Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-11-09 17:53:22,239 [ scc.config] DEBUG Found github.token
2026-11-09 17:53:22,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-11-09 17:53:22,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:22,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:23,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-11-09 17:53:23,458 [ scc.gh] DEBUG 4960 remaining from 5000 (Reset at 18:11
2026-11-09 17:53:23,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:23,467 [ scc.git] DEBUG Check current status
2026-11-09 17:53:23,467 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:23,484 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-09 17:53:23,485 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:23,605 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-11-09 17:53:23,634 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-11-09 17:53:23,686 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-11-09 17:53:23,717 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-09 17:53:23,758 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-11-09 17:53:23,765 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:24,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-11-09 17:53:24,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:25,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:25,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:26,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:26,238 [ scc.git] DEBUG Resetting...
2026-11-09 17:53:26,238 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-11-09 17:53:26,361 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-09 17:53:26,362 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-11-09 17:53:26,661 [ scc.git] DEBUG Check current status
2026-11-09 17:53:26,661 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:26,674 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-09 17:53:26,675 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:26,797 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-11-09 17:53:26,824 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-11-09 17:53:26,868 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-11-09 17:53:26,898 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-09 17:53:26,933 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-11-09 17:53:26,934 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-11-09 17:53:26,934 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-11-09 17:53:26,934 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-11-09 17:53:26,934 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-11-09 17:53:26,934 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-11-09 17:53:26,934 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:53:27,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-11-09 17:53:27,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-11-09 17:53:27,898 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:53:27,898 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-09 17:53:28,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-11-09 17:53:28,497 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:53:28,497 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-09 17:53:29,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-11-09 17:53:29,083 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:53:29,083 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-09 17:53:29,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-11-09 17:53:29,696 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:53:29,696 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-09 17:53:29,696 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:53:29,696 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:53:29,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:29,851 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:53:30,288 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:53:30,485 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:53:30,712 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:53:30,751 [ scc.git] DEBUG Already up to date.
2026-11-09 17:53:30,751 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-11-09 17:53:31,208 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:53:31,208 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-11-09 17:53:31,232 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-11-09 17:53:31,824 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:53:31,824 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-11-09 17:53:31,847 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-11-09 17:53:32,309 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:53:32,309 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-11-09 17:53:32,329 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-11-09 17:53:32,803 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:53:32,803 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-11-09 17:53:32,821 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:53:32,821 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:53:32,821 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:32,829 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-09 17:53:32,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:32,851 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-09 17:53:33,038 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:53:33,102 [ scc.git] DEBUG omero-marshal | 2 +-
2026-11-09 17:53:33,103 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-09 17:53:33,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:33,328 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-09 17:53:33,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:33,359 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-09 17:53:33,593 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:53:33,632 [ scc.git] DEBUG omero-web | 2 +-
2026-11-09 17:53:33,632 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-09 17:53:33,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:33,865 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-09 17:53:33,883 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:33,890 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-09 17:53:34,090 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:53:34,134 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-11-09 17:53:34,135 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-09 17:53:34,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:34,362 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-09 17:53:34,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:34,392 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-09 17:53:34,598 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:53:34,648 [ scc.git] DEBUG omero-py | 2 +-
2026-11-09 17:53:34,648 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-09 17:53:34,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:34,868 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:53:35,120 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-11-09 17:53:35,293 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-11-09 17:53:35,657 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-11-09 17:53:36,183 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-11-09 17:53:36,184 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:53:36,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:53:36,193 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:53:36,678 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8e42923d90> has no local changes
2026-11-09 17:53:36,678 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:53:37,013 [ scc.git] DEBUG [detached HEAD 814dd41] merge master -Dorg -Snone
2026-11-09 17:53:37,014 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-11-09 17:53:37,014 [ scc.merge] INFO Already up to date.
2026-11-09 17:53:37,015 [ scc.merge] INFO
2026-11-09 17:53:37,015 [ scc.merge] INFO Merged PRs:
2026-11-09 17:53:37,015 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-09 17:53:37,015 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-09 17:53:37,015 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-09 17:53:37,015 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-09 17:53:37,015 [ scc.merge] INFO
2026-11-09 17:53:37,015 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-11-09 17:53:37,015 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '636540edd446910373ee2f91100356497e205722'
Submodule path 'omero-web': checked out 'e19117680c1d814c7f196190dd0cd3d45fbc0ca6'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-11-09 17:53:43,289 [ scc.config] DEBUG Found github.token
2026-11-09 17:53:43,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-11-09 17:53:43,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:44,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:53:44,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-11-09 17:53:44,527 [ scc.gh] DEBUG 4944 remaining from 5000 (Reset at 18:11
2026-11-09 17:53:44,528 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:44,538 [ scc.git] DEBUG Check current status
2026-11-09 17:53:44,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:44,556 [ scc.git] DEBUG 814dd41 merge master -Dorg -Snone
2026-11-09 17:53:44,556 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:44,696 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-11-09 17:53:44,725 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-11-09 17:53:44,806 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-11-09 17:53:44,863 [ scc.git] DEBUG +636540edd446910373ee2f91100356497e205722 omero-scripts (v5.10.0-14-g636540e)
2026-11-09 17:53:44,901 [ scc.git] DEBUG +e19117680c1d814c7f196190dd0cd3d45fbc0ca6 omero-web (v5.33.3-1-ge19117680)
2026-11-09 17:53:44,925 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:44,925 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-11-09 17:53:44,928 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-11-09 17:53:45,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-11-09 17:53:45,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:46,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:46,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:47,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:47,286 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:53:47,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-09 17:53:47,389 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:47,402 [ scc.git] DEBUG Check current status
2026-11-09 17:53:47,402 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:47,417 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-11-09 17:53:47,417 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:47,529 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:47,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-11-09 17:53:48,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:48,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:49,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:49,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:49,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:53:50,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:53:50,068 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-09 17:53:50,068 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:50,078 [ scc.git] DEBUG Check current status
2026-11-09 17:53:50,079 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:50,095 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-11-09 17:53:50,096 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:50,202 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:50,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-11-09 17:53:51,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:51,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:52,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:52,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:52,606 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:53:52,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:53:52,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-09 17:53:52,702 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:52,712 [ scc.git] DEBUG Check current status
2026-11-09 17:53:52,712 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:52,734 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-11-09 17:53:52,737 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:52,843 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:53,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-11-09 17:53:53,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:54,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:54,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:55,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:55,437 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:53:55,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:53:55,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-09 17:53:55,541 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:55,552 [ scc.git] DEBUG Check current status
2026-11-09 17:53:55,552 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:55,572 [ scc.git] DEBUG 636540e Merge pull request #235 from will-moore/batch_roi_export_tags
2026-11-09 17:53:55,573 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:55,687 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:55,687 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-11-09 17:53:56,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-11-09 17:53:56,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:57,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:53:57,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:53:58,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:53:58,118 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:53:58,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:53:58,224 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-09 17:53:58,224 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-09 17:53:58,234 [ scc.git] DEBUG Check current status
2026-11-09 17:53:58,234 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:53:58,253 [ scc.git] DEBUG e19117680 Bump version: 5.33.3 → 5.33.4.dev0
2026-11-09 17:53:58,254 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:53:58,356 [ scc.config] DEBUG Found remote.origin.url
2026-11-09 17:53:58,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-11-09 17:53:59,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-09 17:53:59,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-09 17:54:00,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-09 17:54:00,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-09 17:54:00,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:54:00,925 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:54:00,925 [ scc.git] DEBUG Resetting...
