![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 435 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 1ac5a0cfa9f16361af1cce69d268027821a07127 (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 1ac5a0cfa9f16361af1cce69d268027821a07127 # timeout=10 Commit message: "Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276" > git rev-list --no-walk 1ac5a0cfa9f16361af1cce69d268027821a07127 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 392 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.0.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.0.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.1-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.1.31-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached typing_extensions-4.13.1-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached certifi-2025.1.31-py3-none-any.whl (166 kB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.1.31 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.1 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-04-09 01:08:03,977 [ scc.config] DEBUG Found github.token 2025-04-09 01:08:03,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:04,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:04,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:04,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:04,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:05,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-09 01:08:05,002 [ scc.gh] DEBUG 4987 remaining from 5000 (Reset at 02:04 2025-04-09 01:08:05,003 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:05,005 [ scc.git] DEBUG Check current status 2025-04-09 01:08:05,005 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:05,008 [ scc.git] DEBUG 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-09 01:08:05,008 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:05,052 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-09 01:08:05,263 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-09 01:08:07,235 [ scc.git] DEBUG 2037276b082ea7d828caa0e66ada754de2a6c62f omero-py (v5.19.8-15-g2037276b) 2025-04-09 01:08:07,241 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-09 01:08:07,245 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-09 01:08:07,248 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:07,250 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:07,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-09 01:08:07,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:08,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:08,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:08,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:08,727 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:08,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:09,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:09,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:09,355 [ scc.git] DEBUG Resetting... 2025-04-09 01:08:09,355 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-09 01:08:09,361 [ scc.git] DEBUG HEAD is now at 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-09 01:08:09,361 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-09 01:08:09,416 [ scc.git] DEBUG Check current status 2025-04-09 01:08:09,416 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:09,418 [ scc.git] DEBUG 1ac5a0c Merge pull request #317 from ome/dependabot/submodules/omero-py-2037276 2025-04-09 01:08:09,418 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:09,457 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-09 01:08:09,460 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-09 01:08:09,470 [ scc.git] DEBUG 2037276b082ea7d828caa0e66ada754de2a6c62f omero-py (v5.19.8-15-g2037276b) 2025-04-09 01:08:09,474 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-09 01:08:09,479 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-09 01:08:09,479 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-09 01:08:09,479 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-09 01:08:09,479 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-09 01:08:09,479 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-09 01:08:09,479 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-09 01:08:09,479 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:08:09,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:09,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-09 01:08:09,787 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:08:09,787 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:09,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:09,790 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:08:09,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:08:09,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:08:09,794 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:08:09,797 [ scc.git] DEBUG Already up to date. 2025-04-09 01:08:09,797 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:08:09,797 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:09,797 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:09,799 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:08:09,838 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:09,838 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:09,840 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:08:09,939 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f13b76d6290> has no local changes 2025-04-09 01:08:09,939 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:08:09,964 [ scc.git] DEBUG [detached HEAD 2f88d9b] merge master -Dorg -Snone 2025-04-09 01:08:09,964 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-09 01:08:09,964 [ scc.merge] INFO Already up to date. 2025-04-09 01:08:09,964 [ scc.merge] INFO 2025-04-09 01:08:09,964 [ scc.merge] INFO 2025-04-09 01:08:09,964 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-09 01:08:09,964 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' From https://github.com/ome/omero-py dabb85d9..257ecac5 master -> origin/master * [new tag] v5.20.0 -> v5.20.0 Submodule path 'omero-py': checked out '257ecac5c9960d2ad60522b944b89cb3534986e0' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-09 01:08:14,143 [ scc.config] DEBUG Found github.token 2025-04-09 01:08:14,145 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:14,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:14,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:14,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:14,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:15,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-09 01:08:15,125 [ scc.gh] DEBUG 4979 remaining from 5000 (Reset at 02:04 2025-04-09 01:08:15,126 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:15,128 [ scc.git] DEBUG Check current status 2025-04-09 01:08:15,128 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:15,130 [ scc.git] DEBUG 2f88d9b merge master -Dorg -Snone 2025-04-09 01:08:15,131 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:15,171 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-09 01:08:15,174 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-09 01:08:15,179 [ scc.git] DEBUG +257ecac5c9960d2ad60522b944b89cb3534986e0 omero-py (v5.20.0-1-g257ecac5) 2025-04-09 01:08:15,184 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-09 01:08:15,188 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-09 01:08:15,191 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:15,191 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-04-09 01:08:15,192 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-09 01:08:15,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:15,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-09 01:08:15,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:16,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:16,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:16,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:16,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:16,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:17,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:17,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:17,409 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:17,454 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-09 01:08:17,454 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:17,456 [ scc.git] DEBUG Check current status 2025-04-09 01:08:17,456 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:17,459 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-04-09 01:08:17,459 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:17,497 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:17,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:17,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-04-09 01:08:18,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:18,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:18,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:18,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:19,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:19,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:19,556 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:19,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:19,719 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:19,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:19,757 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-09 01:08:19,757 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:19,759 [ scc.git] DEBUG Check current status 2025-04-09 01:08:19,759 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:19,761 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-04-09 01:08:19,762 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:19,800 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:19,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:20,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-04-09 01:08:20,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:20,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:20,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:21,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:21,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:21,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:21,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:22,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:22,005 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:22,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:22,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-09 01:08:22,044 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:22,046 [ scc.git] DEBUG Check current status 2025-04-09 01:08:22,046 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:22,049 [ scc.git] DEBUG 257ecac5 Bump version: 5.20.0 → 5.20.1.dev0 2025-04-09 01:08:22,049 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:22,087 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:22,256 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:22,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-04-09 01:08:22,764 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:22,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:23,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:23,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:23,672 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:23,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:24,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:24,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:24,310 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:24,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:24,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-09 01:08:24,350 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:24,353 [ scc.git] DEBUG Check current status 2025-04-09 01:08:24,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:24,355 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-09 01:08:24,355 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:24,394 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:24,394 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-04-09 01:08:24,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:24,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-04-09 01:08:25,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:25,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:25,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:25,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:26,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:26,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:26,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:26,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:26,708 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:26,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:26,747 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-09 01:08:26,747 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-09 01:08:26,749 [ scc.git] DEBUG Check current status 2025-04-09 01:08:26,749 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:26,752 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-04-09 01:08:26,752 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:26,790 [ scc.config] DEBUG Found remote.origin.url 2025-04-09 01:08:26,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:27,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-04-09 01:08:27,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:27,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-09 01:08:27,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:28,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-09 01:08:28,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:28,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-09 01:08:28,811 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:28,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-09 01:08:28,988 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:29,025 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:29,025 [ scc.git] DEBUG Resetting... 2025-04-09 01:08:29,025 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-09 01:08:29,030 [ scc.git] DEBUG HEAD is now at 2f88d9b merge master -Dorg -Snone 2025-04-09 01:08:29,030 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-09 01:08:29,095 [ scc.git] DEBUG Submodule path 'omero-py': checked out '2037276b082ea7d828caa0e66ada754de2a6c62f' 2025-04-09 01:08:29,105 [ scc.git] DEBUG Check current status 2025-04-09 01:08:29,105 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-09 01:08:29,107 [ scc.git] DEBUG 2f88d9b merge master -Dorg -Snone 2025-04-09 01:08:29,108 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-09 01:08:29,147 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-09 01:08:29,151 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-09 01:08:29,161 [ scc.git] DEBUG 2037276b082ea7d828caa0e66ada754de2a6c62f omero-py (v5.19.8-15-g2037276b) 2025-04-09 01:08:29,165 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-09 01:08:29,170 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-09 01:08:29,170 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-09 01:08:29,170 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-09 01:08:29,170 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-09 01:08:29,170 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-09 01:08:29,170 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-09 01:08:29,170 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-04-09 01:08:29,170 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:08:29,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:29,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-09 01:08:29,429 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:08:29,429 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:29,430 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:29,432 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:08:29,434 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:08:29,434 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:08:29,436 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:08:29,439 [ scc.git] DEBUG Already up to date. 2025-04-09 01:08:29,439 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:08:29,439 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:29,439 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:29,441 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:08:29,480 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:29,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:29,482 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:08:29,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:29,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-04-09 01:08:30,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:30,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-04-09 01:08:30,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:30,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-04-09 01:08:31,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:31,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-09 01:08:31,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:31,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:32,192 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:32,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-09 01:08:32,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:08:32,952 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-09 01:08:32,952 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:08:32,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-09 01:08:32,952 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:32,952 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:32,955 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:08:32,957 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:08:32,957 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:08:32,960 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:08:32,963 [ scc.git] DEBUG Already up to date. 2025-04-09 01:08:32,963 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-04-09 01:08:33,254 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-04-09 01:08:33,254 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-04-09 01:08:33,258 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:08:33,259 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:33,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:33,261 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-09 01:08:33,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:33,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-04-09 01:08:33,443 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-04-09 01:08:33,444 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-04-09 01:08:33,448 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-04-09 01:08:33,448 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-04-09 01:08:33,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:33,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:33,611 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:08:33,650 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:33,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:33,652 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:33,690 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:08:33,694 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f528a18e790> has no local changes 2025-04-09 01:08:33,695 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:08:33,702 [ scc.git] DEBUG [detached HEAD c26b196] merge master -Dorg -Ssuccess-only 2025-04-09 01:08:33,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:33,702 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:08:33,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:34,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-04-09 01:08:34,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:34,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-04-09 01:08:34,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:35,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-04-09 01:08:35,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:35,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-04-09 01:08:35,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:36,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-04-09 01:08:36,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:36,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-09 01:08:36,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:37,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:37,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:37,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-09 01:08:37,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:38,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:08:38,047 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-09 01:08:38,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:38,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-04-09 01:08:38,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:38,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-04-09 01:08:39,244 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:39,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-04-09 01:08:39,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:39,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-04-09 01:08:39,944 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:08:39,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-09 01:08:39,944 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:39,944 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:39,946 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:08:39,949 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:08:39,949 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:08:39,952 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:08:39,955 [ scc.git] DEBUG Already up to date. 2025-04-09 01:08:39,955 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-04-09 01:08:40,264 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-04-09 01:08:40,264 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-04-09 01:08:40,269 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:08:40,269 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:40,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:40,271 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-09 01:08:40,275 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:40,277 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-09 01:08:40,294 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-04-09 01:08:40,295 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:08:40,299 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-04-09 01:08:40,299 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-04-09 01:08:40,299 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-04-09 01:08:40,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:40,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:08:40,452 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:08:40,490 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:08:40,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:08:40,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:08:40,530 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:08:40,534 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f528925a6d0> has no local changes 2025-04-09 01:08:40,534 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:08:40,541 [ scc.git] DEBUG [detached HEAD 6db2b86] merge master -Dorg -Ssuccess-only 2025-04-09 01:08:40,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:08:40,542 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:08:40,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:41,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-04-09 01:08:41,333 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:41,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-04-09 01:08:41,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:42,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-04-09 01:08:42,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:42,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-09 01:08:43,067 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:43,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:43,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:43,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:08:44,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:44,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-09 01:08:44,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:44,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:45,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:45,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-09 01:08:45,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:45,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-04-09 01:08:45,785 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-09 01:08:46,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:46,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-04-09 01:08:46,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:46,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-04-09 01:08:46,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:47,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-04-09 01:08:47,293 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-04-09 01:08:47,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:47,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2025-04-09 01:08:48,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:48,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2025-04-09 01:08:48,426 [ scc.repo] DEBUG # ... Include label: include 2025-04-09 01:08:48,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:48,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574 HTTP/1.1" 200 None 2025-04-09 01:08:49,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:49,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:49,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:49,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:08:50,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:50,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574 HTTP/1.1" 200 None 2025-04-09 01:08:50,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:50,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/debacf8571f6c58b095f393aacc1197fc4aad574?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:51,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:51,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574 HTTP/1.1" 200 None 2025-04-09 01:08:51,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:51,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/debacf8571f6c58b095f393aacc1197fc4aad574/status HTTP/1.1" 200 None 2025-04-09 01:08:51,757 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2025-04-09 01:08:52,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:52,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-04-09 01:08:52,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:52,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-04-09 01:08:53,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:53,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-09 01:08:53,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:53,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:54,117 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:54,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:08:54,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:54,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-09 01:08:55,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:55,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:55,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:55,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-09 01:08:56,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:56,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-04-09 01:08:56,214 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-04-09 01:08:56,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:56,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-04-09 01:08:56,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:57,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-04-09 01:08:57,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:57,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-04-09 01:08:57,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:58,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:08:58,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:58,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:08:58,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:59,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-04-09 01:08:59,474 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:08:59,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-04-09 01:08:59,953 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:00,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-09 01:09:00,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:00,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:00,956 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:01,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-09 01:09:01,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:01,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:09:01,649 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-04-09 01:09:01,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:02,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-04-09 01:09:02,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:02,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-04-09 01:09:02,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:03,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-09 01:09:03,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:03,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:03,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:04,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-09 01:09:04,295 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:04,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:09:04,471 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-04-09 01:09:04,722 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:04,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-04-09 01:09:05,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:05,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-04-09 01:09:05,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:05,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-04-09 01:09:06,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:06,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-04-09 01:09:06,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:06,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-09 01:09:07,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:07,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:07,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:07,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-09 01:09:08,235 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:08,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:09:08,442 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-04-09 01:09:08,443 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:09:08,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-09 01:09:08,443 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:08,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:08,446 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:09:08,449 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:09:08,449 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:09:08,452 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:09:08,479 [ scc.git] DEBUG Updating 2037276b..257ecac5 2025-04-09 01:09:08,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:09,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/387 HTTP/1.1" 200 None 2025-04-09 01:09:09,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:09,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/458 HTTP/1.1" 200 None 2025-04-09 01:09:09,832 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-04-09 01:09:10,137 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:10,138 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-04-09 01:09:10,142 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-04-09 01:09:10,608 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:10,608 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-04-09 01:09:10,612 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-04-09 01:09:10,902 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:10,903 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-04-09 01:09:10,907 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-04-09 01:09:11,259 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:11,260 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-04-09 01:09:11,265 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2025-04-09 01:09:12,775 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:12,775 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2025-04-09 01:09:12,780 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-04-09 01:09:13,603 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-09 01:09:13,603 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-04-09 01:09:13,608 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:09:13,608 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:13,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:13,610 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-09 01:09:13,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:13,625 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-09 01:09:13,761 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-04-09 01:09:13,761 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-04-09 01:09:13,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:13,766 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-04-09 01:09:13,766 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-04-09 01:09:13,766 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-04-09 01:09:13,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:13,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:13,933 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-09 01:09:13,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:13,947 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-09 01:09:13,967 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:13,970 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-04-09 01:09:13,970 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-04-09 01:09:13,970 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-04-09 01:09:13,970 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-04-09 01:09:13,970 [ scc.git] DEBUG create mode 100644 connect.py 2025-04-09 01:09:14,184 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:14,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:14,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-04-09 01:09:14,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:14,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-04-09 01:09:14,495 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-04-09 01:09:14,497 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:14,501 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-04-09 01:09:14,501 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-04-09 01:09:14,594 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:14,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:14,789 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-09 01:09:14,801 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:14,803 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-09 01:09:15,001 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-09 01:09:15,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:15,010 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-04-09 01:09:15,010 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-04-09 01:09:15,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:15,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:15,217 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...debacf8571f6c58b095f393aacc1197fc4aad574' 2025-04-09 01:09:15,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:15,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) debacf8571f6c58b095f393aacc1197fc4aad574' 2025-04-09 01:09:15,376 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:15,380 [ scc.git] DEBUG .gitignore | 1 + 2025-04-09 01:09:15,380 [ scc.git] DEBUG src/omero/plugins/download.py | 13 ++++++++----- 2025-04-09 01:09:15,380 [ scc.git] DEBUG 2 files changed, 9 insertions(+), 5 deletions(-) 2025-04-09 01:09:15,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:15,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:15,636 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-09 01:09:15,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:15,651 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-09 01:09:15,705 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-09 01:09:15,707 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:15,714 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-04-09 01:09:15,714 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-04-09 01:09:15,714 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-04-09 01:09:15,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:16,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:16,054 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:09:16,092 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:16,092 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:16,095 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:09:16,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:09:16,138 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5289246210> has no local changes 2025-04-09 01:09:16,138 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 2037276b..257ecac5 Previously merged: - PR 387 will-moore 'Numpy pixels type' - PR 458 sbesson 'omero admin jvmcfg: remove MaxPermSize option' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:09:16,147 [ scc.git] DEBUG [detached HEAD 4358b9d5] merge master -Dorg -Ssuccess-only 2025-04-09 01:09:16,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:09:16,148 [ scc.git] INFO Overriding base-branch from master to develop 2025-04-09 01:09:16,148 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:09:16,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:16,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-04-09 01:09:16,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:17,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-04-09 01:09:17,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:17,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-04-09 01:09:17,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:18,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-09 01:09:18,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:18,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:18,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:19,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:19,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:19,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-09 01:09:20,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:20,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:09:20,192 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-09 01:09:20,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:20,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-04-09 01:09:20,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:21,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-04-09 01:09:21,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:21,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-09 01:09:21,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:22,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:22,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:22,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-09 01:09:23,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:23,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:09:23,209 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-09 01:09:23,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:23,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-04-09 01:09:23,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:24,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-04-09 01:09:24,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:24,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-04-09 01:09:24,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:25,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-04-09 01:09:25,273 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:09:25,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-09 01:09:25,273 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:25,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:25,276 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-04-09 01:09:25,279 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:09:25,279 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-04-09 01:09:25,282 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-04-09 01:09:25,285 [ scc.git] DEBUG Already up to date. 2025-04-09 01:09:25,285 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-04-09 01:09:26,145 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-09 01:09:26,145 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-04-09 01:09:26,149 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-04-09 01:09:26,757 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-09 01:09:26,757 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-04-09 01:09:26,761 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:09:26,762 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:26,762 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:26,764 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-09 01:09:26,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:26,772 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-09 01:09:26,849 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-04-09 01:09:26,850 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-04-09 01:09:26,850 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-04-09 01:09:26,852 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-09 01:09:26,856 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-09 01:09:26,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:27,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:27,031 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-09 01:09:27,036 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-09 01:09:27,040 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#372](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-04-09 01:09:27,042 [ scc.config] DEBUG Found github.token 2025-04-09 01:09:27,042 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-04-09 01:09:27,042 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-09 01:09:27,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:27,049 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-09 01:09:27,059 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:09:27,062 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-04-09 01:09:27,062 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-04-09 01:09:27,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:27,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:09:27,442 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:09:27,480 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:09:27,480 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:09:27,482 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:09:27,519 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:09:27,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f528af82390> has no local changes 2025-04-09 01:09:27,523 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:09:27,529 [ scc.git] DEBUG [detached HEAD 4090f9f] merge master -Dorg -Ssuccess-only 2025-04-09 01:09:27,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:09:27,530 [ scc.repo] DEBUG ## PRs found: 2025-04-09 01:09:27,693 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:28,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-04-09 01:09:28,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:28,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-04-09 01:09:28,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:29,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-04-09 01:09:29,398 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:29,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-09 01:09:29,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:30,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:30,432 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:30,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:30,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:31,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-09 01:09:31,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:31,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:31,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:32,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-09 01:09:32,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:32,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-04-09 01:09:32,587 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-09 01:09:32,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:33,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-04-09 01:09:33,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:33,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-04-09 01:09:33,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:34,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-09 01:09:34,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:34,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:34,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:35,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:35,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:35,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-09 01:09:35,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:36,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:36,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:36,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-09 01:09:36,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:37,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-04-09 01:09:37,043 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-04-09 01:09:37,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:37,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-04-09 01:09:37,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:38,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-04-09 01:09:38,336 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:38,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-09 01:09:38,865 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:39,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:39,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:39,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:39,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:40,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-09 01:09:40,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:40,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:40,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:41,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-09 01:09:41,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:41,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-04-09 01:09:41,594 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-04-09 01:09:41,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:42,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-04-09 01:09:42,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:42,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-04-09 01:09:42,804 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:43,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-09 01:09:43,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:43,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:43,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:44,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:44,350 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:44,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-09 01:09:44,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:45,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:45,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:45,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-09 01:09:45,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:45,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-04-09 01:09:45,935 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-09 01:09:46,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:46,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-04-09 01:09:46,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:46,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-09 01:09:47,198 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:47,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:47,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:47,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:48,208 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:48,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-09 01:09:48,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:48,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:49,131 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:49,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-09 01:09:49,609 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:49,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-04-09 01:09:49,817 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-09 01:09:50,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:50,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-04-09 01:09:50,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:50,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-04-09 01:09:51,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:51,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-09 01:09:51,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:51,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:52,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:52,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:52,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:52,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-09 01:09:53,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:53,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:53,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:53,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-09 01:09:54,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:54,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-04-09 01:09:54,240 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-04-09 01:09:54,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:54,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-04-09 01:09:54,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:55,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-09 01:09:55,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:55,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:55,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:56,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:09:56,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:56,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-09 01:09:56,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:57,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:09:57,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:57,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-09 01:09:57,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:58,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-04-09 01:09:58,102 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-09 01:09:58,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:58,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-04-09 01:09:58,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:59,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-04-09 01:09:59,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:09:59,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-09 01:09:59,844 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:00,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:00,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:00,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:10:00,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:01,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-09 01:10:01,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:01,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:01,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:02,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-09 01:10:02,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:02,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-04-09 01:10:02,747 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-09 01:10:02,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:03,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-04-09 01:10:03,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:03,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-04-09 01:10:04,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:04,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-09 01:10:04,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:04,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:05,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:05,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:10:05,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:05,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-09 01:10:05,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:06,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:06,451 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:06,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-09 01:10:06,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:07,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-04-09 01:10:07,136 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-09 01:10:07,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:07,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-04-09 01:10:07,887 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:08,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-04-09 01:10:08,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:08,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-04-09 01:10:08,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:09,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-04-09 01:10:09,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:09,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-09 01:10:09,894 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:10,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:10,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:10,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:10:10,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:11,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-09 01:10:11,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:11,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:11,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:12,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-09 01:10:12,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:12,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2025-04-09 01:10:12,541 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-09 01:10:12,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:13,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-04-09 01:10:13,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:13,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-04-09 01:10:13,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:14,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-09 01:10:14,308 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:14,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:14,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:14,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-09 01:10:15,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:15,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-04-09 01:10:15,405 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-09 01:10:15,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:15,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-04-09 01:10:16,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:16,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-04-09 01:10:16,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:16,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-04-09 01:10:17,124 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:17,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-09 01:10:17,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:17,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-09 01:10:17,864 [ scc.repo] DEBUG ## Branches found: 2025-04-09 01:10:17,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-09 01:10:17,865 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:10:17,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:17,867 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-09 01:10:17,870 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-09 01:10:17,870 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-09 01:10:17,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-09 01:10:17,940 [ scc.git] DEBUG Already up to date. 2025-04-09 01:10:17,940 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-04-09 01:10:20,501 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:20,501 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-04-09 01:10:20,505 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-04-09 01:10:20,808 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:20,808 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-04-09 01:10:20,812 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-04-09 01:10:21,642 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:21,642 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-04-09 01:10:21,646 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-04-09 01:10:22,223 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:22,224 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-04-09 01:10:22,228 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-04-09 01:10:22,496 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:22,497 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-04-09 01:10:22,501 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-04-09 01:10:23,396 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:23,396 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-04-09 01:10:23,400 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-04-09 01:10:23,775 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:23,775 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-04-09 01:10:23,779 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-04-09 01:10:24,225 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:24,225 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-04-09 01:10:24,229 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-04-09 01:10:25,263 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:25,263 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-04-09 01:10:25,267 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-04-09 01:10:25,729 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:25,729 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-04-09 01:10:25,733 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-04-09 01:10:26,073 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-09 01:10:26,073 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-04-09 01:10:26,077 [ scc.git] DEBUG ## Unique users: [] 2025-04-09 01:10:26,077 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:10:26,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:26,079 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-09 01:10:26,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:26,089 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-09 01:10:26,235 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-04-09 01:10:26,235 [ scc.git] DEBUG Auto-merging setup.py 2025-04-09 01:10:26,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:26,240 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-04-09 01:10:26,240 [ scc.git] DEBUG setup.py | 1 + 2025-04-09 01:10:26,240 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-04-09 01:10:26,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:26,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:26,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-09 01:10:26,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:26,413 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-09 01:10:26,562 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-04-09 01:10:26,562 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-04-09 01:10:26,564 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:26,568 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-04-09 01:10:26,568 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-04-09 01:10:26,568 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-04-09 01:10:26,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:26,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:26,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-09 01:10:26,818 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:26,821 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-09 01:10:26,851 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:26,855 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-04-09 01:10:26,855 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-09 01:10:27,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:27,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:27,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-09 01:10:27,251 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:27,253 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-09 01:10:27,392 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:27,396 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-04-09 01:10:27,396 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-04-09 01:10:27,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:27,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:27,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-09 01:10:27,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:27,666 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-09 01:10:27,929 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:27,934 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-04-09 01:10:27,935 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-04-09 01:10:27,935 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-04-09 01:10:27,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:28,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:28,118 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-09 01:10:28,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:28,129 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-09 01:10:28,341 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-04-09 01:10:28,342 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:28,348 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-04-09 01:10:28,348 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-04-09 01:10:28,348 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-04-09 01:10:28,349 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-04-09 01:10:28,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:28,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:28,530 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-09 01:10:28,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:28,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-09 01:10:28,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:28,767 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-04-09 01:10:28,767 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-04-09 01:10:28,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:28,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:28,953 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-09 01:10:28,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:28,964 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-09 01:10:29,097 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:29,101 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-04-09 01:10:29,101 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-04-09 01:10:29,101 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-04-09 01:10:29,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:29,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:29,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-09 01:10:29,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:29,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-09 01:10:29,515 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:29,519 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-04-09 01:10:29,519 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-04-09 01:10:29,519 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-04-09 01:10:29,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:29,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:29,773 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-09 01:10:29,782 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:29,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-09 01:10:29,804 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:29,807 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-04-09 01:10:29,807 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-04-09 01:10:30,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:30,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:30,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-09 01:10:30,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:30,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-09 01:10:30,217 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-09 01:10:30,221 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-04-09 01:10:30,221 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-09 01:10:30,438 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:30,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:30,595 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-09 01:10:30,635 [ scc.git] DEBUG Get sha1 of %s 2025-04-09 01:10:30,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-09 01:10:30,637 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:10:30,675 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:10:30,683 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f5289ee1210> has no local changes 2025-04-09 01:10:30,683 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:10:30,692 [ scc.git] DEBUG [detached HEAD 1d7542ae3] merge master -Dorg -Ssuccess-only 2025-04-09 01:10:30,693 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:10:30,693 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-09 01:10:30,739 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-04-09 01:10:30,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:31,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:31,019 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-04-09 01:10:31,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:31,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:31,457 [ scc.config] DEBUG Found submodule.omero-py.url 2025-04-09 01:10:31,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:31,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:31,868 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-04-09 01:10:32,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:32,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:32,283 [ scc.config] DEBUG Found submodule.omero-web.url 2025-04-09 01:10:32,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-09 01:10:32,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-09 01:10:32,701 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-09 01:10:32,730 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f528b6f5710> has local changes 2025-04-09 01:10:32,730 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Updating 2037276b..257ecac5 Previously merged: - PR 387 will-moore 'Numpy pixels type' - PR 458 sbesson 'omero admin jvmcfg: remove MaxPermSize option' Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#372 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/372/)' 2025-04-09 01:10:32,738 [ scc.git] DEBUG [detached HEAD 219660a] merge master -Dorg -Ssuccess-only 2025-04-09 01:10:32,738 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-04-09 01:10:32,738 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-09 01:10:32,738 [ scc.merge] INFO Already up to date. 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-04-09 01:10:32,738 [ scc.merge] INFO Already up to date. 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO Merged PRs: 2025-04-09 01:10:32,738 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO Repository: ome/omero-marshal 2025-04-09 01:10:32,738 [ scc.merge] INFO Excluded PRs: 2025-04-09 01:10:32,738 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-04-09 01:10:32,738 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-04-09 01:10:32,738 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-04-09 01:10:32,738 [ scc.merge] INFO Already up to date. 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO Merged PRs: 2025-04-09 01:10:32,738 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-09 01:10:32,738 [ scc.merge] INFO 2025-04-09 01:10:32,738 [ scc.merge] INFO Repository: ome/omero-py 2025-04-09 01:10:32,739 [ scc.merge] INFO Excluded PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-04-09 01:10:32,739 [ scc.merge] INFO Updating 2037276b..257ecac5 2025-04-09 01:10:32,739 [ scc.merge] INFO Previously merged: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 458 sbesson 'omero admin jvmcfg: remove MaxPermSize option' 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Merged PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Repository: ome/omero-scripts 2025-04-09 01:10:32,739 [ scc.merge] INFO Excluded PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-04-09 01:10:32,739 [ scc.merge] INFO Already up to date. 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Merged PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Conflicting PRs (not included): 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Repository: ome/omero-web 2025-04-09 01:10:32,739 [ scc.merge] INFO Excluded PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-04-09 01:10:32,739 [ scc.merge] INFO Already up to date. 2025-04-09 01:10:32,739 [ scc.merge] INFO 2025-04-09 01:10:32,739 [ scc.merge] INFO Merged PRs: 2025-04-09 01:10:32,739 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-04-09 01:10:32,740 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-09 01:10:32,740 [ scc.merge] INFO 2025-04-09 01:10:32,740 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-09 01:10:32,740 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-09 01:10:32,742 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:10:32,744 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-09 01:10:32,744 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:10:32,746 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-09 01:10:32,746 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:10:32,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-09 01:10:32,749 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-09 01:10:32,751 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-09 01:10:32,751 [ scc.git] DEBUG Calling 'git remote' 2025-04-09 01:10:32,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 2037276b nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 1ac5a0c nothing to commit, working tree clean 2025-04-09 01:11:02,051 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS