Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-08-19 09:35:03,846 [ scc.config] DEBUG Found github.token
2026-08-19 09:35:03,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-19 09:35:04,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:04,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:04,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-19 09:35:04,996 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 10:08
2026-08-19 09:35:04,996 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:05,007 [ scc.git] DEBUG Check current status
2026-08-19 09:35:05,007 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:05,027 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-19 09:35:05,028 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:05,180 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-19 09:35:05,257 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-19 09:35:05,354 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-19 09:35:05,395 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-19 09:35:05,449 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-19 09:35:05,459 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:05,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-19 09:35:06,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:06,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:07,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:07,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:07,685 [ scc.git] DEBUG Resetting...
2026-08-19 09:35:07,685 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-19 09:35:07,866 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-19 09:35:07,867 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-19 09:35:08,256 [ scc.git] DEBUG Check current status
2026-08-19 09:35:08,256 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:08,274 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-19 09:35:08,275 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:08,406 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-19 09:35:08,439 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-19 09:35:08,480 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-19 09:35:08,514 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-19 09:35:08,536 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-19 09:35:08,537 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-19 09:35:08,537 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-19 09:35:08,537 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-19 09:35:08,537 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-19 09:35:08,537 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-19 09:35:08,537 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:35:08,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-19 09:35:09,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-19 09:35:09,491 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:09,491 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-19 09:35:10,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-19 09:35:10,029 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:10,029 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-19 09:35:10,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-19 09:35:10,631 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:10,631 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-19 09:35:11,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-19 09:35:11,196 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:11,196 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-19 09:35:11,197 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:35:11,197 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:35:11,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:11,209 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:35:11,225 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:35:11,225 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:35:11,246 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:35:11,300 [ scc.git] DEBUG Already up to date.
2026-08-19 09:35:11,300 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-19 09:35:11,878 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:11,878 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-19 09:35:11,904 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-19 09:35:12,381 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:12,381 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-19 09:35:12,411 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-19 09:35:12,853 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:12,853 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-19 09:35:12,890 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-19 09:35:13,352 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:13,353 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-19 09:35:13,380 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:35:13,380 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:35:13,381 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:13,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-19 09:35:13,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:13,419 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-19 09:35:13,687 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:35:13,738 [ scc.git] DEBUG omero-marshal | 2 +-
2026-08-19 09:35:13,738 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-19 09:35:13,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:13,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-19 09:35:13,969 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:13,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-19 09:35:14,305 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:35:14,377 [ scc.git] DEBUG omero-web | 2 +-
2026-08-19 09:35:14,378 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-19 09:35:14,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:14,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-19 09:35:14,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:14,609 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-19 09:35:14,931 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:35:14,992 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-08-19 09:35:14,992 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-19 09:35:15,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:15,238 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-19 09:35:15,273 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:15,283 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-19 09:35:15,575 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:35:15,631 [ scc.git] DEBUG omero-py | 2 +-
2026-08-19 09:35:15,631 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-19 09:35:15,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:15,813 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:35:16,145 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-08-19 09:35:16,419 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-19 09:35:16,963 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-19 09:35:17,749 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-19 09:35:17,750 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:35:17,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:17,761 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:35:18,632 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1fc26e0c90> has no local changes
2026-08-19 09:35:18,632 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:35:19,066 [ scc.git] DEBUG [detached HEAD b936138] merge master -Dorg -Snone
2026-08-19 09:35:19,068 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-19 09:35:19,068 [ scc.merge] INFO Already up to date.
