Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ unset VIRTUAL_ENV_PROMPT
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ VIRTUAL_ENV_PROMPT='(venv) '
++ export VIRTUAL_ENV_PROMPT
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2026-09-27 23:37:06,468 [ scc.config] DEBUG Found github.token
2026-09-27 23:37:06,470 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-27 23:37:06,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:07,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:07,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-27 23:37:07,594 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-27 23:37:07,595 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:07,606 [ scc.git] DEBUG Check current status
2026-09-27 23:37:07,606 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:07,636 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-27 23:37:07,638 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:07,835 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-27 23:37:07,895 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-27 23:37:07,987 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-27 23:37:08,040 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-27 23:37:08,137 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-27 23:37:08,148 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:08,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-27 23:37:08,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:09,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:09,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:10,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:10,295 [ scc.git] DEBUG Resetting...
2026-09-27 23:37:10,295 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-27 23:37:10,492 [ scc.git] DEBUG HEAD is now at b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-27 23:37:10,493 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-27 23:37:10,916 [ scc.git] DEBUG Check current status
2026-09-27 23:37:10,916 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:10,931 [ scc.git] DEBUG b68c3cf Merge pull request #332 from ome/dependabot/submodules/omero-py-780876c
2026-09-27 23:37:10,932 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:11,096 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5)
2026-09-27 23:37:11,135 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66)
2026-09-27 23:37:11,199 [ scc.git] DEBUG 780876c5f6b48c327ef1685b377bac2c3cc46797 omero-py (v5.21.1-15-g780876c5)
2026-09-27 23:37:11,240 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-27 23:37:11,283 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3)
2026-09-27 23:37:11,284 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-27 23:37:11,284 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-27 23:37:11,284 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-27 23:37:11,284 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-27 23:37:11,284 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-27 23:37:11,284 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:37:11,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-27 23:37:12,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-27 23:37:12,188 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:12,188 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-27 23:37:12,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-27 23:37:12,688 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:12,688 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-27 23:37:13,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-27 23:37:13,203 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:13,203 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-27 23:37:13,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-27 23:37:13,710 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:13,710 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-27 23:37:13,710 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:37:13,711 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:37:13,711 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:13,724 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:37:13,741 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:37:13,741 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:37:13,766 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:37:13,821 [ scc.git] DEBUG Already up to date.
2026-09-27 23:37:13,821 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-27 23:37:14,324 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:37:14,324 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-27 23:37:14,361 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-27 23:37:14,815 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:37:14,815 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-27 23:37:14,845 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-27 23:37:15,328 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:37:15,328 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-27 23:37:15,364 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-27 23:37:15,822 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:37:15,822 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-27 23:37:15,863 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:37:15,863 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:37:15,863 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:15,878 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-27 23:37:15,906 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:15,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-27 23:37:16,276 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:37:16,351 [ scc.git] DEBUG omero-marshal | 2 +-
2026-09-27 23:37:16,352 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-27 23:37:16,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:16,532 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-27 23:37:16,565 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:16,576 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-27 23:37:16,926 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:37:17,009 [ scc.git] DEBUG omero-web | 2 +-
2026-09-27 23:37:17,009 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-27 23:37:17,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:17,190 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-27 23:37:17,221 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:17,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-27 23:37:17,604 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:37:17,685 [ scc.git] DEBUG omero-dropbox | 2 +-
2026-09-27 23:37:17,685 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-27 23:37:17,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:17,872 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-27 23:37:17,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:17,926 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-27 23:37:18,291 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:37:18,370 [ scc.git] DEBUG omero-py | 2 +-
2026-09-27 23:37:18,370 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2026-09-27 23:37:18,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:18,592 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:37:19,049 [ scc.git] DEBUG Submodule path 'omero-dropbox': checked out 'ac93ed4b4a139dd73b414ead55223071fc465de5'
2026-09-27 23:37:19,404 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-27 23:37:20,192 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-27 23:37:21,322 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-27 23:37:21,323 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:37:21,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:37:21,335 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:37:22,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb9c76da550> has no local changes
2026-09-27 23:37:22,642 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:37:23,220 [ scc.git] DEBUG [detached HEAD 5402e26] merge master -Dorg -Snone
2026-09-27 23:37:23,221 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-27 23:37:23,221 [ scc.merge] INFO Already up to date.
2026-09-27 23:37:23,221 [ scc.merge] INFO
2026-09-27 23:37:23,221 [ scc.merge] INFO Merged PRs:
2026-09-27 23:37:23,221 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-27 23:37:23,221 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-27 23:37:23,221 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-27 23:37:23,222 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-27 23:37:23,222 [ scc.merge] INFO
2026-09-27 23:37:23,222 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-27 23:37:23,222 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-marshal': checked out 'f8ff1c2e439f0599d96423b7f64898864548ba9f'
Submodule path 'omero-py': checked out '8990768db971d03ea5dafabc177aab910f567c68'
Submodule path 'omero-scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0'
Submodule path 'omero-web': checked out 'bf6d9d9236add51d41b100c8bc2cff6bdc917389'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-27 23:37:30,954 [ scc.config] DEBUG Found github.token
2026-09-27 23:37:30,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2026-09-27 23:37:31,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:31,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:37:32,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2026-09-27 23:37:32,083 [ scc.gh] DEBUG 5000 remaining from 5000 (Reset at 00:09
2026-09-27 23:37:32,084 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:32,100 [ scc.git] DEBUG Check current status
2026-09-27 23:37:32,100 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:32,128 [ scc.git] DEBUG 5402e26 merge master -Dorg -Snone
2026-09-27 23:37:32,130 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:32,334 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-27 23:37:32,387 [ scc.git] DEBUG +f8ff1c2e439f0599d96423b7f64898864548ba9f omero-marshal (v0.9.1-3-gf8ff1c2)
2026-09-27 23:37:32,487 [ scc.git] DEBUG +8990768db971d03ea5dafabc177aab910f567c68 omero-py (v5.23.0-37-g8990768d)
2026-09-27 23:37:32,539 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 omero-scripts (v5.10.0-1-g5b4d768)
2026-09-27 23:37:32,632 [ scc.git] DEBUG +bf6d9d9236add51d41b100c8bc2cff6bdc917389 omero-web (v5.33.2-1-gbf6d9d923)
2026-09-27 23:37:32,647 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:32,647 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2026-09-27 23:37:32,650 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2026-09-27 23:37:32,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2026-09-27 23:37:33,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:33,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:34,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:34,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:34,823 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:34,989 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-27 23:37:34,989 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:35,009 [ scc.git] DEBUG Check current status
2026-09-27 23:37:35,009 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:35,031 [ scc.git] DEBUG ac93ed4 Merge pull request #26 from ome/dependabot/github_actions/dot-github/workflows/pypa/gh-action-pypi-publish-1.13.0
2026-09-27 23:37:35,033 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:35,205 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:35,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2026-09-27 23:37:35,998 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:36,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:36,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:37,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:37,363 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:37,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:37:37,521 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-27 23:37:37,521 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:37,535 [ scc.git] DEBUG Check current status
2026-09-27 23:37:37,535 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:37,563 [ scc.git] DEBUG f8ff1c2 Merge pull request #90 from sbesson/python_3.9_removal
2026-09-27 23:37:37,565 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:37,723 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:38,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2026-09-27 23:37:38,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:38,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:39,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:39,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:39,860 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:40,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:37:40,015 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-27 23:37:40,015 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:40,040 [ scc.git] DEBUG Check current status
2026-09-27 23:37:40,040 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:40,082 [ scc.git] DEBUG 8990768d Merge pull request #489 from will-moore/getObjects_Annotations
2026-09-27 23:37:40,087 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:40,246 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:40,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2026-09-27 23:37:41,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:41,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:41,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:42,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:42,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:42,560 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:37:42,561 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-27 23:37:42,561 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:42,580 [ scc.git] DEBUG Check current status
2026-09-27 23:37:42,580 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:42,608 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0
2026-09-27 23:37:42,609 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:42,771 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:42,771 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2026-09-27 23:37:43,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2026-09-27 23:37:43,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:44,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:44,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:44,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:44,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:45,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:37:45,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-27 23:37:45,068 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2026-09-27 23:37:45,089 [ scc.git] DEBUG Check current status
2026-09-27 23:37:45,089 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:45,145 [ scc.git] DEBUG bf6d9d923 Bump version: 5.33.2 → 5.33.3.dev0
2026-09-27 23:37:45,147 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:45,329 [ scc.config] DEBUG Found remote.origin.url
2026-09-27 23:37:45,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2026-09-27 23:37:46,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2026-09-27 23:37:46,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2026-09-27 23:37:47,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2026-09-27 23:37:47,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2026-09-27 23:37:47,480 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:37:47,636 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:37:47,636 [ scc.git] DEBUG Resetting...
2026-09-27 23:37:47,637 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2026-09-27 23:37:47,882 [ scc.git] DEBUG HEAD is now at 5402e26 merge master -Dorg -Snone
2026-09-27 23:37:47,883 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2026-09-27 23:37:48,440 [ scc.git] DEBUG Submodule path 'omero-marshal': checked out 'a3dd99b825ad44c9beadc38a8ae8ba94a155f62c'
2026-09-27 23:37:49,061 [ scc.git] DEBUG Submodule path 'omero-py': checked out 'b44120b5235b24db6dde315369ea1519bbeb30c1'
2026-09-27 23:37:49,468 [ scc.git] DEBUG Submodule path 'omero-scripts': checked out '03b9116196e1a799dd18a666559613d912be01a5'
2026-09-27 23:37:50,986 [ scc.git] DEBUG Submodule path 'omero-web': checked out '675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b'
2026-09-27 23:37:51,020 [ scc.git] DEBUG Check current status
2026-09-27 23:37:51,021 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2026-09-27 23:37:51,047 [ scc.git] DEBUG 5402e26 merge master -Dorg -Snone
2026-09-27 23:37:51,048 [ scc.git] DEBUG Calling 'git submodule status'
2026-09-27 23:37:51,279 [ scc.git] DEBUG ac93ed4b4a139dd73b414ead55223071fc465de5 omero-dropbox (v5.7.0-11-gac93ed4)
2026-09-27 23:37:51,334 [ scc.git] DEBUG a3dd99b825ad44c9beadc38a8ae8ba94a155f62c omero-marshal (v0.9.0-18-ga3dd99b)
2026-09-27 23:37:51,415 [ scc.git] DEBUG b44120b5235b24db6dde315369ea1519bbeb30c1 omero-py (v5.21.2-3-gb44120b5)
2026-09-27 23:37:51,467 [ scc.git] DEBUG 03b9116196e1a799dd18a666559613d912be01a5 omero-scripts (v5.9.1-3-g03b9116)
2026-09-27 23:37:51,524 [ scc.git] DEBUG 675d57fd7b1eb7bc99ac2c01ed9298ec49bd315b omero-web (v5.29.3-1-g675d57fd7)
2026-09-27 23:37:51,526 [ scc.merge] INFO Merging Pull Request(s) based on master
2026-09-27 23:37:51,526 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2026-09-27 23:37:51,526 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2026-09-27 23:37:51,526 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2026-09-27 23:37:51,526 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2026-09-27 23:37:51,526 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2026-09-27 23:37:51,526 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:37:51,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None
2026-09-27 23:37:52,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/339 HTTP/1.1" 200 None
2026-09-27 23:37:52,328 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:52,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:53,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:37:53,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:54,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/63a18b5f1659f0aa65739e3db4eb4179a1fac96d?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:37:54,368 [ scc.repo] DEBUG - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-27 23:37:54,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/338 HTTP/1.1" 200 None
2026-09-27 23:37:54,862 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:55,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:56,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:37:56,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/09050892c054f3697fd3604d05ce68b65af6dedf?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:57,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/09050892c054f3697fd3604d05ce68b65af6dedf?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:37:57,007 [ scc.repo] DEBUG - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-27 23:37:57,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/337 HTTP/1.1" 200 None
2026-09-27 23:37:57,518 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:37:58,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:58,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:37:59,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/7632acc02b92ba91ed954701ac52de2732a56daa?page=1 HTTP/1.1" 200 None
2026-09-27 23:37:59,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/7632acc02b92ba91ed954701ac52de2732a56daa?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:37:59,610 [ scc.repo] DEBUG - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-27 23:38:00,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/334 HTTP/1.1" 200 None
2026-09-27 23:38:00,118 [ scc.repo] DEBUG # ... Include label: dependencies
2026-09-27 23:38:00,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:01,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:01,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/e5077065e3781e634471b4828f120f18c16dad1c?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:02,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/e5077065e3781e634471b4828f120f18c16dad1c?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:38:02,106 [ scc.repo] DEBUG - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-27 23:38:02,106 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:38:02,106 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:02,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:02,119 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:38:02,136 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:38:02,136 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:38:02,167 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:38:02,235 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:02,235 [ scc.git] DEBUG Calling 'git fetch origin pull/334/head'
2026-09-27 23:38:02,746 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:38:02,746 [ scc.git] DEBUG * branch refs/pull/334/head -> FETCH_HEAD
2026-09-27 23:38:02,782 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2026-09-27 23:38:03,266 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:38:03,266 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2026-09-27 23:38:03,338 [ scc.git] DEBUG Calling 'git fetch origin pull/338/head'
2026-09-27 23:38:03,876 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:38:03,876 [ scc.git] DEBUG * branch refs/pull/338/head -> FETCH_HEAD
2026-09-27 23:38:03,905 [ scc.git] DEBUG Calling 'git fetch origin pull/339/head'
2026-09-27 23:38:04,408 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild
2026-09-27 23:38:04,408 [ scc.git] DEBUG * branch refs/pull/339/head -> FETCH_HEAD
2026-09-27 23:38:04,443 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:38:04,443 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:04,443 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:04,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-27 23:38:04,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:04,499 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 334 (Bump omero-marshal from `6d44f66` to `a3dd99b`) e5077065e3781e634471b4828f120f18c16dad1c'
2026-09-27 23:38:04,570 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:04,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:04,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-27 23:38:04,791 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:04,802 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (Bump omero-web from `2a7c4d2` to `675d57f`) 7632acc02b92ba91ed954701ac52de2732a56daa'
2026-09-27 23:38:04,865 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:05,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:05,191 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-27 23:38:05,220 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:05,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 338 (Bump omero-dropbox from `01fa0c5` to `ac93ed4`) 09050892c054f3697fd3604d05ce68b65af6dedf'
2026-09-27 23:38:05,291 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:05,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:05,619 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-27 23:38:05,647 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:05,662 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 339 (Bump omero-py from `780876c` to `b44120b`) 63a18b5f1659f0aa65739e3db4eb4179a1fac96d'
2026-09-27 23:38:05,741 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:06,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:06,054 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:38:06,391 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:06,391 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:06,407 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:38:06,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 2
2026-09-27 23:38:06,619 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:38:06,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-27 23:38:06,619 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:06,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:06,640 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:38:06,672 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:38:06,672 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:38:06,697 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:38:06,766 [ scc.git] DEBUG Already up to date.
2026-09-27 23:38:06,766 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:38:06,766 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:06,766 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:06,784 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:38:06,938 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:06,938 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:06,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:38:07,092 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:38:07,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2cd10090> has no local changes
2026-09-27 23:38:07,144 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:38:07,300 [ scc.git] DEBUG [detached HEAD d249884] merge master -Dorg -Ssuccess-only
2026-09-27 23:38:07,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:38:07,302 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:38:07,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2026-09-27 23:38:08,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None
2026-09-27 23:38:08,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None
2026-09-27 23:38:09,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2026-09-27 23:38:09,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2026-09-27 23:38:10,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2026-09-27 23:38:10,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2026-09-27 23:38:10,538 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:38:10,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-27 23:38:10,538 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:10,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:10,561 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:38:10,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:38:10,587 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:38:10,623 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:38:10,948 [ scc.git] DEBUG Updating a3dd99b..f8ff1c2
2026-09-27 23:38:11,563 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/90 HTTP/1.1" 200 None
2026-09-27 23:38:12,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/89 HTTP/1.1" 200 None
2026-09-27 23:38:13,177 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/69 HTTP/1.1" 200 None
2026-09-27 23:38:13,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls/88 HTTP/1.1" 200 None
2026-09-27 23:38:13,922 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:38:13,923 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:13,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:13,950 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:38:14,112 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:14,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:14,129 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:38:14,298 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:38:14,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2cc38390> has no local changes
2026-09-27 23:38:14,430 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:38:14,608 [ scc.git] DEBUG [detached HEAD 9dcb572] merge master -Dorg -Ssuccess-only
2026-09-27 23:38:14,613 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:38:14,613 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:38:15,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2026-09-27 23:38:15,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None
2026-09-27 23:38:16,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None
2026-09-27 23:38:16,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None
2026-09-27 23:38:17,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459/comments HTTP/1.1" 200 None
2026-09-27 23:38:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:18,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:18,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:38:19,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:19,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/57c54f02b543e8f7da852c34a0ababf95562853d?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:20,145 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:20,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/57c54f02b543e8f7da852c34a0ababf95562853d/status HTTP/1.1" 200 None
2026-09-27 23:38:20,677 [ scc.repo] DEBUG - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-27 23:38:21,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2026-09-27 23:38:21,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None
2026-09-27 23:38:22,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:22,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:23,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:23,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:38:23,709 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2026-09-27 23:38:23,709 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:38:23,709 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-27 23:38:23,710 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:23,710 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:23,731 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:38:23,756 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:38:23,756 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:38:24,281 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:38:25,004 [ scc.git] DEBUG Updating b44120b5..8990768d
2026-09-27 23:38:25,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/489 HTTP/1.1" 200 None
2026-09-27 23:38:26,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/498 HTTP/1.1" 200 None
2026-09-27 23:38:27,367 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/495 HTTP/1.1" 200 None
2026-09-27 23:38:28,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/496 HTTP/1.1" 200 None
2026-09-27 23:38:28,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/199 HTTP/1.1" 200 None
2026-09-27 23:38:29,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/492 HTTP/1.1" 200 None
2026-09-27 23:38:30,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/493 HTTP/1.1" 200 None
2026-09-27 23:38:31,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/491 HTTP/1.1" 200 None
2026-09-27 23:38:31,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/490 HTTP/1.1" 200 None
2026-09-27 23:38:32,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls/483 HTTP/1.1" 200 None
2026-09-27 23:38:32,818 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2026-09-27 23:38:33,479 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-27 23:38:33,479 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2026-09-27 23:38:33,511 [ scc.git] DEBUG Calling 'git fetch origin pull/459/head'
2026-09-27 23:38:34,439 [ scc.git] DEBUG From https://github.com/ome/omero-py
2026-09-27 23:38:34,439 [ scc.git] DEBUG * branch refs/pull/459/head -> FETCH_HEAD
2026-09-27 23:38:34,466 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:38:34,467 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:34,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:34,486 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2026-09-27 23:38:34,576 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:34,593 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2026-09-27 23:38:34,985 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2026-09-27 23:38:35,066 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:38:35,168 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2026-09-27 23:38:35,168 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2026-09-27 23:38:35,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:35,353 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-27 23:38:35,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:35,489 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 459 (Wrapper improvements for ROIs) 57c54f02b543e8f7da852c34a0ababf95562853d'
2026-09-27 23:38:35,892 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2026-09-27 23:38:35,982 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:38:36,093 [ scc.git] DEBUG src/omero/gateway/__init__.py | 45 ++++++++++++++++++++++++++++++++++++-------
2026-09-27 23:38:36,093 [ scc.git] DEBUG 1 file changed, 38 insertions(+), 7 deletions(-)
2026-09-27 23:38:36,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:36,294 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:38:36,458 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:36,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:36,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:38:36,633 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:38:36,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2ccdd890> has no local changes
2026-09-27 23:38:36,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:38:37,022 [ scc.git] DEBUG [detached HEAD b9067691] merge master -Dorg -Ssuccess-only
2026-09-27 23:38:37,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:38:37,029 [ scc.git] INFO Overriding base-branch from master to develop
2026-09-27 23:38:37,029 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:38:37,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2026-09-27 23:38:37,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/232 HTTP/1.1" 200 None
2026-09-27 23:38:38,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:38,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:39,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:38:39,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/e190baa635f40826befc84321719243092ee849f?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:40,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/e190baa635f40826befc84321719243092ee849f?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:38:40,326 [ scc.repo] DEBUG - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-27 23:38:40,326 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:38:40,327 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-27 23:38:40,327 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:40,327 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:40,352 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2026-09-27 23:38:40,374 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:38:40,374 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2026-09-27 23:38:40,412 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2026-09-27 23:38:40,695 [ scc.git] DEBUG Updating 03b9116..5b4d768
2026-09-27 23:38:41,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None
2026-09-27 23:38:42,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None
2026-09-27 23:38:42,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None
2026-09-27 23:38:43,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None
2026-09-27 23:38:43,636 [ scc.git] DEBUG Calling 'git fetch origin pull/232/head'
2026-09-27 23:38:44,220 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2026-09-27 23:38:44,220 [ scc.git] DEBUG * branch refs/pull/232/head -> FETCH_HEAD
2026-09-27 23:38:44,246 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:38:44,246 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:44,246 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:44,307 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e190baa635f40826befc84321719243092ee849f'
2026-09-27 23:38:44,355 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:44,375 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 232 (Add Auto header detection to `Populate_Metadata.py`) e190baa635f40826befc84321719243092ee849f'
2026-09-27 23:38:44,631 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:38:44,697 [ scc.git] DEBUG omero/import_scripts/Populate_Metadata.py | 26 ++++++++++++++++++++++++--
2026-09-27 23:38:44,697 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-)
2026-09-27 23:38:44,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:38:44,881 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:38:45,025 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:38:45,025 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:38:45,046 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:38:45,201 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:38:45,291 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2c297d90> has no local changes
2026-09-27 23:38:45,291 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:38:45,496 [ scc.git] DEBUG [detached HEAD 64cb0e6] merge master -Dorg -Ssuccess-only
2026-09-27 23:38:45,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:38:45,499 [ scc.repo] DEBUG ## PRs found:
2026-09-27 23:38:45,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2026-09-27 23:38:46,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687 HTTP/1.1" 200 None
2026-09-27 23:38:46,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/687/comments HTTP/1.1" 200 None
2026-09-27 23:38:47,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684 HTTP/1.1" 200 None
2026-09-27 23:38:47,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/684/comments HTTP/1.1" 200 None
2026-09-27 23:38:47,955 [ scc.repo] DEBUG # ... Include label: include
2026-09-27 23:38:48,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:49,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:49,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:38:50,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:50,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:51,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:51,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8dbf1c22784a7faaa1db2ff9d5150edbc823e575/status HTTP/1.1" 200 None
2026-09-27 23:38:51,536 [ scc.repo] DEBUG - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-27 23:38:52,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682 HTTP/1.1" 200 None
2026-09-27 23:38:52,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/682/comments HTTP/1.1" 200 None
2026-09-27 23:38:53,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:53,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:54,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:38:54,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:55,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/2e6b8720dd1d8506d474bf40e282184270ae2634?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:55,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:56,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/2e6b8720dd1d8506d474bf40e282184270ae2634/status HTTP/1.1" 200 None
2026-09-27 23:38:56,011 [ scc.repo] DEBUG - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-27 23:38:56,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677 HTTP/1.1" 200 None
2026-09-27 23:38:56,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/677/comments HTTP/1.1" 200 None
2026-09-27 23:38:57,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:58,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:38:58,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:38:59,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-27 23:38:59,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:00,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:00,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7/status HTTP/1.1" 200 None
2026-09-27 23:39:00,736 [ scc.repo] DEBUG - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-27 23:39:01,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644 HTTP/1.1" 200 None
2026-09-27 23:39:01,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/644/comments HTTP/1.1" 200 None
2026-09-27 23:39:02,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:02,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:03,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:39:04,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:04,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:04,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:05,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1beaa97e6086aaf1e1f8e6147f93dcef722be4f3/status HTTP/1.1" 200 None
2026-09-27 23:39:05,406 [ scc.repo] DEBUG - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-27 23:39:05,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643 HTTP/1.1" 200 None
2026-09-27 23:39:06,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/643/comments HTTP/1.1" 200 None
2026-09-27 23:39:06,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:07,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:08,166 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:39:08,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:09,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/1122646161dfcf0118e5940417b3c04a9568f93e?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:09,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:10,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/1122646161dfcf0118e5940417b3c04a9568f93e/status HTTP/1.1" 200 None
2026-09-27 23:39:10,102 [ scc.repo] DEBUG - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-27 23:39:10,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638 HTTP/1.1" 200 None
2026-09-27 23:39:11,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/638/comments HTTP/1.1" 200 None
2026-09-27 23:39:11,570 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None
2026-09-27 23:39:12,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None
2026-09-27 23:39:12,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:13,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:13,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None
2026-09-27 23:39:14,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:14,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:15,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:15,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None
2026-09-27 23:39:15,635 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf'
2026-09-27 23:39:16,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None
2026-09-27 23:39:16,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602/comments HTTP/1.1" 200 None
2026-09-27 23:39:17,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:17,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2026-09-27 23:39:18,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539?page=1 HTTP/1.1" 200 None
2026-09-27 23:39:18,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 2
2026-09-27 23:39:18,619 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-27 23:39:18,619 [ scc.repo] DEBUG ## Branches found:
2026-09-27 23:39:18,619 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-27 23:39:18,620 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:39:18,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:18,647 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2026-09-27 23:39:18,675 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2026-09-27 23:39:18,675 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2026-09-27 23:39:20,407 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2026-09-27 23:39:21,930 [ scc.git] DEBUG Updating 675d57fd7..bf6d9d923
2026-09-27 23:39:22,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/691 HTTP/1.1" 200 None
2026-09-27 23:39:23,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/685 HTTP/1.1" 200 None
2026-09-27 23:39:24,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/688 HTTP/1.1" 200 None
2026-09-27 23:39:24,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/683 HTTP/1.1" 200 None
2026-09-27 23:39:25,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/681 HTTP/1.1" 200 None
2026-09-27 23:39:26,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/679 HTTP/1.1" 200 None
2026-09-27 23:39:27,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/676 HTTP/1.1" 200 None
2026-09-27 23:39:27,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/675 HTTP/1.1" 200 None
2026-09-27 23:39:28,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/613 HTTP/1.1" 200 None
2026-09-27 23:39:29,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/670 HTTP/1.1" 200 None
2026-09-27 23:39:30,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/667 HTTP/1.1" 200 None
2026-09-27 23:39:30,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/666 HTTP/1.1" 200 None
2026-09-27 23:39:31,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/655 HTTP/1.1" 200 None
2026-09-27 23:39:32,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/665 HTTP/1.1" 200 None
2026-09-27 23:39:33,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/664 HTTP/1.1" 200 None
2026-09-27 23:39:34,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/658 HTTP/1.1" 200 None
2026-09-27 23:39:34,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/656 HTTP/1.1" 200 None
2026-09-27 23:39:35,732 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/653 HTTP/1.1" 200 None
2026-09-27 23:39:36,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/646 HTTP/1.1" 200 None
2026-09-27 23:39:37,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/639 HTTP/1.1" 200 None
2026-09-27 23:39:38,044 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/662 HTTP/1.1" 200 None
2026-09-27 23:39:38,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/651 HTTP/1.1" 200 None
2026-09-27 23:39:39,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/650 HTTP/1.1" 200 None
2026-09-27 23:39:40,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/649 HTTP/1.1" 200 None
2026-09-27 23:39:41,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/648 HTTP/1.1" 200 None
2026-09-27 23:39:41,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/647 HTTP/1.1" 200 None
2026-09-27 23:39:42,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/645 HTTP/1.1" 200 None
2026-09-27 23:39:43,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/637 HTTP/1.1" 200 None
2026-09-27 23:39:44,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/629 HTTP/1.1" 200 None
2026-09-27 23:39:44,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/628 HTTP/1.1" 200 None
2026-09-27 23:39:45,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/619 HTTP/1.1" 200 None
2026-09-27 23:39:46,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/612 HTTP/1.1" 200 None
2026-09-27 23:39:47,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/534 HTTP/1.1" 200 None
2026-09-27 23:39:47,393 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head'
2026-09-27 23:39:48,053 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:48,054 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD
2026-09-27 23:39:48,086 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head'
2026-09-27 23:39:48,847 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:48,847 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD
2026-09-27 23:39:48,879 [ scc.git] DEBUG Calling 'git fetch origin pull/643/head'
2026-09-27 23:39:49,639 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:49,640 [ scc.git] DEBUG * branch refs/pull/643/head -> FETCH_HEAD
2026-09-27 23:39:49,671 [ scc.git] DEBUG Calling 'git fetch origin pull/644/head'
2026-09-27 23:39:50,298 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:50,298 [ scc.git] DEBUG * branch refs/pull/644/head -> FETCH_HEAD
2026-09-27 23:39:50,332 [ scc.git] DEBUG Calling 'git fetch origin pull/677/head'
2026-09-27 23:39:50,970 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:50,970 [ scc.git] DEBUG * branch refs/pull/677/head -> FETCH_HEAD
2026-09-27 23:39:51,003 [ scc.git] DEBUG Calling 'git fetch origin pull/682/head'
2026-09-27 23:39:51,907 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:51,907 [ scc.git] DEBUG * branch refs/pull/682/head -> FETCH_HEAD
2026-09-27 23:39:51,938 [ scc.git] DEBUG Calling 'git fetch origin pull/684/head'
2026-09-27 23:39:52,595 [ scc.git] DEBUG From https://github.com/ome/omero-web
2026-09-27 23:39:52,595 [ scc.git] DEBUG * branch refs/pull/684/head -> FETCH_HEAD
2026-09-27 23:39:52,628 [ scc.git] DEBUG ## Unique users: []
2026-09-27 23:39:52,628 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:39:52,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:52,647 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-27 23:39:52,744 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:52,761 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539'
2026-09-27 23:39:53,479 [ scc.git] DEBUG Auto-merging omeroweb/webclient/static/webclient/css/dusty.css
2026-09-27 23:39:53,577 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:53,734 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 -
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++--
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++-
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +-
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++-
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++--
2026-09-27 23:39:53,734 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++--
2026-09-27 23:39:53,735 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++-----
2026-09-27 23:39:53,735 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 +
2026-09-27 23:39:53,735 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +-
2026-09-27 23:39:53,735 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++--
2026-09-27 23:39:53,735 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-)
2026-09-27 23:39:53,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:53,940 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-27 23:39:54,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:54,111 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d'
2026-09-27 23:39:54,577 [ scc.git] DEBUG Auto-merging omeroweb/webclient/controller/container.py
2026-09-27 23:39:54,577 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py
2026-09-27 23:39:54,663 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:54,781 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------
2026-09-27 23:39:54,781 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +---
2026-09-27 23:39:54,782 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 -----------------
2026-09-27 23:39:54,782 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-)
2026-09-27 23:39:54,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:54,944 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-27 23:39:55,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:55,095 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 643 (Don't disable the histogram for big images) 1122646161dfcf0118e5940417b3c04a9568f93e'
2026-09-27 23:39:55,524 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-27 23:39:55,609 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:55,733 [ scc.git] DEBUG .../templates/webclient/annotations/metadata_preview.html | 8 ++++----
2026-09-27 23:39:55,734 [ scc.git] DEBUG omeroweb/webgateway/static/webgateway/js/ome.histogram.js | 4 ++++
2026-09-27 23:39:55,734 [ scc.git] DEBUG omeroweb/webgateway/views.py | 4 +---
2026-09-27 23:39:55,734 [ scc.git] DEBUG 3 files changed, 9 insertions(+), 7 deletions(-)
2026-09-27 23:39:55,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:55,912 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-27 23:39:56,075 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:56,094 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 644 (Add some install instructions for windows) 1beaa97e6086aaf1e1f8e6147f93dcef722be4f3'
2026-09-27 23:39:56,525 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:56,631 [ scc.git] DEBUG README.rst | 50 ++++++++++++++++++++++++++++++++++++++++++++------
2026-09-27 23:39:56,631 [ scc.git] DEBUG 1 file changed, 44 insertions(+), 6 deletions(-)
2026-09-27 23:39:56,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:56,796 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-27 23:39:56,964 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:56,985 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 677 (Add table_histogram endpoint) 1f39cd33a36c91e84dc6aaa40d3e379dbb997ac7'
2026-09-27 23:39:57,423 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2026-09-27 23:39:57,526 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:57,627 [ scc.git] DEBUG omeroweb/webgateway/urls.py | 11 +++++
2026-09-27 23:39:57,627 [ scc.git] DEBUG omeroweb/webgateway/views.py | 108 +++++++++++++++++++++++++++++++++++++++----
2026-09-27 23:39:57,627 [ scc.git] DEBUG 2 files changed, 109 insertions(+), 10 deletions(-)
2026-09-27 23:39:58,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:58,013 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-27 23:39:58,200 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:58,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 682 (Initial support for JSON api /annotations endpoint) 2e6b8720dd1d8506d474bf40e282184270ae2634'
2026-09-27 23:39:58,657 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:58,750 [ scc.git] DEBUG omeroweb/api/urls.py | 22 ++++++++++
2026-09-27 23:39:58,750 [ scc.git] DEBUG omeroweb/api/views.py | 115 +++++++++++++++++++++++++++++++++++++++++++++++++-
2026-09-27 23:39:58,750 [ scc.git] DEBUG 2 files changed, 136 insertions(+), 1 deletion(-)
2026-09-27 23:39:58,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:58,943 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-27 23:39:59,119 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:39:59,140 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 684 (add config "omero.web.annotation_order") 8dbf1c22784a7faaa1db2ff9d5150edbc823e575'
2026-09-27 23:39:59,593 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2026-09-27 23:39:59,689 [ scc.git] DEBUG omeroweb/settings.py | 21 +++++++++++++++++++++
2026-09-27 23:39:59,689 [ scc.git] DEBUG omeroweb/webclient/tree.py | 27 ++++++++++++++++++++++++++-
2026-09-27 23:39:59,689 [ scc.git] DEBUG 2 files changed, 47 insertions(+), 1 deletion(-)
2026-09-27 23:39:59,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:39:59,862 [ scc.git] DEBUG Calling 'git submodule update'
2026-09-27 23:40:00,037 [ scc.git] DEBUG Get sha1 of %s
2026-09-27 23:40:00,037 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2026-09-27 23:40:00,054 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:40:00,210 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:40:00,416 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2cc4f910> has no local changes
2026-09-27 23:40:00,416 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:40:00,624 [ scc.git] DEBUG [detached HEAD e0795ca74] merge master -Dorg -Ssuccess-only
2026-09-27 23:40:00,627 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:40:00,627 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2026-09-27 23:40:00,804 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2026-09-27 23:40:00,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:40:01,047 [ scc.config] DEBUG Found submodule.omero-marshal.url
2026-09-27 23:40:01,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:40:01,465 [ scc.config] DEBUG Found submodule.omero-py.url
2026-09-27 23:40:01,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:40:01,919 [ scc.config] DEBUG Found submodule.omero-scripts.url
2026-09-27 23:40:02,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:40:02,354 [ scc.config] DEBUG Found submodule.omero-web.url
2026-09-27 23:40:02,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2026-09-27 23:40:02,818 [ scc.git] DEBUG Calling 'git status --porcelain'
2026-09-27 23:40:03,842 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3a2dcc6d10> has local changes
2026-09-27 23:40:03,842 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Merged PRs:
- PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
- PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
- PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
- PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
Repository: ome/omero-dropbox
Already up to date.
Repository: ome/omero-marshal
Excluded PRs:
- PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Updating a3dd99b..f8ff1c2
Previously merged:
- PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
- PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
- PR 69 will-moore 'Roi encoder allows Shape None'
- PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
Repository: ome/omero-py
Excluded PRs:
- PR 470 multimeric 'Faux import' (user: multimeric)
Updating b44120b5..8990768d
Previously merged:
- PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
- PR 498 sbesson 'Upgrade GitHub actions'
- PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
- PR 496 will-moore 'Fix ice-3.6 download link in README'
- PR 199 joshmoore 'user: allow setting default group'
- PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
- PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
- PR 491 kkoz 'First pass at better cleanse dry-run output'
- PR 490 sbesson 'Remove support from Python 3.9'
- PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
Merged PRs:
- PR 391 joshmoore 'Add jstack command'
- PR 459 Tom-TBT 'Wrapper improvements for ROIs'
Repository: ome/omero-scripts
Updating 03b9116..5b4d768
Previously merged:
- PR 231 jburel 'Create Release '
- PR 229 Rdornier 'Adding support for custom user label'
- PR 223 will-moore 'don't attempt ROI stats on big images'
- PR 230 Rdornier 'Import from csv fix'
Merged PRs:
- PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
Repository: ome/omero-web
Excluded PRs:
- PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
- PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
Updating 675d57fd7..bf6d9d923
Previously merged:
- PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
- PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
- PR 688 pwalczysko 'Fix formatting and linting failures'
- PR 683 will-moore 'Post data save imgRdef'
- PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
- PR 679 knabar 'Allow POST requests from public user for specific URLs'
- PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
- PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 613 will-moore 'externalInfo display'
- PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
- PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
- PR 655 will-moore 'Handle invalid group id in switch_active_group'
- PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
- PR 664 knabar 'Pin django-pipeline to a recent version'
- PR 658 will-moore 'Description scrollable if taller than 350px'
- PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
- PR 646 knabar 'Force Django 5.2 in next release'
- PR 639 Rdornier 'Split view user label'
- PR 662 jburel 'Add gunicorn doc links'
- PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
- PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
- PR 648 will-moore 'hide scrollbar for top-links'
- PR 647 jburel 'Replace manual changelog by automated GH release step'
- PR 645 knabar 'Update changelog for 5.30.0 release'
- PR 637 knabar 'Upgrade to Django 5.2 '
- PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 628 jburel 'Add protocol required since Django4'
- PR 619 DavidStirling 'Permit subpackages as app plugins'
- PR 612 will-moore 'Allow top_links to wrap if too many for space'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
Merged PRs:
- PR 602 Tom-TBT 'Inherit all annotations'
- PR 604 will-moore 'Right panel perf'
- PR 643 will-moore 'Don't disable the histogram for big images'
- PR 644 jo-mueller 'Add some install instructions for windows'
- PR 677 will-moore 'Add table_histogram endpoint'
- PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
- PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
Generated by OMERO-python-superbuild-push#82 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/82/)'
2026-09-27 23:40:04,195 [ scc.git] DEBUG [detached HEAD d030b96] merge master -Dorg -Ssuccess-only
2026-09-27 23:40:04,195 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2026-09-27 23:40:04,198 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2026-09-27 23:40:04,198 [ scc.merge] INFO Already up to date.
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO Merged PRs:
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 334 dependabot[bot] 'Bump omero-marshal from `6d44f66` to `a3dd99b`'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 337 dependabot[bot] 'Bump omero-web from `2a7c4d2` to `675d57f`'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 338 dependabot[bot] 'Bump omero-dropbox from `01fa0c5` to `ac93ed4`'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 339 dependabot[bot] 'Bump omero-py from `780876c` to `b44120b`'
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO Repository: ome/omero-dropbox
2026-09-27 23:40:04,198 [ scc.merge] INFO Already up to date.
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO Repository: ome/omero-marshal
2026-09-27 23:40:04,198 [ scc.merge] INFO Excluded PRs:
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft)
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2026-09-27 23:40:04,198 [ scc.merge] INFO Updating a3dd99b..f8ff1c2
2026-09-27 23:40:04,198 [ scc.merge] INFO Previously merged:
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 90 sbesson 'Remove Python 3.9 from the testing matrix'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 89 sbesson 'Replace manual CHANGELOG by automated GitHub release creation step'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 88 sbesson 'Fix format of requirement specifiers for Ice wheel packages'
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO
2026-09-27 23:40:04,198 [ scc.merge] INFO Repository: ome/omero-py
2026-09-27 23:40:04,198 [ scc.merge] INFO Excluded PRs:
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric)
2026-09-27 23:40:04,198 [ scc.merge] INFO Updating b44120b5..8990768d
2026-09-27 23:40:04,198 [ scc.merge] INFO Previously merged:
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 489 will-moore 'Add more opts support for getObjects('Annotation')'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 498 sbesson 'Upgrade GitHub actions'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 495 will-moore 'RoiWrapper load_shapes includes externalInfo'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 496 will-moore 'Fix ice-3.6 download link in README'
2026-09-27 23:40:04,198 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 492 sbesson 'omero admin cleanse: handle missing directories in the ManagedRepository'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 493 sbesson 'Deprecate omero.util.cleanse.main method in favor of omero admin cleanse'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 491 kkoz 'First pass at better cleanse dry-run output'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 490 sbesson 'Remove support from Python 3.9'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 483 sbesson 'omero.gateway: deprecate BlitzObjectWrapper.getExternalInfo()'
2026-09-27 23:40:04,199 [ scc.merge] INFO
2026-09-27 23:40:04,199 [ scc.merge] INFO Merged PRs:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs'
2026-09-27 23:40:04,199 [ scc.merge] INFO
2026-09-27 23:40:04,199 [ scc.merge] INFO Repository: ome/omero-scripts
2026-09-27 23:40:04,199 [ scc.merge] INFO Updating 03b9116..5b4d768
2026-09-27 23:40:04,199 [ scc.merge] INFO Previously merged:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 231 jburel 'Create Release '
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix'
2026-09-27 23:40:04,199 [ scc.merge] INFO
2026-09-27 23:40:04,199 [ scc.merge] INFO Merged PRs:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 232 muhanadz 'Add Auto header detection to `Populate_Metadata.py`'
2026-09-27 23:40:04,199 [ scc.merge] INFO
2026-09-27 23:40:04,199 [ scc.merge] INFO Repository: ome/omero-web
2026-09-27 23:40:04,199 [ scc.merge] INFO Excluded PRs:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 687 TorecLuik 'Preserve formatting in script activity messages' (user: TorecLuik)
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 638 will-moore 'Allow display of ex-members data in group' (exclude comment)
2026-09-27 23:40:04,199 [ scc.merge] INFO Updating 675d57fd7..bf6d9d923
2026-09-27 23:40:04,199 [ scc.merge] INFO Previously merged:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 691 sbesson 'Honor the configured login view when redirecting as the public user'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 685 will-moore 'Prepare chgrp 'update' response before chgrp submission'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 688 pwalczysko 'Fix formatting and linting failures'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 683 will-moore 'Post data save imgRdef'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 681 sbesson 'Relax Python<3.13 requirement for OMERO.web'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 679 knabar 'Allow POST requests from public user for specific URLs'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 676 knabar 'Fix tree child counts for Tags view to enable paging in center panel'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 675 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 670 sbesson 'Webclient activites: defensively cast start_time to string'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 667 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 666 melissalinkert 'Include plate acquisition start time even if end time is missing'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 655 will-moore 'Handle invalid group id in switch_active_group'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 665 sbesson 'Bump minimal django-redis requirement to 6.x'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 664 knabar 'Pin django-pipeline to a recent version'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 658 will-moore 'Description scrollable if taller than 350px'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 656 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 653 sbesson 'Update imgData endpoint to return more metadata about the resolutions'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 646 knabar 'Force Django 5.2 in next release'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 639 Rdornier 'Split view user label'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 662 jburel 'Add gunicorn doc links'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 651 Tom-TBT 'typo fix in MetadataDetectorForm zoom property'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 650 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 649 Tom-TBT 'Strip line endings from LUTs in text format'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 648 will-moore 'hide scrollbar for top-links'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 647 jburel 'Replace manual changelog by automated GH release step'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 645 knabar 'Update changelog for 5.30.0 release'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 637 knabar 'Upgrade to Django 5.2 '
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space'
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2026-09-27 23:40:04,199 [ scc.merge] INFO
2026-09-27 23:40:04,199 [ scc.merge] INFO Merged PRs:
2026-09-27 23:40:04,199 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 643 will-moore 'Don't disable the histogram for big images'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 644 jo-mueller 'Add some install instructions for windows'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 677 will-moore 'Add table_histogram endpoint'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 682 will-moore 'Initial support for JSON api /annotations endpoint'
2026-09-27 23:40:04,200 [ scc.merge] INFO - PR 684 JoshuaFortriede 'add config "omero.web.annotation_order"'
2026-09-27 23:40:04,200 [ scc.merge] INFO
2026-09-27 23:40:04,200 [ scc.merge] DEBUG Cleaning remote branches created for merging
2026-09-27 23:40:04,200 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2026-09-27 23:40:04,222 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:40:04,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2026-09-27 23:40:04,246 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:40:04,273 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2026-09-27 23:40:04,273 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:40:04,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2026-09-27 23:40:04,297 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2026-09-27 23:40:04,321 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2026-09-27 23:40:04,321 [ scc.git] DEBUG Calling 'git remote'
2026-09-27 23:40:04,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen
return opener.open(url, data, timeout)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 525, in open
response = meth(req, response)
^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response
response = self.parent.error(
^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 563, in error
return self._call_chain(*args)
^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain
result = func(*args)
^^^^^^^^^^^
File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from ac93ed4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from a3dd99b
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from b44120b5
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 03b9116
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from 675d57fd7
nothing to commit, working tree clean
HEAD detached from b68c3cf
nothing to commit, working tree clean
2026-09-27 23:40:48,371 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
