Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-09-24 23:20:10,847 [ scc.config] DEBUG Found github.token
2026-09-24 23:20:10,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-24 23:20:11,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:11,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:11,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-24 23:20:11,974 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-24 23:20:11,974 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:11,984 [ scc.git] DEBUG Check current status
2026-09-24 23:20:11,984 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:12,004 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-24 23:20:12,005 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:12,167 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-24 23:20:12,230 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-24 23:20:12,325 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-24 23:20:12,402 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-24 23:20:12,499 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-24 23:20:12,515 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:12,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-24 23:20:13,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:13,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:14,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:14,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:14,736 [ scc.git] DEBUG Resetting...
2026-09-24 23:20:14,736 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-24 23:20:14,881 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-24 23:20:14,883 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-24 23:20:15,288 [ scc.git] DEBUG Check current status
2026-09-24 23:20:15,288 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:15,306 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-24 23:20:15,307 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:15,450 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-24 23:20:15,486 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-24 23:20:15,543 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-24 23:20:15,580 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-24 23:20:15,611 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-24 23:20:15,612 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-24 23:20:15,612 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-24 23:20:15,612 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-24 23:20:15,612 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-24 23:20:15,612 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-24 23:20:15,612 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:20:15,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-24 23:20:16,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-24 23:20:16,406 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:16,406 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-24 23:20:16,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-24 23:20:16,936 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:16,936 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-24 23:20:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-24 23:20:17,466 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:17,466 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-24 23:20:18,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-24 23:20:18,025 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:18,025 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-24 23:20:18,025 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:20:18,025 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:20:18,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:18,036 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:20:18,051 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:20:18,051 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:20:18,070 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:20:18,122 [ scc.git] DEBUG Already up to date.
2026-09-24 23:20:18,122 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-24 23:20:18,595 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:20:18,595 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-24 23:20:18,622 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-24 23:20:19,079 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:20:19,079 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-24 23:20:19,109 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-24 23:20:19,559 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:20:19,559 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-24 23:20:19,586 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-24 23:20:20,057 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:20:20,057 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-24 23:20:20,085 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:20:20,085 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:20:20,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:20,097 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-24 23:20:20,121 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:20,133 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-24 23:20:20,413 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:20:20,482 [ scc.git] DEBUG omero-marshal | 2 +-
2026-09-24 23:20:20,482 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-24 23:20:20,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:20,688 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-24 23:20:20,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:20,726 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-24 23:20:21,019 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:20:21,077 [ scc.git] DEBUG omero-web | 2 +-
2026-09-24 23:20:21,077 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-24 23:20:21,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:21,263 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-24 23:20:21,298 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:21,313 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-24 23:20:21,704 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:20:21,786 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-09-24 23:20:21,786 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-24 23:20:21,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:21,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-24 23:20:22,010 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:22,021 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-24 23:20:22,399 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:20:22,460 [ scc.git] DEBUG omero-py | 2 +-
2026-09-24 23:20:22,460 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-24 23:20:22,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:22,651 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:20:23,034 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-09-24 23:20:23,304 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-24 23:20:23,992 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-24 23:20:25,095 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-24 23:20:25,096 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:20:25,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:20:25,113 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:20:26,141 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8758683ad0> has no local changes
2026-09-24 23:20:26,141 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:20:26,727 [ scc.git] DEBUG [detached HEAD bb57a2d] merge master -Dorg -Snone
2026-09-24 23:20:26,729 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-24 23:20:26,729 [ scc.merge] INFO Already up to date.