2026-08-19 09:35:19,068 [ scc.merge] INFO
2026-08-19 09:35:19,068 [ scc.merge] INFO Merged PRs:
2026-08-19 09:35:19,068 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-19 09:35:19,068 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-19 09:35:19,068 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-19 09:35:19,068 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-19 09:35:19,068 [ scc.merge] INFO
2026-08-19 09:35:19,068 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-19 09:35:19,068 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '5d0974d097e25d98892b9b419528edf9256274b0'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out '116a77766563756a351f2ec3f6cf98550c7f2cc8'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-19 09:35:25,929 [ scc.config] DEBUG Found github.token
2026-08-19 09:35:25,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-19 09:35:26,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:26,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:27,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-19 09:35:27,194 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 10:08
2026-08-19 09:35:27,194 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:27,204 [ scc.git] DEBUG Check current status
2026-08-19 09:35:27,205 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:27,222 [ scc.git] DEBUG b936138 merge master -Dorg -Snone
2026-08-19 09:35:27,222 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:27,345 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-19 09:35:27,377 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-08-19 09:35:27,427 [ scc.git] DEBUG +5d0974d097e25d98892b9b419528edf9256274b0 omero-py (v5.23.0-6-g5d0974d0)
2026-08-19 09:35:27,460 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-08-19 09:35:27,502 [ scc.git] DEBUG +116a77766563756a351f2ec3f6cf98550c7f2cc8 omero-web (v5.32.0-12-g116a77766)
2026-08-19 09:35:27,514 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:27,515 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-08-19 09:35:27,518 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-19 09:35:27,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-19 09:35:28,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:28,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:29,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:29,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:29,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:29,982 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-19 09:35:29,982 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:29,996 [ scc.git] DEBUG Check current status
2026-08-19 09:35:29,996 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:30,017 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-08-19 09:35:30,018 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:30,129 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:30,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-08-19 09:35:30,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:31,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:31,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:32,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:32,396 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:32,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:35:32,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-19 09:35:32,512 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:32,524 [ scc.git] DEBUG Check current status
2026-08-19 09:35:32,524 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:32,546 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-08-19 09:35:32,547 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:32,654 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:32,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-08-19 09:35:33,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:33,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:34,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:34,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:34,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:34,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:35:34,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-19 09:35:34,959 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:34,971 [ scc.git] DEBUG Check current status
2026-08-19 09:35:34,971 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:34,994 [ scc.git] DEBUG 5d0974d0 Merge pull request #498 from sbesson/actions_upgrade
2026-08-19 09:35:34,995 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:35,107 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:35,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-08-19 09:35:35,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:36,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:37,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:37,365 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:37,465 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:35:37,466 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-19 09:35:37,466 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:37,478 [ scc.git] DEBUG Check current status
2026-08-19 09:35:37,478 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:37,497 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-08-19 09:35:37,498 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:37,602 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:37,603 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-08-19 09:35:37,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-08-19 09:35:38,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:38,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:39,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:39,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:39,942 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:40,047 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:35:40,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-19 09:35:40,048 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-19 09:35:40,061 [ scc.git] DEBUG Check current status
2026-08-19 09:35:40,061 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:40,089 [ scc.git] DEBUG 116a77766 Merge pull request #683 from will-moore/post_data_saveImgRDef
2026-08-19 09:35:40,090 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:40,199 [ scc.config] DEBUG Found remote.origin.url
2026-08-19 09:35:40,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-08-19 09:35:41,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-19 09:35:41,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-19 09:35:42,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-19 09:35:42,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-19 09:35:42,488 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:35:42,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:35:42,598 [ scc.git] DEBUG Resetting...
2026-08-19 09:35:42,598 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-19 09:35:42,745 [ scc.git] DEBUG HEAD is now at b936138 merge master -Dorg -Snone
2026-08-19 09:35:42,745 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-19 09:35:43,160 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-19 09:35:43,693 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-19 09:35:44,006 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-08-19 09:35:45,078 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-19 09:35:45,098 [ scc.git] DEBUG Check current status
2026-08-19 09:35:45,098 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-19 09:35:45,115 [ scc.git] DEBUG b936138 merge master -Dorg -Snone
2026-08-19 09:35:45,116 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-19 09:35:45,247 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-19 09:35:45,281 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-08-19 09:35:45,321 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-08-19 09:35:45,349 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-19 09:35:45,369 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-08-19 09:35:45,370 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-19 09:35:45,370 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-19 09:35:45,370 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-19 09:35:45,370 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-19 09:35:45,370 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-19 09:35:45,370 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-08-19 09:35:45,370 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:35:45,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-19 09:35:46,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-19 09:35:46,242 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:47,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:48,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:35:48,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:48,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:35:48,984 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-19 09:35:49,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-19 09:35:49,494 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:50,378 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:50,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:35:51,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:51,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:35:51,869 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-19 09:35:52,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-19 09:35:52,370 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:53,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:53,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:35:54,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:54,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:35:54,578 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-19 09:35:55,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-19 09:35:55,173 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-19 09:35:55,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:56,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:35:56,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-19 09:35:57,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:35:57,380 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-19 09:35:57,380 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:35:57,380 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:35:57,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:57,391 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:35:57,405 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:35:57,405 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:35:57,429 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:35:57,481 [ scc.git] DEBUG Already up to date.
2026-08-19 09:35:57,481 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-19 09:35:57,958 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:57,958 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-19 09:35:57,985 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-19 09:35:58,468 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:58,469 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-19 09:35:58,493 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-19 09:35:58,977 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:58,977 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-19 09:35:59,001 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-19 09:35:59,475 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-19 09:35:59,475 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-19 09:35:59,501 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:35:59,501 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:35:59,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:59,513 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-19 09:35:59,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:59,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-19 09:35:59,598 [ scc.git] DEBUG Already up to date.
2026-08-19 09:35:59,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:35:59,806 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-19 09:35:59,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:35:59,840 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-19 09:35:59,897 [ scc.git] DEBUG Already up to date.
2026-08-19 09:36:00,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:00,255 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-19 09:36:00,279 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:00,288 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-19 09:36:00,332 [ scc.git] DEBUG Already up to date.
2026-08-19 09:36:00,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:00,698 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-19 09:36:00,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:00,731 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-19 09:36:00,778 [ scc.git] DEBUG Already up to date.
2026-08-19 09:36:01,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:01,141 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:36:01,422 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:01,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:01,431 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:36:01,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-08-19 09:36:01,666 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:36:01,666 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-19 09:36:01,666 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:01,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:01,681 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:36:01,696 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:36:01,696 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:36:01,717 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:36:01,775 [ scc.git] DEBUG Already up to date.
2026-08-19 09:36:01,775 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:36:01,775 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:01,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:01,788 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:36:01,895 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:01,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:01,909 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:36:02,008 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:36:02,057 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35cde190> has no local changes
2026-08-19 09:36:02,057 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:36:02,205 [ scc.git] DEBUG [detached HEAD f3757b5] merge master -Dorg -Ssuccess-only
2026-08-19 09:36:02,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:36:02,207 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:36:02,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-08-19 09:36:03,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-08-19 09:36:03,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-08-19 09:36:04,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-08-19 09:36:04,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-08-19 09:36:05,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-08-19 09:36:05,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-08-19 09:36:05,641 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:36:05,642 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-19 09:36:05,642 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:05,642 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:05,656 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:36:05,673 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:36:05,673 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:36:05,699 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:36:05,948 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-08-19 09:36:06,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-08-19 09:36:07,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-08-19 09:36:08,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-08-19 09:36:09,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-08-19 09:36:09,270 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:36:09,270 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:09,270 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:09,313 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:36:09,428 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:09,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:09,441 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:36:09,535 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:36:09,639 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35cf1ed0> has no local changes
2026-08-19 09:36:09,639 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:36:09,800 [ scc.git] DEBUG [detached HEAD 8293181] merge master -Dorg -Ssuccess-only
2026-08-19 09:36:09,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:36:09,802 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:36:10,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-08-19 09:36:10,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489 HTTP/1.1" 200 None
2026-08-19 09:36:11,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489/comments HTTP/1.1" 200 None
2026-08-19 09:36:11,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:12,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:12,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:36:13,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:13,849 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0ed10d16c415331749fc72190209994955676c2e?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:14,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:14,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0ed10d16c415331749fc72190209994955676c2e/status HTTP/1.1" 200 None
2026-08-19 09:36:14,824 [ scc.repo] DEBUG - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-19 09:36:15,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-08-19 09:36:15,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-08-19 09:36:16,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-08-19 09:36:16,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-08-19 09:36:17,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-08-19 09:36:17,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-08-19 09:36:18,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:18,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:19,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:19,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:36:19,875 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-08-19 09:36:19,875 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:36:19,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-19 09:36:19,876 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:19,876 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:19,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:36:19,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:36:19,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:36:20,187 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:36:20,754 [ scc.git] DEBUG Updating b44120b5..5d0974d0
2026-08-19 09:36:21,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-08-19 09:36:22,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-08-19 09:36:23,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-08-19 09:36:24,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-08-19 09:36:24,859 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-08-19 09:36:25,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-08-19 09:36:26,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-08-19 09:36:27,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-08-19 09:36:28,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-08-19 09:36:28,148 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-08-19 09:36:28,792 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-19 09:36:28,792 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-08-19 09:36:28,814 [ scc.git] DEBUG Calling 'git fetch origin pull/489/head'
2026-08-19 09:36:31,485 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-19 09:36:31,486 [ scc.git] DEBUG * branch refs/pull/489/head -> FETCH_HEAD
2026-08-19 09:36:31,515 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:36:31,515 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:31,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:31,528 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-08-19 09:36:31,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:31,587 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-08-19 09:36:31,965 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-08-19 09:36:32,033 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:36:32,100 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-08-19 09:36:32,100 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-08-19 09:36:32,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:32,301 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0ed10d16c415331749fc72190209994955676c2e'
2026-08-19 09:36:32,346 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:32,357 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 489 (Add more opts support for getObjects('Annotation')) 0ed10d16c415331749fc72190209994955676c2e'
2026-08-19 09:36:32,678 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-08-19 09:36:32,741 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:36:32,807 [ scc.git] DEBUG src/omero/gateway/__init__.py | 266 +++++++++++++++---------------------------
2026-08-19 09:36:32,807 [ scc.git] DEBUG 1 file changed, 93 insertions(+), 173 deletions(-)
2026-08-19 09:36:32,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:32,999 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:36:33,106 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:33,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:33,117 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:36:33,209 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:36:33,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35f5a190> has no local changes
2026-08-19 09:36:33,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:36:33,418 [ scc.git] DEBUG [detached HEAD 42b94509] merge master -Dorg -Ssuccess-only
2026-08-19 09:36:33,420 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:36:33,420 [ scc.git] INFO Overriding base-branch from master to develop
2026-08-19 09:36:33,420 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:36:33,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-08-19 09:36:34,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-08-19 09:36:35,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:35,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:36,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:36:36,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:37,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:36:37,057 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-19 09:36:37,058 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:36:37,058 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-19 09:36:37,058 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:37,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:37,074 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-08-19 09:36:37,094 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:36:37,094 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-08-19 09:36:37,116 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-08-19 09:36:37,381 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-08-19 09:36:37,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-08-19 09:36:38,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-08-19 09:36:39,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-08-19 09:36:40,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-08-19 09:36:40,696 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-08-19 09:36:41,424 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-08-19 09:36:41,424 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-08-19 09:36:41,450 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:36:41,450 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:41,450 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:41,465 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-08-19 09:36:41,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:41,512 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-08-19 09:36:41,740 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:36:41,810 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-08-19 09:36:41,810 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-08-19 09:36:42,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:36:42,007 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:36:42,125 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:36:42,125 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:36:42,139 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:36:42,255 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:36:42,323 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35e8c950> has no local changes
2026-08-19 09:36:42,323 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:36:42,527 [ scc.git] DEBUG [detached HEAD db54320] merge master -Dorg -Ssuccess-only
2026-08-19 09:36:42,529 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:36:42,529 [ scc.repo] DEBUG ## PRs found:
2026-08-19 09:36:42,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-08-19 09:36:43,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/685 HTTP/1.1" 200 None
2026-08-19 09:36:43,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:44,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:45,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:36:45,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:46,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/72461e7c571d3d45c668c1827baaa562eb007630?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:46,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:46,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/status HTTP/1.1" 200 None
2026-08-19 09:36:46,982 [ scc.repo] DEBUG - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-19 09:36:47,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-08-19 09:36:48,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-08-19 09:36:48,025 [ scc.repo] DEBUG # ... Include label: include
2026-08-19 09:36:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:49,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:49,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:36:50,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:50,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:51,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:51,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-08-19 09:36:51,638 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-19 09:36:52,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-08-19 09:36:52,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-08-19 09:36:52,678 [ scc.repo] DEBUG # ... Exclude label: exclude
2026-08-19 09:36:53,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-08-19 09:36:53,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-08-19 09:36:54,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:54,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:55,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:36:55,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:56,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:36:56,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:57,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-08-19 09:36:57,338 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-19 09:36:57,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-08-19 09:36:58,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-08-19 09:36:58,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-19 09:36:59,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:00,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:37:00,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:00,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:01,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:01,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-08-19 09:37:01,921 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-19 09:37:02,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-08-19 09:37:02,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-08-19 09:37:03,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:04,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:04,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:37:05,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:05,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:06,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:06,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-08-19 09:37:06,550 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-19 09:37:07,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-08-19 09:37:07,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-08-19 09:37:08,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-08-19 09:37:08,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-08-19 09:37:09,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:09,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:10,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-19 09:37:10,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:11,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:11,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:12,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-08-19 09:37:12,275 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-08-19 09:37:12,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-08-19 09:37:13,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-08-19 09:37:13,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:14,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-19 09:37:14,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-19 09:37:15,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-08-19 09:37:15,327 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-19 09:37:15,327 [ scc.repo] DEBUG ## Branches found:
2026-08-19 09:37:15,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-19 09:37:15,328 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:37:15,328 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:15,357 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-19 09:37:15,376 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-19 09:37:15,376 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-19 09:37:16,301 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-19 09:37:17,372 [ scc.git] DEBUG Updating 675d57fd7..116a77766
2026-08-19 09:37:17,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-08-19 09:37:18,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-08-19 09:37:19,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-08-19 09:37:20,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-08-19 09:37:21,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-08-19 09:37:22,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-08-19 09:37:23,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-08-19 09:37:23,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-08-19 09:37:24,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-08-19 09:37:25,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-08-19 09:37:26,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-08-19 09:37:26,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-08-19 09:37:27,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-08-19 09:37:28,598 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-08-19 09:37:29,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-08-19 09:37:30,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-08-19 09:37:31,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-08-19 09:37:32,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-08-19 09:37:32,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-08-19 09:37:33,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-08-19 09:37:34,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-08-19 09:37:35,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-08-19 09:37:36,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-08-19 09:37:37,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-08-19 09:37:37,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-08-19 09:37:38,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-08-19 09:37:39,559 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-08-19 09:37:40,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-08-19 09:37:41,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-08-19 09:37:42,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-08-19 09:37:42,101 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-08-19 09:37:42,677 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:42,678 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-08-19 09:37:42,700 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-08-19 09:37:43,347 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:43,347 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-08-19 09:37:43,368 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-08-19 09:37:43,983 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:43,983 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-08-19 09:37:44,011 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-08-19 09:37:44,622 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:44,622 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-08-19 09:37:44,649 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-08-19 09:37:45,225 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:45,225 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-08-19 09:37:45,249 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-08-19 09:37:45,884 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:45,884 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-08-19 09:37:45,919 [ scc.git] DEBUG Calling 'git fetch origin pull/685/head'
2026-08-19 09:37:46,428 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-19 09:37:46,428 [ scc.git] DEBUG * branch refs/pull/685/head -> FETCH_HEAD
2026-08-19 09:37:46,449 [ scc.git] DEBUG ## Unique users: []
2026-08-19 09:37:46,449 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:37:46,449 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:46,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-19 09:37:46,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:46,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-19 09:37:47,017 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-08-19 09:37:47,092 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:47,189 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-08-19 09:37:47,189 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-08-19 09:37:47,189 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-08-19 09:37:47,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:47,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-19 09:37:47,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:47,500 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-19 09:37:47,849 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-08-19 09:37:47,849 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-19 09:37:47,927 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:48,010 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-08-19 09:37:48,010 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-08-19 09:37:48,010 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-08-19 09:37:48,010 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-08-19 09:37:48,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:48,188 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-19 09:37:48,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:48,270 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-19 09:37:48,694 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-19 09:37:48,764 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:48,867 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-08-19 09:37:48,867 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-08-19 09:37:48,867 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-08-19 09:37:48,867 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-08-19 09:37:49,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:49,051 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-19 09:37:49,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:49,127 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-19 09:37:49,361 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:49,419 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-08-19 09:37:49,419 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-08-19 09:37:49,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:49,612 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-19 09:37:49,685 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:49,699 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-19 09:37:49,959 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-19 09:37:50,035 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:50,099 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-08-19 09:37:50,099 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-08-19 09:37:50,099 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-08-19 09:37:50,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:50,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-19 09:37:50,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:50,372 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-19 09:37:50,675 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:50,743 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-08-19 09:37:50,743 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-08-19 09:37:50,743 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-08-19 09:37:50,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:50,955 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-19 09:37:51,046 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:51,061 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 685 (Prepare chgrp 'update' response before chgrp submission) 72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-19 09:37:51,275 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-19 09:37:51,355 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-19 09:37:51,424 [ scc.git] DEBUG omeroweb/webclient/views.py | 80 +++++++++++++++++++++++----------------------
2026-08-19 09:37:51,424 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 39 deletions(-)
2026-08-19 09:37:51,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:51,638 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-19 09:37:51,757 [ scc.git] DEBUG Get sha1 of %s
2026-08-19 09:37:51,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-19 09:37:51,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:37:51,863 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:37:51,986 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35fa4e90> has no local changes
2026-08-19 09:37:51,986 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint' (label: exclude)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:37:52,188 [ scc.git] DEBUG [detached HEAD 6de07acf1] merge master -Dorg -Ssuccess-only
2026-08-19 09:37:52,190 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:37:52,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-19 09:37:52,305 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-08-19 09:37:52,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:52,532 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-08-19 09:37:52,941 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:52,970 [ scc.config] DEBUG Found submodule.omero-py.url
2026-08-19 09:37:53,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:53,398 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-08-19 09:37:53,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:53,853 [ scc.config] DEBUG Found submodule.omero-web.url
2026-08-19 09:37:54,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-19 09:37:54,294 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-19 09:37:54,930 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f2c35fb0810> has local changes
2026-08-19 09:37:54,930 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint' (label: exclude)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#45 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/45/)'
2026-08-19 09:37:55,233 [ scc.git] DEBUG [detached HEAD f837b98] merge master -Dorg -Ssuccess-only
2026-08-19 09:37:55,233 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-08-19 09:37:55,235 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-19 09:37:55,235 [ scc.merge] INFO Already up to date.
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO Merged PRs:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-08-19 09:37:55,235 [ scc.merge] INFO Already up to date.
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO Repository: ome/omero-marshal
2026-08-19 09:37:55,235 [ scc.merge] INFO Excluded PRs:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-08-19 09:37:55,235 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-08-19 09:37:55,235 [ scc.merge] INFO Previously merged:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO Repository: ome/omero-py
2026-08-19 09:37:55,235 [ scc.merge] INFO Excluded PRs:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2026-08-19 09:37:55,235 [ scc.merge] INFO Updating b44120b5..5d0974d0
2026-08-19 09:37:55,235 [ scc.merge] INFO Previously merged:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,235 [ scc.merge] INFO Merged PRs:
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-08-19 09:37:55,235 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-19 09:37:55,235 [ scc.merge] INFO
2026-08-19 09:37:55,236 [ scc.merge] INFO Repository: ome/omero-scripts
2026-08-19 09:37:55,236 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-08-19 09:37:55,236 [ scc.merge] INFO Previously merged:
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-08-19 09:37:55,236 [ scc.merge] INFO
2026-08-19 09:37:55,236 [ scc.merge] INFO Merged PRs:
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-19 09:37:55,236 [ scc.merge] INFO
2026-08-19 09:37:55,236 [ scc.merge] INFO Repository: ome/omero-web
2026-08-19 09:37:55,236 [ scc.merge] INFO Excluded PRs:
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint' (label: exclude)
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-08-19 09:37:55,236 [ scc.merge] INFO Updating 675d57fd7..116a77766
2026-08-19 09:37:55,236 [ scc.merge] INFO Previously merged:
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-08-19 09:37:55,236 [ scc.merge] INFO
2026-08-19 09:37:55,236 [ scc.merge] INFO Merged PRs:
2026-08-19 09:37:55,236 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-19 09:37:55,237 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-19 09:37:55,237 [ scc.merge] INFO
2026-08-19 09:37:55,237 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-19 09:37:55,237 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-19 09:37:55,290 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:37:55,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-19 09:37:55,308 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:37:55,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-19 09:37:55,323 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:37:55,337 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-19 09:37:55,337 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-19 09:37:55,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-19 09:37:55,351 [ scc.git] DEBUG Calling 'git remote'
2026-08-19 09:37:55,366 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
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grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-08-19 09:38:34,911 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
