Started by upstream project "Trigger" build number 224 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 199 [Pipeline] sh + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.13.0-py3-none-any.whl.metadata (3.4 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.16-py3-none-any.whl.metadata (6.4 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.5.20-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.13.0-py3-none-any.whl (31 kB) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.34.2-py3-none-any.whl (73 kB) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB) Using cached idna-3.16-py3-none-any.whl (74 kB) Using cached certifi-2026.5.20-py3-none-any.whl (134 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.5.20 cffi-2.0.0 charset_normalizer-3.4.7 cryptography-48.0.0 future-1.0.0 idna-3.16 pycparser-3.0 pyjwt-2.13.0 pynacl-1.6.2 requests-2.34.2 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-05-28 00:38:39,909 [ scc.config] DEBUG Found github.token 2026-05-28 00:38:39,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-28 00:38:40,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:40,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:41,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-28 00:38:41,159 [ scc.gh] DEBUG 4559 remaining from 5000 (Reset at 00:05 2026-05-28 00:38:41,160 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:38:41,162 [ scc.git] DEBUG Check current status 2026-05-28 00:38:41,162 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:38:41,164 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-28 00:38:41,165 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:38:41,210 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-28 00:38:41,212 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-28 00:38:41,215 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-28 00:38:41,218 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-28 00:38:41,223 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-28 00:38:41,225 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-28 00:38:41,228 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-28 00:38:41,231 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-28 00:38:41,234 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-28 00:38:41,237 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-28 00:38:41,240 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-28 00:38:41,242 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-28 00:38:41,245 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-28 00:38:41,248 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-28 00:38:41,251 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-28 00:38:41,254 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-28 00:38:41,257 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-28 00:38:41,259 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-28 00:38:41,262 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-28 00:38:41,264 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-28 00:38:41,267 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-28 00:38:41,271 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-28 00:38:41,273 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:38:41,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-28 00:38:42,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:38:42,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:38:43,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:38:43,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:38:43,558 [ scc.git] DEBUG Resetting... 2026-05-28 00:38:43,558 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-28 00:38:43,565 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-28 00:38:43,565 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-28 00:38:43,663 [ scc.git] DEBUG Check current status 2026-05-28 00:38:43,663 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:38:43,665 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-28 00:38:43,665 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:38:43,708 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-28 00:38:43,710 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-28 00:38:43,713 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-28 00:38:43,716 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-28 00:38:43,721 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-28 00:38:43,723 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-28 00:38:43,726 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-28 00:38:43,729 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-28 00:38:43,732 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-28 00:38:43,735 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-28 00:38:43,737 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-28 00:38:43,740 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-28 00:38:43,743 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-28 00:38:43,746 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-28 00:38:43,749 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-28 00:38:43,751 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-28 00:38:43,754 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-28 00:38:43,756 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-28 00:38:43,759 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-28 00:38:43,761 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-28 00:38:43,764 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-28 00:38:43,767 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-28 00:38:43,768 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-28 00:38:43,768 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-28 00:38:43,768 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-28 00:38:43,768 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-28 00:38:43,768 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-28 00:38:43,768 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:38:44,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-28 00:38:44,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-28 00:38:44,624 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:38:44,624 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-28 00:38:45,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-28 00:38:45,127 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:38:45,128 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-28 00:38:45,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-28 00:38:45,599 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:38:45,599 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-28 00:38:45,600 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:38:45,600 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:38:45,600 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:45,602 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:38:45,604 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:38:45,604 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:38:45,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:38:45,609 [ scc.git] DEBUG Already up to date. 2026-05-28 00:38:45,609 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-28 00:38:45,952 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:38:45,952 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-28 00:38:45,957 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-28 00:38:46,283 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:38:46,283 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-28 00:38:46,287 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-28 00:38:46,568 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:38:46,568 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-28 00:38:46,573 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:38:46,573 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:38:46,573 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:46,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-28 00:38:46,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:46,579 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-28 00:38:46,593 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:38:46,596 [ scc.git] DEBUG scripts | 2 +- 2026-05-28 00:38:46,596 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:38:46,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:46,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-28 00:38:46,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:46,794 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-28 00:38:46,807 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:38:46,810 [ scc.git] DEBUG omero-figure | 2 +- 2026-05-28 00:38:46,810 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:38:47,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:47,226 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-28 00:38:47,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:47,230 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-28 00:38:47,245 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:38:47,247 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-05-28 00:38:47,247 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:38:47,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:47,660 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:38:47,726 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-28 00:38:47,753 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-28 00:38:47,766 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-28 00:38:47,767 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:38:47,767 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:38:47,769 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:38:47,845 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f475491ae10> has no local changes 2026-05-28 00:38:47,845 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:38:47,913 [ scc.git] DEBUG [detached HEAD b84a27a] merge master -Dorg -Snone 2026-05-28 00:38:47,914 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-28 00:38:47,914 [ scc.merge] INFO Already up to date. 2026-05-28 00:38:47,914 [ scc.merge] INFO 2026-05-28 00:38:47,914 [ scc.merge] INFO Merged PRs: 2026-05-28 00:38:47,914 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-28 00:38:47,914 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-28 00:38:47,914 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-28 00:38:47,914 [ scc.merge] INFO 2026-05-28 00:38:47,914 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-28 00:38:47,914 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out 'e68b3e14e67ddf62a090e4f73d13d425ca807258' From https://github.com/ome/omero-iviewer * [new branch] dependabot/npm_and_yarn/multi-40cfb21e17 -> origin/dependabot/npm_and_yarn/multi-40cfb21e17 Submodule path 'omero-iviewer': checked out '3b7bb10968a7e0259067ce7dd2db1c0db594cf95' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-05-28 00:38:56,818 [ scc.config] DEBUG Found github.token 2026-05-28 00:38:56,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-28 00:38:57,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:57,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:38:57,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-28 00:38:57,892 [ scc.gh] DEBUG 4555 remaining from 5000 (Reset at 00:05 2026-05-28 00:38:57,893 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:38:57,895 [ scc.git] DEBUG Check current status 2026-05-28 00:38:57,896 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:38:57,898 [ scc.git] DEBUG b84a27a merge master -Dorg -Snone 2026-05-28 00:38:57,898 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:38:57,943 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-28 00:38:57,946 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-28 00:38:57,949 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-05-28 00:38:57,952 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-05-28 00:38:57,957 [ scc.git] DEBUG +e68b3e14e67ddf62a090e4f73d13d425ca807258 omero-figure (v8.0.1.rc2-6-ge68b3e14) 2026-05-28 00:38:57,960 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-28 00:38:57,963 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-28 00:38:57,966 [ scc.git] DEBUG +3b7bb10968a7e0259067ce7dd2db1c0db594cf95 omero-iviewer (v0.17.0-1-g3b7bb10) 2026-05-28 00:38:57,969 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-28 00:38:57,972 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-05-28 00:38:57,974 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-28 00:38:57,977 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-28 00:38:57,979 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-05-28 00:38:57,982 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-28 00:38:57,986 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-05-28 00:38:57,988 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-28 00:38:57,991 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-05-28 00:38:57,994 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-05-28 00:38:57,996 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-28 00:38:57,999 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-28 00:38:58,002 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-28 00:38:58,005 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-05-28 00:38:58,008 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:38:58,008 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-05-28 00:38:58,009 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-05-28 00:38:58,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-28 00:38:59,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:38:59,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:00,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:00,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:00,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:00,544 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-28 00:39:00,544 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:00,546 [ scc.git] DEBUG Check current status 2026-05-28 00:39:00,546 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:00,548 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-05-28 00:39:00,548 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:00,586 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:01,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-05-28 00:39:01,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:01,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:02,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:02,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:02,873 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:02,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:02,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-28 00:39:02,911 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:02,913 [ scc.git] DEBUG Check current status 2026-05-28 00:39:02,913 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:02,915 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-05-28 00:39:02,915 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:02,951 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:03,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-05-28 00:39:03,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:04,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:04,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:05,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:05,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:05,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:05,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-28 00:39:05,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:05,346 [ scc.git] DEBUG Check current status 2026-05-28 00:39:05,346 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:05,348 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-05-28 00:39:05,348 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:05,385 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:05,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-05-28 00:39:06,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:06,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:07,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:07,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:07,884 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:07,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:07,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-28 00:39:07,921 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:07,923 [ scc.git] DEBUG Check current status 2026-05-28 00:39:07,923 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:07,925 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-28 00:39:07,925 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:07,964 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:08,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-05-28 00:39:08,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:09,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:09,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:10,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:10,313 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:10,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:10,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-28 00:39:10,350 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:10,352 [ scc.git] DEBUG Check current status 2026-05-28 00:39:10,352 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:10,355 [ scc.git] DEBUG e68b3e14 Merge pull request #690 from ome/dependabot/npm_and_yarn/postcss-8.5.15 2026-05-28 00:39:10,355 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:10,391 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:10,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-05-28 00:39:11,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:11,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:12,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:12,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:12,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:12,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:12,978 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-28 00:39:12,978 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:12,980 [ scc.git] DEBUG Check current status 2026-05-28 00:39:12,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:12,982 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-05-28 00:39:12,982 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:13,019 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:13,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-05-28 00:39:14,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:14,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:15,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:15,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:15,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:15,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:15,549 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-28 00:39:15,549 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:15,551 [ scc.git] DEBUG Check current status 2026-05-28 00:39:15,551 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:15,553 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-05-28 00:39:15,553 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:15,590 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:16,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-05-28 00:39:16,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:17,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:17,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:17,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:17,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:17,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:17,992 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-28 00:39:17,992 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:17,994 [ scc.git] DEBUG Check current status 2026-05-28 00:39:17,994 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:17,996 [ scc.git] DEBUG 3b7bb10 add dev 2026-05-28 00:39:17,997 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:18,034 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:18,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-05-28 00:39:19,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:19,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:19,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:20,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:20,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:20,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:20,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-28 00:39:20,455 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:20,457 [ scc.git] DEBUG Check current status 2026-05-28 00:39:20,457 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:20,459 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-05-28 00:39:20,460 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:20,496 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:20,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-05-28 00:39:21,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:21,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:22,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:22,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:22,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:22,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:22,871 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-28 00:39:22,871 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:22,873 [ scc.git] DEBUG Check current status 2026-05-28 00:39:22,873 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:22,875 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-28 00:39:22,876 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:22,912 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:23,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-05-28 00:39:23,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:24,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:24,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:25,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:25,263 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:25,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:25,300 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-28 00:39:25,300 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:25,302 [ scc.git] DEBUG Check current status 2026-05-28 00:39:25,302 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:25,305 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-05-28 00:39:25,305 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:25,341 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:25,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-05-28 00:39:26,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:26,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:27,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:27,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:27,807 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:27,842 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:27,843 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-28 00:39:27,843 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:27,844 [ scc.git] DEBUG Check current status 2026-05-28 00:39:27,845 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:27,847 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-05-28 00:39:27,847 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:27,883 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:28,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-05-28 00:39:28,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:29,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:29,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:30,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:30,195 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:30,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:30,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-28 00:39:30,231 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:30,233 [ scc.git] DEBUG Check current status 2026-05-28 00:39:30,233 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:30,235 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-05-28 00:39:30,235 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:30,272 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:30,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-05-28 00:39:31,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:31,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:32,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:32,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:32,671 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:32,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:32,707 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-28 00:39:32,707 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:32,709 [ scc.git] DEBUG Check current status 2026-05-28 00:39:32,709 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:32,711 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-05-28 00:39:32,712 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:32,748 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:33,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-05-28 00:39:33,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:34,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:34,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:35,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:35,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:35,226 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:35,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-28 00:39:35,227 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:35,229 [ scc.git] DEBUG Check current status 2026-05-28 00:39:35,229 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:35,231 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-05-28 00:39:35,231 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:35,268 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:35,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-28 00:39:35,609 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-28 00:39:35,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-05-28 00:39:36,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:36,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:37,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:37,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:37,817 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:37,854 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:37,855 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-28 00:39:37,855 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:37,857 [ scc.git] DEBUG Check current status 2026-05-28 00:39:37,857 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:37,859 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-05-28 00:39:37,859 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:37,896 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:38,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-05-28 00:39:38,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:39,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:39,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:40,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:40,203 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:40,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:40,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-28 00:39:40,239 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:40,241 [ scc.git] DEBUG Check current status 2026-05-28 00:39:40,241 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:40,243 [ scc.git] DEBUG 160d894 Fix display of code 2026-05-28 00:39:40,243 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:40,281 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:40,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-05-28 00:39:41,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:41,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:42,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:42,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:42,603 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:42,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:42,639 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-28 00:39:42,639 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:42,641 [ scc.git] DEBUG Check current status 2026-05-28 00:39:42,641 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:42,643 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-28 00:39:42,643 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:42,680 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:42,680 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-05-28 00:39:43,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-05-28 00:39:43,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:44,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:44,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:44,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:44,999 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:45,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:45,035 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-28 00:39:45,036 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:45,038 [ scc.git] DEBUG Check current status 2026-05-28 00:39:45,038 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:45,040 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-05-28 00:39:45,040 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:45,076 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:45,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-28 00:39:45,430 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-28 00:39:45,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-05-28 00:39:46,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:46,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:47,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:47,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:47,629 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:47,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:47,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-28 00:39:47,666 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:47,668 [ scc.git] DEBUG Check current status 2026-05-28 00:39:47,668 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:47,670 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-05-28 00:39:47,670 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:47,707 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:48,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-28 00:39:48,041 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-28 00:39:48,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-05-28 00:39:48,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:49,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:49,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:50,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:50,179 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:50,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:50,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-28 00:39:50,215 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:50,217 [ scc.git] DEBUG Check current status 2026-05-28 00:39:50,217 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:50,219 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-05-28 00:39:50,220 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:50,256 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:50,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-05-28 00:39:51,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:51,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:52,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:52,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:52,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:52,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:52,805 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-28 00:39:52,805 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-28 00:39:52,807 [ scc.git] DEBUG Check current status 2026-05-28 00:39:52,807 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:52,809 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-05-28 00:39:52,809 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:52,846 [ scc.config] DEBUG Found remote.origin.url 2026-05-28 00:39:52,846 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-05-28 00:39:53,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-28 00:39:53,360 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-28 00:39:53,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-05-28 00:39:54,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-28 00:39:54,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-28 00:39:55,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-28 00:39:55,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-28 00:39:55,560 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:39:55,596 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:39:55,596 [ scc.git] DEBUG Resetting... 2026-05-28 00:39:55,596 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-28 00:39:55,603 [ scc.git] DEBUG HEAD is now at b84a27a merge master -Dorg -Snone 2026-05-28 00:39:55,603 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-28 00:39:55,652 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-05-28 00:39:55,667 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-05-28 00:39:55,716 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-28 00:39:55,752 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-28 00:39:55,765 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-05-28 00:39:55,783 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-05-28 00:39:55,797 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-05-28 00:39:55,811 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-05-28 00:39:55,822 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-05-28 00:39:55,846 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-28 00:39:55,849 [ scc.git] DEBUG Check current status 2026-05-28 00:39:55,849 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-28 00:39:55,851 [ scc.git] DEBUG b84a27a merge master -Dorg -Snone 2026-05-28 00:39:55,851 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-28 00:39:55,893 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-28 00:39:55,896 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-28 00:39:55,898 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-28 00:39:55,901 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-28 00:39:55,906 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-05-28 00:39:55,908 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-28 00:39:55,911 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-28 00:39:55,914 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-05-28 00:39:55,917 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-28 00:39:55,920 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-28 00:39:55,923 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-28 00:39:55,925 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-28 00:39:55,928 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-28 00:39:55,931 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-28 00:39:55,934 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-28 00:39:55,937 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-28 00:39:55,939 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-28 00:39:55,941 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-28 00:39:55,944 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-28 00:39:55,946 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-28 00:39:55,949 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-28 00:39:55,953 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-05-28 00:39:55,953 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-28 00:39:55,953 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-28 00:39:55,953 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-28 00:39:55,953 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-28 00:39:55,953 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-28 00:39:55,953 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-05-28 00:39:55,953 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:39:56,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-28 00:39:56,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-28 00:39:56,775 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:39:57,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-28 00:39:58,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:39:58,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-28 00:39:59,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:39:59,024 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-28 00:39:59,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-28 00:39:59,520 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:40:00,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:00,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:01,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:01,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:40:01,543 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-28 00:40:02,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-28 00:40:02,037 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:40:02,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:03,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:03,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:04,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:40:04,103 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-28 00:40:04,103 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:40:04,103 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:04,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:04,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:40:04,107 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:40:04,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:40:04,110 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:40:04,113 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:04,113 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-28 00:40:04,497 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:40:04,497 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-28 00:40:04,501 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-28 00:40:04,803 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:40:04,803 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-28 00:40:04,807 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-28 00:40:05,122 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-28 00:40:05,122 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-28 00:40:05,126 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:40:05,126 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:05,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:05,128 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-28 00:40:05,131 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:05,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-28 00:40:05,136 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:05,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:05,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-28 00:40:05,340 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:05,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-28 00:40:05,345 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:05,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:05,771 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-28 00:40:05,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:05,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-28 00:40:05,778 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:06,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:06,201 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:40:06,250 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:06,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:06,252 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:40:06,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-05-28 00:40:06,668 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:40:06,668 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-28 00:40:06,668 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:06,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:06,670 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:40:06,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:40:06,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:40:06,674 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:40:06,677 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:06,677 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:40:06,677 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:06,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:06,679 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:40:06,715 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:06,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:06,718 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:40:06,753 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:40:06,756 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982b27c50> has no local changes 2026-05-28 00:40:06,756 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:40:06,761 [ scc.git] DEBUG [detached HEAD d4ded43] merge master -Dorg -Ssuccess-only 2026-05-28 00:40:06,762 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:40:06,762 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:40:07,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-05-28 00:40:07,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-05-28 00:40:07,732 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:40:08,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:09,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:09,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:10,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:10,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:40:10,545 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:40:11,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-05-28 00:40:11,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-05-28 00:40:11,538 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:40:11,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-28 00:40:11,538 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:11,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:11,540 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:40:11,543 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:40:11,543 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:40:11,545 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:40:11,548 [ scc.git] DEBUG Already up to date. 2026-05-28 00:40:11,548 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-05-28 00:40:11,903 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-05-28 00:40:11,903 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-05-28 00:40:11,907 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:40:11,907 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:11,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:11,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-28 00:40:11,912 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:11,914 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-28 00:40:11,919 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:40:11,922 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:40:11,922 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:40:12,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:12,108 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:40:12,145 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:12,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:12,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:40:12,183 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:40:12,186 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982b09150> has no local changes 2026-05-28 00:40:12,186 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:40:12,192 [ scc.git] DEBUG [detached HEAD 105550c] merge master -Dorg -Ssuccess-only 2026-05-28 00:40:12,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:40:12,192 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:40:12,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-05-28 00:40:13,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-05-28 00:40:13,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-05-28 00:40:14,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:14,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:15,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:15,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:16,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:40:16,279 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-05-28 00:40:16,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-05-28 00:40:17,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-05-28 00:40:17,253 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:40:17,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-28 00:40:17,253 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:17,253 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:17,256 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:40:17,258 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:40:17,258 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:40:17,260 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:40:17,267 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-05-28 00:40:17,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-05-28 00:40:18,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-05-28 00:40:19,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-05-28 00:40:20,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-05-28 00:40:20,120 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-05-28 00:40:20,483 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-05-28 00:40:20,483 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-05-28 00:40:20,487 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:40:20,487 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:20,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:20,489 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-28 00:40:20,492 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:20,494 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-28 00:40:20,502 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-05-28 00:40:20,503 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:40:20,506 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-05-28 00:40:20,506 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-05-28 00:40:20,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:20,683 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:40:20,719 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:20,719 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:20,721 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:40:20,758 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:40:20,761 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982becb10> has no local changes 2026-05-28 00:40:20,761 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:40:20,767 [ scc.git] DEBUG [detached HEAD 97d8c57] merge master -Dorg -Ssuccess-only 2026-05-28 00:40:20,767 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:40:20,767 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:40:21,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-05-28 00:40:21,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/196 HTTP/1.1" 200 None 2026-05-28 00:40:22,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:22,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:23,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/7c3a75b5668548f95e24b72bb80dcaf4e323dc9c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:23,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-05-28 00:40:24,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:24,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:25,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:25,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-05-28 00:40:26,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:27,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:27,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:28,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:28,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:29,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:29,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-05-28 00:40:29,800 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-05-28 00:40:30,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-05-28 00:40:30,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-05-28 00:40:31,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:31,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:32,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:32,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:33,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:33,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:34,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-05-28 00:40:34,302 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-28 00:40:34,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-05-28 00:40:35,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-05-28 00:40:35,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-05-28 00:40:36,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-05-28 00:40:36,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:37,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:37,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:38,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:38,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:39,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:39,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-05-28 00:40:39,873 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-28 00:40:40,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-05-28 00:40:40,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-05-28 00:40:41,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:41,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:42,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:40:42,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:43,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-05-28 00:40:43,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-28 00:40:44,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-05-28 00:40:44,560 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-05-28 00:40:45,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-05-28 00:40:45,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-05-28 00:40:46,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-05-28 00:40:46,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-05-28 00:40:46,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-05-28 00:40:47,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-05-28 00:40:48,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-05-28 00:40:48,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-05-28 00:40:48,641 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:40:48,641 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-28 00:40:48,641 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:48,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:48,644 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:40:48,646 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:40:48,646 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:40:48,649 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:40:48,661 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-05-28 00:40:49,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-05-28 00:40:50,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-05-28 00:40:50,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-05-28 00:40:51,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-05-28 00:40:52,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-05-28 00:40:53,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-05-28 00:40:54,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-05-28 00:40:54,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-05-28 00:40:55,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-05-28 00:40:56,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-05-28 00:40:56,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-05-28 00:40:57,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-05-28 00:40:57,528 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-05-28 00:40:57,891 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-28 00:40:57,891 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-05-28 00:40:57,895 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-05-28 00:40:58,223 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-28 00:40:58,223 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-05-28 00:40:58,227 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-05-28 00:40:58,534 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-28 00:40:58,534 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-05-28 00:40:58,538 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-05-28 00:40:58,847 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-28 00:40:58,847 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-05-28 00:40:58,851 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:40:58,851 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:40:58,852 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:58,854 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-28 00:40:58,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:58,860 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging README.rst 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-28 00:40:58,872 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-28 00:40:58,873 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:40:58,873 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:40:58,875 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:58,879 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-28 00:40:59,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:59,076 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-28 00:40:59,079 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:59,081 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/util.py - src/omero_zarr/masks.py - src/omero_zarr/cli.py - src/omero_zarr/raw_pixels.py --conflicts 2026-05-28 00:40:59,083 [ scc.config] DEBUG Found github.token 2026-05-28 00:40:59,083 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-05-28 00:40:59,083 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-28 00:40:59,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:59,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-28 00:40:59,097 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-28 00:40:59,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-28 00:40:59,097 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-28 00:40:59,097 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-28 00:40:59,098 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:40:59,098 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:40:59,100 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:59,104 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-28 00:40:59,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:59,510 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-28 00:40:59,513 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:59,516 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - src/omero_zarr/masks.py - test/integration/clitest/test_export.py - Upstream changes - src/omero_zarr/masks.py - test/integration/clitest/test_export.py --conflicts 2026-05-28 00:40:59,518 [ scc.config] DEBUG Found github.token 2026-05-28 00:40:59,518 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-05-28 00:40:59,518 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-28 00:40:59,521 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:59,523 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-28 00:40:59,532 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-28 00:40:59,532 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-05-28 00:40:59,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-05-28 00:40:59,532 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-05-28 00:40:59,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-05-28 00:40:59,532 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:40:59,532 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:40:59,535 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:59,539 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-28 00:40:59,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:40:59,970 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-28 00:40:59,973 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-28 00:40:59,976 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - Upstream changes - test/integration/clitest/test_import.py - src/omero_zarr/zarr_import.py --conflicts 2026-05-28 00:40:59,978 [ scc.config] DEBUG Found github.token 2026-05-28 00:40:59,978 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-05-28 00:40:59,978 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-28 00:40:59,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:40:59,982 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-28 00:40:59,990 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:40:59,993 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-05-28 00:40:59,993 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-05-28 00:40:59,993 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-05-28 00:41:00,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:41:00,411 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:41:00,448 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:00,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:00,451 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:41:00,486 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:41:00,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982b9d5d0> has no local changes 2026-05-28 00:41:00,490 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:41:00,495 [ scc.git] DEBUG [detached HEAD ffb9f45] merge master -Dorg -Ssuccess-only 2026-05-28 00:41:00,495 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:41:00,496 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:41:01,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-05-28 00:41:01,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686 HTTP/1.1" 200 None 2026-05-28 00:41:02,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686/comments HTTP/1.1" 200 None 2026-05-28 00:41:02,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:03,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:03,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:41:04,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:04,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fd09cda763a6c8192985a9d4e045eb3903f04d15?