2026-09-24 23:20:26,729 [ scc.merge] INFO
2026-09-24 23:20:26,730 [ scc.merge] INFO Merged PRs:
2026-09-24 23:20:26,730 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-24 23:20:26,730 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-24 23:20:26,730 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-24 23:20:26,730 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-24 23:20:26,730 [ scc.merge] INFO
2026-09-24 23:20:26,730 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-24 23:20:26,730 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
From https://github.com/ome/omero-web
52c47fd51..bf6d9d923 master -> origin/master
* [new tag] v5.33.2 -> v5.33.2
Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-24 23:20:35,284 [ scc.config] DEBUG Found github.token
2026-09-24 23:20:35,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-24 23:20:35,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:36,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:20:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-24 23:20:36,458 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-24 23:20:36,459 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:36,469 [ scc.git] DEBUG Check current status
2026-09-24 23:20:36,469 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:36,489 [ scc.git] DEBUG bb57a2d merge master -Dorg -Snone
2026-09-24 23:20:36,490 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:36,639 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-24 23:20:36,676 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-09-24 23:20:36,751 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-09-24 23:20:36,786 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-09-24 23:20:36,826 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923)
2026-09-24 23:20:36,852 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:36,853 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-09-24 23:20:36,855 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-24 23:20:37,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-24 23:20:37,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:38,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:38,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:39,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:39,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:39,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-24 23:20:39,478 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:39,490 [ scc.git] DEBUG Check current status
2026-09-24 23:20:39,490 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:39,508 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-09-24 23:20:39,509 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:39,627 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:39,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-09-24 23:20:40,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:40,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:41,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:41,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:41,853 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:41,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:20:41,969 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-24 23:20:41,969 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:41,980 [ scc.git] DEBUG Check current status
2026-09-24 23:20:41,980 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:42,000 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-09-24 23:20:42,001 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:42,118 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:42,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-09-24 23:20:43,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:43,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:43,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:44,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:44,414 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:44,530 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:20:44,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-24 23:20:44,531 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:44,545 [ scc.git] DEBUG Check current status
2026-09-24 23:20:44,545 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:44,576 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-09-24 23:20:44,581 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:44,705 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:45,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-09-24 23:20:45,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:45,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:46,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:46,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:46,899 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:47,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:20:47,012 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-24 23:20:47,012 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:47,024 [ scc.git] DEBUG Check current status
2026-09-24 23:20:47,024 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:47,044 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-09-24 23:20:47,045 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:47,158 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:47,158 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-09-24 23:20:47,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-09-24 23:20:47,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:48,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:48,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:49,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:49,354 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:49,486 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:20:49,487 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-24 23:20:49,487 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-24 23:20:49,501 [ scc.git] DEBUG Check current status
2026-09-24 23:20:49,501 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:49,547 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0
2026-09-24 23:20:49,548 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:49,691 [ scc.config] DEBUG Found remote.origin.url
2026-09-24 23:20:49,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-09-24 23:20:50,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-24 23:20:50,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-24 23:20:51,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-24 23:20:51,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-24 23:20:51,912 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:20:52,023 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:20:52,023 [ scc.git] DEBUG Resetting...
2026-09-24 23:20:52,023 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-24 23:20:52,182 [ scc.git] DEBUG HEAD is now at bb57a2d merge master -Dorg -Snone
2026-09-24 23:20:52,183 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-24 23:20:52,706 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-24 23:20:53,421 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-24 23:20:53,758 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-09-24 23:20:54,869 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-24 23:20:54,909 [ scc.git] DEBUG Check current status
2026-09-24 23:20:54,909 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-24 23:20:54,939 [ scc.git] DEBUG bb57a2d merge master -Dorg -Snone
