42,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-03-18 00:48:42,211 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:42,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-18 00:48:43,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:43,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:44,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e HTTP/1.1" 200 None 2026-03-18 00:48:44,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:44,869 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:48:44,869 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:44,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-18 00:48:44,869 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:44,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:44,872 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:44,874 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:44,875 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:44,877 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:44,880 [ scc.git] DEBUG Already up to date. 2026-03-18 00:48:44,880 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-03-18 00:48:45,172 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-03-18 00:48:45,173 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-03-18 00:48:45,176 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:45,177 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:45,177 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:45,179 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-18 00:48:45,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:45,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-03-18 00:48:45,189 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:48:45,192 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:48:45,192 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:48:45,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:45,370 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:45,408 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:45,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:45,411 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:45,448 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:45,451 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb84ab1d0> has no local changes 2026-03-18 00:48:45,451 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:45,457 [ scc.git] DEBUG [detached HEAD dda1471] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:45,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:45,457 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:45,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-03-18 00:48:46,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34 HTTP/1.1" 200 None 2026-03-18 00:48:46,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/34/comments HTTP/1.1" 200 None 2026-03-18 00:48:46,984 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:47,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-18 00:48:48,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:48,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:49,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-18 00:48:49,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/149bb248277256d589ea0db597c04739e8134301?per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:50,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301 HTTP/1.1" 200 None 2026-03-18 00:48:50,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/149bb248277256d589ea0db597c04739e8134301/status HTTP/1.1" 200 None 2026-03-18 00:48:50,507 [ scc.repo] DEBUG - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:48:51,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-03-18 00:48:51,015 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:51,016 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-18 00:48:51,016 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:51,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:51,018 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:51,021 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:51,021 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:51,024 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:51,031 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-03-18 00:48:51,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-03-18 00:48:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-03-18 00:48:52,731 [ scc.git] DEBUG Calling 'git fetch origin pull/34/head' 2026-03-18 00:48:53,008 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2026-03-18 00:48:53,008 [ scc.git] DEBUG * branch refs/pull/34/head -> FETCH_HEAD 2026-03-18 00:48:53,011 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:48:53,011 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:53,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:53,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...149bb248277256d589ea0db597c04739e8134301' 2026-03-18 00:48:53,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:53,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 34 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 149bb248277256d589ea0db597c04739e8134301' 2026-03-18 00:48:53,230 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-03-18 00:48:53,230 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-03-18 00:48:53,230 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:48:53,230 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:48:53,233 [ scc.git] DEBUG Calling 'git reset --hard fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-18 00:48:53,236 [ scc.git] DEBUG HEAD is now at fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-03-18 00:48:53,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:48:53,418 [ scc.git] DEBUG Calling 'git merge-base fc9ff96901ce7b92e3ba51327ba7ba64fff76959 149bb248277256d589ea0db597c04739e8134301' 2026-03-18 00:48:53,420 [ scc.git] DEBUG Calling 'git diff --name-only bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9..fc9ff96901ce7b92e3ba51327ba7ba64fff76959' 2026-03-18 00:48:53,423 [ scc.git] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - .github/workflows/publish_pypi.yml --conflicts 2026-03-18 00:48:53,425 [ scc.config] DEBUG Found github.token 2026-03-18 00:48:53,425 [ scc.git] DEBUG Not adding comment to issue #34, already --conflicts. 2026-03-18 00:48:53,425 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:48:53,462 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:53,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:53,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:48:53,501 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:48:53,504 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb886010> has no local changes 2026-03-18 00:48:53,504 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:48:53,510 [ scc.git] DEBUG [detached HEAD 39c6276] merge master -Dorg -Ssuccess-only 2026-03-18 00:48:53,510 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:48:53,510 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:48:53,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-03-18 00:48:54,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-03-18 00:48:54,499 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:48:55,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-18 00:48:55,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:56,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:48:56,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa HTTP/1.1" 200 None 2026-03-18 00:48:57,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:57,098 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:48:57,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-03-18 00:48:58,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-03-18 00:48:58,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-18 00:48:59,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:48:59,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2026-03-18 00:48:59,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:48:59,959 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-18 00:48:59,959 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:48:59,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-18 00:48:59,960 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:48:59,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:48:59,962 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:48:59,964 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:48:59,965 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:48:59,967 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:48:59,970 [ scc.git] DEBUG Already up to date. 2026-03-18 00:48:59,970 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-18 00:49:00,371 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-18 00:49:00,371 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-18 00:49:00,375 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-18 00:49:00,872 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-03-18 00:49:00,872 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-18 00:49:00,875 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:00,876 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:00,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:00,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-18 00:49:00,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:00,883 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-18 00:49:00,894 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG Auto-merging setup.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-03-18 00:49:00,894 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:49:00,895 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:49:00,897 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-18 00:49:00,901 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-03-18 00:49:01,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:01,083 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-03-18 00:49:01,086 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-03-18 00:49:01,089 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - setup.py - omero_signup/signup_settings.py - omero_signup/views.py - omero_signup/urls.py --conflicts 2026-03-18 00:49:01,091 [ scc.config] DEBUG Found github.token 2026-03-18 00:49:01,091 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-03-18 00:49:01,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-18 00:49:01,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:01,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-03-18 00:49:01,101 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:01,104 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:49:01,104 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:49:01,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:01,520 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:01,558 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:01,558 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:01,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:01,597 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:01,600 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb65da10> has no local changes 2026-03-18 00:49:01,600 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:01,605 [ scc.git] DEBUG [detached HEAD 130df31] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:01,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:01,606 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:02,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-03-18 00:49:02,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-03-18 00:49:03,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-03-18 00:49:03,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-03-18 00:49:04,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-18 00:49:04,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:04,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None 2026-03-18 00:49:05,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:05,341 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-18 00:49:05,341 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:05,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-18 00:49:05,341 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:05,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:05,344 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:05,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:05,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:05,349 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:05,356 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-03-18 00:49:06,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-03-18 00:49:06,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-03-18 00:49:07,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-03-18 00:49:07,746 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-03-18 00:49:08,360 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-03-18 00:49:08,360 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-03-18 00:49:08,363 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:08,363 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:08,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:08,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-03-18 00:49:08,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:08,370 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-03-18 00:49:08,378 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-03-18 00:49:08,379 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:08,382 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-03-18 00:49:08,382 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-03-18 00:49:08,382 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-03-18 00:49:08,382 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-03-18 00:49:08,382 [ scc.git] DEBUG ms/test | 2 ++ 2026-03-18 00:49:08,382 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-03-18 00:49:08,382 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-03-18 00:49:08,382 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-03-18 00:49:08,382 [ scc.git] DEBUG create mode 100755 ms/test 2026-03-18 00:49:08,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:08,552 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:08,588 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:08,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:08,590 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:08,628 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:08,631 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb64ac50> has no local changes 2026-03-18 00:49:08,631 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:08,636 [ scc.git] DEBUG [detached HEAD 45da77d] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:08,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:08,637 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:09,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-03-18 00:49:09,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-03-18 00:49:09,758 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:49:10,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-18 00:49:10,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:11,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:49:11,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea HTTP/1.1" 200 None 2026-03-18 00:49:12,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:12,382 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:12,382 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:12,382 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-18 00:49:12,383 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:12,383 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:12,385 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:12,388 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:12,388 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:12,390 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:12,393 [ scc.git] DEBUG Already up to date. 2026-03-18 00:49:12,393 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-03-18 00:49:12,671 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-03-18 00:49:12,672 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-03-18 00:49:12,675 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:12,675 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:12,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:12,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-18 00:49:12,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:12,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-03-18 00:49:12,688 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:12,691 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:49:12,691 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:49:12,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:12,866 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:12,904 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:12,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:12,906 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:12,944 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:12,947 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb84d9690> has no local changes 2026-03-18 00:49:12,947 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:12,952 [ scc.git] DEBUG [detached HEAD 9e913f8] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:12,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:12,953 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:13,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-03-18 00:49:13,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-03-18 00:49:13,887 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:49:14,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-18 00:49:15,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:15,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:49:16,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902 HTTP/1.1" 200 None 2026-03-18 00:49:16,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:16,490 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:16,490 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:16,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-18 00:49:16,490 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:16,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:16,492 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:16,494 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:16,494 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:16,497 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:16,504 [ scc.git] DEBUG Updating deab817..160d894 2026-03-18 00:49:17,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-03-18 00:49:17,259 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-03-18 00:49:17,648 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-03-18 00:49:17,648 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-03-18 00:49:17,651 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:17,651 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:17,651 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:17,653 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-18 00:49:17,656 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:17,658 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-03-18 00:49:17,665 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:17,667 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:49:17,667 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:49:17,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:17,846 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:17,883 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:17,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:17,885 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:17,923 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:17,925 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb6799d0> has no local changes 2026-03-18 00:49:17,925 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:17,931 [ scc.git] DEBUG [detached HEAD 368aae9] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:17,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:17,932 [ scc.git] INFO Overriding base-branch from master to main 2026-03-18 00:49:17,932 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:18,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-03-18 00:49:18,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-03-18 00:49:19,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-03-18 00:49:19,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-18 00:49:20,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:20,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:49:21,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc HTTP/1.1" 200 None 2026-03-18 00:49:21,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:21,881 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-03-18 00:49:22,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-03-18 00:49:22,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-03-18 00:49:23,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-03-18 00:49:23,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-18 00:49:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:24,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2026-03-18 00:49:25,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:25,260 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-18 00:49:25,260 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:25,260 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-18 00:49:25,261 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:25,261 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:25,263 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-03-18 00:49:25,265 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:25,265 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-03-18 00:49:25,268 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-03-18 00:49:25,274 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-03-18 00:49:25,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-03-18 00:49:26,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-03-18 00:49:26,782 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-03-18 00:49:27,212 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-18 00:49:27,212 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-03-18 00:49:27,216 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-03-18 00:49:28,202 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-03-18 00:49:28,202 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-03-18 00:49:28,205 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:28,205 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:28,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:28,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-18 00:49:28,210 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:28,212 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-18 00:49:28,222 [ scc.git] DEBUG Auto-merging README.rst 2026-03-18 00:49:28,222 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-03-18 00:49:28,222 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-03-18 00:49:28,222 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-18 00:49:28,223 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-03-18 00:49:28,223 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-03-18 00:49:28,225 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-18 00:49:28,229 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-03-18 00:49:28,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:28,432 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-03-18 00:49:28,435 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-03-18 00:49:28,437 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#91](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/). See the [console output](https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-03-18 00:49:28,439 [ scc.config] DEBUG Found github.token 2026-03-18 00:49:28,439 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-03-18 00:49:28,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-18 00:49:28,442 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:28,444 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-03-18 00:49:28,452 [ scc.git] DEBUG Auto-merging README.rst 2026-03-18 00:49:28,452 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-03-18 00:49:28,453 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:28,456 [ scc.git] DEBUG README.rst | 3 + 2026-03-18 00:49:28,456 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-03-18 00:49:28,456 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-03-18 00:49:28,456 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-03-18 00:49:28,456 [ scc.git] DEBUG setup.py | 5 +- 2026-03-18 00:49:28,456 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-03-18 00:49:28,457 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-03-18 00:49:28,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:28,866 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:28,903 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:28,903 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:28,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:28,942 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:28,945 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbb8792d0> has no local changes 2026-03-18 00:49:28,945 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:28,952 [ scc.git] DEBUG [detached HEAD 102a8a8] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:28,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:28,952 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:29,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-03-18 00:49:29,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-03-18 00:49:29,903 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:49:30,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-18 00:49:31,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:31,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:49:32,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9 HTTP/1.1" 200 None 2026-03-18 00:49:32,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:32,507 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:32,507 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:32,507 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-18 00:49:32,508 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:32,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:32,510 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:32,512 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:32,512 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:32,515 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:32,518 [ scc.git] DEBUG Already up to date. 2026-03-18 00:49:32,518 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-03-18 00:49:32,800 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-03-18 00:49:32,800 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-03-18 00:49:32,804 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:32,804 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:32,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:32,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-18 00:49:32,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:32,811 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-03-18 00:49:32,817 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:32,820 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:49:32,820 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:49:32,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:33,000 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:33,038 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:33,038 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:33,041 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:33,078 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:33,081 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb84a3350> has no local changes 2026-03-18 00:49:33,081 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:33,086 [ scc.git] DEBUG [detached HEAD c7031c0] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:33,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:33,086 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:33,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-03-18 00:49:34,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-03-18 00:49:34,019 [ scc.repo] DEBUG # ... Include label: dependencies 2026-03-18 00:49:34,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-18 00:49:35,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-03-18 00:49:35,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-03-18 00:49:36,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478 HTTP/1.1" 200 None 2026-03-18 00:49:36,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-03-18 00:49:36,769 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:36,769 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:36,769 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-18 00:49:36,769 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:36,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:36,772 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:36,774 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:36,774 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:36,777 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:36,780 [ scc.git] DEBUG Already up to date. 2026-03-18 00:49:36,780 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-03-18 00:49:37,191 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-03-18 00:49:37,191 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-03-18 00:49:37,195 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:37,195 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:37,195 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-18 00:49:37,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-03-18 00:49:37,209 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-03-18 00:49:37,212 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-03-18 00:49:37,212 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-03-18 00:49:37,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:37,384 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:37,423 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:37,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:37,462 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:37,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb84a7990> has no local changes 2026-03-18 00:49:37,465 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:37,471 [ scc.git] DEBUG [detached HEAD e9e3750] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:37,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:37,471 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:37,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-03-18 00:49:37,813 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:37,813 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-18 00:49:37,813 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:37,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,815 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-03-18 00:49:37,817 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:37,817 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-03-18 00:49:37,820 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-03-18 00:49:37,823 [ scc.git] DEBUG Already up to date. 2026-03-18 00:49:37,823 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:37,823 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:37,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,825 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:37,860 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:37,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:37,862 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:37,897 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:37,900 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb85718d0> has no local changes 2026-03-18 00:49:37,900 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:37,906 [ scc.git] DEBUG [detached HEAD 01db7fc] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:37,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:37,907 [ scc.git] INFO Overriding base-branch from master to develop 2026-03-18 00:49:37,907 [ scc.repo] DEBUG ## PRs found: 2026-03-18 00:49:38,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-03-18 00:49:38,251 [ scc.repo] DEBUG ## Branches found: 2026-03-18 00:49:38,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-18 00:49:38,252 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:38,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:38,254 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-03-18 00:49:38,256 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-03-18 00:49:38,256 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-03-18 00:49:38,259 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-03-18 00:49:38,270 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-03-18 00:49:38,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-03-18 00:49:39,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-03-18 00:49:40,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-03-18 00:49:40,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-03-18 00:49:41,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-03-18 00:49:42,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-03-18 00:49:43,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-03-18 00:49:43,131 [ scc.git] DEBUG ## Unique users: [] 2026-03-18 00:49:43,131 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:43,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:43,134 [ scc.git] DEBUG Calling 'git submodule update' 2026-03-18 00:49:43,172 [ scc.git] DEBUG Get sha1 of %s 2026-03-18 00:49:43,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-03-18 00:49:43,174 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:43,210 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:43,214 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bb853b6d0> has no local changes 2026-03-18 00:49:43,214 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:43,220 [ scc.git] DEBUG [detached HEAD f97900b] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:43,221 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:43,221 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-03-18 00:49:43,290 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-03-18 00:49:43,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:43,720 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-03-18 00:49:43,722 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-03-18 00:49:44,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:44,138 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-03-18 00:49:44,140 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-03-18 00:49:44,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:44,554 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-03-18 00:49:44,556 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-03-18 00:49:45,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:45,012 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-03-18 00:49:45,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:45,429 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-03-18 00:49:45,430 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-03-18 00:49:45,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:45,886 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-03-18 00:49:45,888 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-03-18 00:49:46,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:46,318 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-03-18 00:49:46,320 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-03-18 00:49:46,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:46,736 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-03-18 00:49:46,738 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-03-18 00:49:47,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:47,162 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-03-18 00:49:47,164 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-03-18 00:49:47,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:47,592 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-03-18 00:49:47,594 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-03-18 00:49:48,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:48,018 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-03-18 00:49:48,020 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-03-18 00:49:48,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:48,457 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-03-18 00:49:48,459 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-03-18 00:49:48,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:48,885 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-03-18 00:49:49,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:49,310 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-03-18 00:49:49,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:49,732 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-03-18 00:49:49,734 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-03-18 00:49:50,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:50,159 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-03-18 00:49:50,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:50,608 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-03-18 00:49:51,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:51,031 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-03-18 00:49:51,033 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-03-18 00:49:51,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:51,449 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-03-18 00:49:51,451 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-03-18 00:49:51,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:51,879 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-03-18 00:49:51,881 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-03-18 00:49:52,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:52,312 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-03-18 00:49:52,314 [ scc.config] DEBUG Found submodule.scripts.url 2026-03-18 00:49:52,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-03-18 00:49:52,732 [ scc.config] DEBUG Found submodule.scripts.branch 2026-03-18 00:49:52,732 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-03-18 00:49:52,807 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9bbc6c6990> has local changes 2026-03-18 00:49:52,807 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 669 will-moore 'Standalone python script' (status: failure) - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..02728d0a Previously merged: - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 666 will-moore 'Standalone app' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..5e2de43 Previously merged: - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 513 jburel 'Bump Python version' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Conflicting PRs (not included): - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#91 (https://BRANCHCI.openmicroscopy.org/jenkins/job/OMERO-plugins-push/91/)' 2026-03-18 00:49:52,818 [ scc.git] DEBUG [detached HEAD bd1ad1e] merge master -Dorg -Ssuccess-only 2026-03-18 00:49:52,819 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-03-18 00:49:52,819 [ scc.merge] INFO Repository: ome/omero-plugins 2026-03-18 00:49:52,819 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-03-18 00:49:52,819 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-03-18 00:49:52,819 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-03-18 00:49:52,819 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-03-18 00:49:52,819 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-03-18 00:49:52,819 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-03-18 00:49:52,819 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,819 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-03-18 00:49:52,819 [ scc.merge] INFO 2026-03-18 00:49:52,819 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-03-18 00:49:52,820 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-03-18 00:49:52,820 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-03-18 00:49:52,820 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,820 [ scc.merge] INFO 2026-03-18 00:49:52,820 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-03-18 00:49:52,820 [ scc.merge] INFO 2026-03-18 00:49:52,820 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-03-18 00:49:52,820 [ scc.merge] INFO 2026-03-18 00:49:52,820 [ scc.merge] INFO Repository: ome/omero-figure 2026-03-18 00:49:52,820 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' (status: failure) 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-03-18 00:49:52,820 [ scc.merge] INFO Updating 9cc36cde..02728d0a 2026-03-18 00:49:52,820 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-03-18 00:49:52,820 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-03-18 00:49:52,821 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Repository: ome/omero-gallery 2026-03-18 00:49:52,821 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-03-18 00:49:52,821 [ scc.merge] INFO 2026-03-18 00:49:52,821 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-03-18 00:49:52,821 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-03-18 00:49:52,821 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-03-18 00:49:52,822 [ scc.merge] INFO Updating 7a798ce..5e2de43 2026-03-18 00:49:52,822 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Repository: ome/omero-mapr 2026-03-18 00:49:52,822 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Repository: ome/omero-metadata 2026-03-18 00:49:52,822 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-03-18 00:49:52,822 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Repository: ome/omero-parade 2026-03-18 00:49:52,822 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-03-18 00:49:52,822 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,822 [ scc.merge] INFO 2026-03-18 00:49:52,822 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-03-18 00:49:52,823 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: ome/omero-rois 2026-03-18 00:49:52,823 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-03-18 00:49:52,823 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-03-18 00:49:52,823 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 34 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: ome/omero-signup 2026-03-18 00:49:52,823 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-03-18 00:49:52,823 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-03-18 00:49:52,823 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-03-18 00:49:52,823 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: ome/omero-upload 2026-03-18 00:49:52,823 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,823 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,823 [ scc.merge] INFO 2026-03-18 00:49:52,823 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-03-18 00:49:52,823 [ scc.merge] INFO Updating deab817..160d894 2026-03-18 00:49:52,823 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-03-18 00:49:52,824 [ scc.merge] INFO Excluded PRs: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-03-18 00:49:52,824 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-03-18 00:49:52,824 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Conflicting PRs (not included): 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-03-18 00:49:52,824 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-03-18 00:49:52,824 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Merged PRs: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-03-18 00:49:52,824 [ scc.merge] INFO Already up to date. 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO Repository: ome/scripts 2026-03-18 00:49:52,824 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-03-18 00:49:52,824 [ scc.merge] INFO Previously merged: 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-03-18 00:49:52,824 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] INFO 2026-03-18 00:49:52,824 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-03-18 00:49:52,825 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-03-18 00:49:52,827 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,829 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-03-18 00:49:52,829 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-03-18 00:49:52,831 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,833 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-03-18 00:49:52,833 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,835 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-03-18 00:49:52,835 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,837 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-03-18 00:49:52,837 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,839 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-03-18 00:49:52,839 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,841 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-03-18 00:49:52,841 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-03-18 00:49:52,843 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,845 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-03-18 00:49:52,845 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-03-18 00:49:52,847 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-03-18 00:49:52,849 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,851 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-03-18 00:49:52,851 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-03-18 00:49:52,853 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-03-18 00:49:52,855 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-03-18 00:49:52,857 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,859 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-03-18 00:49:52,859 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,861 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-03-18 00:49:52,861 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,863 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-03-18 00:49:52,863 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-03-18 00:49:52,865 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,867 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-03-18 00:49:52,867 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-03-18 00:49:52,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-03-18 00:49:52,869 [ scc.git] DEBUG Calling 'git remote' 2026-03-18 00:49:52,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 2f72bd5] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 89d97f4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-03-18 00:50:39,379 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-03-18 00:50:48,660 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-03-18 00:50:51,140 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-18 00:50:56,035 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-03-18 00:51:35,998 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS