Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-08-21 01:15:03,933 [ scc.config] DEBUG Found github.token
2026-08-21 01:15:03,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-21 01:15:04,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:04,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:05,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-21 01:15:05,074 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-21 01:15:05,074 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:05,084 [ scc.git] DEBUG Check current status
2026-08-21 01:15:05,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:05,105 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 01:15:05,106 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:05,257 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-21 01:15:05,317 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-21 01:15:05,386 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-21 01:15:05,428 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 01:15:05,456 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-21 01:15:05,470 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:05,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-21 01:15:06,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:06,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:07,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:07,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:07,722 [ scc.git] DEBUG Resetting...
2026-08-21 01:15:07,723 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-21 01:15:07,870 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 01:15:07,871 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-21 01:15:08,262 [ scc.git] DEBUG Check current status
2026-08-21 01:15:08,262 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:08,281 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 01:15:08,282 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:08,407 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-21 01:15:08,437 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-21 01:15:08,479 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-21 01:15:08,508 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 01:15:08,529 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-21 01:15:08,530 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-21 01:15:08,530 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-21 01:15:08,530 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-21 01:15:08,530 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-21 01:15:08,530 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-21 01:15:08,530 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:15:08,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-21 01:15:09,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-21 01:15:09,385 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:09,385 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 01:15:10,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-21 01:15:10,047 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:10,047 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 01:15:10,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-21 01:15:10,591 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:10,591 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 01:15:11,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-21 01:15:11,115 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:11,115 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 01:15:11,115 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:15:11,115 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:15:11,115 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:11,129 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:15:11,150 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:15:11,150 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:15:11,169 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:15:11,227 [ scc.git] DEBUG Already up to date.
2026-08-21 01:15:11,227 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-21 01:15:12,455 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:15:12,455 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-21 01:15:12,482 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-21 01:15:13,425 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:15:13,425 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-21 01:15:13,452 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-21 01:15:15,156 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:15:15,156 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-21 01:15:15,177 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-21 01:15:15,885 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:15:15,885 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-21 01:15:15,911 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:15:15,911 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:15:15,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:15,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 01:15:15,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:15,952 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 01:15:16,203 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:15:16,274 [ scc.git] DEBUG omero-marshal | 2 +-
2026-08-21 01:15:16,274 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 01:15:16,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:16,624 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 01:15:16,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:16,653 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 01:15:16,961 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:15:17,020 [ scc.git] DEBUG omero-web | 2 +-
2026-08-21 01:15:17,020 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 01:15:17,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:17,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 01:15:17,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:17,258 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 01:15:17,575 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:15:17,638 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-08-21 01:15:17,638 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 01:15:17,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:17,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 01:15:17,861 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:17,871 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 01:15:18,188 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:15:18,238 [ scc.git] DEBUG omero-py | 2 +-
2026-08-21 01:15:18,238 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 01:15:18,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:18,431 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:15:18,773 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-08-21 01:15:19,080 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-21 01:15:19,608 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-21 01:15:20,386 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-21 01:15:20,387 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:15:20,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:15:20,397 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:15:21,151 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9741295510> has no local changes
2026-08-21 01:15:21,151 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:15:21,589 [ scc.git] DEBUG [detached HEAD 98bcdd0] merge master -Dorg -Snone
2026-08-21 01:15:21,591 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-21 01:15:21,591 [ scc.merge] INFO Already up to date.
2026-08-21 01:15:21,591 [ scc.merge] INFO
2026-08-21 01:15:21,591 [ scc.merge] INFO Merged PRs:
2026-08-21 01:15:21,591 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 01:15:21,591 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 01:15:21,591 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 01:15:21,591 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 01:15:21,591 [ scc.merge] INFO
2026-08-21 01:15:21,591 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-21 01:15:21,591 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '5d0974d097e25d98892b9b419528edf9256274b0'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out '116a77766563756a351f2ec3f6cf98550c7f2cc8'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-21 01:15:28,813 [ scc.config] DEBUG Found github.token
2026-08-21 01:15:28,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-21 01:15:29,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:29,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:15:29,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-21 01:15:29,906 [ scc.gh] DEBUG 4999 remaining from 5000 (Reset at 02:08
2026-08-21 01:15:29,907 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:29,919 [ scc.git] DEBUG Check current status
2026-08-21 01:15:29,919 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:29,942 [ scc.git] DEBUG 98bcdd0 merge master -Dorg -Snone
2026-08-21 01:15:29,942 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:30,080 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-21 01:15:30,120 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-08-21 01:15:30,171 [ scc.git] DEBUG +5d0974d097e25d98892b9b419528edf9256274b0 omero-py (v5.23.0-6-g5d0974d0)
2026-08-21 01:15:30,207 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-08-21 01:15:30,247 [ scc.git] DEBUG +116a77766563756a351f2ec3f6cf98550c7f2cc8 omero-web (v5.32.0-12-g116a77766)
2026-08-21 01:15:30,285 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:30,285 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-08-21 01:15:30,288 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-21 01:15:30,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-21 01:15:31,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:31,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:32,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:32,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:32,517 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:32,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 01:15:32,644 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:32,658 [ scc.git] DEBUG Check current status
2026-08-21 01:15:32,658 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:32,680 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-08-21 01:15:32,681 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:32,819 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:33,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-08-21 01:15:33,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:34,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:34,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:35,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:35,166 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:35,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:15:35,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 01:15:35,271 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:35,281 [ scc.git] DEBUG Check current status
2026-08-21 01:15:35,281 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:35,300 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-08-21 01:15:35,301 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:35,407 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:35,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-08-21 01:15:36,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:36,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:37,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:37,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:37,772 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:37,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:15:37,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 01:15:37,899 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:37,914 [ scc.git] DEBUG Check current status
2026-08-21 01:15:37,914 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:37,947 [ scc.git] DEBUG 5d0974d0 Merge pull request #498 from sbesson/actions_upgrade
2026-08-21 01:15:37,948 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:38,075 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:38,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-08-21 01:15:38,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:39,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:39,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:40,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:40,288 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:40,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:15:40,407 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 01:15:40,407 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:40,423 [ scc.git] DEBUG Check current status
2026-08-21 01:15:40,423 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:40,446 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-08-21 01:15:40,447 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:40,556 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:40,557 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-08-21 01:15:40,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-08-21 01:15:41,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:41,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:42,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:42,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:42,756 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:42,864 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:15:42,865 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 01:15:42,865 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 01:15:42,877 [ scc.git] DEBUG Check current status
2026-08-21 01:15:42,877 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:42,902 [ scc.git] DEBUG 116a77766 Merge pull request #683 from will-moore/post_data_saveImgRDef
2026-08-21 01:15:42,903 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:43,009 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 01:15:43,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-08-21 01:15:43,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 01:15:44,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 01:15:44,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 01:15:45,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 01:15:45,297 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:15:45,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:15:45,415 [ scc.git] DEBUG Resetting...
2026-08-21 01:15:45,415 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-21 01:15:45,584 [ scc.git] DEBUG HEAD is now at 98bcdd0 merge master -Dorg -Snone
2026-08-21 01:15:45,585 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-21 01:15:46,053 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-21 01:15:46,599 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-21 01:15:46,941 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-08-21 01:15:47,956 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-21 01:15:47,988 [ scc.git] DEBUG Check current status
2026-08-21 01:15:47,988 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 01:15:48,012 [ scc.git] DEBUG 98bcdd0 merge master -Dorg -Snone
2026-08-21 01:15:48,013 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 01:15:48,175 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-21 01:15:48,222 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-08-21 01:15:48,283 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-08-21 01:15:48,325 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 01:15:48,357 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-08-21 01:15:48,358 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-21 01:15:48,358 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-21 01:15:48,358 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-21 01:15:48,358 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-21 01:15:48,358 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-21 01:15:48,358 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-08-21 01:15:48,358 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:15:48,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-21 01:15:49,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-21 01:15:49,188 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:50,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:50,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:15:51,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:51,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:15:51,604 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 01:15:52,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-21 01:15:52,099 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:52,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:53,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:15:53,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:54,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:15:54,450 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 01:15:54,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-21 01:15:54,995 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:55,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:56,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:15:56,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:57,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:15:57,300 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 01:15:57,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-21 01:15:57,846 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 01:15:58,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-21 01:15:59,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:15:59,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:00,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:16:00,314 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 01:16:00,314 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:16:00,314 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:00,314 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:00,327 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:16:00,342 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:16:00,343 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:16:00,365 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:16:00,415 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:00,415 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-21 01:16:00,879 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:16:00,879 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-21 01:16:00,904 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-21 01:16:01,391 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:16:01,391 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-21 01:16:01,417 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-21 01:16:01,884 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:16:01,884 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-21 01:16:01,910 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-21 01:16:02,418 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 01:16:02,418 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-21 01:16:02,446 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:16:02,446 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:02,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:02,458 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 01:16:02,485 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:02,495 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 01:16:02,555 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:02,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:02,741 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 01:16:02,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:02,784 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 01:16:02,839 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:03,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:03,329 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 01:16:03,354 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:03,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 01:16:03,411 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:03,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:03,770 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 01:16:03,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:03,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 01:16:03,849 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:04,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:04,213 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:16:04,443 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:04,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:04,455 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:16:04,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-08-21 01:16:04,694 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:16:04,694 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 01:16:04,694 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:04,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:04,713 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:16:04,734 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:16:04,734 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:16:04,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:16:04,825 [ scc.git] DEBUG Already up to date.
2026-08-21 01:16:04,826 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:16:04,826 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:04,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:04,843 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:16:04,980 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:04,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:04,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:16:05,114 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:16:05,165 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a29896150> has no local changes
2026-08-21 01:16:05,166 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:16:05,312 [ scc.git] DEBUG [detached HEAD 2661795] merge master -Dorg -Ssuccess-only
2026-08-21 01:16:05,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:16:05,315 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:16:05,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-08-21 01:16:06,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-08-21 01:16:06,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-08-21 01:16:07,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-08-21 01:16:07,739 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-08-21 01:16:08,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-08-21 01:16:08,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-08-21 01:16:08,713 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:16:08,714 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 01:16:08,714 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:08,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:08,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:16:08,749 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:16:08,749 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:16:08,776 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:16:09,056 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-08-21 01:16:09,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-08-21 01:16:10,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-08-21 01:16:11,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-08-21 01:16:12,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-08-21 01:16:12,666 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:16:12,666 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:12,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:12,699 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:16:12,827 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:12,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:12,846 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:16:12,964 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:16:13,091 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a28a48090> has no local changes
2026-08-21 01:16:13,091 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:16:13,210 [ scc.git] DEBUG [detached HEAD 71af118] merge master -Dorg -Ssuccess-only
2026-08-21 01:16:13,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:16:13,212 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:16:13,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-08-21 01:16:14,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489 HTTP/1.1" 200 None
2026-08-21 01:16:14,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489/comments HTTP/1.1" 200 None
2026-08-21 01:16:15,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:15,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:16,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:16:16,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:17,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/8c32997d08c160d27b11ac793d2e887b36ca5104?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:17,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:18,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/8c32997d08c160d27b11ac793d2e887b36ca5104/status HTTP/1.1" 200 None
2026-08-21 01:16:18,044 [ scc.repo] DEBUG - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-21 01:16:18,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-08-21 01:16:19,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-08-21 01:16:19,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-08-21 01:16:20,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-08-21 01:16:20,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-08-21 01:16:21,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-08-21 01:16:21,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:22,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:22,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:23,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:16:23,323 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-08-21 01:16:23,323 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:16:23,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 01:16:23,324 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:23,324 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:23,343 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:16:23,365 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:16:23,365 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:16:23,433 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:16:23,997 [ scc.git] DEBUG Updating b44120b5..5d0974d0
2026-08-21 01:16:24,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-08-21 01:16:25,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-08-21 01:16:26,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-08-21 01:16:27,302 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-08-21 01:16:28,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-08-21 01:16:29,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-08-21 01:16:29,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-08-21 01:16:31,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-08-21 01:16:32,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-08-21 01:16:32,148 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-08-21 01:16:32,795 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-21 01:16:32,795 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-08-21 01:16:32,829 [ scc.git] DEBUG Calling 'git fetch origin pull/489/head'
2026-08-21 01:16:33,784 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-21 01:16:33,784 [ scc.git] DEBUG * branch refs/pull/489/head -> FETCH_HEAD
2026-08-21 01:16:33,812 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:16:33,812 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:33,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:33,824 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-08-21 01:16:33,881 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:33,894 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-08-21 01:16:34,252 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-08-21 01:16:34,336 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:16:34,426 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-08-21 01:16:34,426 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-08-21 01:16:34,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:34,617 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8c32997d08c160d27b11ac793d2e887b36ca5104'
2026-08-21 01:16:34,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:34,695 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 489 (Add more opts support for getObjects('Annotation')) 8c32997d08c160d27b11ac793d2e887b36ca5104'
2026-08-21 01:16:35,028 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-08-21 01:16:35,099 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:16:35,193 [ scc.git] DEBUG src/omero/gateway/__init__.py | 285 ++++++++++++++++--------------------------
2026-08-21 01:16:35,193 [ scc.git] DEBUG 1 file changed, 105 insertions(+), 180 deletions(-)
2026-08-21 01:16:35,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:35,558 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:16:35,697 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:35,697 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:35,711 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:16:35,841 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:16:35,938 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a28762dd0> has no local changes
2026-08-21 01:16:35,938 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:16:36,103 [ scc.git] DEBUG [detached HEAD 7119c9e8] merge master -Dorg -Ssuccess-only
2026-08-21 01:16:36,105 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:16:36,105 [ scc.git] INFO Overriding base-branch from master to develop
2026-08-21 01:16:36,105 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:16:36,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-08-21 01:16:36,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-08-21 01:16:37,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:38,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:38,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:16:39,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:39,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:16:39,710 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-21 01:16:39,711 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:16:39,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 01:16:39,711 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:39,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:39,726 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-08-21 01:16:39,742 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:16:39,742 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-08-21 01:16:39,764 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-08-21 01:16:40,016 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-08-21 01:16:40,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-08-21 01:16:41,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-08-21 01:16:42,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-08-21 01:16:42,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-08-21 01:16:42,995 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-08-21 01:16:43,752 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-08-21 01:16:43,752 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-08-21 01:16:43,783 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:16:43,783 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:43,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:43,802 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-08-21 01:16:43,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:43,859 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-08-21 01:16:44,103 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:16:44,174 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-08-21 01:16:44,174 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-08-21 01:16:44,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:16:44,358 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:16:44,488 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:16:44,489 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:16:44,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:16:44,619 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:16:44,691 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a28777950> has no local changes
2026-08-21 01:16:44,691 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:16:44,948 [ scc.git] DEBUG [detached HEAD 4639aa3] merge master -Dorg -Ssuccess-only
2026-08-21 01:16:44,950 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:16:44,950 [ scc.repo] DEBUG ## PRs found:
2026-08-21 01:16:45,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-08-21 01:16:45,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/685 HTTP/1.1" 200 None
2026-08-21 01:16:46,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:46,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:47,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:16:47,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:48,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/72461e7c571d3d45c668c1827baaa562eb007630?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:49,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:49,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/status HTTP/1.1" 200 None
2026-08-21 01:16:49,580 [ scc.repo] DEBUG - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-21 01:16:50,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-08-21 01:16:51,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-08-21 01:16:51,003 [ scc.repo] DEBUG # ... Include label: include
2026-08-21 01:16:51,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:52,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:52,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:16:53,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:53,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:54,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-08-21 01:16:54,588 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-21 01:16:55,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-08-21 01:16:55,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-08-21 01:16:56,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:56,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:57,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:16:57,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:58,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/54286f44fb13954e8e6d0f0dc3c069d4776756bf?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:16:58,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 01:16:59,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/status HTTP/1.1" 200 None
2026-08-21 01:16:59,128 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-21 01:16:59,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-08-21 01:17:00,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-08-21 01:17:00,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:01,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:01,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:17:02,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:02,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:03,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:03,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-08-21 01:17:03,667 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-21 01:17:04,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-08-21 01:17:04,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-08-21 01:17:05,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:05,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:06,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:17:07,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:07,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:08,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:08,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-08-21 01:17:08,725 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-21 01:17:09,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-08-21 01:17:09,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-08-21 01:17:10,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:10,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:11,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:17:11,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:12,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:12,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:13,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-08-21 01:17:13,453 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-21 01:17:13,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-08-21 01:17:14,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-08-21 01:17:15,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-08-21 01:17:15,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-08-21 01:17:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:16,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:17,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 01:17:17,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:18,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:18,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:19,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-08-21 01:17:19,255 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-08-21 01:17:19,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-08-21 01:17:20,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-08-21 01:17:21,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:21,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 01:17:22,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-21 01:17:22,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-08-21 01:17:22,643 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-21 01:17:22,644 [ scc.repo] DEBUG ## Branches found:
2026-08-21 01:17:22,644 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 01:17:22,645 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:17:22,645 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:22,668 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 01:17:22,691 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 01:17:22,691 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 01:17:22,815 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 01:17:24,054 [ scc.git] DEBUG Updating 675d57fd7..116a77766
2026-08-21 01:17:24,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-08-21 01:17:25,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-08-21 01:17:26,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-08-21 01:17:27,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-08-21 01:17:28,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-08-21 01:17:29,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-08-21 01:17:29,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-08-21 01:17:30,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-08-21 01:17:31,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-08-21 01:17:32,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-08-21 01:17:33,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-08-21 01:17:34,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-08-21 01:17:35,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-08-21 01:17:35,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-08-21 01:17:36,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-08-21 01:17:37,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-08-21 01:17:38,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-08-21 01:17:39,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-08-21 01:17:40,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-08-21 01:17:40,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-08-21 01:17:41,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-08-21 01:17:42,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-08-21 01:17:43,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-08-21 01:17:44,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-08-21 01:17:44,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-08-21 01:17:45,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-08-21 01:17:46,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-08-21 01:17:47,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-08-21 01:17:48,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-08-21 01:17:49,003 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-08-21 01:17:49,004 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-08-21 01:17:49,530 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:49,530 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-08-21 01:17:49,561 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-08-21 01:17:50,405 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:50,405 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-08-21 01:17:50,437 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-08-21 01:17:51,196 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:51,196 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-08-21 01:17:51,223 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-08-21 01:17:51,823 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:51,823 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-08-21 01:17:51,852 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-08-21 01:17:52,487 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:52,487 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-08-21 01:17:52,517 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-08-21 01:17:54,020 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:54,020 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-08-21 01:17:54,047 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-08-21 01:17:54,799 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:54,799 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-08-21 01:17:54,826 [ scc.git] DEBUG Calling 'git fetch origin pull/685/head'
2026-08-21 01:17:55,426 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 01:17:55,426 [ scc.git] DEBUG * branch refs/pull/685/head -> FETCH_HEAD
2026-08-21 01:17:55,453 [ scc.git] DEBUG ## Unique users: []
2026-08-21 01:17:55,453 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:17:55,453 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:55,468 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-21 01:17:55,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:55,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-21 01:17:56,070 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-08-21 01:17:56,114 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:56,181 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-08-21 01:17:56,181 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-08-21 01:17:56,181 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-08-21 01:17:56,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:17:56,367 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-21 01:17:56,425 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:56,439 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-21 01:17:56,823 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-08-21 01:17:56,823 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-21 01:17:56,882 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:56,962 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-08-21 01:17:56,962 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-08-21 01:17:56,962 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-08-21 01:17:56,962 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-08-21 01:17:57,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:17:57,141 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-21 01:17:57,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:57,231 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-21 01:17:57,695 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-21 01:17:57,771 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:57,870 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-08-21 01:17:57,870 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-08-21 01:17:57,870 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-08-21 01:17:57,870 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-08-21 01:17:58,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:17:58,059 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-21 01:17:58,127 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:58,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-21 01:17:58,400 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:58,464 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-08-21 01:17:58,464 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-08-21 01:17:58,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:17:58,817 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-21 01:17:58,894 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:58,907 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-21 01:17:59,161 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-21 01:17:59,230 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:59,311 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-08-21 01:17:59,311 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-08-21 01:17:59,311 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-08-21 01:17:59,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:17:59,502 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-21 01:17:59,596 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:17:59,612 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-21 01:17:59,911 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:17:59,992 [ scc.git] DEBUG omeroweb/api/urls.py | 22 +++++++++++
2026-08-21 01:17:59,992 [ scc.git] DEBUG omeroweb/api/views.py | 100 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-08-21 01:17:59,992 [ scc.git] DEBUG 2 files changed, 121 insertions(+), 1 deletion(-)
2026-08-21 01:18:00,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:00,182 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-21 01:18:00,294 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:18:00,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-21 01:18:00,654 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:18:00,727 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-08-21 01:18:00,727 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-08-21 01:18:00,727 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-08-21 01:18:00,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:00,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-21 01:18:01,022 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:18:01,036 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 685 (Prepare chgrp 'update' response before chgrp submission) 72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-21 01:18:01,322 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-21 01:18:01,385 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 01:18:01,446 [ scc.git] DEBUG omeroweb/webclient/views.py | 80 +++++++++++++++++++++++----------------------
2026-08-21 01:18:01,446 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 39 deletions(-)
2026-08-21 01:18:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:01,637 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 01:18:01,753 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 01:18:01,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 01:18:01,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:18:01,861 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:18:02,009 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a289c1350> has no local changes
2026-08-21 01:18:02,009 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:18:02,169 [ scc.git] DEBUG [detached HEAD 65c87736e] merge master -Dorg -Ssuccess-only
2026-08-21 01:18:02,171 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:18:02,171 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 01:18:02,288 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-08-21 01:18:02,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:02,520 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-08-21 01:18:02,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:02,957 [ scc.config] DEBUG Found submodule.omero-py.url
2026-08-21 01:18:03,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:03,544 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-08-21 01:18:03,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:03,986 [ scc.config] DEBUG Found submodule.omero-web.url
2026-08-21 01:18:04,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 01:18:04,425 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 01:18:05,110 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f4a288b0710> has local changes
2026-08-21 01:18:05,110 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#47 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/47/)'
2026-08-21 01:18:05,378 [ scc.git] DEBUG [detached HEAD 4952cde] merge master -Dorg -Ssuccess-only
2026-08-21 01:18:05,378 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-08-21 01:18:05,380 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-21 01:18:05,380 [ scc.merge] INFO Already up to date.
2026-08-21 01:18:05,380 [ scc.merge] INFO
2026-08-21 01:18:05,380 [ scc.merge] INFO Merged PRs:
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 01:18:05,380 [ scc.merge] INFO
2026-08-21 01:18:05,380 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-08-21 01:18:05,380 [ scc.merge] INFO Already up to date.
2026-08-21 01:18:05,380 [ scc.merge] INFO
2026-08-21 01:18:05,380 [ scc.merge] INFO
2026-08-21 01:18:05,380 [ scc.merge] INFO Repository: ome/omero-marshal
2026-08-21 01:18:05,380 [ scc.merge] INFO Excluded PRs:
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-08-21 01:18:05,380 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-08-21 01:18:05,381 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-08-21 01:18:05,381 [ scc.merge] INFO Previously merged:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO Repository: ome/omero-py
2026-08-21 01:18:05,381 [ scc.merge] INFO Excluded PRs:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2026-08-21 01:18:05,381 [ scc.merge] INFO Updating b44120b5..5d0974d0
2026-08-21 01:18:05,381 [ scc.merge] INFO Previously merged:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO Merged PRs:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO Repository: ome/omero-scripts
2026-08-21 01:18:05,381 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-08-21 01:18:05,381 [ scc.merge] INFO Previously merged:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO Merged PRs:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-21 01:18:05,381 [ scc.merge] INFO
2026-08-21 01:18:05,381 [ scc.merge] INFO Repository: ome/omero-web
2026-08-21 01:18:05,381 [ scc.merge] INFO Excluded PRs:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-08-21 01:18:05,381 [ scc.merge] INFO Updating 675d57fd7..116a77766
2026-08-21 01:18:05,381 [ scc.merge] INFO Previously merged:
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-08-21 01:18:05,381 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-08-21 01:18:05,382 [ scc.merge] INFO
2026-08-21 01:18:05,382 [ scc.merge] INFO Merged PRs:
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-21 01:18:05,382 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-21 01:18:05,382 [ scc.merge] INFO
2026-08-21 01:18:05,382 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-21 01:18:05,382 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 01:18:05,398 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:18:05,412 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 01:18:05,412 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:18:05,427 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 01:18:05,427 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:18:05,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 01:18:05,441 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 01:18:05,455 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 01:18:05,455 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 01:18:05,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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grep: build.gradle: No such file or directory
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Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-08-21 01:18:44,992 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
