Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-08-21 12:02:25,550 [ scc.config] DEBUG Found github.token
2026-08-21 12:02:25,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-21 12:02:25,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:26,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:26,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-21 12:02:26,670 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 13:08
2026-08-21 12:02:26,670 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:26,679 [ scc.git] DEBUG Check current status
2026-08-21 12:02:26,679 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:26,701 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 12:02:26,702 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:26,849 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-21 12:02:26,904 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-21 12:02:26,975 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-21 12:02:27,019 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 12:02:27,052 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-21 12:02:27,065 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:27,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-21 12:02:28,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:02:28,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:02:29,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:02:29,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:02:29,747 [ scc.git] DEBUG Resetting...
2026-08-21 12:02:29,747 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-21 12:02:29,883 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 12:02:29,884 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-21 12:02:30,203 [ scc.git] DEBUG Check current status
2026-08-21 12:02:30,203 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:30,219 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-08-21 12:02:30,220 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:30,333 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-08-21 12:02:30,363 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-08-21 12:02:30,409 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-08-21 12:02:30,445 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 12:02:30,472 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-08-21 12:02:30,473 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-21 12:02:30,473 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-21 12:02:30,473 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-21 12:02:30,473 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-21 12:02:30,473 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-21 12:02:30,473 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:02:30,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-21 12:02:31,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-21 12:02:31,408 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:02:31,408 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 12:02:31,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-21 12:02:31,939 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:02:31,939 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 12:02:32,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-21 12:02:32,482 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:02:32,482 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 12:02:33,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-21 12:02:33,020 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:02:33,020 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 12:02:33,020 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:02:33,021 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:02:33,021 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:33,032 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:02:33,046 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:02:33,046 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:02:33,062 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:02:33,108 [ scc.git] DEBUG Already up to date.
2026-08-21 12:02:33,108 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-21 12:02:33,593 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:02:33,594 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-21 12:02:33,618 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-21 12:02:34,086 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:02:34,087 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-21 12:02:34,112 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-21 12:02:34,757 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:02:34,758 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-21 12:02:34,776 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-21 12:02:35,236 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:02:35,236 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-21 12:02:35,257 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:02:35,257 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:02:35,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:35,267 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 12:02:35,283 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:35,291 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 12:02:35,505 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:02:35,576 [ scc.git] DEBUG omero-marshal | 2 +-
2026-08-21 12:02:35,576 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 12:02:35,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:35,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 12:02:35,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:35,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 12:02:36,041 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:02:36,094 [ scc.git] DEBUG omero-web | 2 +-
2026-08-21 12:02:36,094 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 12:02:36,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:36,281 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 12:02:36,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:36,314 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 12:02:36,596 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:02:36,648 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-08-21 12:02:36,648 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 12:02:36,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:36,837 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 12:02:36,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:36,873 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 12:02:37,207 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:02:37,266 [ scc.git] DEBUG omero-py | 2 +-
2026-08-21 12:02:37,266 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-08-21 12:02:37,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:37,471 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:02:37,795 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-08-21 12:02:38,035 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-21 12:02:38,683 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-21 12:02:39,546 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-21 12:02:39,547 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:02:39,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:02:39,560 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:02:40,400 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7936b71a50> has no local changes
2026-08-21 12:02:40,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:02:40,890 [ scc.git] DEBUG [detached HEAD 08dbb3a] merge master -Dorg -Snone
2026-08-21 12:02:40,891 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-21 12:02:40,891 [ scc.merge] INFO Already up to date.
2026-08-21 12:02:40,891 [ scc.merge] INFO
2026-08-21 12:02:40,891 [ scc.merge] INFO Merged PRs:
2026-08-21 12:02:40,891 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 12:02:40,891 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 12:02:40,891 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 12:02:40,891 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 12:02:40,891 [ scc.merge] INFO
2026-08-21 12:02:40,891 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-21 12:02:40,891 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '5d0974d097e25d98892b9b419528edf9256274b0'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out '116a77766563756a351f2ec3f6cf98550c7f2cc8'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-21 12:02:47,716 [ scc.config] DEBUG Found github.token
2026-08-21 12:02:47,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-08-21 12:02:47,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:48,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:02:48,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-08-21 12:02:48,826 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 13:08
2026-08-21 12:02:48,827 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:48,837 [ scc.git] DEBUG Check current status
2026-08-21 12:02:48,837 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:48,857 [ scc.git] DEBUG 08dbb3a merge master -Dorg -Snone
2026-08-21 12:02:48,858 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:48,995 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-21 12:02:49,029 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-08-21 12:02:49,078 [ scc.git] DEBUG +5d0974d097e25d98892b9b419528edf9256274b0 omero-py (v5.23.0-6-g5d0974d0)
2026-08-21 12:02:49,123 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-08-21 12:02:49,167 [ scc.git] DEBUG +116a77766563756a351f2ec3f6cf98550c7f2cc8 omero-web (v5.32.0-12-g116a77766)
2026-08-21 12:02:49,179 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:49,180 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-08-21 12:02:49,182 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-08-21 12:02:49,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-08-21 12:02:50,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:02:50,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:02:51,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:02:51,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:02:51,468 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:02:51,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 12:02:51,626 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:51,647 [ scc.git] DEBUG Check current status
2026-08-21 12:02:51,647 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:51,680 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-08-21 12:02:51,683 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:51,879 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:52,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-08-21 12:02:52,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:02:53,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:02:53,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:02:54,196 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:02:54,198 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:02:54,307 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:02:54,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 12:02:54,308 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:54,322 [ scc.git] DEBUG Check current status
2026-08-21 12:02:54,322 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:54,347 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-08-21 12:02:54,348 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:54,473 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:54,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-08-21 12:02:55,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:02:55,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:02:56,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:02:56,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:02:56,682 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:02:56,795 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:02:56,796 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 12:02:56,796 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:56,809 [ scc.git] DEBUG Check current status
2026-08-21 12:02:56,809 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:56,838 [ scc.git] DEBUG 5d0974d0 Merge pull request #498 from sbesson/actions_upgrade
2026-08-21 12:02:56,840 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:56,971 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:57,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-08-21 12:02:57,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:02:58,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:02:58,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:02:59,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:02:59,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:02:59,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:02:59,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 12:02:59,486 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:02:59,498 [ scc.git] DEBUG Check current status
2026-08-21 12:02:59,498 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:02:59,517 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-08-21 12:02:59,518 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:02:59,638 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:02:59,638 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-08-21 12:02:59,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-08-21 12:03:00,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:03:00,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:03:01,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:03:01,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:03:01,867 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:03:01,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:03:01,980 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 12:03:01,980 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-08-21 12:03:01,992 [ scc.git] DEBUG Check current status
2026-08-21 12:03:01,992 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:03:02,018 [ scc.git] DEBUG 116a77766 Merge pull request #683 from will-moore/post_data_saveImgRDef
2026-08-21 12:03:02,019 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:03:02,131 [ scc.config] DEBUG Found remote.origin.url
2026-08-21 12:03:02,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-08-21 12:03:02,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-08-21 12:03:03,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-08-21 12:03:03,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-08-21 12:03:04,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-08-21 12:03:04,353 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:03:04,462 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:03:04,462 [ scc.git] DEBUG Resetting...
2026-08-21 12:03:04,462 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-08-21 12:03:04,625 [ scc.git] DEBUG HEAD is now at 08dbb3a merge master -Dorg -Snone
2026-08-21 12:03:04,626 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-08-21 12:03:05,052 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-08-21 12:03:05,546 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-08-21 12:03:05,880 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-08-21 12:03:06,861 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-08-21 12:03:06,887 [ scc.git] DEBUG Check current status
2026-08-21 12:03:06,887 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-08-21 12:03:06,909 [ scc.git] DEBUG 08dbb3a merge master -Dorg -Snone
2026-08-21 12:03:06,910 [ scc.git] DEBUG Calling 'git submodule status'
2026-08-21 12:03:07,047 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-08-21 12:03:07,081 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-08-21 12:03:07,128 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-08-21 12:03:07,156 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-08-21 12:03:07,177 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-08-21 12:03:07,178 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-08-21 12:03:07,178 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-08-21 12:03:07,178 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-08-21 12:03:07,178 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-08-21 12:03:07,178 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-08-21 12:03:07,178 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-08-21 12:03:07,178 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:03:07,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-08-21 12:03:08,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-08-21 12:03:08,068 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:03:08,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:09,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:09,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:10,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:10,467 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 12:03:11,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-08-21 12:03:11,045 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:03:11,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:12,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:12,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:13,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:13,185 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 12:03:13,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-08-21 12:03:13,694 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:03:14,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:14,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:15,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:15,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:15,828 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 12:03:16,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-08-21 12:03:16,396 [ scc.repo] DEBUG # ... Include label: dependencies
2026-08-21 12:03:17,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:17,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:18,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:18,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:18,634 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 12:03:18,634 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:03:18,634 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:18,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:18,649 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:03:18,666 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:03:18,666 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:03:18,693 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:03:18,755 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:18,755 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-08-21 12:03:19,206 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:03:19,206 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-08-21 12:03:19,227 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-08-21 12:03:19,670 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:03:19,670 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-08-21 12:03:19,694 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-08-21 12:03:20,135 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:03:20,136 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-08-21 12:03:20,157 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-08-21 12:03:20,611 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-08-21 12:03:20,611 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-08-21 12:03:20,635 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:03:20,635 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:20,635 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:20,644 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 12:03:20,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:20,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-08-21 12:03:20,717 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:20,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:20,914 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 12:03:20,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:20,944 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-08-21 12:03:20,991 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:21,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:21,353 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 12:03:21,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:21,388 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-08-21 12:03:21,437 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:21,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:21,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 12:03:21,815 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:21,823 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-08-21 12:03:21,870 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:22,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:22,231 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:03:22,483 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:22,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:22,492 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:03:22,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-08-21 12:03:22,724 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:03:22,724 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 12:03:22,724 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:22,724 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:22,739 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:03:22,754 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:03:22,754 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:03:22,773 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:03:22,832 [ scc.git] DEBUG Already up to date.
2026-08-21 12:03:22,832 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:03:22,832 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:22,832 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:22,845 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:03:22,940 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:22,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:22,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:03:23,063 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:03:23,112 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8702b49450> has no local changes
2026-08-21 12:03:23,112 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:03:23,238 [ scc.git] DEBUG [detached HEAD dd4a10c] merge master -Dorg -Ssuccess-only
2026-08-21 12:03:23,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:03:23,240 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:03:23,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-08-21 12:03:24,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-08-21 12:03:24,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-08-21 12:03:25,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-08-21 12:03:25,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-08-21 12:03:26,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-08-21 12:03:26,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-08-21 12:03:26,653 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:03:26,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 12:03:26,653 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:26,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:26,666 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:03:26,684 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:03:26,684 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:03:26,707 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:03:26,948 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-08-21 12:03:27,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-08-21 12:03:28,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-08-21 12:03:29,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-08-21 12:03:30,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-08-21 12:03:30,109 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:03:30,109 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:30,109 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:30,129 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:03:30,236 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:30,236 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:30,247 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:03:30,350 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:03:30,478 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8702e88090> has no local changes
2026-08-21 12:03:30,478 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:03:30,625 [ scc.git] DEBUG [detached HEAD 73df15e] merge master -Dorg -Ssuccess-only
2026-08-21 12:03:30,626 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:03:30,627 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:03:30,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-08-21 12:03:31,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489 HTTP/1.1" 200 None
2026-08-21 12:03:32,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/489/comments HTTP/1.1" 200 None
2026-08-21 12:03:32,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:33,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:33,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:03:34,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:34,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/80cdacd6835aa00f8fa81f9f18212b072f6e1884?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:35,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:35,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/80cdacd6835aa00f8fa81f9f18212b072f6e1884/status HTTP/1.1" 200 None
2026-08-21 12:03:35,738 [ scc.repo] DEBUG - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-21 12:03:36,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-08-21 12:03:36,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-08-21 12:03:37,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-08-21 12:03:37,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-08-21 12:03:38,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-08-21 12:03:38,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-08-21 12:03:39,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:40,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:40,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:40,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:40,966 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-08-21 12:03:40,966 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:03:40,966 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 12:03:40,967 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:40,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:40,980 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:03:40,998 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:03:40,998 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:03:41,076 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:03:41,512 [ scc.git] DEBUG Updating b44120b5..5d0974d0
2026-08-21 12:03:42,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-08-21 12:03:43,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-08-21 12:03:43,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-08-21 12:03:44,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-08-21 12:03:45,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-08-21 12:03:46,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-08-21 12:03:47,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-08-21 12:03:48,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-08-21 12:03:48,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-08-21 12:03:48,969 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-08-21 12:03:49,601 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-21 12:03:49,601 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-08-21 12:03:49,629 [ scc.git] DEBUG Calling 'git fetch origin pull/489/head'
2026-08-21 12:03:50,697 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-08-21 12:03:50,697 [ scc.git] DEBUG * branch refs/pull/489/head -> FETCH_HEAD
2026-08-21 12:03:50,739 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:03:50,739 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:50,739 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:50,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-08-21 12:03:50,807 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:50,821 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-08-21 12:03:51,100 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-08-21 12:03:51,200 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:03:51,286 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-08-21 12:03:51,286 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-08-21 12:03:51,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:51,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-21 12:03:51,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:51,547 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 489 (Add more opts support for getObjects('Annotation')) 80cdacd6835aa00f8fa81f9f18212b072f6e1884'
2026-08-21 12:03:51,892 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-08-21 12:03:51,966 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:03:52,060 [ scc.git] DEBUG src/omero/gateway/__init__.py | 290 ++++++++++++++++--------------------------
2026-08-21 12:03:52,060 [ scc.git] DEBUG 1 file changed, 109 insertions(+), 181 deletions(-)
2026-08-21 12:03:52,304 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:03:52,305 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:03:52,430 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:52,431 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:52,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:03:52,560 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:03:52,687 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8702b9e6d0> has no local changes
2026-08-21 12:03:52,687 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:03:52,881 [ scc.git] DEBUG [detached HEAD f612b087] merge master -Dorg -Ssuccess-only
2026-08-21 12:03:52,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:03:52,885 [ scc.git] INFO Overriding base-branch from master to develop
2026-08-21 12:03:52,885 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:03:53,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-08-21 12:03:53,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-08-21 12:03:54,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:54,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:03:55,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:03:55,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-08-21 12:03:56,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:03:56,381 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-21 12:03:56,381 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:03:56,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 12:03:56,382 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:03:56,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:03:56,400 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-08-21 12:03:56,421 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:03:56,421 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-08-21 12:03:56,451 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-08-21 12:03:56,724 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-08-21 12:03:57,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-08-21 12:03:58,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-08-21 12:03:59,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-08-21 12:03:59,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-08-21 12:03:59,842 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-08-21 12:04:00,486 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-08-21 12:04:00,486 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-08-21 12:04:00,510 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:04:00,510 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:04:00,510 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:04:00,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-08-21 12:04:00,567 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:04:00,582 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-08-21 12:04:00,831 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:04:00,897 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-08-21 12:04:00,897 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-08-21 12:04:01,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:04:01,092 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:04:01,192 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:04:01,192 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:04:01,205 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:04:01,290 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:04:01,345 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8702ce33d0> has no local changes
2026-08-21 12:04:01,345 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:04:01,531 [ scc.git] DEBUG [detached HEAD df3ffa2] merge master -Dorg -Ssuccess-only
2026-08-21 12:04:01,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:04:01,533 [ scc.repo] DEBUG ## PRs found:
2026-08-21 12:04:01,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-08-21 12:04:02,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/685 HTTP/1.1" 200 None
2026-08-21 12:04:03,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:03,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:04,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:04,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:05,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/72461e7c571d3d45c668c1827baaa562eb007630?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:05,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:06,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/72461e7c571d3d45c668c1827baaa562eb007630/status HTTP/1.1" 200 None
2026-08-21 12:04:06,052 [ scc.repo] DEBUG - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-21 12:04:06,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-08-21 12:04:07,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-08-21 12:04:07,042 [ scc.repo] DEBUG # ... Include label: include
2026-08-21 12:04:07,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:08,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:09,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:09,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:10,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:10,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:11,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-08-21 12:04:11,405 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-21 12:04:12,103 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-08-21 12:04:12,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-08-21 12:04:13,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:13,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:14,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:14,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:15,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/54286f44fb13954e8e6d0f0dc3c069d4776756bf?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:15,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:16,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/54286f44fb13954e8e6d0f0dc3c069d4776756bf/status HTTP/1.1" 200 None
2026-08-21 12:04:16,419 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-21 12:04:16,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-08-21 12:04:19,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-08-21 12:04:20,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:20,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:21,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:21,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:22,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:22,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:23,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-08-21 12:04:23,272 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-21 12:04:23,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-08-21 12:04:24,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-08-21 12:04:24,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:25,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:25,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:26,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:26,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:27,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:27,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-08-21 12:04:27,887 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-21 12:04:28,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-08-21 12:04:28,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-08-21 12:04:29,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:30,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:30,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:31,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:31,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:32,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:32,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-08-21 12:04:32,555 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-21 12:04:33,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-08-21 12:04:33,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-08-21 12:04:34,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-08-21 12:04:34,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-08-21 12:04:35,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:35,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-08-21 12:04:36,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:37,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:37,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:38,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-08-21 12:04:38,383 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-08-21 12:04:38,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-08-21 12:04:39,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-08-21 12:04:39,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:40,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-08-21 12:04:41,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-08-21 12:04:41,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-08-21 12:04:41,460 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-21 12:04:41,461 [ scc.repo] DEBUG ## Branches found:
2026-08-21 12:04:41,461 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 12:04:41,463 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:04:41,463 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:04:41,484 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-08-21 12:04:41,532 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-08-21 12:04:41,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-08-21 12:04:41,809 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-08-21 12:04:43,054 [ scc.git] DEBUG Updating 675d57fd7..116a77766
2026-08-21 12:04:43,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-08-21 12:04:44,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-08-21 12:04:45,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-08-21 12:04:46,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-08-21 12:04:47,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-08-21 12:04:48,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-08-21 12:04:48,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-08-21 12:04:49,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-08-21 12:04:50,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-08-21 12:04:51,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-08-21 12:04:52,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-08-21 12:04:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-08-21 12:04:54,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-08-21 12:04:54,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-08-21 12:04:55,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-08-21 12:04:56,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-08-21 12:04:57,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-08-21 12:04:58,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-08-21 12:04:58,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-08-21 12:04:59,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-08-21 12:05:00,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-08-21 12:05:01,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-08-21 12:05:02,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-08-21 12:05:03,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-08-21 12:05:03,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-08-21 12:05:04,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-08-21 12:05:05,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-08-21 12:05:06,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-08-21 12:05:07,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-08-21 12:05:08,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-08-21 12:05:08,205 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-08-21 12:05:08,710 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:08,710 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-08-21 12:05:08,735 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-08-21 12:05:09,395 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:09,395 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-08-21 12:05:09,420 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-08-21 12:05:10,087 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:10,087 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-08-21 12:05:10,111 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-08-21 12:05:10,732 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:10,732 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-08-21 12:05:10,759 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-08-21 12:05:11,365 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:11,365 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-08-21 12:05:11,393 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-08-21 12:05:12,074 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:12,074 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-08-21 12:05:12,101 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-08-21 12:05:12,714 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:12,714 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-08-21 12:05:12,738 [ scc.git] DEBUG Calling 'git fetch origin pull/685/head'
2026-08-21 12:05:13,311 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-08-21 12:05:13,311 [ scc.git] DEBUG * branch refs/pull/685/head -> FETCH_HEAD
2026-08-21 12:05:13,339 [ scc.git] DEBUG ## Unique users: []
2026-08-21 12:05:13,341 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:05:13,341 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:13,356 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-21 12:05:13,401 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:13,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-08-21 12:05:13,996 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-08-21 12:05:14,079 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:14,173 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-08-21 12:05:14,173 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-08-21 12:05:14,173 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-08-21 12:05:14,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:14,376 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-21 12:05:14,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:14,452 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-08-21 12:05:14,765 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-08-21 12:05:14,765 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-21 12:05:14,841 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:14,924 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-08-21 12:05:14,924 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-08-21 12:05:14,924 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-08-21 12:05:14,924 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-08-21 12:05:15,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:15,110 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-21 12:05:15,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:15,192 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-08-21 12:05:15,496 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-21 12:05:15,571 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:15,656 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-08-21 12:05:15,658 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-08-21 12:05:15,660 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-08-21 12:05:15,660 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-08-21 12:05:15,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:15,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-21 12:05:15,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:15,927 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-08-21 12:05:16,179 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:16,236 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-08-21 12:05:16,236 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-08-21 12:05:16,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:16,427 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-21 12:05:16,491 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:16,504 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-08-21 12:05:16,742 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-08-21 12:05:16,813 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:16,882 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-08-21 12:05:16,882 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-08-21 12:05:16,882 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-08-21 12:05:17,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:17,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-21 12:05:17,152 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:17,163 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 54286f44fb13954e8e6d0f0dc3c069d4776756bf'
2026-08-21 12:05:17,398 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:17,465 [ scc.git] DEBUG omeroweb/api/urls.py | 22 +++++++++++
2026-08-21 12:05:17,465 [ scc.git] DEBUG omeroweb/api/views.py | 100 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-08-21 12:05:17,465 [ scc.git] DEBUG 2 files changed, 121 insertions(+), 1 deletion(-)
2026-08-21 12:05:17,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:17,655 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-21 12:05:17,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:17,743 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-08-21 12:05:18,000 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:18,083 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-08-21 12:05:18,083 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-08-21 12:05:18,083 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-08-21 12:05:18,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:18,264 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-21 12:05:18,345 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:18,358 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 685 (Prepare chgrp 'update' response before chgrp submission) 72461e7c571d3d45c668c1827baaa562eb007630'
2026-08-21 12:05:18,578 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-08-21 12:05:18,646 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-08-21 12:05:18,710 [ scc.git] DEBUG omeroweb/webclient/views.py | 80 +++++++++++++++++++++++----------------------
2026-08-21 12:05:18,710 [ scc.git] DEBUG 1 file changed, 41 insertions(+), 39 deletions(-)
2026-08-21 12:05:18,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:18,903 [ scc.git] DEBUG Calling 'git submodule update'
2026-08-21 12:05:19,013 [ scc.git] DEBUG Get sha1 of %s
2026-08-21 12:05:19,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-08-21 12:05:19,024 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:05:19,122 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:05:19,253 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8702bced90> has no local changes
2026-08-21 12:05:19,253 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:05:19,445 [ scc.git] DEBUG [detached HEAD ab312f1b1] merge master -Dorg -Ssuccess-only
2026-08-21 12:05:19,446 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:05:19,446 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-08-21 12:05:19,562 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-08-21 12:05:19,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:19,780 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-08-21 12:05:20,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:20,269 [ scc.config] DEBUG Found submodule.omero-py.url
2026-08-21 12:05:20,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:20,713 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-08-21 12:05:21,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:21,160 [ scc.config] DEBUG Found submodule.omero-web.url
2026-08-21 12:05:21,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-08-21 12:05:21,609 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-08-21 12:05:22,370 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f87058d2850> has local changes
2026-08-21 12:05:22,371 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
- PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
Updating b44120b5..5d0974d0
Previously merged:
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..116a77766
Previously merged:
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
Generated by OMERO-python-superbuild-push#48 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/48/)'
2026-08-21 12:05:22,615 [ scc.git] DEBUG [detached HEAD 53399a8] merge master -Dorg -Ssuccess-only
2026-08-21 12:05:22,615 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-08-21 12:05:22,617 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-08-21 12:05:22,617 [ scc.merge] INFO Already up to date.
2026-08-21 12:05:22,617 [ scc.merge] INFO
2026-08-21 12:05:22,617 [ scc.merge] INFO Merged PRs:
2026-08-21 12:05:22,617 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-08-21 12:05:22,617 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-08-21 12:05:22,617 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-08-21 12:05:22,617 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-08-21 12:05:22,617 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-08-21 12:05:22,618 [ scc.merge] INFO Already up to date.
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Repository: ome/omero-marshal
2026-08-21 12:05:22,618 [ scc.merge] INFO Excluded PRs:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-08-21 12:05:22,618 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-08-21 12:05:22,618 [ scc.merge] INFO Previously merged:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Repository: ome/omero-py
2026-08-21 12:05:22,618 [ scc.merge] INFO Excluded PRs:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft)
2026-08-21 12:05:22,618 [ scc.merge] INFO Updating b44120b5..5d0974d0
2026-08-21 12:05:22,618 [ scc.merge] INFO Previously merged:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Merged PRs:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Repository: ome/omero-scripts
2026-08-21 12:05:22,618 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-08-21 12:05:22,618 [ scc.merge] INFO Previously merged:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,618 [ scc.merge] INFO Merged PRs:
2026-08-21 12:05:22,618 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-08-21 12:05:22,618 [ scc.merge] INFO
2026-08-21 12:05:22,619 [ scc.merge] INFO Repository: ome/omero-web
2026-08-21 12:05:22,619 [ scc.merge] INFO Excluded PRs:
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-08-21 12:05:22,619 [ scc.merge] INFO Updating 675d57fd7..116a77766
2026-08-21 12:05:22,619 [ scc.merge] INFO Previously merged:
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-08-21 12:05:22,619 [ scc.merge] INFO
2026-08-21 12:05:22,619 [ scc.merge] INFO Merged PRs:
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-08-21 12:05:22,619 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-08-21 12:05:22,619 [ scc.merge] INFO
2026-08-21 12:05:22,620 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-08-21 12:05:22,620 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-08-21 12:05:22,632 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:05:22,647 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-08-21 12:05:22,647 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:05:22,663 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-08-21 12:05:22,663 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:05:22,680 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-08-21 12:05:22,680 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-08-21 12:05:22,699 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-08-21 12:05:22,699 [ scc.git] DEBUG Calling 'git remote'
2026-08-21 12:05:22,715 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
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grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-08-21 12:06:02,701 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