2026-11-09 17:54:00,925 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-11-09 17:54:01,045 [ scc.git] DEBUG HEAD is now at 814dd41 merge master -Dorg -Snone
2026-11-09 17:54:01,046 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-11-09 17:54:01,385 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-11-09 17:54:01,759 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-11-09 17:54:02,061 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-11-09 17:54:02,787 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-11-09 17:54:02,804 [ scc.git] DEBUG Check current status
2026-11-09 17:54:02,805 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-09 17:54:02,819 [ scc.git] DEBUG 814dd41 merge master -Dorg -Snone
2026-11-09 17:54:02,820 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-09 17:54:02,926 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-11-09 17:54:02,949 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-11-09 17:54:02,985 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-11-09 17:54:03,012 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-09 17:54:03,041 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-11-09 17:54:03,042 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-11-09 17:54:03,042 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-11-09 17:54:03,042 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-11-09 17:54:03,042 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-11-09 17:54:03,042 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-11-09 17:54:03,042 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-11-09 17:54:03,043 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:03,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-11-09 17:54:04,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-11-09 17:54:04,353 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:54:05,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:05,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:06,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:06,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:06,712 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-09 17:54:07,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-11-09 17:54:07,274 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:54:07,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:08,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:08,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:09,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:09,503 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-09 17:54:10,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-11-09 17:54:10,091 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:54:10,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:11,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:11,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:12,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:12,488 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-09 17:54:13,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-11-09 17:54:13,050 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-09 17:54:13,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:14,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:14,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:15,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:15,390 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-09 17:54:15,390 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:54:15,390 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:15,390 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:15,399 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:54:15,408 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:54:15,408 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:54:15,424 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:54:15,465 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:15,465 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-11-09 17:54:15,938 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:54:15,938 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-11-09 17:54:15,971 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-11-09 17:54:16,399 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:54:16,400 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-11-09 17:54:16,420 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-11-09 17:54:16,985 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:54:16,985 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-11-09 17:54:17,011 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-11-09 17:54:17,470 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-09 17:54:17,470 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-11-09 17:54:17,491 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:54:17,491 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:17,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:17,500 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-09 17:54:17,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:17,526 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-09 17:54:17,564 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:17,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:17,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-09 17:54:17,824 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:17,834 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-09 17:54:17,888 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:18,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:18,279 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-09 17:54:18,304 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:18,314 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-09 17:54:18,370 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:18,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:18,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-09 17:54:18,786 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:18,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-09 17:54:18,851 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:19,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:19,226 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:54:19,458 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:19,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:19,467 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:19,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-11-09 17:54:19,761 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:54:19,761 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-09 17:54:19,762 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:19,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:19,777 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:54:19,794 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:54:19,794 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:54:19,813 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:54:19,865 [ scc.git] DEBUG Already up to date.
2026-11-09 17:54:19,865 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:54:19,865 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:19,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:19,880 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:54:20,002 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:20,002 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:20,015 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:54:20,131 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:54:20,194 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b03b2810> has no local changes
2026-11-09 17:54:20,194 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:54:20,305 [ scc.git] DEBUG [detached HEAD f902def] merge master -Dorg -Ssuccess-only
2026-11-09 17:54:20,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:54:20,307 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:20,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-11-09 17:54:21,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-11-09 17:54:21,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-11-09 17:54:22,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-11-09 17:54:22,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-11-09 17:54:23,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-11-09 17:54:24,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-11-09 17:54:24,062 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:54:24,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-09 17:54:24,062 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:24,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:24,078 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:54:24,092 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:54:24,092 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:54:24,138 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:54:24,345 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-11-09 17:54:24,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 16751
2026-11-09 17:54:25,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 16795
2026-11-09 17:54:26,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 18914
2026-11-09 17:54:26,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 17870
2026-11-09 17:54:26,770 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:54:26,770 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:26,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:26,794 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:54:26,936 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:26,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:26,954 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:54:27,077 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:54:27,166 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b03b1810> has no local changes
2026-11-09 17:54:27,166 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:54:27,304 [ scc.git] DEBUG [detached HEAD 93077f5] merge master -Dorg -Ssuccess-only
2026-11-09 17:54:27,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:54:27,307 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:27,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-11-09 17:54:28,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-11-09 17:54:28,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-11-09 17:54:29,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-11-09 17:54:30,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-11-09 17:54:30,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:31,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:31,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:54:32,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:32,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:33,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:33,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-11-09 17:54:33,933 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-11-09 17:54:34,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-11-09 17:54:35,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-11-09 17:54:35,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:36,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:36,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:37,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:37,312 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-11-09 17:54:37,312 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:54:37,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-09 17:54:37,313 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:37,313 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:37,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:54:37,338 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:54:37,338 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:54:37,375 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:54:37,789 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-11-09 17:54:38,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 19705
2026-11-09 17:54:38,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 16729
2026-11-09 17:54:39,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 18345
2026-11-09 17:54:40,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 17681
2026-11-09 17:54:40,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 19338
2026-11-09 17:54:41,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 17694
2026-11-09 17:54:42,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 16270
2026-11-09 17:54:42,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 19630
2026-11-09 17:54:43,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 19226
2026-11-09 17:54:43,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 17037
2026-11-09 17:54:43,974 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-11-09 17:54:44,561 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-11-09 17:54:44,561 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-11-09 17:54:44,587 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-11-09 17:54:45,193 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-11-09 17:54:45,193 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-11-09 17:54:45,216 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:54:45,216 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:45,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:45,228 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-11-09 17:54:45,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:45,312 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-11-09 17:54:45,561 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-11-09 17:54:45,626 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:54:45,703 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-11-09 17:54:45,703 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-11-09 17:54:45,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:45,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-11-09 17:54:46,048 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:46,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-11-09 17:54:46,319 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-11-09 17:54:46,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:54:46,448 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-11-09 17:54:46,448 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-11-09 17:54:46,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:46,700 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:54:46,815 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:46,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:46,825 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:54:46,922 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:54:46,997 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b01f7d90> has no local changes
2026-11-09 17:54:46,997 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:54:47,139 [ scc.git] DEBUG [detached HEAD b4c09d6e] merge master -Dorg -Ssuccess-only
2026-11-09 17:54:47,144 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:54:47,144 [ scc.git] INFO Overriding base-branch from master to develop
2026-11-09 17:54:47,144 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:47,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-11-09 17:54:48,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-11-09 17:54:48,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:49,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:54:50,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:54:50,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:51,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-11-09 17:54:51,145 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-11-09 17:54:51,145 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:54:51,145 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-09 17:54:51,146 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:51,146 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:51,166 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-11-09 17:54:51,181 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:54:51,181 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-11-09 17:54:51,200 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-11-09 17:54:51,432 [ scc.git] DEBUG Updating 03b9116..636540e
2026-11-09 17:54:51,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/235 HTTP/1.1" 200 16917
2026-11-09 17:54:52,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 15981
2026-11-09 17:54:53,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 16955
2026-11-09 17:54:53,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 16867
2026-11-09 17:54:54,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 16558
2026-11-09 17:54:54,567 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-11-09 17:54:55,124 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-11-09 17:54:55,124 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-11-09 17:54:55,153 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:54:55,153 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:55,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:55,165 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-11-09 17:54:55,209 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:55,221 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-11-09 17:54:55,420 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:54:55,473 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-11-09 17:54:55,473 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-11-09 17:54:55,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:54:55,705 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:54:55,808 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:54:55,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:54:55,820 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:54:55,908 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:54:55,960 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b2bb5990> has no local changes
2026-11-09 17:54:55,960 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..636540e
Previously merged:
- PR 235 will-moore 'Batch roi export tags'
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:54:56,088 [ scc.git] DEBUG [detached HEAD ab24198] merge master -Dorg -Ssuccess-only
2026-11-09 17:54:56,089 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:54:56,090 [ scc.repo] DEBUG ## PRs found:
2026-11-09 17:54:56,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-11-09 17:54:57,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/696 HTTP/1.1" 200 None
2026-11-09 17:54:57,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-11-09 17:54:58,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-11-09 17:54:58,254 [ scc.repo] DEBUG # ... Include label: include
2026-11-09 17:54:59,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea?page=1 HTTP/1.1" 200 None
2026-11-09 17:54:59,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:00,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:55:00,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-11-09 17:55:01,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-11-09 17:55:01,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:02,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:03,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:55:03,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:04,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:04,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:05,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-11-09 17:55:05,331 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-11-09 17:55:05,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-11-09 17:55:06,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-11-09 17:55:07,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:08,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:08,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:55:09,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:09,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:10,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:10,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/status HTTP/1.1" 200 None
2026-11-09 17:55:10,961 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-11-09 17:55:11,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-11-09 17:55:12,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-11-09 17:55:12,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-11-09 17:55:13,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-11-09 17:55:13,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:14,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:15,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:55:15,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:16,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:16,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:17,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-11-09 17:55:17,319 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel code cleanup'
2026-11-09 17:55:17,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-11-09 17:55:18,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-11-09 17:55:19,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:19,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:20,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-09 17:55:20,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:21,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/786a4d628d8264251fb0b21da8b41a0564fcbc27?per_page=1 HTTP/1.1" 200 None
2026-11-09 17:55:21,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-09 17:55:22,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/status HTTP/1.1" 200 None
2026-11-09 17:55:22,338 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-11-09 17:55:22,338 [ scc.repo] DEBUG ## Branches found:
2026-11-09 17:55:22,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-09 17:55:22,339 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:55:22,339 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:22,356 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-09 17:55:22,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-09 17:55:22,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-09 17:55:22,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-09 17:55:23,686 [ scc.git] DEBUG Updating 675d57fd7..e19117680
2026-11-09 17:55:24,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/694 HTTP/1.1" 200 17569
2026-11-09 17:55:24,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/693 HTTP/1.1" 200 17567
2026-11-09 17:55:25,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 18804
2026-11-09 17:55:26,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 18414
2026-11-09 17:55:26,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 16436
2026-11-09 17:55:27,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 18441
2026-11-09 17:55:28,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 17419
2026-11-09 17:55:28,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 20596
2026-11-09 17:55:29,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 20247
2026-11-09 17:55:29,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 17478
2026-11-09 17:55:30,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 20393
2026-11-09 17:55:31,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 17859
2026-11-09 17:55:31,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 17478
2026-11-09 17:55:32,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 19633
2026-11-09 17:55:33,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 18266
2026-11-09 17:55:33,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 17586
2026-11-09 17:55:34,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 20046
2026-11-09 17:55:35,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 17922
2026-11-09 17:55:35,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 17710
2026-11-09 17:55:36,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 18308
2026-11-09 17:55:36,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 19115
2026-11-09 17:55:37,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 17985
2026-11-09 17:55:38,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 15980
2026-11-09 17:55:38,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 17438
2026-11-09 17:55:39,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 17482
2026-11-09 17:55:40,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 17558
2026-11-09 17:55:40,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 17704
2026-11-09 17:55:42,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 17472
2026-11-09 17:55:43,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 17212
2026-11-09 17:55:44,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 18744
2026-11-09 17:55:44,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 17664
2026-11-09 17:55:45,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 17224
2026-11-09 17:55:46,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 18805
2026-11-09 17:55:47,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 18510
2026-11-09 17:55:47,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 17952
2026-11-09 17:55:47,797 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-11-09 17:55:48,439 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-09 17:55:48,439 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-11-09 17:55:48,462 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-11-09 17:55:49,194 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-09 17:55:49,194 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-11-09 17:55:49,238 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-11-09 17:55:50,008 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-09 17:55:50,008 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-11-09 17:55:50,029 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-11-09 17:55:50,809 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-09 17:55:50,809 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-11-09 17:55:50,831 [ scc.git] DEBUG ## Unique users: []
2026-11-09 17:55:50,831 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:55:50,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:50,841 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...786a4d628d8264251fb0b21da8b41a0564fcbc27'
2026-11-09 17:55:50,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:50,938 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 786a4d628d8264251fb0b21da8b41a0564fcbc27'
2026-11-09 17:55:51,311 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/annotations/mapanns_underscore.html
2026-11-09 17:55:51,375 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:55:51,465 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-11-09 17:55:51,465 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/layout.css | 28 ++++-
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 90 ++++++++++++--
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 79 ++++++------
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../includes/metadata_general_file.html | 4 +-
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-11-09 17:55:51,465 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 29 +++--
2026-11-09 17:55:51,465 [ scc.git] DEBUG 13 files changed, 479 insertions(+), 83 deletions(-)
2026-11-09 17:55:51,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:51,699 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-11-09 17:55:51,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:51,795 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel code cleanup) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-11-09 17:55:52,115 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-11-09 17:55:52,115 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-11-09 17:55:52,170 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:55:52,242 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-11-09 17:55:52,243 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-11-09 17:55:52,243 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-11-09 17:55:52,243 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-11-09 17:55:52,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:52,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8c81a68a11c64c7c576e1bf0710e30c1baea3b65'
2026-11-09 17:55:52,569 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:52,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 8c81a68a11c64c7c576e1bf0710e30c1baea3b65'
2026-11-09 17:55:52,865 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:55:52,966 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-11-09 17:55:52,966 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-11-09 17:55:52,966 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 4 deletions(-)
2026-11-09 17:55:53,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:53,181 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-11-09 17:55:53,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:53,335 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-11-09 17:55:53,667 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-09 17:55:53,743 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-11-09 17:55:53,743 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-11-09 17:55:53,743 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-11-09 17:55:53,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:53,988 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-09 17:55:54,108 [ scc.git] DEBUG Get sha1 of %s
2026-11-09 17:55:54,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-09 17:55:54,121 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:55:54,225 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:55:54,355 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b02286d0> has no local changes
2026-11-09 17:55:54,356 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..e19117680
Previously merged:
- PR 694 knabar 'Fix exception when ann.ns is null'
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel code cleanup'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:55:54,529 [ scc.git] DEBUG [detached HEAD 79a23f62e] merge master -Dorg -Ssuccess-only
2026-11-09 17:55:54,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:55:54,532 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-09 17:55:54,648 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-11-09 17:55:54,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:54,906 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-11-09 17:55:55,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:55,380 [ scc.config] DEBUG Found submodule.omero-py.url
2026-11-09 17:55:55,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:55,840 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-11-09 17:55:56,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:56,306 [ scc.config] DEBUG Found submodule.omero-web.url
2026-11-09 17:55:56,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-09 17:55:56,776 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-09 17:55:57,298 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f53b2cb6f10> has local changes
2026-11-09 17:55:57,298 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..636540e
Previously merged:
- PR 235 will-moore 'Batch roi export tags'
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..e19117680
Previously merged:
- PR 694 knabar 'Fix exception when ann.ns is null'
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel code cleanup'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
Generated by OMERO-python-superbuild-push#109 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/109/)'
2026-11-09 17:55:57,504 [ scc.git] DEBUG [detached HEAD e8b3720] merge master -Dorg -Ssuccess-only
2026-11-09 17:55:57,504 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-11-09 17:55:57,505 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-11-09 17:55:57,505 [ scc.merge] INFO Already up to date.
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Merged PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-11-09 17:55:57,506 [ scc.merge] INFO Already up to date.
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Repository: ome/omero-marshal
2026-11-09 17:55:57,506 [ scc.merge] INFO Excluded PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-11-09 17:55:57,506 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-11-09 17:55:57,506 [ scc.merge] INFO Previously merged:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Repository: ome/omero-py
2026-11-09 17:55:57,506 [ scc.merge] INFO Excluded PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-11-09 17:55:57,506 [ scc.merge] INFO Updating b44120b5..8990768d
2026-11-09 17:55:57,506 [ scc.merge] INFO Previously merged:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Merged PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Repository: ome/omero-scripts
2026-11-09 17:55:57,506 [ scc.merge] INFO Updating 03b9116..636540e
2026-11-09 17:55:57,506 [ scc.merge] INFO Previously merged:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 235 will-moore 'Batch roi export tags'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Merged PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-11-09 17:55:57,506 [ scc.merge] INFO
2026-11-09 17:55:57,506 [ scc.merge] INFO Repository: ome/omero-web
2026-11-09 17:55:57,506 [ scc.merge] INFO Excluded PRs:
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
2026-11-09 17:55:57,506 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-11-09 17:55:57,506 [ scc.merge] INFO Updating 675d57fd7..e19117680
2026-11-09 17:55:57,506 [ scc.merge] INFO Previously merged:
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 694 knabar 'Fix exception when ann.ns is null'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-11-09 17:55:57,507 [ scc.merge] INFO
2026-11-09 17:55:57,507 [ scc.merge] INFO Merged PRs:
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 604 will-moore 'Right panel code cleanup'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-11-09 17:55:57,507 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-11-09 17:55:57,507 [ scc.merge] INFO
2026-11-09 17:55:57,507 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-11-09 17:55:57,507 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-09 17:55:57,538 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:55:57,563 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-09 17:55:57,563 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:55:57,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-09 17:55:57,576 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:55:57,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-09 17:55:57,588 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-09 17:55:57,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-09 17:55:57,599 [ scc.git] DEBUG Calling 'git remote'
2026-11-09 17:55:57,610 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-11-09 17:56:38,650 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
