Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-11-10 23:55:08,416 [ scc.config] DEBUG Found github.token
2026-11-10 23:55:08,418 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-11-10 23:55:08,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:09,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:09,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-11-10 23:55:09,589 [ scc.gh] DEBUG 4257 remaining from 5000 (Reset at 00:11
2026-11-10 23:55:09,590 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:09,599 [ scc.git] DEBUG Check current status
2026-11-10 23:55:09,599 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:09,617 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-10 23:55:09,618 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:09,764 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-11-10 23:55:09,811 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-11-10 23:55:09,884 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-11-10 23:55:09,918 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-10 23:55:09,961 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-11-10 23:55:09,970 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:10,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-11-10 23:55:10,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:11,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:12,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:12,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:12,470 [ scc.git] DEBUG Resetting...
2026-11-10 23:55:12,470 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-11-10 23:55:12,595 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-10 23:55:12,596 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-11-10 23:55:12,926 [ scc.git] DEBUG Check current status
2026-11-10 23:55:12,926 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:12,943 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-11-10 23:55:12,944 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:13,092 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-11-10 23:55:13,130 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-11-10 23:55:13,186 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-11-10 23:55:13,229 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-10 23:55:13,275 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-11-10 23:55:13,276 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-11-10 23:55:13,276 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-11-10 23:55:13,276 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-11-10 23:55:13,276 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-11-10 23:55:13,276 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-11-10 23:55:13,276 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:55:13,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-11-10 23:55:14,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-11-10 23:55:14,218 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:14,218 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-10 23:55:14,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-11-10 23:55:14,822 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:14,822 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-10 23:55:15,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-11-10 23:55:15,393 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:15,393 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-10 23:55:15,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-11-10 23:55:15,978 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:15,978 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-10 23:55:15,979 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:55:15,979 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:55:15,979 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:15,989 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:55:16,003 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:55:16,003 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:55:16,021 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:55:16,064 [ scc.git] DEBUG Already up to date.
2026-11-10 23:55:16,064 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-11-10 23:55:16,552 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:55:16,552 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-11-10 23:55:16,575 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-11-10 23:55:16,983 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:55:16,984 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-11-10 23:55:17,009 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-11-10 23:55:17,430 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:55:17,430 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-11-10 23:55:17,453 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-11-10 23:55:17,864 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:55:17,864 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-11-10 23:55:17,891 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:55:17,891 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:55:17,891 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:17,901 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-10 23:55:17,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:17,931 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-10 23:55:18,226 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:55:18,331 [ scc.git] DEBUG omero-marshal | 2 +-
2026-11-10 23:55:18,331 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-10 23:55:18,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:18,562 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-10 23:55:18,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:18,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-10 23:55:18,921 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:55:19,002 [ scc.git] DEBUG omero-web | 2 +-
2026-11-10 23:55:19,002 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-10 23:55:19,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:19,248 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-10 23:55:19,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:19,278 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-10 23:55:19,589 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:55:19,642 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-11-10 23:55:19,642 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-10 23:55:19,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:19,869 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-10 23:55:19,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:19,903 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-10 23:55:20,181 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:55:20,235 [ scc.git] DEBUG omero-py | 2 +-
2026-11-10 23:55:20,235 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-10 23:55:20,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:20,449 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:55:20,848 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-11-10 23:55:21,262 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-11-10 23:55:22,108 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-11-10 23:55:23,836 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-11-10 23:55:23,837 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:55:23,837 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:55:23,848 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:55:24,586 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb92e35d710> has no local changes
2026-11-10 23:55:24,586 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:55:25,009 [ scc.git] DEBUG [detached HEAD a73ce42] merge master -Dorg -Snone
2026-11-10 23:55:25,011 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-11-10 23:55:25,011 [ scc.merge] INFO Already up to date.
2026-11-10 23:55:25,011 [ scc.merge] INFO
2026-11-10 23:55:25,011 [ scc.merge] INFO Merged PRs:
2026-11-10 23:55:25,011 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-10 23:55:25,011 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-10 23:55:25,011 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-10 23:55:25,011 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-10 23:55:25,011 [ scc.merge] INFO
2026-11-10 23:55:25,011 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-11-10 23:55:25,011 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '636540edd446910373ee2f91100356497e205722'
Submodule path 'omero-web': checked out 'e19117680c1d814c7f196190dd0cd3d45fbc0ca6'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-11-10 23:55:31,212 [ scc.config] DEBUG Found github.token
2026-11-10 23:55:31,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-11-10 23:55:31,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:31,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:55:32,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-11-10 23:55:32,429 [ scc.gh] DEBUG 4241 remaining from 5000 (Reset at 00:11
2026-11-10 23:55:32,430 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:32,442 [ scc.git] DEBUG Check current status
2026-11-10 23:55:32,442 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:32,463 [ scc.git] DEBUG a73ce42 merge master -Dorg -Snone
2026-11-10 23:55:32,464 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:32,610 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-11-10 23:55:32,647 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-11-10 23:55:32,720 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-11-10 23:55:32,781 [ scc.git] DEBUG +636540edd446910373ee2f91100356497e205722 omero-scripts (v5.10.0-14-g636540e)
2026-11-10 23:55:32,828 [ scc.git] DEBUG +e19117680c1d814c7f196190dd0cd3d45fbc0ca6 omero-web (v5.33.3-1-ge19117680)
2026-11-10 23:55:32,840 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:32,840 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-11-10 23:55:32,843 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-11-10 23:55:33,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-11-10 23:55:33,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:34,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:34,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:35,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:35,176 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:35,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-10 23:55:35,283 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:35,294 [ scc.git] DEBUG Check current status
2026-11-10 23:55:35,294 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:35,310 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-11-10 23:55:35,311 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:35,422 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:35,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-11-10 23:55:36,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:36,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:37,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:37,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:37,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:37,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:55:37,973 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-10 23:55:37,973 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:37,985 [ scc.git] DEBUG Check current status
2026-11-10 23:55:37,985 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:38,004 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-11-10 23:55:38,005 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:38,131 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:38,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-11-10 23:55:38,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:39,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:40,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:40,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:40,491 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:40,601 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:55:40,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-10 23:55:40,602 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:40,614 [ scc.git] DEBUG Check current status
2026-11-10 23:55:40,614 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:40,642 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-11-10 23:55:40,646 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:40,784 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:41,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-11-10 23:55:41,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:42,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:42,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:43,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:43,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:43,281 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:55:43,282 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-10 23:55:43,282 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:43,295 [ scc.git] DEBUG Check current status
2026-11-10 23:55:43,295 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:43,320 [ scc.git] DEBUG 636540e Merge pull request #235 from will-moore/batch_roi_export_tags
2026-11-10 23:55:43,321 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:43,443 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:43,443 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-11-10 23:55:43,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-11-10 23:55:44,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:44,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:45,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:45,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:45,834 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:45,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:55:45,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-10 23:55:45,936 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-11-10 23:55:45,947 [ scc.git] DEBUG Check current status
2026-11-10 23:55:45,947 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:45,972 [ scc.git] DEBUG e19117680 Bump version: 5.33.3 → 5.33.4.dev0
2026-11-10 23:55:45,973 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:46,093 [ scc.config] DEBUG Found remote.origin.url
2026-11-10 23:55:46,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-11-10 23:55:47,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-11-10 23:55:47,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-11-10 23:55:47,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-11-10 23:55:48,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-11-10 23:55:48,464 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:55:48,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:55:48,566 [ scc.git] DEBUG Resetting...
2026-11-10 23:55:48,566 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-11-10 23:55:48,681 [ scc.git] DEBUG HEAD is now at a73ce42 merge master -Dorg -Snone
2026-11-10 23:55:48,682 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-11-10 23:55:49,028 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-11-10 23:55:49,431 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-11-10 23:55:49,717 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-11-10 23:55:50,497 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-11-10 23:55:50,522 [ scc.git] DEBUG Check current status
2026-11-10 23:55:50,522 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-11-10 23:55:50,539 [ scc.git] DEBUG a73ce42 merge master -Dorg -Snone
2026-11-10 23:55:50,540 [ scc.git] DEBUG Calling 'git submodule status'
2026-11-10 23:55:50,660 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-11-10 23:55:50,687 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-11-10 23:55:50,727 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-11-10 23:55:50,763 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-11-10 23:55:50,803 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-11-10 23:55:50,804 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-11-10 23:55:50,804 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-11-10 23:55:50,804 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-11-10 23:55:50,804 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-11-10 23:55:50,804 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-11-10 23:55:50,804 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-11-10 23:55:50,804 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:55:51,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-11-10 23:55:51,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-11-10 23:55:51,810 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:52,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:53,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:55:53,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:54,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:55:54,123 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-10 23:55:54,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-11-10 23:55:54,685 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:55,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:55,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:55:56,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:56,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:55:56,905 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-10 23:55:57,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-11-10 23:55:57,462 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:55:58,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:58,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:55:59,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-11-10 23:55:59,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:55:59,642 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-10 23:56:00,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-11-10 23:56:00,168 [ scc.repo] DEBUG # ... Include label: dependencies
2026-11-10 23:56:00,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:01,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:01,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:02,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:56:02,376 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-10 23:56:02,376 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:56:02,376 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:02,376 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:02,386 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:56:02,399 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:56:02,399 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:56:02,418 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:56:02,465 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:02,465 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-11-10 23:56:02,909 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:56:02,909 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-11-10 23:56:02,932 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-11-10 23:56:03,350 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:56:03,350 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-11-10 23:56:03,374 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-11-10 23:56:03,789 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:56:03,789 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-11-10 23:56:03,813 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-11-10 23:56:04,218 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-11-10 23:56:04,218 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-11-10 23:56:04,244 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:56:04,244 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:04,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:04,254 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-10 23:56:04,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:04,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-11-10 23:56:04,812 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:05,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:05,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-10 23:56:05,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:05,071 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-11-10 23:56:05,114 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:05,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:05,472 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-10 23:56:05,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:05,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-11-10 23:56:05,542 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:05,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:05,916 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-10 23:56:05,939 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:05,949 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-11-10 23:56:05,996 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:06,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:06,373 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:56:06,616 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:06,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:06,626 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:56:06,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-11-10 23:56:06,877 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:56:06,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-10 23:56:06,877 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:06,877 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:06,892 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:56:06,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:56:06,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:56:06,936 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:56:06,993 [ scc.git] DEBUG Already up to date.
2026-11-10 23:56:06,993 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:56:06,993 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:06,993 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:07,008 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:56:07,127 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:07,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:07,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:56:07,255 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:56:07,313 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f75f8ddd0> has no local changes
2026-11-10 23:56:07,313 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:56:07,450 [ scc.git] DEBUG [detached HEAD 5911fe8] merge master -Dorg -Ssuccess-only
2026-11-10 23:56:07,453 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:56:07,453 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:56:07,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-11-10 23:56:08,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-11-10 23:56:08,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-11-10 23:56:09,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-11-10 23:56:10,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-11-10 23:56:10,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-11-10 23:56:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-11-10 23:56:11,111 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:56:11,111 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-10 23:56:11,111 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:11,111 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:11,126 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:56:11,141 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:56:11,141 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:56:11,164 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:56:11,383 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-11-10 23:56:11,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 16751
2026-11-10 23:56:12,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 16795
2026-11-10 23:56:13,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 18914
2026-11-10 23:56:13,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 17870
2026-11-10 23:56:13,640 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:56:13,640 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:13,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:13,675 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:56:13,799 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:13,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:13,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:56:13,917 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:56:14,026 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f75f92210> has no local changes
2026-11-10 23:56:14,026 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:56:14,141 [ scc.git] DEBUG [detached HEAD 2039adf] merge master -Dorg -Ssuccess-only
2026-11-10 23:56:14,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:56:14,143 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:56:14,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-11-10 23:56:15,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-11-10 23:56:15,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-11-10 23:56:16,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-11-10 23:56:16,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-11-10 23:56:17,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:17,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:18,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:18,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:19,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:19,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:20,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-11-10 23:56:20,438 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-11-10 23:56:20,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-11-10 23:56:21,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-11-10 23:56:22,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:22,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:23,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:23,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:56:23,918 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-11-10 23:56:23,919 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:56:23,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-10 23:56:23,920 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:23,920 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:23,936 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:56:23,958 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:56:23,958 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:56:24,011 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:56:24,533 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-11-10 23:56:24,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 19705
2026-11-10 23:56:25,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 16729
2026-11-10 23:56:26,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 18345
2026-11-10 23:56:26,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 17681
2026-11-10 23:56:27,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 19338
2026-11-10 23:56:27,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 17694
2026-11-10 23:56:28,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 16270
2026-11-10 23:56:29,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 19630
2026-11-10 23:56:29,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 19226
2026-11-10 23:56:30,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 17037
2026-11-10 23:56:30,336 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-11-10 23:56:30,930 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-11-10 23:56:30,930 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-11-10 23:56:30,958 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-11-10 23:56:31,831 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-11-10 23:56:31,831 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-11-10 23:56:31,863 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:56:31,863 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:31,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:31,875 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-11-10 23:56:31,955 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:31,968 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-11-10 23:56:32,244 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-11-10 23:56:32,312 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:56:32,388 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-11-10 23:56:32,388 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-11-10 23:56:32,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:32,576 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-11-10 23:56:32,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:32,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-11-10 23:56:32,917 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-11-10 23:56:32,975 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:56:33,063 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-11-10 23:56:33,063 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-11-10 23:56:33,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:33,279 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:56:33,416 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:33,416 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:33,430 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:56:33,532 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:56:33,649 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f75dd3690> has no local changes
2026-11-10 23:56:33,649 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:56:33,803 [ scc.git] DEBUG [detached HEAD 1903b999] merge master -Dorg -Ssuccess-only
2026-11-10 23:56:33,807 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:56:33,807 [ scc.git] INFO Overriding base-branch from master to develop
2026-11-10 23:56:33,807 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:56:34,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-11-10 23:56:34,664 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-11-10 23:56:35,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:35,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:36,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:36,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:37,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-11-10 23:56:37,383 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-11-10 23:56:37,383 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:56:37,383 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-10 23:56:37,384 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:37,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:37,402 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-11-10 23:56:37,419 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:56:37,419 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-11-10 23:56:37,447 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-11-10 23:56:37,698 [ scc.git] DEBUG Updating 03b9116..636540e
2026-11-10 23:56:38,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/235 HTTP/1.1" 200 16917
2026-11-10 23:56:38,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 15981
2026-11-10 23:56:39,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 16955
2026-11-10 23:56:40,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 16867
2026-11-10 23:56:41,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 16558
2026-11-10 23:56:41,482 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-11-10 23:56:41,997 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-11-10 23:56:41,997 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-11-10 23:56:42,023 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:56:42,023 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:42,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:42,038 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-11-10 23:56:42,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:42,105 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-11-10 23:56:42,355 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:56:42,414 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-11-10 23:56:42,414 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-11-10 23:56:42,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:56:42,612 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:56:42,729 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:56:42,729 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:56:42,741 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:56:42,844 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:56:42,898 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f75f930d0> has no local changes
2026-11-10 23:56:42,898 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..636540e
Previously merged:
- PR 235 will-moore 'Batch roi export tags'
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:56:43,037 [ scc.git] DEBUG [detached HEAD de0cdca] merge master -Dorg -Ssuccess-only
2026-11-10 23:56:43,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:56:43,038 [ scc.repo] DEBUG ## PRs found:
2026-11-10 23:56:43,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-11-10 23:56:44,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/698 HTTP/1.1" 200 None
2026-11-10 23:56:44,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:45,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:45,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:46,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:46,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:47,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:47,796 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/627bc29cdd2e7650ad2507671100b7ddb5bc1e1e/status HTTP/1.1" 200 None
2026-11-10 23:56:47,797 [ scc.repo] DEBUG - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14'
2026-11-10 23:56:48,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/696 HTTP/1.1" 200 None
2026-11-10 23:56:48,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-11-10 23:56:49,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-11-10 23:56:49,472 [ scc.repo] DEBUG # ... Include label: include
2026-11-10 23:56:50,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:50,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:51,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/e0875bbfd72a48f55134e36f357baa3ff553edea/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:51,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-11-10 23:56:52,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-11-10 23:56:52,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:53,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:54,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:54,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:55,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:55,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:56,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-11-10 23:56:56,269 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-11-10 23:56:56,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-11-10 23:56:57,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-11-10 23:56:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-10 23:56:58,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:56:59,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:56:59,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:00,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:57:00,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:01,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8c81a68a11c64c7c576e1bf0710e30c1baea3b65/status HTTP/1.1" 200 None
2026-11-10 23:57:01,035 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-11-10 23:57:01,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-11-10 23:57:02,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-11-10 23:57:02,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-11-10 23:57:03,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-11-10 23:57:03,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:04,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:57:04,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:57:05,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:05,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:57:06,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:06,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-11-10 23:57:07,000 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel code cleanup'
2026-11-10 23:57:07,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-11-10 23:57:08,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-11-10 23:57:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:09,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-11-10 23:57:09,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-11-10 23:57:10,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:10,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/786a4d628d8264251fb0b21da8b41a0564fcbc27?per_page=1 HTTP/1.1" 200 None
2026-11-10 23:57:11,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27?page=1 HTTP/1.1" 200 None
2026-11-10 23:57:11,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/786a4d628d8264251fb0b21da8b41a0564fcbc27/status HTTP/1.1" 200 None
2026-11-10 23:57:11,748 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-11-10 23:57:11,749 [ scc.repo] DEBUG ## Branches found:
2026-11-10 23:57:11,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-10 23:57:11,749 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:57:11,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:11,766 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-11-10 23:57:11,784 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-11-10 23:57:11,784 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-11-10 23:57:11,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-11-10 23:57:13,017 [ scc.git] DEBUG Updating 675d57fd7..e19117680
2026-11-10 23:57:13,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/694 HTTP/1.1" 200 17569
2026-11-10 23:57:14,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/693 HTTP/1.1" 200 17567
2026-11-10 23:57:14,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 18804
2026-11-10 23:57:15,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 18414
2026-11-10 23:57:16,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 16436
2026-11-10 23:57:16,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 18441
2026-11-10 23:57:17,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 17419
2026-11-10 23:57:17,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 20596
2026-11-10 23:57:18,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 20247
2026-11-10 23:57:19,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 17478
2026-11-10 23:57:20,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 20393
2026-11-10 23:57:20,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 17859
2026-11-10 23:57:21,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 17478
2026-11-10 23:57:22,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 19633
2026-11-10 23:57:22,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 18266
2026-11-10 23:57:23,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 17586
2026-11-10 23:57:24,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 20046
2026-11-10 23:57:24,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 17922
2026-11-10 23:57:25,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 17710
2026-11-10 23:57:26,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 18308
2026-11-10 23:57:26,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 19115
2026-11-10 23:57:27,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 17985
2026-11-10 23:57:27,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 15980
2026-11-10 23:57:28,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 17438
2026-11-10 23:57:29,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 17482
2026-11-10 23:57:29,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 17558
2026-11-10 23:57:30,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 17704
2026-11-10 23:57:30,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 17472
2026-11-10 23:57:31,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 17212
2026-11-10 23:57:32,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 18744
2026-11-10 23:57:32,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 17664
2026-11-10 23:57:33,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 17224
2026-11-10 23:57:33,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 18805
2026-11-10 23:57:34,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 18510
2026-11-10 23:57:35,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 17952
2026-11-10 23:57:35,111 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-11-10 23:57:35,634 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-10 23:57:35,634 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-11-10 23:57:35,661 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-11-10 23:57:36,353 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-10 23:57:36,353 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-11-10 23:57:36,377 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-11-10 23:57:37,204 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-10 23:57:37,204 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-11-10 23:57:37,228 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-11-10 23:57:38,058 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-10 23:57:38,058 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-11-10 23:57:38,090 [ scc.git] DEBUG Calling 'git fetch origin pull/698/head'
2026-11-10 23:57:39,132 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-11-10 23:57:39,132 [ scc.git] DEBUG * branch refs/pull/698/head -> FETCH_HEAD
2026-11-10 23:57:39,157 [ scc.git] DEBUG ## Unique users: []
2026-11-10 23:57:39,157 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:57:39,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:39,173 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...786a4d628d8264251fb0b21da8b41a0564fcbc27'
2026-11-10 23:57:39,248 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:39,263 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 786a4d628d8264251fb0b21da8b41a0564fcbc27'
2026-11-10 23:57:39,812 [ scc.git] DEBUG Auto-merging omeroweb/webclient/templates/webclient/annotations/mapanns_underscore.html
2026-11-10 23:57:39,873 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:57:39,964 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-11-10 23:57:39,964 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/layout.css | 28 ++++-
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 90 ++++++++++++--
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 79 ++++++------
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../includes/metadata_general_file.html | 4 +-
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-11-10 23:57:39,964 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 29 +++--
2026-11-10 23:57:39,964 [ scc.git] DEBUG 13 files changed, 479 insertions(+), 83 deletions(-)
2026-11-10 23:57:40,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:40,174 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-11-10 23:57:40,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:40,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel code cleanup) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-11-10 23:57:40,618 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-11-10 23:57:40,618 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-11-10 23:57:40,682 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:57:40,770 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-11-10 23:57:40,771 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-11-10 23:57:40,771 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-11-10 23:57:40,771 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-11-10 23:57:40,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:40,996 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8c81a68a11c64c7c576e1bf0710e30c1baea3b65'
2026-11-10 23:57:41,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:41,138 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 8c81a68a11c64c7c576e1bf0710e30c1baea3b65'
2026-11-10 23:57:41,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:57:41,546 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-11-10 23:57:41,546 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-11-10 23:57:41,546 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 4 deletions(-)
2026-11-10 23:57:41,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:41,752 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-11-10 23:57:41,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:41,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-11-10 23:57:42,179 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:57:42,243 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-11-10 23:57:42,243 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-11-10 23:57:42,243 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-11-10 23:57:42,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:42,471 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...627bc29cdd2e7650ad2507671100b7ddb5bc1e1e'
2026-11-10 23:57:42,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:42,604 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 698 (Fix PEP765 warnings implemented in Python 3.14) 627bc29cdd2e7650ad2507671100b7ddb5bc1e1e'
2026-11-10 23:57:42,865 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-11-10 23:57:42,924 [ scc.git] DEBUG omero/plugins/web.py | 2 +-
2026-11-10 23:57:42,924 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-11-10 23:57:43,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:43,147 [ scc.git] DEBUG Calling 'git submodule update'
2026-11-10 23:57:43,273 [ scc.git] DEBUG Get sha1 of %s
2026-11-10 23:57:43,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-11-10 23:57:43,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:57:43,405 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:57:43,526 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f75dd5990> has no local changes
2026-11-10 23:57:43,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..e19117680
Previously merged:
- PR 694 knabar 'Fix exception when ann.ns is null'
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel code cleanup'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:57:43,681 [ scc.git] DEBUG [detached HEAD bfb3df47e] merge master -Dorg -Ssuccess-only
2026-11-10 23:57:43,684 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:57:43,684 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-11-10 23:57:43,806 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-11-10 23:57:44,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:44,036 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-11-10 23:57:44,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:44,514 [ scc.config] DEBUG Found submodule.omero-py.url
2026-11-10 23:57:44,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:44,992 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-11-10 23:57:45,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:45,447 [ scc.config] DEBUG Found submodule.omero-web.url
2026-11-10 23:57:45,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-11-10 23:57:45,913 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-11-10 23:57:46,573 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3f76d5a510> has local changes
2026-11-10 23:57:46,573 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..636540e
Previously merged:
- PR 235 will-moore 'Batch roi export tags'
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..e19117680
Previously merged:
- PR 694 knabar 'Fix exception when ann.ns is null'
- PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel code cleanup'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14'
Generated by OMERO-python-superbuild-push#112 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/112/)'
2026-11-10 23:57:46,841 [ scc.git] DEBUG [detached HEAD b39c738] merge master -Dorg -Ssuccess-only
2026-11-10 23:57:46,841 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-11-10 23:57:46,843 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-11-10 23:57:46,843 [ scc.merge] INFO Already up to date.
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Merged PRs:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-11-10 23:57:46,843 [ scc.merge] INFO Already up to date.
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Repository: ome/omero-marshal
2026-11-10 23:57:46,843 [ scc.merge] INFO Excluded PRs:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-11-10 23:57:46,843 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-11-10 23:57:46,843 [ scc.merge] INFO Previously merged:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Repository: ome/omero-py
2026-11-10 23:57:46,843 [ scc.merge] INFO Excluded PRs:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-11-10 23:57:46,843 [ scc.merge] INFO Updating b44120b5..8990768d
2026-11-10 23:57:46,843 [ scc.merge] INFO Previously merged:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Merged PRs:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-11-10 23:57:46,843 [ scc.merge] INFO
2026-11-10 23:57:46,843 [ scc.merge] INFO Repository: ome/omero-scripts
2026-11-10 23:57:46,843 [ scc.merge] INFO Updating 03b9116..636540e
2026-11-10 23:57:46,843 [ scc.merge] INFO Previously merged:
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 235 will-moore 'Batch roi export tags'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-11-10 23:57:46,843 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-11-10 23:57:46,844 [ scc.merge] INFO
2026-11-10 23:57:46,844 [ scc.merge] INFO Merged PRs:
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-11-10 23:57:46,844 [ scc.merge] INFO
2026-11-10 23:57:46,844 [ scc.merge] INFO Repository: ome/omero-web
2026-11-10 23:57:46,844 [ scc.merge] INFO Excluded PRs:
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 696 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"' (status: action_required)
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-11-10 23:57:46,844 [ scc.merge] INFO Updating 675d57fd7..e19117680
2026-11-10 23:57:46,844 [ scc.merge] INFO Previously merged:
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 694 knabar 'Fix exception when ann.ns is null'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 693 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-11-10 23:57:46,844 [ scc.merge] INFO
2026-11-10 23:57:46,844 [ scc.merge] INFO Merged PRs:
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 604 will-moore 'Right panel code cleanup'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-11-10 23:57:46,844 [ scc.merge] INFO - PR 698 sbesson 'Fix PEP765 warnings implemented in Python 3.14'
2026-11-10 23:57:46,844 [ scc.merge] INFO
2026-11-10 23:57:46,844 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-11-10 23:57:46,844 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-11-10 23:57:46,857 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:57:46,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-11-10 23:57:46,872 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:57:46,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-11-10 23:57:46,889 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:57:46,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-11-10 23:57:46,905 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-11-10 23:57:46,920 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-11-10 23:57:46,921 [ scc.git] DEBUG Calling 'git remote'
2026-11-10 23:57:46,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/local/lib/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require'
warnings.warn(msg)
/home/omero/workspace/OMERO-python-superbuild-push/build/venv/lib/python3.11/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated.
!!
********************************************************************************
Please consider removing the following classifiers in favor of a SPDX license expression:
License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details.
********************************************************************************
!!
self._finalize_license_expression()
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-11-10 23:58:26,700 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