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:04,743 [ scc.repo] DEBUG - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-28 00:41:05,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-05-28 00:41:05,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-05-28 00:41:05,728 [ scc.repo] DEBUG # ... Include label: include 2026-05-28 00:41:06,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:06,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:07,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:41:07,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:08,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:08,463 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-28 00:41:08,463 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:41:08,463 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-28 00:41:08,463 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:08,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:08,466 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:41:08,468 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:41:08,469 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:41:08,474 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:41:08,529 [ scc.git] DEBUG Updating 9cc36cde..e68b3e14 2026-05-28 00:41:09,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/690 HTTP/1.1" 200 None 2026-05-28 00:41:09,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/681 HTTP/1.1" 200 None 2026-05-28 00:41:10,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/688 HTTP/1.1" 200 None 2026-05-28 00:41:11,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-05-28 00:41:11,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-05-28 00:41:12,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-05-28 00:41:13,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-05-28 00:41:13,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-05-28 00:41:14,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-05-28 00:41:15,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-05-28 00:41:15,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-05-28 00:41:16,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-05-28 00:41:17,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-05-28 00:41:18,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-05-28 00:41:19,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-05-28 00:41:19,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-05-28 00:41:20,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-05-28 00:41:21,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-05-28 00:41:21,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-05-28 00:41:22,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-05-28 00:41:23,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-05-28 00:41:23,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-05-28 00:41:24,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-05-28 00:41:25,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-05-28 00:41:26,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-05-28 00:41:26,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-05-28 00:41:27,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-05-28 00:41:28,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-05-28 00:41:29,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-05-28 00:41:29,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-05-28 00:41:30,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-05-28 00:41:31,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-05-28 00:41:31,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-05-28 00:41:32,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-05-28 00:41:33,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-05-28 00:41:33,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-05-28 00:41:34,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-05-28 00:41:35,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-05-28 00:41:36,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-05-28 00:41:36,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-05-28 00:41:37,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-05-28 00:41:38,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-05-28 00:41:39,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-05-28 00:41:39,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-05-28 00:41:40,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-05-28 00:41:40,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-05-28 00:41:41,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-05-28 00:41:41,636 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-05-28 00:41:41,993 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-28 00:41:41,993 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-05-28 00:41:41,998 [ scc.git] DEBUG Calling 'git fetch origin pull/686/head' 2026-05-28 00:41:42,333 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-28 00:41:42,333 [ scc.git] DEBUG * branch refs/pull/686/head -> FETCH_HEAD 2026-05-28 00:41:42,338 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:41:42,338 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:42,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:42,340 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-28 00:41:42,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:42,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-28 00:41:42,389 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-05-28 00:41:42,389 [ scc.git] DEBUG Auto-merging src/index.html 2026-05-28 00:41:42,389 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-05-28 00:41:42,390 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:41:42,395 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-05-28 00:41:42,395 [ scc.git] DEBUG src/index.html | 11 ++ 2026-05-28 00:41:42,395 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-05-28 00:41:42,396 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-05-28 00:41:42,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:41:42,580 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-28 00:41:42,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:42,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 686 (Add note about zarr etc requirement for export script with zarr images) fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-28 00:41:42,604 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:41:42,607 [ scc.git] DEBUG README.rst | 40 +++++++++++++++++++++------------------- 2026-05-28 00:41:42,607 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 19 deletions(-) 2026-05-28 00:41:43,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:41:43,093 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:41:43,129 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:43,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:43,131 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:41:43,165 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:41:43,171 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981998b50> has no local changes 2026-05-28 00:41:43,171 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Updating 9cc36cde..e68b3e14 Previously merged: - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:41:43,178 [ scc.git] DEBUG [detached HEAD 76930f8e] merge master -Dorg -Ssuccess-only 2026-05-28 00:41:43,178 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:41:43,178 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:41:43,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-05-28 00:41:44,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-05-28 00:41:44,168 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:41:44,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:45,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:45,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:41:46,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:46,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:46,838 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:41:47,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-05-28 00:41:47,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-05-28 00:41:48,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:48,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:49,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:49,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:49,941 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-05-28 00:41:49,941 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:41:49,941 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-28 00:41:49,941 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:49,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:49,944 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:41:49,946 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:41:49,946 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:41:49,948 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:41:49,951 [ scc.git] DEBUG Already up to date. 2026-05-28 00:41:49,951 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-05-28 00:41:50,311 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-28 00:41:50,311 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-05-28 00:41:50,315 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-05-28 00:41:50,659 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-28 00:41:50,659 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-05-28 00:41:50,662 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:41:50,662 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:50,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:50,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-28 00:41:50,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:50,669 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-28 00:41:50,675 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-05-28 00:41:50,676 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:41:50,678 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-05-28 00:41:50,678 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-05-28 00:41:50,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:41:50,869 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-28 00:41:50,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:50,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-28 00:41:50,881 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:41:50,883 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:41:50,883 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:41:51,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:41:51,309 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:41:51,345 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:41:51,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:41:51,347 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:41:51,383 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:41:51,386 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982b2ec90> has no local changes 2026-05-28 00:41:51,386 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:41:51,392 [ scc.git] DEBUG [detached HEAD 986d445] merge master -Dorg -Ssuccess-only 2026-05-28 00:41:51,392 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:41:51,392 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:41:51,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-05-28 00:41:52,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-05-28 00:41:52,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-05-28 00:41:53,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-05-28 00:41:53,519 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:41:54,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:54,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:55,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:55,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:55,602 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-28 00:41:56,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-05-28 00:41:56,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-05-28 00:41:57,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-05-28 00:41:57,235 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:41:57,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:58,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:41:58,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-28 00:41:59,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:41:59,313 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-28 00:41:59,807 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-05-28 00:41:59,807 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:00,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:00,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:01,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:01,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:01,935 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-28 00:42:02,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-05-28 00:42:02,410 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:03,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:03,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:04,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:04,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:04,671 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-28 00:42:05,156 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-05-28 00:42:05,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-05-28 00:42:05,664 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:06,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:06,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:07,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:07,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:07,808 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-28 00:42:08,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-05-28 00:42:08,303 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:08,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:09,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:10,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:10,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:10,592 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-28 00:42:11,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-05-28 00:42:11,114 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:11,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:12,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:12,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:13,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:13,297 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-28 00:42:13,297 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:42:13,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-28 00:42:13,298 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:13,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:13,300 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:42:13,303 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:42:13,303 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:42:13,305 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:42:13,308 [ scc.git] DEBUG Already up to date. 2026-05-28 00:42:13,308 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-05-28 00:42:13,676 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:13,676 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-05-28 00:42:13,680 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-05-28 00:42:14,006 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:14,006 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-05-28 00:42:14,010 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-05-28 00:42:14,358 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:14,359 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-05-28 00:42:14,363 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-05-28 00:42:14,681 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:14,681 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-05-28 00:42:14,685 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-05-28 00:42:15,032 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:15,032 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-05-28 00:42:15,037 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-05-28 00:42:15,349 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:15,349 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-05-28 00:42:15,353 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-05-28 00:42:15,656 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-28 00:42:15,656 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-05-28 00:42:15,660 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:42:15,660 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:15,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:15,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-28 00:42:15,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:15,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-28 00:42:15,674 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:15,678 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-28 00:42:15,678 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-28 00:42:16,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:16,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-28 00:42:16,040 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:16,042 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-28 00:42:16,056 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:16,056 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:16,060 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-05-28 00:42:16,060 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-05-28 00:42:16,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:16,479 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-28 00:42:16,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:16,483 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-28 00:42:16,498 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:16,498 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-28 00:42:16,499 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:42:16,499 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:42:16,501 [ scc.git] DEBUG Calling 'git reset --hard b8d14b72d74ed96e8bacc249bf2f49b647dacf90' 2026-05-28 00:42:16,506 [ scc.git] DEBUG HEAD is now at b8d14b7 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-05-28 00:42:16,919 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:16,920 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-28 00:42:16,922 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-28 00:42:16,924 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-05-28 00:42:16,927 [ scc.config] DEBUG Found github.token 2026-05-28 00:42:16,927 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-05-28 00:42:16,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-28 00:42:16,929 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:16,931 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-28 00:42:16,946 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:16,946 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:16,951 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-05-28 00:42:16,951 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-05-28 00:42:17,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:17,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-28 00:42:17,365 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:17,367 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-28 00:42:17,380 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:17,381 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:17,385 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-05-28 00:42:17,385 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-05-28 00:42:17,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:17,799 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-28 00:42:17,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:17,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-28 00:42:17,818 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:17,818 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-28 00:42:17,819 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:42:17,819 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:42:17,821 [ scc.git] DEBUG Calling 'git reset --hard 24443131c46b5fad8ba8eaa8cd61eb7dba6ad2cc' 2026-05-28 00:42:17,826 [ scc.git] DEBUG HEAD is now at 2444313 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-28 00:42:18,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:18,258 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-28 00:42:18,260 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-28 00:42:18,262 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-05-28 00:42:18,264 [ scc.config] DEBUG Found github.token 2026-05-28 00:42:18,264 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-05-28 00:42:18,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-28 00:42:18,267 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:18,269 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-28 00:42:18,285 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:42:18,285 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-28 00:42:18,285 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:42:18,286 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:42:18,288 [ scc.git] DEBUG Calling 'git reset --hard 24443131c46b5fad8ba8eaa8cd61eb7dba6ad2cc' 2026-05-28 00:42:18,292 [ scc.git] DEBUG HEAD is now at 2444313 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-28 00:42:18,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:18,706 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-28 00:42:18,709 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-28 00:42:18,711 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-05-28 00:42:18,713 [ scc.config] DEBUG Found github.token 2026-05-28 00:42:18,713 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-05-28 00:42:18,713 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:42:18,748 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:18,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:18,750 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:42:18,786 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:42:18,790 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819bc190> has no local changes 2026-05-28 00:42:18,790 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:42:18,797 [ scc.git] DEBUG [detached HEAD 75f00ba] merge master -Dorg -Ssuccess-only 2026-05-28 00:42:18,797 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:42:18,797 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:42:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-05-28 00:42:19,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/535 HTTP/1.1" 200 None 2026-05-28 00:42:19,844 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:20,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:21,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:21,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:42:22,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/46500d0a497fc9945eeca87fd36672b2bf8d6e79?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:22,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/46500d0a497fc9945eeca87fd36672b2bf8d6e79?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:22,588 [ scc.repo] DEBUG - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-05-28 00:42:23,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/534 HTTP/1.1" 200 None 2026-05-28 00:42:23,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/64b0532c33f7485d4c711bf77a426e63007e2f87?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:24,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/64b0532c33f7485d4c711bf77a426e63007e2f87/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:24,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/64b0532c33f7485d4c711bf77a426e63007e2f87/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:42:25,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/64b0532c33f7485d4c711bf77a426e63007e2f87?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:25,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/64b0532c33f7485d4c711bf77a426e63007e2f87?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:25,652 [ scc.repo] DEBUG - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-05-28 00:42:26,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/532 HTTP/1.1" 200 None 2026-05-28 00:42:26,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527 HTTP/1.1" 200 None 2026-05-28 00:42:27,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/527/comments HTTP/1.1" 200 None 2026-05-28 00:42:27,171 [ scc.repo] DEBUG # ... Include label: include 2026-05-28 00:42:27,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:28,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:28,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:42:29,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:29,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/d137ae19ea7fca7bb2e8514b24f48f90e9573f61?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:29,796 [ scc.repo] DEBUG - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-28 00:42:30,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-05-28 00:42:30,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-05-28 00:42:31,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-05-28 00:42:31,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-05-28 00:42:32,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-05-28 00:42:32,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-05-28 00:42:33,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-05-28 00:42:33,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-05-28 00:42:34,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-05-28 00:42:34,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:35,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:35,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:36,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:36,224 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-28 00:42:36,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-05-28 00:42:37,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-05-28 00:42:37,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:38,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:42:38,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-28 00:42:39,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/a081a9f2892763bd49a7ad7ba425965150e76f97?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:42:39,226 [ scc.repo] DEBUG - PR 227 will-moore 'Vectortile investigation' 2026-05-28 00:42:39,227 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:42:39,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-28 00:42:39,227 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:39,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:39,230 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:42:39,232 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:42:39,232 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:42:39,236 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:42:39,274 [ scc.git] DEBUG Updating 7a798ce..3b7bb10 2026-05-28 00:42:39,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/533 HTTP/1.1" 200 None 2026-05-28 00:42:40,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/530 HTTP/1.1" 200 None 2026-05-28 00:42:41,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/528 HTTP/1.1" 200 None 2026-05-28 00:42:41,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/529 HTTP/1.1" 200 None 2026-05-28 00:42:42,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/526 HTTP/1.1" 200 None 2026-05-28 00:42:43,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-05-28 00:42:43,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-05-28 00:42:44,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-05-28 00:42:45,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-05-28 00:42:45,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-05-28 00:42:46,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-05-28 00:42:47,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-05-28 00:42:48,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-05-28 00:42:48,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-05-28 00:42:49,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-05-28 00:42:50,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-05-28 00:42:50,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-05-28 00:42:51,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-05-28 00:42:52,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-05-28 00:42:53,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-05-28 00:42:53,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-05-28 00:42:53,628 [ scc.git] DEBUG Calling 'git fetch origin pull/227/head' 2026-05-28 00:42:53,992 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-28 00:42:53,992 [ scc.git] DEBUG * branch refs/pull/227/head -> FETCH_HEAD 2026-05-28 00:42:53,996 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-05-28 00:42:54,335 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-28 00:42:54,335 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-05-28 00:42:54,339 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2026-05-28 00:42:54,618 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-28 00:42:54,618 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2026-05-28 00:42:54,622 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2026-05-28 00:42:54,910 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-28 00:42:54,911 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2026-05-28 00:42:54,914 [ scc.git] DEBUG Calling 'git fetch origin pull/535/head' 2026-05-28 00:42:55,256 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-28 00:42:55,256 [ scc.git] DEBUG * branch refs/pull/535/head -> FETCH_HEAD 2026-05-28 00:42:55,260 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:42:55,260 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:55,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:55,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-28 00:42:55,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:55,273 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 227 (Vectortile investigation) a081a9f2892763bd49a7ad7ba425965150e76f97' 2026-05-28 00:42:55,297 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py 2026-05-28 00:42:55,297 [ scc.git] DEBUG Auto-merging src/utils/constants.js 2026-05-28 00:42:55,297 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-28 00:42:55,298 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:55,304 [ scc.git] DEBUG plugin/omero_iviewer/urls.py | 7 +- 2026-05-28 00:42:55,304 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 88 ++++++++++ 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/events/events.js | 2 + 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/model/regions_info.js | 37 +++- 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/regions/regions-list.js | 26 +++ 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/utils/constants.js | 6 + 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 48 +++++- 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/Viewer.js | 78 +++++++-- 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/format/OmeJSON.js | 79 +++++++++ 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/source/Regions.js | 56 ++++++ 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/source/TiledRegions.js | 277 ++++++++++++++++++++++++++++++ 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/utils/Regions.js | 51 ++++-- 2026-05-28 00:42:55,304 [ scc.git] DEBUG src/viewers/viewer/utils/Style.js | 19 +- 2026-05-28 00:42:55,305 [ scc.git] DEBUG 13 files changed, 727 insertions(+), 47 deletions(-) 2026-05-28 00:42:55,305 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/format/OmeJSON.js 2026-05-28 00:42:55,305 [ scc.git] DEBUG create mode 100644 src/viewers/viewer/source/TiledRegions.js 2026-05-28 00:42:55,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:55,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-28 00:42:55,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:55,501 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-28 00:42:55,519 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-05-28 00:42:55,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:55,523 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-05-28 00:42:55,523 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-05-28 00:42:55,523 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-05-28 00:42:55,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:55,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d137ae19ea7fca7bb2e8514b24f48f90e9573f61' 2026-05-28 00:42:55,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:55,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add grid overlay feature with configurable cell size and labels) d137ae19ea7fca7bb2e8514b24f48f90e9573f61' 2026-05-28 00:42:55,984 [ scc.git] DEBUG Auto-merging src/viewers/ol3-viewer.js 2026-05-28 00:42:55,985 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:55,988 [ scc.git] DEBUG css/app.css | 327 +++++++++++++++++++++++++++++++++++ 2026-05-28 00:42:55,989 [ scc.git] DEBUG src/viewers/ol3-viewer.html | 71 ++++++-- 2026-05-28 00:42:55,989 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 81 +++++++++ 2026-05-28 00:42:55,989 [ scc.git] DEBUG src/viewers/viewer/grid-overlay.js | 344 +++++++++++++++++++++++++++++++++++++ 2026-05-28 00:42:55,989 [ scc.git] DEBUG 4 files changed, 807 insertions(+), 16 deletions(-) 2026-05-28 00:42:55,989 [ scc.git] DEBUG mode change 100644 => 100755 css/app.css 2026-05-28 00:42:55,989 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.html 2026-05-28 00:42:55,989 [ scc.git] DEBUG mode change 100644 => 100755 src/viewers/ol3-viewer.js 2026-05-28 00:42:55,989 [ scc.git] DEBUG create mode 100755 src/viewers/viewer/grid-overlay.js 2026-05-28 00:42:56,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:56,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64b0532c33f7485d4c711bf77a426e63007e2f87' 2026-05-28 00:42:56,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:56,393 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (Fix settings.md link to master branch. Move iviewer redirect settings) 64b0532c33f7485d4c711bf77a426e63007e2f87' 2026-05-28 00:42:56,409 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:56,412 [ scc.git] DEBUG README.rst | 2 +- 2026-05-28 00:42:56,412 [ scc.git] DEBUG docs/settings.md | 16 ++++++++++++++++ 2026-05-28 00:42:56,412 [ scc.git] DEBUG plugin/omero_iviewer/README.rst | 15 +++++---------- 2026-05-28 00:42:56,412 [ scc.git] DEBUG 3 files changed, 22 insertions(+), 11 deletions(-) 2026-05-28 00:42:56,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:56,815 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-05-28 00:42:56,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:56,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 535 (Bump tmp and eslint) 46500d0a497fc9945eeca87fd36672b2bf8d6e79' 2026-05-28 00:42:56,844 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:42:56,856 [ scc.git] DEBUG package-lock.json | 2238 +++++++++++++++++++++-------------------------------- 2026-05-28 00:42:56,856 [ scc.git] DEBUG package.json | 2 +- 2026-05-28 00:42:56,856 [ scc.git] DEBUG 2 files changed, 869 insertions(+), 1371 deletions(-) 2026-05-28 00:42:57,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:42:57,244 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:42:57,282 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:42:57,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:42:57,284 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:42:57,321 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:42:57,328 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819ce8d0> has no local changes 2026-05-28 00:42:57,328 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 532 will-moore 'Zarr layers' (stage: draft) - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..3b7bb10 Previously merged: - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 535 dependabot[bot] 'Bump tmp and eslint' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:42:57,334 [ scc.git] DEBUG [detached HEAD afe26e2] merge master -Dorg -Ssuccess-only 2026-05-28 00:42:57,334 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:42:57,335 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:42:57,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-05-28 00:42:58,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-05-28 00:42:59,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-05-28 00:42:59,027 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:42:59,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:00,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:00,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:43:01,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:01,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:01,744 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:43:02,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-05-28 00:43:02,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:03,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:03,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:04,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:04,232 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:43:04,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-05-28 00:43:05,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-05-28 00:43:05,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:06,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:06,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:07,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:07,235 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-05-28 00:43:07,235 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:07,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-28 00:43:07,236 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:07,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:07,238 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:07,240 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:07,240 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:07,243 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:07,246 [ scc.git] DEBUG Already up to date. 2026-05-28 00:43:07,246 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-28 00:43:07,600 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-28 00:43:07,600 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-28 00:43:07,604 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-05-28 00:43:07,953 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-28 00:43:07,953 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-05-28 00:43:07,957 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-05-28 00:43:08,292 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-28 00:43:08,292 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-05-28 00:43:08,296 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:08,296 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:08,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:08,298 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-28 00:43:08,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:08,303 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-28 00:43:08,311 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:08,314 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-05-28 00:43:08,314 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-05-28 00:43:08,314 [ scc.git] DEBUG requirements.txt | 2 +- 2026-05-28 00:43:08,314 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-05-28 00:43:08,314 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-05-28 00:43:08,314 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-05-28 00:43:08,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:08,505 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-28 00:43:08,508 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:08,510 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-28 00:43:08,518 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:08,520 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:43:08,520 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:43:08,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:08,948 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-28 00:43:08,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:08,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-28 00:43:08,960 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-05-28 00:43:08,960 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-05-28 00:43:08,960 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:43:08,960 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:43:08,963 [ scc.git] DEBUG Calling 'git reset --hard dcaaa92cfb816c1ae29d8e48b56058823ceb9427' 2026-05-28 00:43:08,966 [ scc.git] DEBUG HEAD is now at dcaaa92 merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-05-28 00:43:09,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:09,379 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-28 00:43:09,381 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-05-28 00:43:09,384 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-05-28 00:43:09,386 [ scc.config] DEBUG Found github.token 2026-05-28 00:43:09,386 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-05-28 00:43:09,386 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:09,423 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:09,423 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:09,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:09,462 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:09,465 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819cfd50> has no local changes 2026-05-28 00:43:09,465 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:09,471 [ scc.git] DEBUG [detached HEAD 90cd28f] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:09,471 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:09,471 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:10,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-05-28 00:43:10,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-05-28 00:43:11,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-05-28 00:43:11,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:12,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:12,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:13,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:13,130 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-28 00:43:13,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-05-28 00:43:14,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-05-28 00:43:14,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:15,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:15,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:16,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:16,117 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-28 00:43:16,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-05-28 00:43:17,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-05-28 00:43:17,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:18,157 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:19,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:19,095 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-28 00:43:19,095 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:19,095 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-28 00:43:19,095 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:19,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:19,098 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:19,100 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:19,100 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:19,103 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:19,109 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-05-28 00:43:19,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-05-28 00:43:19,909 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-05-28 00:43:20,266 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-28 00:43:20,266 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-05-28 00:43:20,270 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-05-28 00:43:20,609 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-28 00:43:20,609 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-05-28 00:43:20,613 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-05-28 00:43:20,947 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-28 00:43:20,947 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-05-28 00:43:20,950 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:20,950 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:20,951 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:20,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-28 00:43:20,956 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:20,958 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-28 00:43:20,970 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-05-28 00:43:20,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-05-28 00:43:20,970 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-28 00:43:20,970 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-28 00:43:20,970 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:43:20,971 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:43:20,973 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-28 00:43:20,977 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-28 00:43:21,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:21,184 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-28 00:43:21,187 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-28 00:43:21,190 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-05-28 00:43:21,192 [ scc.config] DEBUG Found github.token 2026-05-28 00:43:21,192 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-05-28 00:43:21,192 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-28 00:43:21,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:21,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-28 00:43:21,211 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-28 00:43:21,211 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-28 00:43:21,211 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-05-28 00:43:21,211 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:43:21,211 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:43:21,214 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-28 00:43:21,218 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-28 00:43:21,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:21,631 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-28 00:43:21,635 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-28 00:43:21,637 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-05-28 00:43:21,639 [ scc.config] DEBUG Found github.token 2026-05-28 00:43:21,639 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-05-28 00:43:21,639 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-28 00:43:21,641 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:21,643 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-28 00:43:21,651 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:21,655 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-05-28 00:43:21,655 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-05-28 00:43:22,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:22,075 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:22,111 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:22,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:22,113 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:22,147 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:22,151 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819d8950> has no local changes 2026-05-28 00:43:22,151 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:22,156 [ scc.git] DEBUG [detached HEAD 96ca80e] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:22,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:22,157 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:22,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-05-28 00:43:23,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-05-28 00:43:23,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:24,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:24,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:25,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:25,210 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:43:25,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-05-28 00:43:25,687 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:43:26,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:26,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:27,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:27,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:27,853 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-28 00:43:28,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-05-28 00:43:28,362 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:43:28,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:29,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:30,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:30,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:30,669 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-28 00:43:31,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-05-28 00:43:31,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-05-28 00:43:32,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-05-28 00:43:32,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-05-28 00:43:33,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-05-28 00:43:33,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-05-28 00:43:34,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-05-28 00:43:34,135 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:34,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-28 00:43:34,135 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:34,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:34,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:34,140 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:34,140 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:34,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:34,145 [ scc.git] DEBUG Already up to date. 2026-05-28 00:43:34,145 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-05-28 00:43:34,489 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-28 00:43:34,489 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-05-28 00:43:34,493 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-05-28 00:43:34,842 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-28 00:43:34,842 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-05-28 00:43:34,846 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-05-28 00:43:35,116 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-28 00:43:35,116 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-05-28 00:43:35,120 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:35,120 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:35,120 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:35,122 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-28 00:43:35,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:35,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-28 00:43:35,134 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:35,137 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-05-28 00:43:35,137 [ scc.git] DEBUG package.json | 2 +- 2026-05-28 00:43:35,137 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-05-28 00:43:35,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:35,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-05-28 00:43:35,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:35,334 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-05-28 00:43:35,343 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-28 00:43:35,343 [ scc.git] DEBUG Auto-merging package.json 2026-05-28 00:43:35,343 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:35,346 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-05-28 00:43:35,346 [ scc.git] DEBUG package.json | 2 +- 2026-05-28 00:43:35,346 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-05-28 00:43:35,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:35,767 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-28 00:43:35,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:35,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-28 00:43:35,779 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:35,781 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:43:35,781 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:43:36,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:36,201 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:36,236 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:36,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:36,238 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:36,274 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:36,278 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819dae10> has no local changes 2026-05-28 00:43:36,278 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:36,284 [ scc.git] DEBUG [detached HEAD 7bec694] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:36,284 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:36,284 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:36,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-05-28 00:43:37,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-05-28 00:43:37,246 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:43:37,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:38,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:38,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:43:39,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:39,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:39,920 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:43:39,921 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:39,921 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-28 00:43:39,921 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:39,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:39,923 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:39,925 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:39,925 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:39,928 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:39,930 [ scc.git] DEBUG Already up to date. 2026-05-28 00:43:39,930 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-05-28 00:43:40,271 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-05-28 00:43:40,271 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-05-28 00:43:40,275 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:40,275 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:40,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:40,277 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-28 00:43:40,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:40,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-28 00:43:40,287 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:40,290 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:43:40,290 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:43:40,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:40,465 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:40,502 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:40,502 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:40,504 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:40,539 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:40,542 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819e8710> has no local changes 2026-05-28 00:43:40,542 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:40,548 [ scc.git] DEBUG [detached HEAD 204bbf2] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:40,548 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:40,548 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:41,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-05-28 00:43:41,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-05-28 00:43:41,524 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:41,524 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-28 00:43:41,524 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:41,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:41,526 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:41,528 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:41,528 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:41,531 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:41,538 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-05-28 00:43:42,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-05-28 00:43:43,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-05-28 00:43:43,006 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:43,006 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:43,007 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:43,009 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:43,044 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:43,044 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:43,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:43,081 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:43,084 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819fe950> has no local changes 2026-05-28 00:43:43,084 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:43,089 [ scc.git] DEBUG [detached HEAD 60691ab] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:43,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:43,090 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:43,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-05-28 00:43:44,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-05-28 00:43:44,097 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:43:44,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:45,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:45,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:43:46,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:46,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:46,789 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:43:47,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-05-28 00:43:47,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-05-28 00:43:48,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:48,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:49,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:49,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:49,827 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-28 00:43:49,827 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:49,828 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-28 00:43:49,828 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:49,828 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:49,830 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:49,832 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:49,832 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:49,834 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:49,837 [ scc.git] DEBUG Already up to date. 2026-05-28 00:43:49,837 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-28 00:43:50,213 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-28 00:43:50,213 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-28 00:43:50,217 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-28 00:43:50,544 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-28 00:43:50,544 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-28 00:43:50,548 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:50,548 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:50,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:50,550 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-28 00:43:50,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:50,555 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-28 00:43:50,562 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG Auto-merging setup.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-05-28 00:43:50,563 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:43:50,563 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:43:50,565 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-28 00:43:50,569 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-05-28 00:43:50,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:50,753 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-28 00:43:50,756 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-28 00:43:50,758 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - omero_signup/signup_settings.py - setup.py - omero_signup/urls.py --conflicts 2026-05-28 00:43:50,760 [ scc.config] DEBUG Found github.token 2026-05-28 00:43:50,760 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-05-28 00:43:50,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-28 00:43:50,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:50,764 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-28 00:43:50,771 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:50,773 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:43:50,773 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:43:51,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:51,194 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:51,231 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:51,232 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:51,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:51,268 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:51,271 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982bbeb10> has no local changes 2026-05-28 00:43:51,271 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:51,277 [ scc.git] DEBUG [detached HEAD b1f1d98] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:51,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:51,277 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:51,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-05-28 00:43:52,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-05-28 00:43:52,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-05-28 00:43:53,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-05-28 00:43:53,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:54,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:43:54,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-28 00:43:55,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:43:55,403 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-28 00:43:55,404 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:43:55,404 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-28 00:43:55,404 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:55,404 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:55,406 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:43:55,408 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:43:55,408 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:43:55,411 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:43:55,417 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-05-28 00:43:56,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-05-28 00:43:56,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-05-28 00:43:57,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-05-28 00:43:57,528 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-28 00:43:57,919 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-05-28 00:43:57,919 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-28 00:43:57,923 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:43:57,923 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:57,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:57,925 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-05-28 00:43:57,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:57,930 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-05-28 00:43:57,936 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-05-28 00:43:57,937 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:43:57,940 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-05-28 00:43:57,940 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-05-28 00:43:57,940 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-05-28 00:43:57,940 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-05-28 00:43:57,940 [ scc.git] DEBUG ms/test | 2 ++ 2026-05-28 00:43:57,940 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-05-28 00:43:57,940 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-05-28 00:43:57,940 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-05-28 00:43:57,940 [ scc.git] DEBUG create mode 100755 ms/test 2026-05-28 00:43:58,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:43:58,127 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:43:58,164 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:43:58,165 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:43:58,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:43:58,202 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:43:58,205 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819d3490> has no local changes 2026-05-28 00:43:58,205 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:43:58,211 [ scc.git] DEBUG [detached HEAD fe9f375] merge master -Dorg -Ssuccess-only 2026-05-28 00:43:58,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:43:58,211 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:43:58,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-05-28 00:43:59,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-05-28 00:43:59,330 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:43:59,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:00,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:01,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:44:01,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:01,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:01,971 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:01,971 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:01,971 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-28 00:44:01,971 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:01,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:01,973 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:44:01,975 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:01,975 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:44:01,978 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:44:01,981 [ scc.git] DEBUG Already up to date. 2026-05-28 00:44:01,981 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-28 00:44:02,272 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-05-28 00:44:02,272 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-28 00:44:02,276 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:02,276 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:02,276 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:02,278 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-28 00:44:02,280 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:02,282 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-28 00:44:02,288 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:44:02,291 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:44:02,291 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:44:02,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:02,484 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:02,520 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:02,520 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:02,522 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:02,557 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:02,560 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981a1f650> has no local changes 2026-05-28 00:44:02,560 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:02,565 [ scc.git] DEBUG [detached HEAD 22f2414] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:02,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:02,565 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:03,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-05-28 00:44:03,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-05-28 00:44:03,690 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:44:04,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:04,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:05,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:44:06,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:06,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:06,455 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:06,455 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:06,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-28 00:44:06,455 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:06,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:06,457 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:44:06,459 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:06,459 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:44:06,462 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:44:06,468 [ scc.git] DEBUG Updating deab817..160d894 2026-05-28 00:44:07,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-05-28 00:44:07,180 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-28 00:44:07,529 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-05-28 00:44:07,529 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-28 00:44:07,533 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:07,533 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:07,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:07,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-28 00:44:07,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:07,540 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-28 00:44:07,546 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:44:07,548 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:44:07,548 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:44:07,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:07,742 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:07,779 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:07,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:07,781 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:07,817 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:07,820 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981a42550> has no local changes 2026-05-28 00:44:07,820 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:07,826 [ scc.git] DEBUG [detached HEAD d1940c0] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:07,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:07,826 [ scc.git] INFO Overriding base-branch from master to main 2026-05-28 00:44:07,826 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:08,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-05-28 00:44:08,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-05-28 00:44:09,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-05-28 00:44:10,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:10,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:11,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:44:11,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:12,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:12,074 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-05-28 00:44:12,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-05-28 00:44:13,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-05-28 00:44:13,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-05-28 00:44:14,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:14,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:15,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:15,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:15,606 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-28 00:44:15,607 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:15,607 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-28 00:44:15,607 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:15,607 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:15,609 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-05-28 00:44:15,611 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:15,611 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-05-28 00:44:15,614 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-05-28 00:44:15,620 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-05-28 00:44:16,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-05-28 00:44:17,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-05-28 00:44:17,229 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-05-28 00:44:17,520 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-28 00:44:17,520 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-05-28 00:44:17,524 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-05-28 00:44:17,868 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-28 00:44:17,868 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-05-28 00:44:17,871 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:17,871 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:17,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:17,874 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-28 00:44:17,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:17,878 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-28 00:44:17,885 [ scc.git] DEBUG Auto-merging README.rst 2026-05-28 00:44:17,885 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-05-28 00:44:17,885 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-05-28 00:44:17,885 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-28 00:44:17,885 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-28 00:44:17,885 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-28 00:44:17,888 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-28 00:44:17,891 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-28 00:44:18,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:18,108 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-28 00:44:18,110 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-28 00:44:18,113 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#155](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-05-28 00:44:18,115 [ scc.config] DEBUG Found github.token 2026-05-28 00:44:18,115 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-05-28 00:44:18,115 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-28 00:44:18,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:18,119 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-28 00:44:18,126 [ scc.git] DEBUG Auto-merging README.rst 2026-05-28 00:44:18,126 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-28 00:44:18,127 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:44:18,130 [ scc.git] DEBUG README.rst | 3 + 2026-05-28 00:44:18,130 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-05-28 00:44:18,130 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-05-28 00:44:18,130 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-05-28 00:44:18,130 [ scc.git] DEBUG setup.py | 5 +- 2026-05-28 00:44:18,130 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-05-28 00:44:18,130 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-05-28 00:44:18,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:18,561 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:18,599 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:18,599 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:18,601 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:18,637 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:18,641 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981a19110> has no local changes 2026-05-28 00:44:18,641 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:18,646 [ scc.git] DEBUG [detached HEAD 2ceebf3] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:18,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:18,647 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:19,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-05-28 00:44:19,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-05-28 00:44:19,623 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:44:20,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:20,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:21,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:44:21,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:22,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:22,342 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:22,342 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:22,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-28 00:44:22,342 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:22,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:22,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:44:22,347 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:22,347 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:44:22,349 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:44:22,352 [ scc.git] DEBUG Already up to date. 2026-05-28 00:44:22,352 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-05-28 00:44:22,658 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-05-28 00:44:22,658 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-05-28 00:44:22,662 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:22,662 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:22,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:22,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-28 00:44:22,667 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:22,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-28 00:44:22,675 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:44:22,677 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:44:22,677 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:44:22,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:22,891 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:22,928 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:22,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:22,930 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:22,966 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:22,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981a795d0> has no local changes 2026-05-28 00:44:22,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:22,974 [ scc.git] DEBUG [detached HEAD 9de6757] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:22,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:22,975 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:23,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-05-28 00:44:23,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-05-28 00:44:23,956 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-28 00:44:24,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:25,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-28 00:44:25,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-28 00:44:26,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-28 00:44:26,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-05-28 00:44:26,590 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:26,591 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:26,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-28 00:44:26,591 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:26,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:26,593 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:44:26,595 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:26,595 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:44:26,598 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:44:26,601 [ scc.git] DEBUG Already up to date. 2026-05-28 00:44:26,601 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-05-28 00:44:26,950 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-05-28 00:44:26,950 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-05-28 00:44:26,954 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:26,954 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:26,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:26,956 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-28 00:44:26,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:26,961 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-28 00:44:26,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-28 00:44:26,969 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-28 00:44:26,969 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-28 00:44:27,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:27,170 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:27,207 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:27,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:27,209 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:27,245 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:27,249 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982bbfa90> has no local changes 2026-05-28 00:44:27,249 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:27,254 [ scc.git] DEBUG [detached HEAD 7d5bbaa] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:27,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:27,255 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:27,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-05-28 00:44:27,663 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:27,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-28 00:44:27,663 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:27,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:27,665 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-28 00:44:27,667 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:27,667 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-28 00:44:27,669 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-28 00:44:27,672 [ scc.git] DEBUG Already up to date. 2026-05-28 00:44:27,672 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:27,672 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:27,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:27,674 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:27,712 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:27,712 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:27,715 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:27,750 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:27,753 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f39819991d0> has no local changes 2026-05-28 00:44:27,753 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:27,759 [ scc.git] DEBUG [detached HEAD 4751e23] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:27,759 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:27,759 [ scc.git] INFO Overriding base-branch from master to develop 2026-05-28 00:44:27,759 [ scc.repo] DEBUG ## PRs found: 2026-05-28 00:44:28,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-05-28 00:44:28,135 [ scc.repo] DEBUG ## Branches found: 2026-05-28 00:44:28,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-28 00:44:28,135 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:28,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:28,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-05-28 00:44:28,139 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-28 00:44:28,139 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-05-28 00:44:28,142 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-05-28 00:44:28,153 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-05-28 00:44:28,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-05-28 00:44:29,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-05-28 00:44:30,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-05-28 00:44:30,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-05-28 00:44:31,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-05-28 00:44:32,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-05-28 00:44:32,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-05-28 00:44:32,960 [ scc.git] DEBUG ## Unique users: [] 2026-05-28 00:44:32,960 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:32,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:32,963 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-28 00:44:33,000 [ scc.git] DEBUG Get sha1 of %s 2026-05-28 00:44:33,000 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-28 00:44:33,002 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:33,038 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:33,042 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3981a04e90> has no local changes 2026-05-28 00:44:33,042 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:33,048 [ scc.git] DEBUG [detached HEAD bf46c24] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:33,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:33,048 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-28 00:44:33,120 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-05-28 00:44:33,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:33,420 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-05-28 00:44:33,422 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-05-28 00:44:33,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:33,853 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-05-28 00:44:33,855 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-05-28 00:44:34,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:34,294 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-05-28 00:44:34,296 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-05-28 00:44:34,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:34,728 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-05-28 00:44:35,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:35,167 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-05-28 00:44:35,168 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-05-28 00:44:35,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:35,762 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-05-28 00:44:35,764 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-05-28 00:44:36,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:36,214 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-05-28 00:44:36,216 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-05-28 00:44:36,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:36,659 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-05-28 00:44:36,660 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-05-28 00:44:37,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:37,089 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-05-28 00:44:37,091 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-05-28 00:44:37,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:37,534 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-05-28 00:44:37,536 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-05-28 00:44:37,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:37,966 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-05-28 00:44:37,968 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-05-28 00:44:38,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:38,423 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-05-28 00:44:38,425 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-05-28 00:44:38,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:38,858 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-05-28 00:44:39,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:39,295 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-05-28 00:44:39,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:39,731 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-05-28 00:44:39,732 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-05-28 00:44:40,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:40,174 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-05-28 00:44:40,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:40,615 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-05-28 00:44:41,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:41,043 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-05-28 00:44:41,045 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-05-28 00:44:41,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:41,479 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-05-28 00:44:41,480 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-05-28 00:44:41,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:41,915 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-05-28 00:44:41,916 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-05-28 00:44:42,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:42,346 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-05-28 00:44:42,348 [ scc.config] DEBUG Found submodule.scripts.url 2026-05-28 00:44:42,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-28 00:44:42,786 [ scc.config] DEBUG Found submodule.scripts.branch 2026-05-28 00:44:42,786 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-28 00:44:42,860 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3982b9d950> has local changes 2026-05-28 00:44:42,860 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 196 will-moore 'Storage options only if needed' (status: failure) - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Updating 9cc36cde..e68b3e14 Previously merged: - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 532 will-moore 'Zarr layers' (stage: draft) - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) Updating 7a798ce..3b7bb10 Previously merged: - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' - PR 529 will-moore 'Image id and roi id initial params' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 227 will-moore 'Vectortile investigation' - PR 471 will-moore 'Z projection disabled tooltip' - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' - PR 535 dependabot[bot] 'Bump tmp and eslint' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#155 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/155/)' 2026-05-28 00:44:42,871 [ scc.git] DEBUG [detached HEAD 6a8cf20] merge master -Dorg -Ssuccess-only 2026-05-28 00:44:42,871 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-05-28 00:44:42,872 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-28 00:44:42,872 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-05-28 00:44:42,872 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-05-28 00:44:42,872 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-05-28 00:44:42,872 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-05-28 00:44:42,872 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-05-28 00:44:42,872 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-05-28 00:44:42,872 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-05-28 00:44:42,872 [ scc.merge] INFO 2026-05-28 00:44:42,872 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-05-28 00:44:42,872 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 196 will-moore 'Storage options only if needed' (status: failure) 2026-05-28 00:44:42,872 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-05-28 00:44:42,873 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-05-28 00:44:42,873 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,873 [ scc.merge] INFO 2026-05-28 00:44:42,873 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-05-28 00:44:42,873 [ scc.merge] INFO 2026-05-28 00:44:42,873 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-28 00:44:42,873 [ scc.merge] INFO 2026-05-28 00:44:42,873 [ scc.merge] INFO Repository: ome/omero-figure 2026-05-28 00:44:42,873 [ scc.merge] INFO Updating 9cc36cde..e68b3e14 2026-05-28 00:44:42,873 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 690 dependabot[bot] 'Bump postcss from 8.5.3 to 8.5.15' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-05-28 00:44:42,873 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,874 [ scc.merge] INFO 2026-05-28 00:44:42,874 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-28 00:44:42,874 [ scc.merge] INFO 2026-05-28 00:44:42,874 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-05-28 00:44:42,874 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,874 [ scc.merge] INFO 2026-05-28 00:44:42,874 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,874 [ scc.merge] INFO 2026-05-28 00:44:42,874 [ scc.merge] INFO Repository: ome/omero-gallery 2026-05-28 00:44:42,874 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,874 [ scc.merge] INFO 2026-05-28 00:44:42,874 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-28 00:44:42,874 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-28 00:44:42,875 [ scc.merge] INFO 2026-05-28 00:44:42,875 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-28 00:44:42,875 [ scc.merge] INFO 2026-05-28 00:44:42,875 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-05-28 00:44:42,875 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 532 will-moore 'Zarr layers' (stage: draft) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-05-28 00:44:42,875 [ scc.merge] INFO Updating 7a798ce..3b7bb10 2026-05-28 00:44:42,875 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 533 dependabot[bot] 'Bump ws, engine.io and socket.io-adapter' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 530 dependabot[bot] 'Bump webpack-dev-server from 4.13.2 to 5.2.4' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 528 dependabot[bot] 'Bump fast-uri from 3.1.0 to 3.1.2' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 529 will-moore 'Image id and roi id initial params' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,875 [ scc.merge] INFO 2026-05-28 00:44:42,875 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 527 PollenGeo 'Add grid overlay feature with configurable cell size and labels' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 534 will-moore 'Fix settings.md link to master branch. Move iviewer redirect settings' 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 535 dependabot[bot] 'Bump tmp and eslint' 2026-05-28 00:44:42,875 [ scc.merge] INFO 2026-05-28 00:44:42,875 [ scc.merge] INFO Repository: ome/omero-mapr 2026-05-28 00:44:42,875 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,875 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-05-28 00:44:42,876 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Repository: ome/omero-metadata 2026-05-28 00:44:42,876 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-05-28 00:44:42,876 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Repository: ome/omero-parade 2026-05-28 00:44:42,876 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-05-28 00:44:42,876 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-05-28 00:44:42,876 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO Repository: ome/omero-rois 2026-05-28 00:44:42,876 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-28 00:44:42,876 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-05-28 00:44:42,876 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-05-28 00:44:42,876 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,876 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: ome/omero-signup 2026-05-28 00:44:42,877 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-05-28 00:44:42,877 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-05-28 00:44:42,877 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-05-28 00:44:42,877 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: ome/omero-upload 2026-05-28 00:44:42,877 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-05-28 00:44:42,877 [ scc.merge] INFO Updating deab817..160d894 2026-05-28 00:44:42,877 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-05-28 00:44:42,877 [ scc.merge] INFO Excluded PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-05-28 00:44:42,877 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-05-28 00:44:42,877 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-28 00:44:42,877 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-28 00:44:42,877 [ scc.merge] INFO 2026-05-28 00:44:42,877 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-05-28 00:44:42,878 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-05-28 00:44:42,878 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO Merged PRs: 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-05-28 00:44:42,878 [ scc.merge] INFO Already up to date. 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO Repository: ome/scripts 2026-05-28 00:44:42,878 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-05-28 00:44:42,878 [ scc.merge] INFO Previously merged: 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-05-28 00:44:42,878 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] INFO 2026-05-28 00:44:42,878 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-28 00:44:42,878 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-28 00:44:42,880 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,882 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-28 00:44:42,882 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-28 00:44:42,884 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,886 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-28 00:44:42,886 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-28 00:44:42,888 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,890 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-28 00:44:42,890 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,892 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-28 00:44:42,892 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-28 00:44:42,894 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,896 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-28 00:44:42,896 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-28 00:44:42,898 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,900 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-28 00:44:42,900 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-28 00:44:42,902 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-28 00:44:42,905 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,907 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-28 00:44:42,907 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,909 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-28 00:44:42,909 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,912 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-28 00:44:42,912 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-28 00:44:42,914 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,916 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-28 00:44:42,916 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-28 00:44:42,918 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-28 00:44:42,920 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-28 00:44:42,922 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-28 00:44:42,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-28 00:44:42,924 [ scc.git] DEBUG Calling 'git remote' 2026-05-28 00:44:42,926 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.11.1-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 167f0c0] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 4ad99d3] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-28 00:45:32,184 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-28 00:45:42,408 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-28 00:45:45,150 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-28 00:45:50,231 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-28 00:46:38,384 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS