Console Output
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-05-19 00:33:54,396 [ scc.config] DEBUG Found github.token
2024-05-19 00:33:54,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-19 00:33:54,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:33:55,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:33:55,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-19 00:33:55,469 [ scc.gh] DEBUG 4666 remaining from 5000 (Reset at 01:05
2024-05-19 00:33:55,470 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:33:55,476 [ scc.git] DEBUG Check current status
2024-05-19 00:33:55,476 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:33:55,481 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-19 00:33:55,482 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:33:55,536 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-19 00:33:55,540 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-19 00:33:55,582 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-19 00:33:55,588 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-19 00:33:55,753 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-19 00:33:55,763 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:33:55,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-19 00:33:56,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:33:56,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:33:57,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:33:57,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:33:57,693 [ scc.git] DEBUG Resetting...
2024-05-19 00:33:57,693 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-19 00:33:57,704 [ scc.git] DEBUG HEAD is now at ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-19 00:33:57,705 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-19 00:33:57,774 [ scc.git] DEBUG Check current status
2024-05-19 00:33:57,774 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:33:57,783 [ scc.git] DEBUG ee4b0ba Merge pull request #278 from ome/dependabot/submodules/omero-py-53a327b
2024-05-19 00:33:57,783 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:33:57,847 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-19 00:33:57,851 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-19 00:33:57,856 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-19 00:33:57,860 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-19 00:33:57,865 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-19 00:33:57,867 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-19 00:33:57,867 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-19 00:33:57,867 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-19 00:33:57,867 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-19 00:33:57,867 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-19 00:33:57,867 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:33:58,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-19 00:33:58,134 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:33:58,134 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:33:58,134 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:33:58,139 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:33:58,146 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:33:58,146 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:33:58,152 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:33:58,158 [ scc.git] DEBUG Already up to date.
2024-05-19 00:33:58,159 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:33:58,159 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:33:58,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:33:58,163 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:33:58,217 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:33:58,217 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:33:58,221 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:33:58,396 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6a07c4be80> has no local changes
2024-05-19 00:33:58,396 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone
Repository: ome/omero-python-superbuild
Already up to date.
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:33:58,434 [ scc.git] DEBUG [detached HEAD b9798b6] merge master -Dorg -Snone
2024-05-19 00:33:58,434 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-19 00:33:58,434 [ scc.merge] INFO Already up to date.
2024-05-19 00:33:58,434 [ scc.merge] INFO
2024-05-19 00:33:58,435 [ scc.merge] INFO
2024-05-19 00:33:58,435 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-19 00:33:58,435 [ scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Submodule path 'omero-web': checked out 'c6314d8a9917ba4112696d683516d89be8fafcb0'
Merge all submodules using repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-19 00:34:01,216 [ scc.config] DEBUG Found github.token
2024-05-19 00:34:01,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-05-19 00:34:01,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:34:01,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:34:02,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-05-19 00:34:02,263 [ scc.gh] DEBUG 4658 remaining from 5000 (Reset at 01:05
2024-05-19 00:34:02,264 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:02,269 [ scc.git] DEBUG Check current status
2024-05-19 00:34:02,269 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:02,273 [ scc.git] DEBUG b9798b6 merge master -Dorg -Snone
2024-05-19 00:34:02,274 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:02,341 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-19 00:34:02,344 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-19 00:34:02,349 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-19 00:34:02,353 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-19 00:34:02,357 [ scc.git] DEBUG +c6314d8a9917ba4112696d683516d89be8fafcb0 omero-web (v5.25.0-43-gc6314d8a9)
2024-05-19 00:34:02,362 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:02,363 [ scc.git] DEBUG Reading repository configuration from repositories.yml
2024-05-19 00:34:02,365 [ scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
omero-scripts:
base-branch: develop
2024-05-19 00:34:02,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-05-19 00:34:03,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:03,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:04,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:04,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:04,474 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:04,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-19 00:34:04,532 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:04,536 [ scc.git] DEBUG Check current status
2024-05-19 00:34:04,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:04,541 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-05-19 00:34:04,542 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:04,597 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:04,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-05-19 00:34:05,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:05,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:06,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:06,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:06,668 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:06,710 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:06,711 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-19 00:34:06,711 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:06,716 [ scc.git] DEBUG Check current status
2024-05-19 00:34:06,716 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:06,721 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-05-19 00:34:06,721 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:06,772 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:07,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-05-19 00:34:07,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:08,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:08,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:08,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:08,875 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:08,923 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:08,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-19 00:34:08,924 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:08,929 [ scc.git] DEBUG Check current status
2024-05-19 00:34:08,929 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:08,948 [ scc.git] DEBUG 53a327b8 Merge pull request #407 from jburel/install_conda_forge
2024-05-19 00:34:08,948 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:08,998 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:09,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-05-19 00:34:09,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:10,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:10,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:11,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:11,065 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:11,109 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:11,110 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-19 00:34:11,110 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:11,116 [ scc.git] DEBUG Check current status
2024-05-19 00:34:11,116 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:11,131 [ scc.git] DEBUG 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-19 00:34:11,131 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:11,185 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:11,187 [ scc.git] DEBUG Repository configuration:
base-branch: develop
2024-05-19 00:34:11,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-05-19 00:34:12,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:12,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:12,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:13,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:13,268 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:13,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:13,314 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-19 00:34:13,315 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-05-19 00:34:13,320 [ scc.git] DEBUG Check current status
2024-05-19 00:34:13,320 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:13,340 [ scc.git] DEBUG c6314d8a9 Merge pull request #553 from ome/pre-commit-ci-update-config
2024-05-19 00:34:13,341 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:13,385 [ scc.config] DEBUG Found remote.origin.url
2024-05-19 00:34:13,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-05-19 00:34:14,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-05-19 00:34:14,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-05-19 00:34:15,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-05-19 00:34:15,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-05-19 00:34:15,586 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:15,629 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:15,629 [ scc.git] DEBUG Resetting...
2024-05-19 00:34:15,629 [ scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-05-19 00:34:15,635 [ scc.git] DEBUG HEAD is now at b9798b6 merge master -Dorg -Snone
2024-05-19 00:34:15,636 [ scc.git] DEBUG Calling 'git submodule update --recursive'
2024-05-19 00:34:15,712 [ scc.git] DEBUG Submodule path 'omero-web': checked out 'e1b1355ebd4f9de8b855dd2c55f59d86c061a81b'
2024-05-19 00:34:15,717 [ scc.git] DEBUG Check current status
2024-05-19 00:34:15,717 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-05-19 00:34:15,722 [ scc.git] DEBUG b9798b6 merge master -Dorg -Snone
2024-05-19 00:34:15,722 [ scc.git] DEBUG Calling 'git submodule status'
2024-05-19 00:34:15,763 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-05-19 00:34:15,766 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-05-19 00:34:15,769 [ scc.git] DEBUG 53a327b85034cf09ae5e7255e6fd70b59392b680 omero-py (v5.19.2-5-g53a327b8)
2024-05-19 00:34:15,773 [ scc.git] DEBUG 5a908933161233015332dd416c325c60c5b8bd3a omero-scripts (v5.8.2-1-g5a90893)
2024-05-19 00:34:15,776 [ scc.git] DEBUG e1b1355ebd4f9de8b855dd2c55f59d86c061a81b omero-web (v5.25.0-9-ge1b1355eb)
2024-05-19 00:34:15,777 [ scc.merge] INFO Merging Pull Request(s) based on master
2024-05-19 00:34:15,778 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
2024-05-19 00:34:15,778 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
2024-05-19 00:34:15,778 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
2024-05-19 00:34:15,778 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
2024-05-19 00:34:15,778 [ scc.merge] INFO Excluding Pull Request(s) without successful status
2024-05-19 00:34:15,778 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:34:16,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-05-19 00:34:16,013 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:34:16,013 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:16,013 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:16,017 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:34:16,021 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:34:16,022 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:34:16,027 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:34:16,032 [ scc.git] DEBUG Already up to date.
2024-05-19 00:34:16,032 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:34:16,033 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:16,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:16,037 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:34:16,078 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:16,079 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:16,083 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:34:16,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-05-19 00:34:16,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-05-19 00:34:17,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-05-19 00:34:17,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-19 00:34:18,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:18,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-05-19 00:34:19,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:19,264 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-19 00:34:19,264 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:34:19,264 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-19 00:34:19,264 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:19,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:19,270 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:34:19,276 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:34:19,276 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:34:19,282 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:34:19,287 [ scc.git] DEBUG Already up to date.
2024-05-19 00:34:19,288 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-05-19 00:34:19,679 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-05-19 00:34:19,680 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD
2024-05-19 00:34:19,686 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:34:19,686 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:19,686 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:19,692 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-19 00:34:19,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:19,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsLists.py
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-05-19 00:34:19,719 [ scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-05-19 00:34:19,720 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-05-19 00:34:19,720 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-05-19 00:34:19,720 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-05-19 00:34:19,720 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++---
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++--------------------
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++-----------
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++-----
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++-----------
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++-----
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++----
2024-05-19 00:34:19,724 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++---------
2024-05-19 00:34:19,726 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-)
2024-05-19 00:34:19,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:34:19,891 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:34:19,950 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:19,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:19,955 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:20,003 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:34:20,011 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33edea53d0> has no local changes
2024-05-19 00:34:20,011 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:34:20,020 [ scc.git] DEBUG [detached HEAD 2e2ef2d] merge master -Dorg -Ssuccess-only
2024-05-19 00:34:20,021 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:20,021 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:34:20,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-05-19 00:34:20,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-05-19 00:34:21,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-05-19 00:34:21,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-19 00:34:22,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:22,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:34:23,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-05-19 00:34:23,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:23,673 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-19 00:34:24,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-05-19 00:34:24,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-05-19 00:34:25,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-05-19 00:34:25,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-05-19 00:34:25,522 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:34:25,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-19 00:34:25,522 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:25,522 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:25,527 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:34:25,531 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:34:25,531 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:34:25,535 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:34:25,539 [ scc.git] DEBUG Already up to date.
2024-05-19 00:34:25,540 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-05-19 00:34:25,949 [ scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-05-19 00:34:25,949 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD
2024-05-19 00:34:25,957 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:34:25,958 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:25,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:25,962 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-19 00:34:25,967 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:25,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-05-19 00:34:25,987 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-05-19 00:34:25,989 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:34:25,993 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++--
2024-05-19 00:34:25,995 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++-
2024-05-19 00:34:25,996 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-)
2024-05-19 00:34:26,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:34:26,152 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:34:26,196 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:26,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:26,201 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:34:26,239 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:34:26,245 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33ede3df10> has no local changes
2024-05-19 00:34:26,246 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:34:26,254 [ scc.git] DEBUG [detached HEAD d21121c] merge master -Dorg -Ssuccess-only
2024-05-19 00:34:26,254 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:34:26,255 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:34:26,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-05-19 00:34:27,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-05-19 00:34:27,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-05-19 00:34:28,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-19 00:34:28,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:29,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:34:29,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-19 00:34:30,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:30,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-05-19 00:34:30,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-05-19 00:34:30,995 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method'
2024-05-19 00:34:31,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-05-19 00:34:31,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-05-19 00:34:32,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-05-19 00:34:32,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:33,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:34:33,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-05-19 00:34:34,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-19 00:34:34,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:35,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:34:35,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-19 00:34:36,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:36,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-05-19 00:34:36,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-05-19 00:34:36,911 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command'
2024-05-19 00:34:37,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-05-19 00:34:37,377 [ scc.repo] DEBUG # ... Exclude label: exclude
2024-05-19 00:34:37,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378 HTTP/1.1" 200 None
2024-05-19 00:34:38,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/378/comments HTTP/1.1" 200 None
2024-05-19 00:34:38,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-05-19 00:34:39,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-05-19 00:34:39,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-19 00:34:40,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:40,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-05-19 00:34:41,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:41,036 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-19 00:34:41,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-05-19 00:34:42,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-05-19 00:34:42,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-19 00:34:42,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:43,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:34:43,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-19 00:34:44,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:44,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-05-19 00:34:45,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-05-19 00:34:45,232 [ scc.repo] DEBUG - PR 332 jburel 'Build conda'
2024-05-19 00:34:45,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-05-19 00:34:46,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-05-19 00:34:46,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-05-19 00:34:47,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-05-19 00:34:47,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-19 00:34:48,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:48,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-05-19 00:34:48,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:48,982 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-19 00:34:49,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-05-19 00:34:49,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-19 00:34:50,305 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:50,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-05-19 00:34:51,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:51,205 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-19 00:34:51,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-05-19 00:34:52,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-05-19 00:34:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-19 00:34:53,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:53,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-05-19 00:34:53,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:53,994 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-19 00:34:54,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-05-19 00:34:54,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-05-19 00:34:55,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-19 00:34:55,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:34:56,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-05-19 00:34:56,688 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:34:56,689 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group'
2024-05-19 00:34:57,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-05-19 00:34:57,618 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-05-19 00:34:58,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-05-19 00:34:58,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-05-19 00:34:58,554 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:34:58,555 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-19 00:34:58,555 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:34:58,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:34:58,562 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:34:58,569 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:34:58,569 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:34:58,575 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:34:58,581 [ scc.git] DEBUG Already up to date.
2024-05-19 00:34:58,581 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-05-19 00:34:59,056 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:34:59,057 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD
2024-05-19 00:34:59,063 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-05-19 00:34:59,510 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:34:59,510 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD
2024-05-19 00:34:59,516 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-05-19 00:35:00,025 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:00,026 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD
2024-05-19 00:35:00,033 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-05-19 00:35:00,424 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:00,425 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD
2024-05-19 00:35:00,433 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-05-19 00:35:00,939 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:00,940 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD
2024-05-19 00:35:00,945 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-05-19 00:35:01,328 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:01,328 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD
2024-05-19 00:35:01,334 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-05-19 00:35:01,738 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:01,738 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD
2024-05-19 00:35:01,744 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-05-19 00:35:02,266 [ scc.git] DEBUG From https://github.com/ome/omero-py
2024-05-19 00:35:02,266 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD
2024-05-19 00:35:02,271 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:35:02,271 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:02,272 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:02,276 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-19 00:35:02,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:02,295 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-05-19 00:35:02,366 [ scc.git] DEBUG Auto-merging src/omero/cli.py
2024-05-19 00:35:02,367 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-05-19 00:35:02,367 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:02,372 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++
2024-05-19 00:35:02,372 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-05-19 00:35:02,372 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-)
2024-05-19 00:35:02,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:02,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-19 00:35:02,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:02,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-05-19 00:35:02,612 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-19 00:35:02,612 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-05-19 00:35:02,627 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:02,636 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-05-19 00:35:02,636 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++
2024-05-19 00:35:02,636 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-)
2024-05-19 00:35:02,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:02,947 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-19 00:35:02,958 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:02,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-05-19 00:35:03,013 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-05-19 00:35:03,014 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:03,018 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++----
2024-05-19 00:35:03,018 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-)
2024-05-19 00:35:03,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:03,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-19 00:35:03,374 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:03,379 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-05-19 00:35:03,441 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-05-19 00:35:03,442 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-05-19 00:35:03,442 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:03,446 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-05-19 00:35:03,446 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +-
2024-05-19 00:35:03,446 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-)
2024-05-19 00:35:03,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:03,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-19 00:35:03,792 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:03,798 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-05-19 00:35:03,844 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:03,848 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-05-19 00:35:03,848 [ scc.git] DEBUG connect.py | 11 +++++++++++
2024-05-19 00:35:03,848 [ scc.git] DEBUG 2 files changed, 48 insertions(+)
2024-05-19 00:35:03,848 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml
2024-05-19 00:35:03,849 [ scc.git] DEBUG create mode 100644 connect.py
2024-05-19 00:35:04,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:04,189 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-19 00:35:04,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:04,206 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-05-19 00:35:04,302 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-05-19 00:35:04,304 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:04,308 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++
2024-05-19 00:35:04,308 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-05-19 00:35:04,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:04,597 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-05-19 00:35:04,608 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:04,614 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-05-19 00:35:04,647 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-05-19 00:35:04,648 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:04,652 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-05-19 00:35:04,652 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-)
2024-05-19 00:35:05,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:05,043 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-19 00:35:05,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:05,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-05-19 00:35:05,294 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-05-19 00:35:05,309 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:05,317 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------
2024-05-19 00:35:05,317 [ scc.git] DEBUG 1 file changed, 36 deletions(-)
2024-05-19 00:35:05,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:05,473 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:35:05,514 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:05,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:05,520 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:35:05,561 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:35:05,569 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33ecde08b0> has no local changes
2024-05-19 00:35:05,570 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:35:05,581 [ scc.git] DEBUG [detached HEAD cc3215d9] merge master -Dorg -Ssuccess-only
2024-05-19 00:35:05,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:05,582 [ scc.git] INFO Overriding base-branch from master to develop
2024-05-19 00:35:05,582 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:35:06,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-19 00:35:06,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-19 00:35:07,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-19 00:35:07,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-19 00:35:07,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-19 00:35:08,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-19 00:35:08,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-19 00:35:09,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-19 00:35:09,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:10,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-19 00:35:10,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:35:10,647 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-19 00:35:11,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-19 00:35:11,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-19 00:35:12,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-19 00:35:12,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-19 00:35:12,558 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:35:12,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-19 00:35:12,559 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:12,559 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:12,565 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-19 00:35:12,570 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:35:12,570 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-19 00:35:12,576 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-19 00:35:12,603 [ scc.git] DEBUG Already up to date.
2024-05-19 00:35:12,604 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-19 00:35:13,089 [ scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-05-19 00:35:13,089 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-05-19 00:35:13,095 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:35:13,096 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:13,096 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:13,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:35:13,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:13,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:35:13,146 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-19 00:35:13,146 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-19 00:35:13,146 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:35:13,147 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:35:13,152 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-19 00:35:13,159 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-19 00:35:13,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:13,318 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:35:13,325 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-19 00:35:13,332 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#66](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-05-19 00:35:13,337 [ scc.config] DEBUG Found github.token
2024-05-19 00:35:13,338 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-19 00:35:13,338 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:35:13,386 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:13,386 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:13,391 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:35:13,432 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:35:13,438 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33ecdc5640> has no local changes
2024-05-19 00:35:13,438 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:35:13,446 [ scc.git] DEBUG [detached HEAD 5138f76] merge master -Dorg -Ssuccess-only
2024-05-19 00:35:13,447 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:13,447 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:35:13,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-05-19 00:35:14,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-05-19 00:35:14,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-05-19 00:35:15,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None
2024-05-19 00:35:15,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:16,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:35:16,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None
2024-05-19 00:35:17,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6bba35505643d8b5095fba7c47d2b92adf36adc6?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:17,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6 HTTP/1.1" 200 None
2024-05-19 00:35:17,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba35505643d8b5095fba7c47d2b92adf36adc6/status HTTP/1.1" 200 None
2024-05-19 00:35:17,987 [ scc.repo] DEBUG - PR 555 chris-allan 'Archive status'
2024-05-19 00:35:18,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/554 HTTP/1.1" 200 None
2024-05-19 00:35:18,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-05-19 00:35:19,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-05-19 00:35:19,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-05-19 00:35:20,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-19 00:35:20,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:21,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:35:21,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-19 00:35:22,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:22,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-05-19 00:35:23,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-05-19 00:35:23,009 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-19 00:35:23,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-05-19 00:35:23,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-05-19 00:35:24,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-19 00:35:24,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:25,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:35:25,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-19 00:35:26,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:26,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-05-19 00:35:27,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-05-19 00:35:27,125 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-19 00:35:27,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-05-19 00:35:28,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-05-19 00:35:28,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-05-19 00:35:29,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:35:29,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:35:29,525 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:35:29,525 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-19 00:35:29,525 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:29,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:29,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:35:29,534 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:35:29,534 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:35:29,566 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:35:29,616 [ scc.git] DEBUG Updating e1b1355eb..c6314d8a9
2024-05-19 00:35:30,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/553 HTTP/1.1" 200 None
2024-05-19 00:35:30,777 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/533 HTTP/1.1" 200 None
2024-05-19 00:35:31,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/542 HTTP/1.1" 200 None
2024-05-19 00:35:31,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/543 HTTP/1.1" 200 None
2024-05-19 00:35:32,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls/549 HTTP/1.1" 200 None
2024-05-19 00:35:32,519 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-05-19 00:35:33,131 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-19 00:35:33,131 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD
2024-05-19 00:35:33,138 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-05-19 00:35:33,579 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-19 00:35:33,580 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD
2024-05-19 00:35:33,586 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-05-19 00:35:34,250 [ scc.git] DEBUG From https://github.com/ome/omero-web
2024-05-19 00:35:34,250 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-05-19 00:35:34,256 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:35:34,257 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:34,257 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:34,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-19 00:35:34,269 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:34,274 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-05-19 00:35:34,365 [ scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-05-19 00:35:34,365 [ scc.git] DEBUG Auto-merging setup.py
2024-05-19 00:35:34,366 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:34,370 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-05-19 00:35:34,371 [ scc.git] DEBUG setup.py | 1 +
2024-05-19 00:35:34,371 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-)
2024-05-19 00:35:34,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:34,541 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-19 00:35:34,548 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:34,553 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-05-19 00:35:34,624 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-05-19 00:35:34,624 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-19 00:35:34,625 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:34,630 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +-
2024-05-19 00:35:34,631 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++--
2024-05-19 00:35:34,631 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-)
2024-05-19 00:35:34,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:34,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6bba35505643d8b5095fba7c47d2b92adf36adc6'
2024-05-19 00:35:34,973 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:34,978 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 6bba35505643d8b5095fba7c47d2b92adf36adc6'
2024-05-19 00:35:34,998 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-05-19 00:35:34,999 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:35:35,004 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.tree.js | 2 ++
2024-05-19 00:35:35,004 [ scc.git] DEBUG omeroweb/webclient/tree.py | 7 +++++--
2024-05-19 00:35:35,004 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 1 +
2024-05-19 00:35:35,004 [ scc.git] DEBUG 3 files changed, 8 insertions(+), 2 deletions(-)
2024-05-19 00:35:35,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:35,375 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:35:35,417 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:35:35,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:35:35,422 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:35:35,464 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:35:35,476 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33ecdf3910> has no local changes
2024-05-19 00:35:35,476 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating e1b1355eb..c6314d8a9
Previously merged:
- PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 533 jburel 'use conda-forge channel'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
- PR 543 knabar 'Block UI for some long running tasks'
- PR 549 knabar 'Remove webgateway cache'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:35:35,489 [ scc.git] DEBUG [detached HEAD c550ce218] merge master -Dorg -Ssuccess-only
2024-05-19 00:35:35,489 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:35,489 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:35:35,548 [ scc.config] DEBUG Found submodule.omero-dropbox.url
2024-05-19 00:35:35,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:35,801 [ scc.config] DEBUG Found submodule.omero-marshal.url
2024-05-19 00:35:36,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:36,216 [ scc.config] DEBUG Found submodule.omero-py.url
2024-05-19 00:35:36,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:36,626 [ scc.config] DEBUG Found submodule.omero-scripts.url
2024-05-19 00:35:37,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:37,050 [ scc.config] DEBUG Found submodule.omero-web.url
2024-05-19 00:35:37,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:35:37,451 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:35:37,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f33edf39e80> has local changes
2024-05-19 00:35:37,484 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-python-superbuild
Already up to date.
Repository: ome/omero-dropbox
Already up to date.
Merged PRs:
- PR 16 joshmoore 'Review all instances of whitelist/blacklist'
Repository: ome/omero-marshal
Excluded PRs:
- PR 34 chris-allan 'Initial support for Event' (exclude comment)
- PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.
Merged PRs:
- PR 69 will-moore 'Roi encoder allows Shape None'
Repository: ome/omero-py
Excluded PRs:
- PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
- PR 387 will-moore 'Numpy pixels type' (label: exclude)
- PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
- PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
- PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
- PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.
Merged PRs:
- PR 199 joshmoore 'user: allow setting default group'
- PR 207 manics 'BlitzGateway.connect raise on error'
- PR 266 joshmoore 'errors: use raise_error from cli plugins'
- PR 299 joshmoore 'Add parents and children to omero obj'
- PR 332 jburel 'Build conda'
- PR 337 will-moore 'bulk.yml depth is passed to xargs'
- PR 391 joshmoore 'Add jstack command'
- PR 408 jburel 'remove deprecated method'
Repository: ome/omero-scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Repository: ome/omero-web
Excluded PRs:
- PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
- PR 535 will-moore 'Initial working browser history' (stage: draft)
- PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Updating e1b1355eb..c6314d8a9
Previously merged:
- PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
- PR 533 jburel 'use conda-forge channel'
- PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
- PR 543 knabar 'Block UI for some long running tasks'
- PR 549 knabar 'Remove webgateway cache'
Merged PRs:
- PR 527 will-moore 'Add some initial CSP settings to test'
- PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
- PR 555 chris-allan 'Archive status'
Generated by OMERO-python-superbuild-push#66 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/66/)'
2024-05-19 00:35:37,503 [ scc.git] DEBUG [detached HEAD 9cdacb0] merge master -Dorg -Ssuccess-only
2024-05-19 00:35:37,503 [ scc.merge] INFO Repository: ome/omero-python-superbuild
2024-05-19 00:35:37,503 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-)
2024-05-19 00:35:37,503 [ scc.merge] INFO Already up to date.
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Repository: ome/omero-dropbox
2024-05-19 00:35:37,504 [ scc.merge] INFO Already up to date.
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Merged PRs:
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Repository: ome/omero-marshal
2024-05-19 00:35:37,504 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-05-19 00:35:37,504 [ scc.merge] INFO Already up to date.
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Merged PRs:
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None'
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Repository: ome/omero-py
2024-05-19 00:35:37,504 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 378 ehrenfeu 'Fix UnicodeDecodeError' (user: ehrenfeu)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-05-19 00:35:37,504 [ scc.merge] INFO Already up to date.
2024-05-19 00:35:37,504 [ scc.merge] INFO
2024-05-19 00:35:37,504 [ scc.merge] INFO Merged PRs:
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group'
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error'
2024-05-19 00:35:37,504 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 332 jburel 'Build conda'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method'
2024-05-19 00:35:37,505 [ scc.merge] INFO
2024-05-19 00:35:37,505 [ scc.merge] INFO Repository: ome/omero-scripts
2024-05-19 00:35:37,505 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-19 00:35:37,505 [ scc.merge] INFO Already up to date.
2024-05-19 00:35:37,505 [ scc.merge] INFO
2024-05-19 00:35:37,505 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-19 00:35:37,505 [ scc.merge] INFO
2024-05-19 00:35:37,505 [ scc.merge] INFO Repository: ome/omero-web
2024-05-19 00:35:37,505 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 554 chris-allan 'Optimize obj_id_bitmask by using its own query' (stage: draft)
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-05-19 00:35:37,505 [ scc.merge] INFO Updating e1b1355eb..c6314d8a9
2024-05-19 00:35:37,505 [ scc.merge] INFO Previously merged:
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 553 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 533 jburel 'use conda-forge channel'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 542 Tom-TBT 'PlateAcquisition filtering with plate display'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 543 knabar 'Block UI for some long running tasks'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 549 knabar 'Remove webgateway cache'
2024-05-19 00:35:37,505 [ scc.merge] INFO
2024-05-19 00:35:37,505 [ scc.merge] INFO Merged PRs:
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-05-19 00:35:37,505 [ scc.merge] INFO - PR 555 chris-allan 'Archive status'
2024-05-19 00:35:37,505 [ scc.merge] INFO
2024-05-19 00:35:37,506 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-19 00:35:37,506 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,512 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-05-19 00:35:37,512 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,517 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:37,518 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-05-19 00:35:37,518 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:37,522 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-05-19 00:35:37,522 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,526 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:37,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-05-19 00:35:37,527 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-05-19 00:35:37,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-05-19 00:35:37,531 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:35:37,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
download_blitz_target()
File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
resp = urlopen(loc)
File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
return opener.open(url, data, timeout)
File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
response = meth(req, response)
File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
response = self.parent.error(
File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
return self._call_chain(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
result = func(*args)
File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
grep: build.gradle: No such file or directory
Up-to-date:
Up-to-date:
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 53a327b8
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from e1b1355eb
nothing to commit, working tree clean
HEAD detached from ee4b0ba
nothing to commit, working tree clean
2024-05-19 00:36:08,156 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
![[Jenkins]](/jenkins/static/b864b239/images/svgs/logo.svg){kind=logo}