2026-09-24 23:20:54,940 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-24 23:20:55,129 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-24 23:20:55,176 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-09-24 23:20:55,248 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-09-24 23:20:55,300 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-24 23:20:55,347 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-09-24 23:20:55,348 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-24 23:20:55,348 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-24 23:20:55,348 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-24 23:20:55,348 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-24 23:20:55,348 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-24 23:20:55,348 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-09-24 23:20:55,349 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:20:55,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-24 23:20:56,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-24 23:20:56,141 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:56,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-24 23:20:57,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:20:57,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-24 23:20:58,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:20:58,298 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-24 23:20:58,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-24 23:20:58,824 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:20:59,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-24 23:20:59,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:00,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:00,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:21:00,935 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-24 23:21:01,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-24 23:21:01,443 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:21:02,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:02,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:03,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:03,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:21:03,487 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-24 23:21:04,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-24 23:21:04,011 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-24 23:21:04,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:05,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:05,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:06,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:21:06,089 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-24 23:21:06,089 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:21:06,089 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:06,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:06,101 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:21:06,115 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:21:06,115 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:21:06,140 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:21:06,193 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:06,193 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-24 23:21:06,668 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:21:06,668 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-24 23:21:06,697 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-24 23:21:07,157 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:21:07,157 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-24 23:21:07,187 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-24 23:21:07,642 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:21:07,642 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-24 23:21:07,668 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-24 23:21:08,104 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-24 23:21:08,104 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-24 23:21:08,129 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:21:08,129 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:08,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:08,139 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-24 23:21:08,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:08,173 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-24 23:21:08,226 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:08,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:08,426 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-24 23:21:08,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:08,475 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-24 23:21:08,551 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:08,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:08,859 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-24 23:21:08,897 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:08,909 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-24 23:21:08,978 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:09,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:09,300 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-24 23:21:09,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:09,343 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-24 23:21:09,406 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:09,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:09,735 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:21:09,994 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:09,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:10,005 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:21:10,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-09-24 23:21:10,241 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:21:10,241 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-24 23:21:10,241 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:10,241 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:10,257 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:21:10,274 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:21:10,274 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:21:10,294 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:21:10,353 [ scc.git] DEBUG Already up to date.
2026-09-24 23:21:10,353 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:21:10,353 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:10,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:10,370 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:21:10,519 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:10,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:10,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:21:10,666 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:21:10,718 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9eb324910> has no local changes
2026-09-24 23:21:10,719 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:21:10,870 [ scc.git] DEBUG [detached HEAD 5a4598a] merge master -Dorg -Ssuccess-only
2026-09-24 23:21:10,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:21:10,873 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:21:11,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-09-24 23:21:11,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-09-24 23:21:12,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-09-24 23:21:12,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-09-24 23:21:13,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-09-24 23:21:13,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-09-24 23:21:14,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-09-24 23:21:14,194 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:21:14,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-24 23:21:14,194 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:14,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:14,208 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:21:14,224 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:21:14,224 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:21:14,248 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:21:14,494 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-09-24 23:21:15,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-09-24 23:21:16,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-09-24 23:21:17,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-09-24 23:21:17,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-09-24 23:21:17,831 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:21:17,831 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:17,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:17,849 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:21:17,980 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:17,980 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:17,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:21:18,119 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:21:18,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9eb217490> has no local changes
2026-09-24 23:21:18,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:21:18,369 [ scc.git] DEBUG [detached HEAD 626c99f] merge master -Dorg -Ssuccess-only
2026-09-24 23:21:18,370 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:21:18,370 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:21:18,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-09-24 23:21:19,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-09-24 23:21:19,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-09-24 23:21:20,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-09-24 23:21:20,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-09-24 23:21:21,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:22,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:22,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:21:23,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:23,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:24,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:24,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-09-24 23:21:24,639 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-24 23:21:25,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-09-24 23:21:25,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-09-24 23:21:26,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:26,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:27,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:27,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:21:27,590 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-09-24 23:21:27,590 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:21:27,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-24 23:21:27,591 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:27,591 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:27,610 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:21:27,633 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:21:27,633 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:21:27,988 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:21:28,588 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-09-24 23:21:29,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None
2026-09-24 23:21:30,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-09-24 23:21:31,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-09-24 23:21:32,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-09-24 23:21:32,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-09-24 23:21:33,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-09-24 23:21:34,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-09-24 23:21:35,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-09-24 23:21:36,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-09-24 23:21:37,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-09-24 23:21:37,147 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-09-24 23:21:37,788 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-24 23:21:37,788 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-09-24 23:21:37,820 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-09-24 23:21:38,661 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-24 23:21:38,661 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-09-24 23:21:38,694 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:21:38,694 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:38,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:38,717 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-09-24 23:21:38,799 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:38,817 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-09-24 23:21:39,138 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-09-24 23:21:39,226 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:21:39,322 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-09-24 23:21:39,322 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-09-24 23:21:39,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:39,517 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-24 23:21:39,606 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:39,621 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-24 23:21:39,943 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-09-24 23:21:40,027 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:21:40,124 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-09-24 23:21:40,124 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-09-24 23:21:40,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:40,316 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:21:40,469 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:40,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:40,489 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:21:40,648 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:21:40,813 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9eb272fd0> has no local changes
2026-09-24 23:21:40,813 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:21:41,039 [ scc.git] DEBUG [detached HEAD c079b347] merge master -Dorg -Ssuccess-only
2026-09-24 23:21:41,046 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:21:41,046 [ scc.git] INFO Overriding base-branch from master to develop
2026-09-24 23:21:41,046 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:21:41,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-09-24 23:21:41,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-09-24 23:21:42,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:43,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:43,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:21:44,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:44,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:21:44,683 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-24 23:21:44,683 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:21:44,683 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-24 23:21:44,684 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:44,684 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:44,702 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-09-24 23:21:44,721 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:21:44,721 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-09-24 23:21:44,756 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-09-24 23:21:45,055 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-09-24 23:21:45,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-09-24 23:21:46,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-09-24 23:21:47,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-09-24 23:21:48,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-09-24 23:21:48,351 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-09-24 23:21:48,934 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-09-24 23:21:48,934 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-09-24 23:21:48,959 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:21:48,959 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:48,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:48,973 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-09-24 23:21:49,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:49,029 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-09-24 23:21:49,270 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:21:49,342 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-09-24 23:21:49,342 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-09-24 23:21:49,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:21:49,543 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:21:49,675 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:21:49,675 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:21:49,691 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:21:49,808 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:21:49,877 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9ea09cd90> has no local changes
2026-09-24 23:21:49,877 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:21:50,037 [ scc.git] DEBUG [detached HEAD 3191260] merge master -Dorg -Ssuccess-only
2026-09-24 23:21:50,038 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:21:50,038 [ scc.repo] DEBUG ## PRs found:
2026-09-24 23:21:50,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-09-24 23:21:50,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None
2026-09-24 23:21:51,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None
2026-09-24 23:21:51,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-09-24 23:21:52,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-09-24 23:21:52,478 [ scc.repo] DEBUG # ... Include label: include
2026-09-24 23:21:53,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:53,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:54,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:21:54,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:55,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:55,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:56,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-09-24 23:21:56,261 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-24 23:21:56,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-09-24 23:21:57,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-09-24 23:21:58,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5?page=1 HTTP/1.1" 200 None
2026-09-24 23:21:58,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:21:59,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:21:59,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:00,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/761fe5e2404d2659e8bdf73524fab0a8e37656a5?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:00,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:01,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/761fe5e2404d2659e8bdf73524fab0a8e37656a5/status HTTP/1.1" 200 None
2026-09-24 23:22:01,353 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-24 23:22:01,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-09-24 23:22:02,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-09-24 23:22:02,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:03,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:04,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:22:04,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:04,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:05,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:05,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-09-24 23:22:05,926 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-24 23:22:06,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-09-24 23:22:06,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-09-24 23:22:07,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:08,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:08,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:22:09,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:09,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:10,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:10,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-09-24 23:22:10,854 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-24 23:22:11,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-09-24 23:22:11,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-09-24 23:22:12,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:13,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:13,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:22:14,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:14,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:14,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:15,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-09-24 23:22:15,525 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-24 23:22:16,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-09-24 23:22:16,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-09-24 23:22:17,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-09-24 23:22:17,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-09-24 23:22:18,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:18,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:19,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-24 23:22:19,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:20,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:20,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:21,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-09-24 23:22:21,180 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-09-24 23:22:21,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-09-24 23:22:22,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-09-24 23:22:22,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:23,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-24 23:22:23,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-24 23:22:24,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-09-24 23:22:24,242 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-24 23:22:24,242 [ scc.repo] DEBUG ## Branches found:
2026-09-24 23:22:24,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-24 23:22:24,243 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:22:24,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:22:24,262 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-24 23:22:24,281 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-24 23:22:24,281 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-24 23:22:25,771 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-24 23:22:27,144 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923
2026-09-24 23:22:27,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None
2026-09-24 23:22:28,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None
2026-09-24 23:22:29,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None
2026-09-24 23:22:30,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-09-24 23:22:31,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-09-24 23:22:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-09-24 23:22:32,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-09-24 23:22:33,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-09-24 23:22:34,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-09-24 23:22:35,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-09-24 23:22:36,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-09-24 23:22:36,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-09-24 23:22:37,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-09-24 23:22:38,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-09-24 23:22:39,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-09-24 23:22:40,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-09-24 23:22:41,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-09-24 23:22:42,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-09-24 23:22:43,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-09-24 23:22:43,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-09-24 23:22:44,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-09-24 23:22:45,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-09-24 23:22:46,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-09-24 23:22:47,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-09-24 23:22:47,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-09-24 23:22:48,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-09-24 23:22:49,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-09-24 23:22:50,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-09-24 23:22:51,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-09-24 23:22:52,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-09-24 23:22:53,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-09-24 23:22:54,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-09-24 23:22:54,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-09-24 23:22:54,887 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-09-24 23:22:55,527 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:55,527 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-09-24 23:22:55,558 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-09-24 23:22:56,334 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:56,334 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-09-24 23:22:56,365 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-09-24 23:22:57,072 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:57,072 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-09-24 23:22:57,098 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-09-24 23:22:57,686 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:57,686 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-09-24 23:22:57,715 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-09-24 23:22:58,361 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:58,361 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-09-24 23:22:58,390 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-09-24 23:22:59,114 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:59,114 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-09-24 23:22:59,141 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-09-24 23:22:59,782 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-24 23:22:59,782 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-09-24 23:22:59,819 [ scc.git] DEBUG ## Unique users: []
2026-09-24 23:22:59,819 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:22:59,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:22:59,850 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-24 23:22:59,959 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:22:59,976 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-24 23:23:00,760 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-09-24 23:23:00,863 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:00,996 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-09-24 23:23:00,996 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-09-24 23:23:00,996 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-09-24 23:23:01,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:01,240 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-24 23:23:01,364 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:01,384 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-24 23:23:01,830 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-09-24 23:23:01,830 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-09-24 23:23:01,901 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:01,996 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-09-24 23:23:01,996 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-09-24 23:23:01,996 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-09-24 23:23:01,996 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-09-24 23:23:02,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:02,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-24 23:23:02,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:02,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-24 23:23:02,716 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-24 23:23:02,807 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:02,929 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-09-24 23:23:02,929 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-09-24 23:23:02,929 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-09-24 23:23:02,929 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-09-24 23:23:03,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:03,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-24 23:23:03,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:03,233 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-24 23:23:03,533 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:03,610 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-09-24 23:23:03,610 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-09-24 23:23:03,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:03,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-24 23:23:03,916 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:03,932 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-24 23:23:04,272 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-24 23:23:04,374 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:04,470 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-09-24 23:23:04,470 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-09-24 23:23:04,470 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-09-24 23:23:04,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:04,662 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...761fe5e2404d2659e8bdf73524fab0a8e37656a5'
2026-09-24 23:23:04,806 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:04,825 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 761fe5e2404d2659e8bdf73524fab0a8e37656a5'
2026-09-24 23:23:05,223 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:05,307 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-09-24 23:23:05,307 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-09-24 23:23:05,307 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-09-24 23:23:05,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:05,490 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-24 23:23:05,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:05,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-24 23:23:06,208 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-24 23:23:06,314 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-09-24 23:23:06,314 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-09-24 23:23:06,314 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-09-24 23:23:06,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:06,518 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-24 23:23:06,688 [ scc.git] DEBUG Get sha1 of %s
2026-09-24 23:23:06,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-24 23:23:06,701 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:23:06,811 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:23:06,969 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9ea0aa990> has no local changes
2026-09-24 23:23:06,969 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:23:07,153 [ scc.git] DEBUG [detached HEAD 887168497] merge master -Dorg -Ssuccess-only
2026-09-24 23:23:07,156 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:23:07,156 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-24 23:23:07,300 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-09-24 23:23:07,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:07,736 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-09-24 23:23:08,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:08,196 [ scc.config] DEBUG Found submodule.omero-py.url
2026-09-24 23:23:08,578 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:08,625 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-09-24 23:23:09,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:09,269 [ scc.config] DEBUG Found submodule.omero-web.url
2026-09-24 23:23:09,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-24 23:23:09,697 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-24 23:23:10,363 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff9ec3cc750> has local changes
2026-09-24 23:23:10,363 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#78 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/78/)'
2026-09-24 23:23:10,674 [ scc.git] DEBUG [detached HEAD 9ba0377] merge master -Dorg -Ssuccess-only
2026-09-24 23:23:10,675 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-09-24 23:23:10,678 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-24 23:23:10,678 [ scc.merge] INFO Already up to date.
2026-09-24 23:23:10,678 [ scc.merge] INFO
2026-09-24 23:23:10,678 [ scc.merge] INFO Merged PRs:
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-24 23:23:10,678 [ scc.merge] INFO
2026-09-24 23:23:10,678 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-09-24 23:23:10,678 [ scc.merge] INFO Already up to date.
2026-09-24 23:23:10,678 [ scc.merge] INFO
2026-09-24 23:23:10,678 [ scc.merge] INFO
2026-09-24 23:23:10,678 [ scc.merge] INFO Repository: ome/omero-marshal
2026-09-24 23:23:10,678 [ scc.merge] INFO Excluded PRs:
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-09-24 23:23:10,678 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-09-24 23:23:10,678 [ scc.merge] INFO Previously merged:
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-09-24 23:23:10,678 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO Repository: ome/omero-py
2026-09-24 23:23:10,679 [ scc.merge] INFO Excluded PRs:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-09-24 23:23:10,679 [ scc.merge] INFO Updating b44120b5..8990768d
2026-09-24 23:23:10,679 [ scc.merge] INFO Previously merged:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO Merged PRs:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO Repository: ome/omero-scripts
2026-09-24 23:23:10,679 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-09-24 23:23:10,679 [ scc.merge] INFO Previously merged:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO Merged PRs:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-24 23:23:10,679 [ scc.merge] INFO
2026-09-24 23:23:10,679 [ scc.merge] INFO Repository: ome/omero-web
2026-09-24 23:23:10,679 [ scc.merge] INFO Excluded PRs:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-09-24 23:23:10,679 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923
2026-09-24 23:23:10,679 [ scc.merge] INFO Previously merged:
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-09-24 23:23:10,679 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-09-24 23:23:10,680 [ scc.merge] INFO
2026-09-24 23:23:10,680 [ scc.merge] INFO Merged PRs:
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-24 23:23:10,680 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-24 23:23:10,680 [ scc.merge] INFO
2026-09-24 23:23:10,680 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-24 23:23:10,680 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,697 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-24 23:23:10,698 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,721 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:23:10,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-24 23:23:10,722 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:23:10,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-24 23:23:10,742 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:23:10,760 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-24 23:23:10,760 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-24 23:23:10,782 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-24 23:23:10,782 [ scc.git] DEBUG Calling 'git remote'
2026-09-24 23:23:10,806 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
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Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-09-24 23:23:52,385 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
