![[Jenkins]](/jenkins/static/d0200910/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 103 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.39.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 17debd0389692e2455795d3c9d15b57151d5d590 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Commit message: "Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54" > git rev-list --no-walk 17debd0389692e2455795d3c9d15b57151d5d590 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 92 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + popd ~/workspace/OMERO-plugins-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.0-py3-none-any.whl (2.1 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.0 + python3 -m pip install scc Collecting scc Using cached scc-0.19.1-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.3 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.19.1-py3-none-any.whl (48 kB) Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB) Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB) Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.6.2-py3-none-any.whl (164 kB) Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB) Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB) Using cached cryptography-42.0.8-cp39-abi3-manylinux_2_28_x86_64.whl (3.9 MB) Using cached idna-3.7-py3-none-any.whl (66 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.6.2 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-42.0.8 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.19.1 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.18 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-06-14 00:41:57,586 [ scc.config] DEBUG Found github.token 2024-06-14 00:41:57,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-14 00:41:57,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:41:58,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:41:58,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-14 00:41:58,618 [ scc.gh] DEBUG 4523 remaining from 5000 (Reset at 01:06 2024-06-14 00:41:58,619 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:41:58,623 [ scc.git] DEBUG Check current status 2024-06-14 00:41:58,623 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:41:58,626 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-14 00:41:58,627 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:41:58,675 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-14 00:41:58,678 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-14 00:41:58,681 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-14 00:41:58,684 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-14 00:41:59,027 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-14 00:41:59,030 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-14 00:41:59,033 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-14 00:41:59,036 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-14 00:41:59,040 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-14 00:41:59,043 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-14 00:41:59,046 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-14 00:41:59,048 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-14 00:41:59,052 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-14 00:41:59,055 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-14 00:41:59,069 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-14 00:41:59,072 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-14 00:41:59,075 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-14 00:41:59,077 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-14 00:41:59,080 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-14 00:41:59,083 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-14 00:41:59,086 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-14 00:41:59,090 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-14 00:41:59,094 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:41:59,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-14 00:41:59,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:00,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:00,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:01,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:01,070 [ scc.git] DEBUG Resetting... 2024-06-14 00:42:01,070 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-14 00:42:01,080 [ scc.git] DEBUG HEAD is now at 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-14 00:42:01,080 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-14 00:42:01,182 [ scc.git] DEBUG Check current status 2024-06-14 00:42:01,182 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:01,187 [ scc.git] DEBUG 17debd0 Merge pull request #372 from ome/dependabot/submodules/omero-test-infra-7688c54 2024-06-14 00:42:01,187 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:01,232 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-14 00:42:01,235 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-14 00:42:01,237 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-14 00:42:01,240 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-14 00:42:01,247 [ scc.git] DEBUG 3d9e3b87a8ef9c67e904aa985f1937b0713558b9 omero-figure (v6.2.2-170-g3d9e3b87) 2024-06-14 00:42:01,250 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-14 00:42:01,253 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-14 00:42:01,256 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-14 00:42:01,259 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-14 00:42:01,262 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-14 00:42:01,265 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-14 00:42:01,267 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-14 00:42:01,271 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-14 00:42:01,274 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-14 00:42:01,278 [ scc.git] DEBUG 7688c540375cf05252c31f216e0248b69a2659c2 omero-test-infra (v0.6.3-57-g7688c54) 2024-06-14 00:42:01,281 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-14 00:42:01,283 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-14 00:42:01,286 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-14 00:42:01,289 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-14 00:42:01,292 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-14 00:42:01,296 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-14 00:42:01,301 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-14 00:42:01,303 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-14 00:42:01,303 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-14 00:42:01,303 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-14 00:42:01,303 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-14 00:42:01,303 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-14 00:42:01,303 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:42:01,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-14 00:42:02,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None 2024-06-14 00:42:02,010 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:42:02,010 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-14 00:42:02,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-14 00:42:02,528 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:42:02,528 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-14 00:42:02,528 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:42:02,528 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:42:02,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:42:02,533 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:42:02,538 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:42:02,539 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:42:02,544 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:42:02,550 [ scc.git] DEBUG Already up to date. 2024-06-14 00:42:02,551 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-14 00:42:02,950 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-14 00:42:02,950 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-14 00:42:02,956 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head' 2024-06-14 00:42:03,349 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-14 00:42:03,349 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD 2024-06-14 00:42:03,355 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:42:03,355 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:42:03,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:42:03,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-14 00:42:03,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:42:03,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-14 00:42:03,403 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:42:03,406 [ scc.git] DEBUG omero-test-infra | 2 +- 2024-06-14 00:42:03,406 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-14 00:42:03,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:42:03,571 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-14 00:42:03,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:42:03,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-14 00:42:03,601 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:42:03,604 [ scc.git] DEBUG omero-figure | 2 +- 2024-06-14 00:42:03,604 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-06-14 00:42:03,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:42:03,973 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:42:04,219 [ scc.git] DEBUG Submodule path 'omero-figure': checked out 'ffc7e0758098d2dc59c1db60bece8f7c26b49c5e' 2024-06-14 00:42:04,274 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2024-06-14 00:42:04,275 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:42:04,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:42:04,279 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:42:04,535 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7faa889e32e0> has no local changes 2024-06-14 00:42:04,535 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:42:04,612 [ scc.git] DEBUG [detached HEAD f2cd8f2] merge master -Dorg -Snone 2024-06-14 00:42:04,613 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-14 00:42:04,613 [ scc.merge] INFO Already up to date. 2024-06-14 00:42:04,613 [ scc.merge] INFO 2024-06-14 00:42:04,613 [ scc.merge] INFO Merged PRs: 2024-06-14 00:42:04,613 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-14 00:42:04,613 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-14 00:42:04,613 [ scc.merge] INFO 2024-06-14 00:42:04,613 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-14 00:42:04,613 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2024-06-14 00:42:14,067 [ scc.config] DEBUG Found github.token 2024-06-14 00:42:14,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-06-14 00:42:14,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:42:14,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:42:15,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-06-14 00:42:15,098 [ scc.gh] DEBUG 4511 remaining from 5000 (Reset at 01:06 2024-06-14 00:42:15,099 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:15,104 [ scc.git] DEBUG Check current status 2024-06-14 00:42:15,104 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:15,108 [ scc.git] DEBUG f2cd8f2 merge master -Dorg -Snone 2024-06-14 00:42:15,108 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:15,157 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-14 00:42:15,160 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-14 00:42:15,164 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-14 00:42:15,167 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-14 00:42:15,171 [ scc.git] DEBUG ffc7e0758098d2dc59c1db60bece8f7c26b49c5e omero-figure (v7.0.0-1-gffc7e075) 2024-06-14 00:42:15,173 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-14 00:42:15,176 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-14 00:42:15,179 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-14 00:42:15,182 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-14 00:42:15,186 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-14 00:42:15,190 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-14 00:42:15,194 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-14 00:42:15,199 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-14 00:42:15,203 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-14 00:42:15,207 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-14 00:42:15,212 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-14 00:42:15,215 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-14 00:42:15,218 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-14 00:42:15,222 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-14 00:42:15,225 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-14 00:42:15,229 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-14 00:42:15,234 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-14 00:42:15,240 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:15,240 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-06-14 00:42:15,244 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2024-06-14 00:42:15,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2024-06-14 00:42:16,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:16,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:16,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:17,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:17,305 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:17,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-14 00:42:17,395 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:17,399 [ scc.git] DEBUG Check current status 2024-06-14 00:42:17,400 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:17,403 [ scc.git] DEBUG 4628e82 Merge pull request #65 from jburel/gateway_5_9_1 2024-06-14 00:42:17,404 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:17,450 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:17,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2024-06-14 00:42:18,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:18,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:19,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:19,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:19,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:19,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:19,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-14 00:42:19,556 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:19,562 [ scc.git] DEBUG Check current status 2024-06-14 00:42:19,562 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:19,566 [ scc.git] DEBUG 027b3e6 Merge pull request #24 from sbesson/future_pytest 2024-06-14 00:42:19,566 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:19,608 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:20,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2024-06-14 00:42:20,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:21,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:21,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:21,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:21,854 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:21,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:21,927 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-14 00:42:21,927 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:21,932 [ scc.git] DEBUG Check current status 2024-06-14 00:42:21,932 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:21,937 [ scc.git] DEBUG 53e3f42 Merge pull request #61 from sbesson/pytest 2024-06-14 00:42:21,937 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:21,988 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:22,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2024-06-14 00:42:22,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:23,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:23,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:24,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:24,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:24,108 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:24,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-14 00:42:24,110 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:24,115 [ scc.git] DEBUG Check current status 2024-06-14 00:42:24,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:24,121 [ scc.git] DEBUG 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-14 00:42:24,121 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:24,179 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:24,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2024-06-14 00:42:24,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:25,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:25,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:26,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:26,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:26,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:26,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-14 00:42:26,304 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:26,309 [ scc.git] DEBUG Check current status 2024-06-14 00:42:26,310 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:26,327 [ scc.git] DEBUG ffc7e075 Bump version: 7.0.0 → 7.0.1.dev0 2024-06-14 00:42:26,328 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:26,384 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:26,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2024-06-14 00:42:27,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:27,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:28,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:28,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:28,512 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:28,571 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:28,572 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-14 00:42:28,572 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:28,584 [ scc.git] DEBUG Check current status 2024-06-14 00:42:28,584 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:28,593 [ scc.git] DEBUG e5b3ca3 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-14 00:42:28,593 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:28,659 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:29,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2024-06-14 00:42:29,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:29,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:30,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:30,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:30,709 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:30,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:30,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-14 00:42:30,762 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:30,767 [ scc.git] DEBUG Check current status 2024-06-14 00:42:30,768 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:30,772 [ scc.git] DEBUG 56f4435 Bump version: 3.4.3 → 3.4.4.dev0 2024-06-14 00:42:30,772 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:30,843 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:31,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2024-06-14 00:42:31,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:32,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:32,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:32,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:32,914 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:32,960 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:32,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-14 00:42:32,961 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:32,969 [ scc.git] DEBUG Check current status 2024-06-14 00:42:32,969 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:32,976 [ scc.git] DEBUG 7b7a637 add dev to version 2024-06-14 00:42:32,977 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:33,032 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:33,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2024-06-14 00:42:33,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:34,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:34,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:35,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:35,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:35,304 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:35,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-14 00:42:35,311 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:35,318 [ scc.git] DEBUG Check current status 2024-06-14 00:42:35,318 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:35,328 [ scc.git] DEBUG 9631b15 Merge pull request #82 from JensWendt/master 2024-06-14 00:42:35,328 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:35,397 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:35,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2024-06-14 00:42:36,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:36,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:37,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:37,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:37,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:37,472 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:37,473 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-14 00:42:37,473 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:37,478 [ scc.git] DEBUG Check current status 2024-06-14 00:42:37,478 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:37,483 [ scc.git] DEBUG e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-14 00:42:37,484 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:37,530 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:37,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2024-06-14 00:42:38,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:38,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:39,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:39,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:39,701 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:39,754 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:39,755 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-14 00:42:39,755 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:39,760 [ scc.git] DEBUG Check current status 2024-06-14 00:42:39,761 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:39,767 [ scc.git] DEBUG 5d441c2 Bump version: 0.2.4 → 0.2.5.dev0 2024-06-14 00:42:39,767 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:39,818 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:40,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2024-06-14 00:42:40,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:41,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:41,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:41,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:41,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:41,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:41,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-14 00:42:41,951 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:41,957 [ scc.git] DEBUG Check current status 2024-06-14 00:42:41,957 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:41,961 [ scc.git] DEBUG 18bccb6 Update actions to v3 and v4 2024-06-14 00:42:41,961 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:42,006 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:42,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2024-06-14 00:42:42,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:43,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:43,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:44,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:44,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:44,183 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:44,184 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-14 00:42:44,184 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:44,191 [ scc.git] DEBUG Check current status 2024-06-14 00:42:44,191 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:44,198 [ scc.git] DEBUG 5c752d5 Merge pull request #27 from ome/pre-commit-ci-update-config 2024-06-14 00:42:44,198 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:44,244 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:44,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2024-06-14 00:42:45,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:45,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:45,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:46,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:46,355 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:46,396 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:46,399 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-14 00:42:46,399 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:46,404 [ scc.git] DEBUG Check current status 2024-06-14 00:42:46,404 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:46,409 [ scc.git] DEBUG c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-14 00:42:46,409 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:46,452 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:46,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2024-06-14 00:42:47,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:47,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:48,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:48,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:48,564 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:48,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:48,606 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-14 00:42:48,606 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:48,612 [ scc.git] DEBUG Check current status 2024-06-14 00:42:48,612 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:48,617 [ scc.git] DEBUG cda3ec6 Merge pull request #70 from jburel/toml_support 2024-06-14 00:42:48,617 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:48,664 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:49,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-14 00:42:49,006 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-14 00:42:49,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2024-06-14 00:42:49,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:50,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:50,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:50,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:50,927 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:50,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:50,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-14 00:42:50,967 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:50,973 [ scc.git] DEBUG Check current status 2024-06-14 00:42:50,973 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:50,977 [ scc.git] DEBUG aca9e9c Merge pull request #12 from sbesson/pytest 2024-06-14 00:42:50,978 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:51,018 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:51,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2024-06-14 00:42:51,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:52,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:52,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:53,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:53,120 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:53,160 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:53,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-14 00:42:53,161 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:53,166 [ scc.git] DEBUG Check current status 2024-06-14 00:42:53,166 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:53,170 [ scc.git] DEBUG deab817 update setup-python to v4 2024-06-14 00:42:53,171 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:53,213 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:53,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2024-06-14 00:42:54,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:54,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:54,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:55,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:55,333 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:55,391 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:55,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-14 00:42:55,392 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:55,399 [ scc.git] DEBUG Check current status 2024-06-14 00:42:55,399 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:55,406 [ scc.git] DEBUG 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-14 00:42:55,406 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:55,458 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:55,460 [ scc.git] DEBUG Repository configuration: base-branch: main 2024-06-14 00:42:55,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2024-06-14 00:42:56,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:56,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:57,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:57,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:57,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:57,605 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:57,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-14 00:42:57,607 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:42:57,613 [ scc.git] DEBUG Check current status 2024-06-14 00:42:57,613 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:42:57,619 [ scc.git] DEBUG adfa132 Bump version: 0.4.1 → 0.4.2.dev0 2024-06-14 00:42:57,620 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:42:57,668 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:42:57,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-14 00:42:57,981 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-14 00:42:58,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2024-06-14 00:42:58,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:42:59,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:42:59,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:42:59,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:42:59,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:42:59,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:42:59,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-14 00:42:59,994 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:43:00,001 [ scc.git] DEBUG Check current status 2024-06-14 00:43:00,001 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:43:00,007 [ scc.git] DEBUG 8da48e1 Bump version: 0.4.2 → 0.4.3.dev0 2024-06-14 00:43:00,008 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:43:00,062 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:43:00,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-14 00:43:00,364 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-14 00:43:00,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2024-06-14 00:43:01,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:43:01,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:43:01,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:43:02,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:43:02,335 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:02,378 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:02,380 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-14 00:43:02,380 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:43:02,386 [ scc.git] DEBUG Check current status 2024-06-14 00:43:02,387 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:43:02,392 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-14 00:43:02,393 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:43:02,445 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:43:02,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2024-06-14 00:43:03,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:43:03,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:43:04,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:43:04,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:43:04,572 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:04,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:04,615 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-14 00:43:04,615 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-06-14 00:43:04,621 [ scc.git] DEBUG Check current status 2024-06-14 00:43:04,621 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:43:04,628 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-14 00:43:04,629 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:43:04,683 [ scc.config] DEBUG Found remote.origin.url 2024-06-14 00:43:04,685 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-06-14 00:43:04,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-14 00:43:04,995 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-14 00:43:05,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2024-06-14 00:43:05,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-06-14 00:43:06,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-06-14 00:43:06,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-06-14 00:43:06,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-06-14 00:43:06,911 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:06,961 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:06,961 [ scc.git] DEBUG Resetting... 2024-06-14 00:43:06,961 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-06-14 00:43:06,972 [ scc.git] DEBUG HEAD is now at f2cd8f2 merge master -Dorg -Snone 2024-06-14 00:43:06,972 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-06-14 00:43:07,086 [ scc.git] DEBUG Check current status 2024-06-14 00:43:07,087 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-06-14 00:43:07,093 [ scc.git] DEBUG f2cd8f2 merge master -Dorg -Snone 2024-06-14 00:43:07,094 [ scc.git] DEBUG Calling 'git submodule status' 2024-06-14 00:43:07,152 [ scc.git] DEBUG 4628e82a32d8af458d9fa621303b24a0a860378f minimal-omero-client (remotes/origin/HEAD) 2024-06-14 00:43:07,155 [ scc.git] DEBUG 027b3e695d5b225955918c53ef8c81e0d5bc6bf4 omero-cli-duplicate (v0.4.0-12-g027b3e6) 2024-06-14 00:43:07,159 [ scc.git] DEBUG 53e3f420999e2cc5992711f49baa3779cf2c4d3a omero-cli-render (v0.8.0-9-g53e3f42) 2024-06-14 00:43:07,162 [ scc.git] DEBUG 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 omero-cli-zarr (v0.5.5-5-g2ca566b) 2024-06-14 00:43:07,167 [ scc.git] DEBUG ffc7e0758098d2dc59c1db60bece8f7c26b49c5e omero-figure (v7.0.0-1-gffc7e075) 2024-06-14 00:43:07,171 [ scc.git] DEBUG e5b3ca3a5aba41c950d2427b1a05ee0ced55670e omero-fpbioimage (v0.4.1-1-ge5b3ca3) 2024-06-14 00:43:07,174 [ scc.git] DEBUG 56f443528edd3b7127635933cb573b528b57acda omero-gallery (v3.4.3-1-g56f4435) 2024-06-14 00:43:07,179 [ scc.git] DEBUG 7b7a637c795fea1582f47a6cdec499f77cfcde1e omero-iviewer (v0.14.0-1-g7b7a637) 2024-06-14 00:43:07,183 [ scc.git] DEBUG 9631b155c44fcec9986b03315dd9f5c5c64aa7eb omero-mapr (v0.5.2-7-g9631b15) 2024-06-14 00:43:07,187 [ scc.git] DEBUG e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c omero-metadata (v0.12.0-15-ge2fc5ec) 2024-06-14 00:43:07,191 [ scc.git] DEBUG 5d441c250912a98d8a87771f78dde8b54c8e12d6 omero-parade (v0.2.4-1-g5d441c2) 2024-06-14 00:43:07,196 [ scc.git] DEBUG 18bccb69f16cfeee98628ff2ae14ab829b87a23c omero-prometheus-tools (v0.2.3-4-g18bccb6) 2024-06-14 00:43:07,200 [ scc.git] DEBUG 5c752d5c25fee07c1835036d6a90bd97faeb0720 omero-rois (v0.2.0-63-g5c752d5) 2024-06-14 00:43:07,204 [ scc.git] DEBUG c8610dba25f39870a09fa5401c735fb3be85a319 omero-signup (v0.3.3-1-gc8610db) 2024-06-14 00:43:07,208 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2024-06-14 00:43:07,211 [ scc.git] DEBUG aca9e9cad82a08e2e3d37d71cb374b37c90e4693 omero-upload (v0.4.0-8-gaca9e9c) 2024-06-14 00:43:07,215 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2024-06-14 00:43:07,218 [ scc.git] DEBUG 67bb245b8b08709e04a8bf52b02de2298a029a94 omero-web-zarr (v0.1.1-1-g67bb245) 2024-06-14 00:43:07,222 [ scc.git] DEBUG adfa132f23a1b12ca2d2ec53ebba54c760fe2d07 omero-weberror (v0.4.1-1-gadfa132) 2024-06-14 00:43:07,226 [ scc.git] DEBUG 8da48e116184f1ebb28aa9629748afdfb0282ae5 omero-webtest (v0.4.2-1-g8da48e1) 2024-06-14 00:43:07,230 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2024-06-14 00:43:07,236 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a scripts (v5.8.2-1-g5a90893) 2024-06-14 00:43:07,237 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-06-14 00:43:07,238 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-06-14 00:43:07,238 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-06-14 00:43:07,238 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-06-14 00:43:07,238 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-06-14 00:43:07,238 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-06-14 00:43:07,238 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:07,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2024-06-14 00:43:07,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/375 HTTP/1.1" 200 None 2024-06-14 00:43:07,979 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:43:08,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None 2024-06-14 00:43:08,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:09,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/90e6cc95443ce4747893ad9176814fa340f114e8 HTTP/1.1" 200 None 2024-06-14 00:43:09,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/90e6cc95443ce4747893ad9176814fa340f114e8?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:09,957 [ scc.repo] DEBUG - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-14 00:43:10,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/373 HTTP/1.1" 200 None 2024-06-14 00:43:10,431 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:43:10,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-14 00:43:11,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:11,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/c8279eaae4892995e532fa290a1f76ace85afdbc HTTP/1.1" 200 None 2024-06-14 00:43:12,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/c8279eaae4892995e532fa290a1f76ace85afdbc?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:12,309 [ scc.repo] DEBUG - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-14 00:43:12,309 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:43:12,309 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:12,309 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:12,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:43:12,319 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:43:12,319 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:43:12,325 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:43:12,331 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:12,331 [ scc.git] DEBUG Calling 'git fetch origin pull/373/head' 2024-06-14 00:43:12,727 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-14 00:43:12,727 [ scc.git] DEBUG * branch refs/pull/373/head -> FETCH_HEAD 2024-06-14 00:43:12,733 [ scc.git] DEBUG Calling 'git fetch origin pull/375/head' 2024-06-14 00:43:13,130 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2024-06-14 00:43:13,131 [ scc.git] DEBUG * branch refs/pull/375/head -> FETCH_HEAD 2024-06-14 00:43:13,137 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:43:13,137 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:13,137 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:13,143 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-14 00:43:13,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:13,154 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 373 (Bump omero-test-infra from `7688c54` to `cda3ec6`) c8279eaae4892995e532fa290a1f76ace85afdbc' 2024-06-14 00:43:13,159 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:13,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:13,315 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-14 00:43:13,321 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:13,327 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 375 (Bump omero-figure from `3d9e3b8` to `ffc7e07`) 90e6cc95443ce4747893ad9176814fa340f114e8' 2024-06-14 00:43:13,332 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:13,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:13,729 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:43:13,798 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:13,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:13,806 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:14,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2024-06-14 00:43:14,154 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:43:14,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-14 00:43:14,154 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:14,154 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:14,160 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:43:14,166 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:43:14,166 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:43:14,173 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:43:14,180 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:14,180 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:43:14,180 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:14,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:14,186 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:43:14,230 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:14,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:14,236 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:14,278 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:43:14,285 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9afe9f400> has no local changes 2024-06-14 00:43:14,286 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:43:14,295 [ scc.git] DEBUG [detached HEAD 3517a23] merge master -Dorg -Ssuccess-only 2024-06-14 00:43:14,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:14,296 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:14,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2024-06-14 00:43:15,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25 HTTP/1.1" 200 None 2024-06-14 00:43:15,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/25/comments HTTP/1.1" 200 None 2024-06-14 00:43:16,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-14 00:43:16,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:17,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:43:17,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ba066707734718b3c2f034d21873d2fcecd9cd48 HTTP/1.1" 200 None 2024-06-14 00:43:18,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ba066707734718b3c2f034d21873d2fcecd9cd48?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:18,281 [ scc.repo] DEBUG - PR 25 jburel 'review message' 2024-06-14 00:43:18,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2024-06-14 00:43:19,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2024-06-14 00:43:19,272 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:43:19,272 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-14 00:43:19,272 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:19,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:19,278 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:43:19,283 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:43:19,283 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:43:19,289 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:43:19,296 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:19,296 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2024-06-14 00:43:19,813 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2024-06-14 00:43:19,813 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2024-06-14 00:43:19,820 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:43:19,821 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:19,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:19,827 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-14 00:43:19,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:19,841 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (review message) ba066707734718b3c2f034d21873d2fcecd9cd48' 2024-06-14 00:43:19,862 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:19,865 [ scc.git] DEBUG src/omero/plugins/duplicate.py | 7 +++---- 2024-06-14 00:43:19,865 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 4 deletions(-) 2024-06-14 00:43:20,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:20,029 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:43:20,073 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:20,073 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:20,080 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:20,126 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:43:20,133 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedd2730> has no local changes 2024-06-14 00:43:20,133 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:43:20,142 [ scc.git] DEBUG [detached HEAD c9a3b63] merge master -Dorg -Ssuccess-only 2024-06-14 00:43:20,142 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:20,142 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:20,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2024-06-14 00:43:21,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/65 HTTP/1.1" 200 None 2024-06-14 00:43:21,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/65/comments HTTP/1.1" 200 None 2024-06-14 00:43:22,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705 HTTP/1.1" 200 None 2024-06-14 00:43:22,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:23,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/d2a19861c45a55ebfa0c127d1eaaf818b1527705 HTTP/1.1" 200 None 2024-06-14 00:43:23,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/d2a19861c45a55ebfa0c127d1eaaf818b1527705?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:23,500 [ scc.repo] DEBUG - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password' 2024-06-14 00:43:23,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64 HTTP/1.1" 200 None 2024-06-14 00:43:24,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/64/comments HTTP/1.1" 200 None 2024-06-14 00:43:24,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-14 00:43:25,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:25,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/6dffdfe0e7ed620e791de943fad823e440b40639 HTTP/1.1" 200 None 2024-06-14 00:43:26,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/6dffdfe0e7ed620e791de943fad823e440b40639?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:26,354 [ scc.repo] DEBUG - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-14 00:43:26,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/63 HTTP/1.1" 200 None 2024-06-14 00:43:27,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-14 00:43:27,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:28,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae HTTP/1.1" 200 None 2024-06-14 00:43:28,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:28,738 [ scc.repo] DEBUG - PR 63 sbesson 'Remove python-future dependency' 2024-06-14 00:43:29,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62 HTTP/1.1" 200 None 2024-06-14 00:43:29,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/62/comments HTTP/1.1" 200 None 2024-06-14 00:43:30,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2024-06-14 00:43:30,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2024-06-14 00:43:31,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-14 00:43:31,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:32,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/b8fba620a2b882050c1858f3a7d8bee8c8efdede HTTP/1.1" 200 None 2024-06-14 00:43:32,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/b8fba620a2b882050c1858f3a7d8bee8c8efdede?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:32,552 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2024-06-14 00:43:33,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/54 HTTP/1.1" 200 None 2024-06-14 00:43:33,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2024-06-14 00:43:33,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2024-06-14 00:43:34,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48 HTTP/1.1" 200 None 2024-06-14 00:43:34,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/48/comments HTTP/1.1" 200 None 2024-06-14 00:43:34,922 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:43:34,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-14 00:43:34,922 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:34,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:34,928 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:43:34,934 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:43:34,935 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:43:34,941 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:43:34,947 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:34,947 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2024-06-14 00:43:35,424 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-14 00:43:35,425 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2024-06-14 00:43:35,430 [ scc.git] DEBUG Calling 'git fetch origin pull/63/head' 2024-06-14 00:43:35,902 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-14 00:43:35,903 [ scc.git] DEBUG * branch refs/pull/63/head -> FETCH_HEAD 2024-06-14 00:43:35,909 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-14 00:43:36,300 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-14 00:43:36,301 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-14 00:43:36,306 [ scc.git] DEBUG Calling 'git fetch origin pull/65/head' 2024-06-14 00:43:36,848 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2024-06-14 00:43:36,848 [ scc.git] DEBUG * branch refs/pull/65/head -> FETCH_HEAD 2024-06-14 00:43:36,850 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:43:36,851 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:36,851 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:36,858 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-14 00:43:36,866 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:36,872 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) b8fba620a2b882050c1858f3a7d8bee8c8efdede' 2024-06-14 00:43:36,905 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:36,908 [ scc.git] DEBUG src/omero_cli_render.py | 49 ++++++++++++++++++++++++++++++++----------------- 2024-06-14 00:43:36,908 [ scc.git] DEBUG 1 file changed, 32 insertions(+), 17 deletions(-) 2024-06-14 00:43:37,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:37,067 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-14 00:43:37,074 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:37,081 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 63 (Remove python-future dependency) f093c7c9c7ea4a71c2e5dbe4f6558ee5ea2b30ae' 2024-06-14 00:43:37,171 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-14 00:43:37,171 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:37,179 [ scc.git] DEBUG setup.py | 3 +-- 2024-06-14 00:43:37,179 [ scc.git] DEBUG src/omero_cli_render.py | 9 ++------- 2024-06-14 00:43:37,179 [ scc.git] DEBUG test/integration/clitest/test_render.py | 6 +----- 2024-06-14 00:43:37,179 [ scc.git] DEBUG 3 files changed, 4 insertions(+), 14 deletions(-) 2024-06-14 00:43:37,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:37,491 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-14 00:43:37,503 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:37,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Fix thumbnail generation with missing rendering definition) 6dffdfe0e7ed620e791de943fad823e440b40639' 2024-06-14 00:43:37,567 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-14 00:43:37,567 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_render.py 2024-06-14 00:43:37,567 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:37,571 [ scc.git] DEBUG src/omero_cli_render.py | 14 ++++++++++++-- 2024-06-14 00:43:37,571 [ scc.git] DEBUG test/integration/clitest/test_render.py | 12 ++++++++++++ 2024-06-14 00:43:37,571 [ scc.git] DEBUG 2 files changed, 24 insertions(+), 2 deletions(-) 2024-06-14 00:43:37,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:37,908 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d2a19861c45a55ebfa0c127d1eaaf818b1527705' 2024-06-14 00:43:37,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:37,921 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 65 (gateway_required() uses omero_user_token if no username and password) d2a19861c45a55ebfa0c127d1eaaf818b1527705' 2024-06-14 00:43:37,950 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2024-06-14 00:43:37,951 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:37,956 [ scc.git] DEBUG src/omero_cli_render.py | 20 ++++++++++++++++++++ 2024-06-14 00:43:37,957 [ scc.git] DEBUG 1 file changed, 20 insertions(+) 2024-06-14 00:43:38,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:38,319 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:43:38,367 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:38,368 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:38,378 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:38,434 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:43:38,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9afe9f880> has no local changes 2024-06-14 00:43:38,444 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:43:38,455 [ scc.git] DEBUG [detached HEAD 247e647] merge master -Dorg -Ssuccess-only 2024-06-14 00:43:38,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:38,456 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:38,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2024-06-14 00:43:39,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/161 HTTP/1.1" 200 None 2024-06-14 00:43:39,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147 HTTP/1.1" 200 None 2024-06-14 00:43:40,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/147/comments HTTP/1.1" 200 None 2024-06-14 00:43:40,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-14 00:43:41,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:41,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:43:42,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-14 00:43:42,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/a14f62a940f4974a305b3f5858049ee493b898ef?per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:43,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef HTTP/1.1" 200 None 2024-06-14 00:43:43,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/a14f62a940f4974a305b3f5858049ee493b898ef/status HTTP/1.1" 200 None 2024-06-14 00:43:43,569 [ scc.repo] DEBUG - PR 147 will-moore 'Name option' 2024-06-14 00:43:44,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2024-06-14 00:43:44,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2024-06-14 00:43:45,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2024-06-14 00:43:45,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-14 00:43:46,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:46,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/553b35f498764274f8dc882fb54c7e0a30fb6737 HTTP/1.1" 200 None 2024-06-14 00:43:47,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/553b35f498764274f8dc882fb54c7e0a30fb6737?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:47,009 [ scc.repo] DEBUG - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-14 00:43:47,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/118 HTTP/1.1" 200 None 2024-06-14 00:43:47,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102 HTTP/1.1" 200 None 2024-06-14 00:43:48,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/102/comments HTTP/1.1" 200 None 2024-06-14 00:43:49,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-14 00:43:49,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:49,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f22d4074b7c458ad24320cf5a6f8adb9e686aa44 HTTP/1.1" 200 None 2024-06-14 00:43:50,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f22d4074b7c458ad24320cf5a6f8adb9e686aa44?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:50,384 [ scc.repo] DEBUG - PR 102 will-moore 'Zarr export tests' 2024-06-14 00:43:50,385 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:43:50,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-14 00:43:50,385 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:50,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:50,392 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:43:50,399 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:43:50,399 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:43:50,408 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:43:50,416 [ scc.git] DEBUG Already up to date. 2024-06-14 00:43:50,417 [ scc.git] DEBUG Calling 'git fetch origin pull/102/head' 2024-06-14 00:43:50,811 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-14 00:43:50,812 [ scc.git] DEBUG * branch refs/pull/102/head -> FETCH_HEAD 2024-06-14 00:43:50,820 [ scc.git] DEBUG Calling 'git fetch origin pull/123/head' 2024-06-14 00:43:51,262 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-14 00:43:51,262 [ scc.git] DEBUG * branch refs/pull/123/head -> FETCH_HEAD 2024-06-14 00:43:51,267 [ scc.git] DEBUG Calling 'git fetch origin pull/147/head' 2024-06-14 00:43:51,716 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2024-06-14 00:43:51,716 [ scc.git] DEBUG * branch refs/pull/147/head -> FETCH_HEAD 2024-06-14 00:43:51,722 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:43:51,722 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:51,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:51,728 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-14 00:43:51,737 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:51,744 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 102 (Zarr export tests) f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-14 00:43:51,760 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-14 00:43:51,760 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-14 00:43:51,760 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-14 00:43:51,760 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:43:51,761 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:43:51,768 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-14 00:43:51,774 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-14 00:43:51,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:51,934 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 f22d4074b7c458ad24320cf5a6f8adb9e686aa44' 2024-06-14 00:43:51,944 [ scc.git] DEBUG Calling 'git diff --name-only 782a1cd0077bcc2871f21e9f0acdc25ae7745243..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-14 00:43:51,953 [ scc.git] INFO - PR 102 will-moore 'Zarr export tests' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py --conflicts 2024-06-14 00:43:51,959 [ scc.config] DEBUG Found github.token 2024-06-14 00:43:51,960 [ scc.git] DEBUG Not adding comment to issue #102, already --conflicts. 2024-06-14 00:43:51,960 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-14 00:43:51,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:51,976 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 123 (Support export of Fileset:ID) 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-14 00:43:51,993 [ scc.git] DEBUG Auto-merging .isort.cfg 2024-06-14 00:43:51,993 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .isort.cfg 2024-06-14 00:43:51,993 [ scc.git] DEBUG Auto-merging setup.py 2024-06-14 00:43:51,993 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2024-06-14 00:43:51,993 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-14 00:43:51,993 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2024-06-14 00:43:51,993 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2024-06-14 00:43:51,993 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:43:51,994 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:43:52,003 [ scc.git] DEBUG Calling 'git reset --hard 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-14 00:43:52,013 [ scc.git] DEBUG HEAD is now at 2ca566b Merge pull request #160 from ome/pre-commit-ci-update-config 2024-06-14 00:43:52,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:52,346 [ scc.git] DEBUG Calling 'git merge-base 2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473 553b35f498764274f8dc882fb54c7e0a30fb6737' 2024-06-14 00:43:52,356 [ scc.git] DEBUG Calling 'git diff --name-only eff38d0408f9d50de13b28dfe09e4382965e203f..2ca566b8cd1b2f3787ce5c8017ef8d4d4ac39473' 2024-06-14 00:43:52,364 [ scc.git] INFO - PR 123 will-moore 'Support export of Fileset:ID' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - PR #102 will-moore 'Zarr export tests' - src/omero_zarr/raw_pixels.py - Upstream changes - .isort.cfg - src/omero_zarr/raw_pixels.py --conflicts 2024-06-14 00:43:52,371 [ scc.config] DEBUG Found github.token 2024-06-14 00:43:52,372 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts. 2024-06-14 00:43:52,372 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-14 00:43:52,379 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:52,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef' 2024-06-14 00:43:52,404 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2024-06-14 00:43:52,404 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2024-06-14 00:43:52,406 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:43:52,409 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------ 2024-06-14 00:43:52,410 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++ 2024-06-14 00:43:52,410 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++-- 2024-06-14 00:43:52,410 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++----- 2024-06-14 00:43:52,410 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +- 2024-06-14 00:43:52,410 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-) 2024-06-14 00:43:52,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:43:52,753 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:43:52,818 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:43:52,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:43:52,827 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:43:52,888 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:43:52,899 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedd2970> has no local changes 2024-06-14 00:43:52,899 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:43:53,807 [ scc.git] DEBUG [detached HEAD cf1b52e] merge master -Dorg -Ssuccess-only 2024-06-14 00:43:53,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:43:53,808 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:43:54,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2024-06-14 00:43:54,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None 2024-06-14 00:43:54,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None 2024-06-14 00:43:55,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-14 00:43:55,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:56,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:43:57,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None 2024-06-14 00:43:57,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:43:57,597 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor' 2024-06-14 00:43:58,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None 2024-06-14 00:43:58,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-14 00:43:59,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:43:59,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:00,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None 2024-06-14 00:44:00,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:00,680 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature' 2024-06-14 00:44:00,681 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:00,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-14 00:44:00,681 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:00,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:00,687 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:00,692 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:00,693 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:00,698 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:00,704 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:00,705 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head' 2024-06-14 00:44:01,650 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-14 00:44:01,650 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD 2024-06-14 00:44:01,656 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head' 2024-06-14 00:44:02,273 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2024-06-14 00:44:02,274 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD 2024-06-14 00:44:02,279 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:02,279 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:02,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:02,285 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-14 00:44:02,293 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:02,299 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24' 2024-06-14 00:44:02,437 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:02,445 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++- 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++ 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++ 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++- 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 + 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++- 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++- 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++ 2024-06-14 00:44:02,446 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++ 2024-06-14 00:44:02,446 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-) 2024-06-14 00:44:02,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:02,602 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-14 00:44:02,612 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:02,620 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab' 2024-06-14 00:44:02,732 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js 2024-06-14 00:44:02,732 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js 2024-06-14 00:44:02,732 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js 2024-06-14 00:44:02,733 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:02,740 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +- 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/css/figure.css | 4 + 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +- 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 + 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++- 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +- 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 + 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +- 2024-06-14 00:44:02,740 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 + 2024-06-14 00:44:02,740 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-) 2024-06-14 00:44:02,740 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png 2024-06-14 00:44:03,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:03,019 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:03,058 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:03,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:03,064 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:03,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:03,130 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aed8dbb0> has no local changes 2024-06-14 00:44:03,131 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:03,143 [ scc.git] DEBUG [detached HEAD 974308bb] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:03,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:03,144 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:03,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2024-06-14 00:44:04,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2024-06-14 00:44:04,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2024-06-14 00:44:05,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-14 00:44:05,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:05,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None 2024-06-14 00:44:06,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:06,340 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2024-06-14 00:44:06,340 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:06,340 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-14 00:44:06,340 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:06,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:06,347 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:06,353 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:06,353 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:06,361 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:06,371 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:06,371 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2024-06-14 00:44:06,799 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2024-06-14 00:44:06,800 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2024-06-14 00:44:06,805 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:06,805 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:06,805 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:06,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-14 00:44:06,816 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:06,820 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2024-06-14 00:44:06,854 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2024-06-14 00:44:06,855 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:06,857 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2024-06-14 00:44:06,857 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-06-14 00:44:07,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:07,025 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:07,063 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:07,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:07,069 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:07,106 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:07,113 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedfadf0> has no local changes 2024-06-14 00:44:07,113 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:07,121 [ scc.git] DEBUG [detached HEAD a81a6b8] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:07,121 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:07,121 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:07,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2024-06-14 00:44:07,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None 2024-06-14 00:44:07,961 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:44:08,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-14 00:44:09,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:09,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:10,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None 2024-06-14 00:44:10,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:10,497 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-14 00:44:10,498 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:10,498 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-14 00:44:10,499 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:10,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:10,529 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:10,560 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:10,561 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:10,579 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:10,595 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:10,595 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head' 2024-06-14 00:44:10,987 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2024-06-14 00:44:10,987 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD 2024-06-14 00:44:10,992 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:10,992 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:10,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:10,998 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-14 00:44:11,004 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:11,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893' 2024-06-14 00:44:11,020 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:11,024 [ scc.git] DEBUG package-lock.json | 18 ++++++------------ 2024-06-14 00:44:11,024 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-) 2024-06-14 00:44:11,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:11,178 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:11,222 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:11,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:11,228 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:11,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:11,282 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedfa340> has no local changes 2024-06-14 00:44:11,282 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:11,293 [ scc.git] DEBUG [detached HEAD d288a36] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:11,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:11,294 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:11,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2024-06-14 00:44:12,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2024-06-14 00:44:12,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2024-06-14 00:44:13,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-14 00:44:13,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:14,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:14,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None 2024-06-14 00:44:15,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:15,037 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-14 00:44:15,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None 2024-06-14 00:44:15,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None 2024-06-14 00:44:16,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-14 00:44:16,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:17,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:17,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None 2024-06-14 00:44:18,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:18,403 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure' 2024-06-14 00:44:18,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2024-06-14 00:44:19,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2024-06-14 00:44:19,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-14 00:44:20,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:20,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None 2024-06-14 00:44:21,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:21,168 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2024-06-14 00:44:21,169 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:21,169 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-14 00:44:21,169 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:21,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:21,175 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:21,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:21,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:21,186 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:21,192 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:21,193 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2024-06-14 00:44:21,735 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-14 00:44:21,735 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2024-06-14 00:44:21,742 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head' 2024-06-14 00:44:22,311 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-14 00:44:22,311 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD 2024-06-14 00:44:22,318 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2024-06-14 00:44:22,762 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2024-06-14 00:44:22,762 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2024-06-14 00:44:22,767 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:22,768 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:22,768 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:22,774 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-14 00:44:22,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:22,785 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2024-06-14 00:44:22,838 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2024-06-14 00:44:22,839 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:22,842 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2024-06-14 00:44:22,842 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2024-06-14 00:44:22,843 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2024-06-14 00:44:23,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:23,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-14 00:44:23,019 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:23,025 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd' 2024-06-14 00:44:23,167 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2024-06-14 00:44:23,167 [ scc.git] DEBUG Auto-merging src/app/context.js 2024-06-14 00:44:23,167 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2024-06-14 00:44:23,167 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js 2024-06-14 00:44:23,168 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:23,172 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++- 2024-06-14 00:44:23,172 [ scc.git] DEBUG src/app/context.js | 6 +- 2024-06-14 00:44:23,172 [ scc.git] DEBUG src/app/header.html | 5 + 2024-06-14 00:44:23,172 [ scc.git] DEBUG src/app/header.js | 45 ++++++++- 2024-06-14 00:44:23,172 [ scc.git] DEBUG src/utils/constants.js | 6 ++ 2024-06-14 00:44:23,172 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++ 2024-06-14 00:44:23,172 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-) 2024-06-14 00:44:23,172 [ scc.git] DEBUG create mode 100644 src/utils/figure.js 2024-06-14 00:44:23,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:23,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-14 00:44:23,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:23,425 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2024-06-14 00:44:23,470 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2024-06-14 00:44:23,471 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:23,474 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2024-06-14 00:44:23,474 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2024-06-14 00:44:23,474 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2024-06-14 00:44:23,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:23,830 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:23,870 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:23,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:23,876 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:23,920 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:23,928 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedb98e0> has no local changes 2024-06-14 00:44:23,928 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:23,939 [ scc.git] DEBUG [detached HEAD 16b5db1] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:23,939 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:23,939 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:24,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2024-06-14 00:44:24,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2024-06-14 00:44:25,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2024-06-14 00:44:25,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-14 00:44:26,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:26,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:27,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None 2024-06-14 00:44:27,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:27,685 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2024-06-14 00:44:27,685 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:27,686 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-14 00:44:27,686 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:27,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:27,693 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:27,699 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:27,699 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:27,706 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:27,713 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:27,714 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2024-06-14 00:44:28,092 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2024-06-14 00:44:28,092 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2024-06-14 00:44:28,100 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:28,101 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:28,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:28,108 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-14 00:44:28,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:28,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2024-06-14 00:44:28,138 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:28,141 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2024-06-14 00:44:28,141 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2024-06-14 00:44:28,141 [ scc.git] DEBUG requirements.txt | 2 +- 2024-06-14 00:44:28,141 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2024-06-14 00:44:28,141 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2024-06-14 00:44:28,141 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2024-06-14 00:44:28,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:28,318 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:28,361 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:28,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:28,366 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:28,407 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:28,414 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac555bb0> has no local changes 2024-06-14 00:44:28,414 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:28,423 [ scc.git] DEBUG [detached HEAD 8617ab3] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:28,424 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:28,424 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:28,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2024-06-14 00:44:29,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2024-06-14 00:44:29,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2024-06-14 00:44:30,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-14 00:44:30,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:31,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None 2024-06-14 00:44:31,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:31,842 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-14 00:44:32,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2024-06-14 00:44:32,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2024-06-14 00:44:33,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-14 00:44:33,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:34,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None 2024-06-14 00:44:34,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:34,685 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-14 00:44:34,685 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:34,685 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-14 00:44:34,686 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:34,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:34,692 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:34,697 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:34,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:34,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:34,709 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:34,710 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2024-06-14 00:44:35,225 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-14 00:44:35,225 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2024-06-14 00:44:35,230 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2024-06-14 00:44:35,772 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2024-06-14 00:44:35,773 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2024-06-14 00:44:35,777 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:35,777 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:35,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:35,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-14 00:44:35,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:35,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-14 00:44:35,842 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2024-06-14 00:44:35,843 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2024-06-14 00:44:35,843 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-14 00:44:35,843 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-14 00:44:35,843 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:44:35,843 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:44:35,850 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-14 00:44:35,857 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-14 00:44:36,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:36,017 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2024-06-14 00:44:36,025 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-14 00:44:36,031 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2024-06-14 00:44:36,036 [ scc.config] DEBUG Found github.token 2024-06-14 00:44:36,037 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2024-06-14 00:44:36,037 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-14 00:44:36,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:36,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-14 00:44:36,080 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2024-06-14 00:44:36,080 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2024-06-14 00:44:36,080 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2024-06-14 00:44:36,081 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:44:36,081 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:44:36,088 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-14 00:44:36,096 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging 2024-06-14 00:44:36,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:36,431 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7' 2024-06-14 00:44:36,439 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c' 2024-06-14 00:44:36,444 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2024-06-14 00:44:36,448 [ scc.config] DEBUG Found github.token 2024-06-14 00:44:36,449 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2024-06-14 00:44:36,449 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:36,489 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:36,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:36,495 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:36,538 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:36,547 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aedaff40> has no local changes 2024-06-14 00:44:36,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:36,560 [ scc.git] DEBUG [detached HEAD ca4ce03] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:36,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:36,561 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:36,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2024-06-14 00:44:37,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None 2024-06-14 00:44:37,481 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:44:38,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-14 00:44:38,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:38,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:39,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None 2024-06-14 00:44:39,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:39,991 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-14 00:44:40,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None 2024-06-14 00:44:40,448 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:44:40,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-14 00:44:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:41,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:42,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None 2024-06-14 00:44:42,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:42,920 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-14 00:44:43,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None 2024-06-14 00:44:43,385 [ scc.repo] DEBUG # ... Include label: dependencies 2024-06-14 00:44:43,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-14 00:44:44,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:44,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:44:45,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None 2024-06-14 00:44:45,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:45,903 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-14 00:44:46,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2024-06-14 00:44:46,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2024-06-14 00:44:47,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2024-06-14 00:44:47,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2024-06-14 00:44:48,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2024-06-14 00:44:48,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2024-06-14 00:44:48,882 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:48,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-14 00:44:48,882 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:48,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:48,890 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:48,895 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:48,895 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:48,901 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:48,908 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:48,909 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head' 2024-06-14 00:44:49,294 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-14 00:44:49,294 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD 2024-06-14 00:44:49,299 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head' 2024-06-14 00:44:49,711 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-14 00:44:49,711 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD 2024-06-14 00:44:49,717 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head' 2024-06-14 00:44:50,110 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2024-06-14 00:44:50,111 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD 2024-06-14 00:44:50,117 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:50,118 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:50,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:50,125 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-14 00:44:50,130 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:50,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680' 2024-06-14 00:44:50,147 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:50,151 [ scc.git] DEBUG package-lock.json | 12 ++++++++---- 2024-06-14 00:44:50,151 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-) 2024-06-14 00:44:50,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:50,360 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-14 00:44:50,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:50,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec' 2024-06-14 00:44:50,424 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-14 00:44:50,425 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:50,428 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++--------------------------- 2024-06-14 00:44:50,428 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-) 2024-06-14 00:44:50,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:50,790 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-14 00:44:50,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:50,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f' 2024-06-14 00:44:50,826 [ scc.git] DEBUG Auto-merging package-lock.json 2024-06-14 00:44:50,827 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:50,830 [ scc.git] DEBUG package-lock.json | 8 ++++---- 2024-06-14 00:44:50,830 [ scc.git] DEBUG package.json | 2 +- 2024-06-14 00:44:50,830 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-) 2024-06-14 00:44:51,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:51,296 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:51,338 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:51,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:51,344 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:51,383 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:51,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac50c640> has no local changes 2024-06-14 00:44:51,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:51,399 [ scc.git] DEBUG [detached HEAD 41256c6] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:51,400 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:51,400 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:51,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2024-06-14 00:44:52,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None 2024-06-14 00:44:52,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-14 00:44:53,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:53,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None 2024-06-14 00:44:54,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:54,320 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel' 2024-06-14 00:44:54,320 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:54,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-14 00:44:54,320 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:54,320 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:54,333 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:54,343 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:54,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:54,353 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:54,362 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:54,362 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-14 00:44:54,750 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2024-06-14 00:44:54,750 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-14 00:44:54,755 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:54,756 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:54,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:54,762 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-14 00:44:54,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:54,773 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e' 2024-06-14 00:44:54,783 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:54,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:54,953 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:54,993 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:54,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:54,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:44:55,040 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:44:55,047 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9aed99be0> has no local changes 2024-06-14 00:44:55,047 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:44:55,056 [ scc.git] DEBUG [detached HEAD c7fea78] merge master -Dorg -Ssuccess-only 2024-06-14 00:44:55,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:44:55,057 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:44:55,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2024-06-14 00:44:56,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None 2024-06-14 00:44:56,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None 2024-06-14 00:44:57,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None 2024-06-14 00:44:57,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-14 00:44:58,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:44:58,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None 2024-06-14 00:44:59,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:44:59,052 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-14 00:44:59,053 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:44:59,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-14 00:44:59,053 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:59,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:59,065 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:44:59,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:44:59,073 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:44:59,081 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:44:59,089 [ scc.git] DEBUG Already up to date. 2024-06-14 00:44:59,089 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head' 2024-06-14 00:44:59,755 [ scc.git] DEBUG From https://github.com/ome/omero-rois 2024-06-14 00:44:59,755 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD 2024-06-14 00:44:59,761 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:44:59,761 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:59,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:59,768 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-14 00:44:59,774 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:44:59,780 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61' 2024-06-14 00:44:59,790 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py 2024-06-14 00:44:59,791 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:44:59,793 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++ 2024-06-14 00:44:59,794 [ scc.git] DEBUG 1 file changed, 33 insertions(+) 2024-06-14 00:44:59,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:44:59,959 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:44:59,999 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:44:59,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:00,006 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:00,045 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:00,052 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac4c6550> has no local changes 2024-06-14 00:45:00,052 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:00,061 [ scc.git] DEBUG [detached HEAD 07a0e18] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:00,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:00,062 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:00,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2024-06-14 00:45:00,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2024-06-14 00:45:01,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2024-06-14 00:45:01,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-14 00:45:02,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:45:02,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None 2024-06-14 00:45:03,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:45:03,393 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-14 00:45:03,394 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:03,394 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-14 00:45:03,394 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:03,395 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:03,414 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:03,434 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:03,434 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:03,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:03,462 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:03,462 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2024-06-14 00:45:03,957 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2024-06-14 00:45:03,958 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2024-06-14 00:45:03,969 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:03,969 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:03,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:03,982 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-14 00:45:03,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:04,009 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-14 00:45:04,114 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG Auto-merging setup.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2024-06-14 00:45:04,114 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:45:04,114 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:45:04,124 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-14 00:45:04,141 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0 2024-06-14 00:45:04,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:04,298 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2024-06-14 00:45:04,308 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319' 2024-06-14 00:45:04,317 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2024-06-14 00:45:04,325 [ scc.config] DEBUG Found github.token 2024-06-14 00:45:04,326 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2024-06-14 00:45:04,326 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:04,392 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:04,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:04,404 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:04,462 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:04,474 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac54bdf0> has no local changes 2024-06-14 00:45:04,475 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:04,486 [ scc.git] DEBUG [detached HEAD fa9ca9e] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:04,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:04,487 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:04,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2024-06-14 00:45:05,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None 2024-06-14 00:45:05,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None 2024-06-14 00:45:06,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-14 00:45:06,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:45:07,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None 2024-06-14 00:45:07,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:45:07,709 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-14 00:45:07,709 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:07,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-14 00:45:07,709 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:07,709 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:07,719 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:07,727 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:07,727 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:07,735 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:07,745 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:07,745 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head' 2024-06-14 00:45:08,282 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2024-06-14 00:45:08,283 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD 2024-06-14 00:45:08,289 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:08,289 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:08,289 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:08,306 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928' 2024-06-14 00:45:08,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:08,356 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928' 2024-06-14 00:45:08,395 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/70-reset-password.sh | 1 + 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 + 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 + 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/omero/Dockerfile | 3 + 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++ 2024-06-14 00:45:08,399 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++ 2024-06-14 00:45:08,400 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++ 2024-06-14 00:45:08,400 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++ 2024-06-14 00:45:08,400 [ scc.git] DEBUG 22 files changed, 824 insertions(+) 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr-compose.yml 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml 2024-06-14 00:45:08,400 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile 2024-06-14 00:45:08,403 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile 2024-06-14 00:45:08,403 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml 2024-06-14 00:45:08,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:08,565 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:08,610 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:08,610 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:08,618 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:08,659 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:08,667 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac4c6730> has no local changes 2024-06-14 00:45:08,667 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:08,679 [ scc.git] DEBUG [detached HEAD 0ed5229] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:08,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:08,680 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:09,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2 2024-06-14 00:45:09,002 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:09,002 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-14 00:45:09,002 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,010 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:09,015 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:09,015 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:09,021 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:09,027 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:09,028 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:09,028 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,028 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,033 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:09,077 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,083 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:09,124 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:09,131 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac4d8b80> has no local changes 2024-06-14 00:45:09,131 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:09,139 [ scc.git] DEBUG [detached HEAD 6b76bcb] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:09,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:09,140 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:09,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2 2024-06-14 00:45:09,434 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:09,434 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-14 00:45:09,434 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,434 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,441 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:09,446 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:09,447 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:09,453 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:09,458 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:09,459 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:09,459 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,459 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,463 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:09,531 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:09,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:09,549 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:09,628 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:09,638 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac4f7d90> has no local changes 2024-06-14 00:45:09,639 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Already up to date. Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:09,655 [ scc.git] DEBUG [detached HEAD a1336fa] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:09,656 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:09,656 [ scc.git] INFO Overriding base-branch from master to main 2024-06-14 00:45:09,656 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:09,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2024-06-14 00:45:10,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2024-06-14 00:45:10,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2024-06-14 00:45:11,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2024-06-14 00:45:11,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-14 00:45:12,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:45:12,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-06-14 00:45:13,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None 2024-06-14 00:45:13,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:45:13,731 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-14 00:45:13,731 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:13,732 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-14 00:45:13,732 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:13,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:13,741 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2024-06-14 00:45:13,748 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:13,748 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2024-06-14 00:45:13,758 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2024-06-14 00:45:13,769 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:13,769 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2024-06-14 00:45:14,226 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2024-06-14 00:45:14,226 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2024-06-14 00:45:14,233 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:14,233 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:14,234 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:14,245 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-14 00:45:14,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:14,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-14 00:45:14,292 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2024-06-14 00:45:14,292 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2024-06-14 00:45:14,292 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:45:14,293 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:45:14,303 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-14 00:45:14,312 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0 2024-06-14 00:45:14,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:14,482 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2024-06-14 00:45:14,497 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94' 2024-06-14 00:45:14,511 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2024-06-14 00:45:14,524 [ scc.config] DEBUG Found github.token 2024-06-14 00:45:14,524 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2024-06-14 00:45:14,525 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:14,600 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:14,601 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:14,608 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:14,653 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:14,664 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac52ab50> has no local changes 2024-06-14 00:45:14,664 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:14,677 [ scc.git] DEBUG [detached HEAD ef8b260] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:14,678 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:14,678 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:14,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2 2024-06-14 00:45:14,912 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:14,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-14 00:45:14,912 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:14,913 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:14,921 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:14,928 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:14,929 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:14,938 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:14,948 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:14,948 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:14,948 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:14,948 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:14,955 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:15,007 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:15,008 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:15,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:15,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:15,128 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac4f5e80> has no local changes 2024-06-14 00:45:15,128 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:15,140 [ scc.git] DEBUG [detached HEAD 3336bbc] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:15,141 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:15,141 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:15,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2 2024-06-14 00:45:15,333 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:15,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-14 00:45:15,333 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:15,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:15,340 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:15,346 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:15,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:15,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:15,360 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:15,360 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:15,360 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:15,360 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:15,366 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:15,412 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:15,412 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:15,418 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:15,462 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:15,469 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac441400> has no local changes 2024-06-14 00:45:15,470 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:15,480 [ scc.git] DEBUG [detached HEAD a5d7be4] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:15,480 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:15,481 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:15,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None 2024-06-14 00:45:16,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None 2024-06-14 00:45:16,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None 2024-06-14 00:45:17,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-14 00:45:17,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:45:18,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None 2024-06-14 00:45:18,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:45:18,683 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly' 2024-06-14 00:45:18,683 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:18,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-14 00:45:18,683 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:18,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:18,691 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-06-14 00:45:18,698 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:18,698 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-06-14 00:45:18,705 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-06-14 00:45:18,712 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:18,712 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head' 2024-06-14 00:45:19,179 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway 2024-06-14 00:45:19,179 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD 2024-06-14 00:45:19,184 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:19,184 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:19,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:19,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-14 00:45:19,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:19,202 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-14 00:45:19,236 [ scc.git] DEBUG Auto-merging Dockerfile 2024-06-14 00:45:19,236 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile 2024-06-14 00:45:19,237 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:45:19,237 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:45:19,244 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-14 00:45:19,251 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2024-06-14 00:45:19,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:19,400 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7' 2024-06-14 00:45:19,407 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9' 2024-06-14 00:45:19,413 [ scc.git] INFO - PR 100 dominikl 'Run tests properly' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - Dockerfile --conflicts 2024-06-14 00:45:19,419 [ scc.config] DEBUG Found github.token 2024-06-14 00:45:19,419 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts. 2024-06-14 00:45:19,419 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:19,463 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:19,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:19,469 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:19,517 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:19,525 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac486b80> has no local changes 2024-06-14 00:45:19,525 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:19,535 [ scc.git] DEBUG [detached HEAD 6d8e792] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:19,536 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:19,536 [ scc.git] INFO Overriding base-branch from master to develop 2024-06-14 00:45:19,536 [ scc.repo] DEBUG ## PRs found: 2024-06-14 00:45:19,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-06-14 00:45:20,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-06-14 00:45:20,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-06-14 00:45:21,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-06-14 00:45:21,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-06-14 00:45:22,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-06-14 00:45:22,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-06-14 00:45:23,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-14 00:45:23,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-06-14 00:45:24,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-06-14 00:45:24,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-06-14 00:45:24,626 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-14 00:45:25,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-06-14 00:45:25,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-06-14 00:45:26,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-06-14 00:45:26,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-06-14 00:45:26,538 [ scc.repo] DEBUG ## Branches found: 2024-06-14 00:45:26,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-14 00:45:26,538 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:26,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:26,544 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-06-14 00:45:26,549 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-06-14 00:45:26,549 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-06-14 00:45:26,555 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-06-14 00:45:26,561 [ scc.git] DEBUG Already up to date. 2024-06-14 00:45:26,562 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-06-14 00:45:27,009 [ scc.git] DEBUG From https://github.com/ome/scripts 2024-06-14 00:45:27,009 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-06-14 00:45:27,015 [ scc.git] DEBUG ## Unique users: [] 2024-06-14 00:45:27,015 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:27,015 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:27,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-14 00:45:27,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:27,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-14 00:45:27,106 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-06-14 00:45:27,106 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-06-14 00:45:27,106 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-06-14 00:45:27,107 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-06-14 00:45:27,114 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-14 00:45:27,120 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0 2024-06-14 00:45:27,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:27,283 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-06-14 00:45:27,290 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a' 2024-06-14 00:45:27,297 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-plugins-push#95](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-06-14 00:45:27,305 [ scc.config] DEBUG Found github.token 2024-06-14 00:45:27,305 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-06-14 00:45:27,305 [ scc.git] DEBUG Calling 'git submodule update' 2024-06-14 00:45:27,354 [ scc.git] DEBUG Get sha1 of %s 2024-06-14 00:45:27,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-06-14 00:45:27,359 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:27,399 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:27,405 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9ac49bd60> has no local changes 2024-06-14 00:45:27,405 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:27,414 [ scc.git] DEBUG [detached HEAD fbf9125] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:27,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:27,415 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-06-14 00:45:27,498 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2024-06-14 00:45:27,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:27,709 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2024-06-14 00:45:27,714 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2024-06-14 00:45:28,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:28,121 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2024-06-14 00:45:28,127 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2024-06-14 00:45:28,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:28,531 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2024-06-14 00:45:28,536 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2024-06-14 00:45:28,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:28,981 [ scc.config] DEBUG Found submodule.omero-figure.url 2024-06-14 00:45:29,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:29,436 [ scc.config] DEBUG Found submodule.omero-figure.branch 2024-06-14 00:45:29,442 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2024-06-14 00:45:29,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:29,850 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2024-06-14 00:45:29,854 [ scc.config] DEBUG Found submodule.omero-gallery.url 2024-06-14 00:45:30,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:30,253 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2024-06-14 00:45:30,260 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2024-06-14 00:45:30,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:30,656 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2024-06-14 00:45:30,660 [ scc.config] DEBUG Found submodule.omero-mapr.url 2024-06-14 00:45:31,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:31,060 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2024-06-14 00:45:31,065 [ scc.config] DEBUG Found submodule.omero-metadata.url 2024-06-14 00:45:31,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:31,529 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2024-06-14 00:45:31,536 [ scc.config] DEBUG Found submodule.omero-parade.url 2024-06-14 00:45:31,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:31,941 [ scc.config] DEBUG Found submodule.omero-parade.branch 2024-06-14 00:45:31,947 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2024-06-14 00:45:32,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:32,353 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2024-06-14 00:45:32,359 [ scc.config] DEBUG Found submodule.omero-rois.url 2024-06-14 00:45:32,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:32,773 [ scc.config] DEBUG Found submodule.omero-signup.url 2024-06-14 00:45:33,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:33,177 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2024-06-14 00:45:33,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:33,603 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2024-06-14 00:45:33,609 [ scc.config] DEBUG Found submodule.omero-upload.url 2024-06-14 00:45:33,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:34,004 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2024-06-14 00:45:34,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:34,406 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2024-06-14 00:45:34,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:34,827 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2024-06-14 00:45:34,834 [ scc.config] DEBUG Found submodule.omero-weberror.url 2024-06-14 00:45:35,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:35,247 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2024-06-14 00:45:35,251 [ scc.config] DEBUG Found submodule.omero-webtest.url 2024-06-14 00:45:35,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:35,662 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2024-06-14 00:45:35,668 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2024-06-14 00:45:36,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:36,080 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2024-06-14 00:45:36,087 [ scc.config] DEBUG Found submodule.scripts.url 2024-06-14 00:45:36,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-06-14 00:45:36,491 [ scc.config] DEBUG Found submodule.scripts.branch 2024-06-14 00:45:36,491 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-06-14 00:45:36,579 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fd9afee32e0> has local changes 2024-06-14 00:45:36,579 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 25 jburel 'review message' Repository: ome/omero-cli-render Excluded PRs: - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) - PR 54 dominikl 'Change rendering settings spec' (stage: draft) - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) Already up to date. Merged PRs: - PR 59 will-moore 'Apply settings to Plate' - PR 63 sbesson 'Remove python-future dependency' - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password' Repository: ome/omero-cli-zarr Excluded PRs: - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) Already up to date. Merged PRs: - PR 147 will-moore 'Name option' Conflicting PRs (not included): - PR 102 will-moore 'Zarr export tests' - PR 123 will-moore 'Support export of Fileset:ID' Repository: ome/omero-figure Excluded PRs: - PR 560 will-moore 'Max projection bytes' (exclude comment) - PR 543 will-moore 'Plate well labels' (exclude comment) Already up to date. Merged PRs: - PR 549 will-moore 'Inset feature' - PR 555 will-moore 'Points in shape editor' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' Repository: ome/omero-iviewer Excluded PRs: - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Already up to date. Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 465 will-moore 'Save as Figure' - PR 471 will-moore 'Z projection disabled tooltip' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' Repository: ome/omero-metadata Already up to date. Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 14 jburel 'use conda-forge channel' Repository: ome/omero-rois Excluded PRs: - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Already up to date. Merged PRs: - PR 6 dominikl 'Add method to create masks grouped by label id' Repository: ome/omero-signup Already up to date. Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Already up to date. Merged PRs: - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' Repository: ome/omero-upload Already up to date. Repository: ome/omero-virtual-microscope Already up to date. Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Already up to date. Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Repository: openmicroscopy/omero-webtest Already up to date. Repository: ome/rOMERO-gateway Already up to date. Conflicting PRs (not included): - PR 100 dominikl 'Run tests properly' Repository: ome/scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-plugins-push#95 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/95/)' 2024-06-14 00:45:36,595 [ scc.git] DEBUG [detached HEAD a6ace35] merge master -Dorg -Ssuccess-only 2024-06-14 00:45:36,595 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2024-06-14 00:45:36,595 [ scc.merge] INFO Repository: ome/omero-plugins 2024-06-14 00:45:36,595 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,595 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,596 [ scc.merge] INFO - PR 373 dependabot[bot] 'Bump omero-test-infra from `7688c54` to `cda3ec6`' 2024-06-14 00:45:36,596 [ scc.merge] INFO - PR 375 dependabot[bot] 'Bump omero-figure from `3d9e3b8` to `ffc7e07`' 2024-06-14 00:45:36,596 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO Repository: ome/minimal-omero-client 2024-06-14 00:45:36,596 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,596 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2024-06-14 00:45:36,596 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,596 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2024-06-14 00:45:36,596 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,596 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,596 [ scc.merge] INFO - PR 25 jburel 'review message' 2024-06-14 00:45:36,596 [ scc.merge] INFO 2024-06-14 00:45:36,596 [ scc.merge] INFO Repository: ome/omero-cli-render 2024-06-14 00:45:36,596 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,596 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft) 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft) 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft) 2024-06-14 00:45:36,597 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,597 [ scc.merge] INFO 2024-06-14 00:45:36,597 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 63 sbesson 'Remove python-future dependency' 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 64 sbesson 'Fix thumbnail generation with missing rendering definition' 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 65 will-moore 'gateway_required() uses omero_user_token if no username and password' 2024-06-14 00:45:36,597 [ scc.merge] INFO 2024-06-14 00:45:36,597 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2024-06-14 00:45:36,597 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-14 00:45:36,597 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft) 2024-06-14 00:45:36,597 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,597 [ scc.merge] INFO 2024-06-14 00:45:36,597 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2024-06-14 00:45:36,598 [ scc.merge] INFO 2024-06-14 00:45:36,598 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests' 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' 2024-06-14 00:45:36,598 [ scc.merge] INFO 2024-06-14 00:45:36,598 [ scc.merge] INFO Repository: ome/omero-figure 2024-06-14 00:45:36,598 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (exclude comment) 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment) 2024-06-14 00:45:36,598 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,598 [ scc.merge] INFO 2024-06-14 00:45:36,598 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 549 will-moore 'Inset feature' 2024-06-14 00:45:36,598 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor' 2024-06-14 00:45:36,598 [ scc.merge] INFO 2024-06-14 00:45:36,598 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2024-06-14 00:45:36,598 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,599 [ scc.merge] INFO 2024-06-14 00:45:36,599 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,599 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2024-06-14 00:45:36,599 [ scc.merge] INFO 2024-06-14 00:45:36,599 [ scc.merge] INFO Repository: ome/omero-gallery 2024-06-14 00:45:36,599 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,599 [ scc.merge] INFO 2024-06-14 00:45:36,599 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,599 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2' 2024-06-14 00:45:36,599 [ scc.merge] INFO 2024-06-14 00:45:36,599 [ scc.merge] INFO Repository: ome/omero-iviewer 2024-06-14 00:45:36,599 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,599 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2024-06-14 00:45:36,599 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2024-06-14 00:45:36,599 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,599 [ scc.merge] INFO 2024-06-14 00:45:36,599 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,599 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2024-06-14 00:45:36,600 [ scc.merge] INFO 2024-06-14 00:45:36,600 [ scc.merge] INFO Repository: ome/omero-mapr 2024-06-14 00:45:36,600 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2024-06-14 00:45:36,600 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,600 [ scc.merge] INFO 2024-06-14 00:45:36,600 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2024-06-14 00:45:36,600 [ scc.merge] INFO 2024-06-14 00:45:36,600 [ scc.merge] INFO Repository: ome/omero-metadata 2024-06-14 00:45:36,600 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,600 [ scc.merge] INFO 2024-06-14 00:45:36,600 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2024-06-14 00:45:36,600 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2024-06-14 00:45:36,600 [ scc.merge] INFO 2024-06-14 00:45:36,601 [ scc.merge] INFO Repository: ome/omero-parade 2024-06-14 00:45:36,601 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2024-06-14 00:45:36,601 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,601 [ scc.merge] INFO 2024-06-14 00:45:36,601 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31' 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2' 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0' 2024-06-14 00:45:36,601 [ scc.merge] INFO 2024-06-14 00:45:36,601 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2024-06-14 00:45:36,601 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,601 [ scc.merge] INFO 2024-06-14 00:45:36,601 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,601 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel' 2024-06-14 00:45:36,601 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Repository: ome/omero-rois 2024-06-14 00:45:36,602 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,602 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-06-14 00:45:36,602 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,602 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,602 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id' 2024-06-14 00:45:36,602 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Repository: ome/omero-signup 2024-06-14 00:45:36,602 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,602 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,602 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2024-06-14 00:45:36,602 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2024-06-14 00:45:36,602 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,602 [ scc.merge] INFO 2024-06-14 00:45:36,602 [ scc.merge] INFO Merged PRs: 2024-06-14 00:45:36,602 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra' 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO Repository: ome/omero-upload 2024-06-14 00:45:36,603 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2024-06-14 00:45:36,603 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO Repository: ome/omero-web-zarr 2024-06-14 00:45:36,603 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,603 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2024-06-14 00:45:36,603 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,603 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2024-06-14 00:45:36,603 [ scc.merge] INFO 2024-06-14 00:45:36,603 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2024-06-14 00:45:36,604 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2024-06-14 00:45:36,604 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2024-06-14 00:45:36,604 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,604 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly' 2024-06-14 00:45:36,604 [ scc.merge] INFO 2024-06-14 00:45:36,604 [ scc.merge] INFO Repository: ome/scripts 2024-06-14 00:45:36,604 [ scc.merge] INFO Excluded PRs: 2024-06-14 00:45:36,604 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-06-14 00:45:36,604 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-06-14 00:45:36,604 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-06-14 00:45:36,605 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-06-14 00:45:36,605 [ scc.merge] INFO Already up to date. 2024-06-14 00:45:36,605 [ scc.merge] INFO 2024-06-14 00:45:36,605 [ scc.merge] INFO Conflicting PRs (not included): 2024-06-14 00:45:36,605 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-06-14 00:45:36,605 [ scc.merge] INFO 2024-06-14 00:45:36,605 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-06-14 00:45:36,605 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2024-06-14 00:45:36,613 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,620 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2024-06-14 00:45:36,621 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2024-06-14 00:45:36,628 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,635 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2024-06-14 00:45:36,635 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2024-06-14 00:45:36,642 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,648 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2024-06-14 00:45:36,648 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,662 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2024-06-14 00:45:36,663 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2024-06-14 00:45:36,669 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2024-06-14 00:45:36,676 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,681 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2024-06-14 00:45:36,681 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,687 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2024-06-14 00:45:36,687 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,692 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2024-06-14 00:45:36,693 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2024-06-14 00:45:36,699 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,704 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2024-06-14 00:45:36,704 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2024-06-14 00:45:36,710 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,717 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2024-06-14 00:45:36,717 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,723 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2024-06-14 00:45:36,723 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,728 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2024-06-14 00:45:36,728 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2024-06-14 00:45:36,734 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,740 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,741 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2024-06-14 00:45:36,741 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2024-06-14 00:45:36,747 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2024-06-14 00:45:36,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2024-06-14 00:45:36,753 [ scc.git] DEBUG Calling 'git remote' 2024-06-14 00:45:36,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: 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Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 83476f4] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 027b3e6 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from 53e3f42 nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 2ca566b Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from ffc7e075 nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from e5b3ca3 nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 56f4435 nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7b7a637 nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 9631b15 nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from e2fc5ec nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from 5d441c2 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from 18bccb6 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from 5c752d5 nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from c8610db nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from aca9e9c nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 67bb245 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from adfa132 nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 8da48e1 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 5a90893 nothing to commit, working tree clean [detached HEAD e00b93b] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2024-06-14 00:46:24,586 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2024-06-14 00:46:33,683 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2024-06-14 00:46:36,385 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-14 00:46:41,032 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2024-06-14 00:47:34,057 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS