00:44:49 Started by upstream project "Trigger" build number 129
00:44:49 originally caused by:
00:44:49 Started by timer
00:44:49 Running as SYSTEM
00:44:49 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
00:44:49 [OMERO-server] $ /bin/bash -xe /tmp/jenkins11329019982800282989.sh
00:44:49 + source /home/settings.env
00:44:49 ++ OMERO_DB_HOST=pg
00:44:49 ++ OMERO_DB_USER=postgres
00:44:49 ++ OMERO_DB_PASS=
00:44:49 ++ OMERO_ROOT_PASS=omero
00:44:49 ++ OMERO_DATA_DIR=/OMERO
00:44:49 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:44:49 + OMERO_DB_NAME=OMERO-server
00:44:49 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:44:49 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:44:49 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:44:49 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:44:49 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
00:44:49 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:44:49 ++ deactivate nondestructive
00:44:49 ++ '[' -n '' ']'
00:44:49 ++ '[' -n '' ']'
00:44:49 ++ hash -r
00:44:49 ++ '[' -n '' ']'
00:44:49 ++ unset VIRTUAL_ENV
00:44:49 ++ unset VIRTUAL_ENV_PROMPT
00:44:49 ++ '[' '!' nondestructive = nondestructive ']'
00:44:49 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:44:49 ++ export VIRTUAL_ENV
00:44:49 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:44:49 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:44:49 ++ export PATH
00:44:49 ++ '[' -n '' ']'
00:44:49 ++ '[' -z '' ']'
00:44:49 ++ _OLD_VIRTUAL_PS1=
00:44:49 ++ PS1='(.venv3) '
00:44:49 ++ export PS1
00:44:49 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:44:49 ++ export VIRTUAL_ENV_PROMPT
00:44:49 ++ hash -r
00:44:49 + omero admin stop
00:44:51 Waiting on shutdown. Use CTRL-C to exit
00:44:51 .+ sleep 5
00:45:06 + deactivate
00:45:06 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:45:06 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:45:06 + export PATH
00:45:06 + unset _OLD_VIRTUAL_PATH
00:45:06 + '[' -n '' ']'
00:45:06 + hash -r
00:45:06 + '[' -n '' ']'
00:45:06 + unset VIRTUAL_ENV
00:45:06 + unset VIRTUAL_ENV_PROMPT
00:45:06 + '[' '!' '' = nondestructive ']'
00:45:06 + unset -f deactivate
00:45:06 + rm -rf /home/omero/workspace/OMERO-server/.venv3
00:45:07 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
00:45:11 + '[' false = true ']'
00:45:11 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
00:45:11 Skipping PURGE_DATA:CleanDbAndRepo
00:45:11 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.31.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
00:45:13 Copied 1 artifact from "OMERO-build" build number 99
00:45:13 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 95
00:45:13 Copied 2 artifacts from "OMERO-build-build" build number 103
00:45:13 Copied 1 artifact from "OMERO-zarr-pixel-buffer-build" build number 91
00:45:13 [OMERO-server] $ /bin/bash -xe /tmp/jenkins12942298332942034292.sh
00:45:13 + source /home/settings.env
00:45:13 ++ OMERO_DB_HOST=pg
00:45:13 ++ OMERO_DB_USER=postgres
00:45:13 ++ OMERO_DB_PASS=
00:45:13 ++ OMERO_ROOT_PASS=omero
00:45:13 ++ OMERO_DATA_DIR=/OMERO
00:45:13 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:45:13 + OMERO_DB_NAME=OMERO-server
00:45:13 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:45:13 + mkdir -p /home/omero/omero-server-data
00:45:13 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:45:13 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:45:13 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:45:13 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:45:13 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:45:13 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:45:13 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:45:13 ++ ls OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99.zip
00:45:13 + ZIP=OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99.zip
00:45:13 + '[' '!' -z '' ']'
00:45:13 + DIST=OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99
00:45:13 + unzip OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99.zip
00:45:13 Archive: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99.zip
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/blitz/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/grid/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/profiles/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/error/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/grid/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/janelia/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/matplotlib/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/ncsa_paledit/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/seaborn/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/luts/wcif/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/analysis_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/annotation_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/export_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/figure_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/import_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/scripts/omero/util_scripts/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/server/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/share/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/share/licenses/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/misc/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__1/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__10/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__11/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__2/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__3/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__4/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__5/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__6/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__7/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__8/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3A__9/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3__4/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3__5/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3__6/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO3__7/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4.1__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4.2__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4.2__0/t/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4.3__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4.4__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO4__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.0__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.1__1/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.2__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__1/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__2/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__3/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/var/
00:45:13 creating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/var/tmp/
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/LICENSE.txt
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/backup.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/blitz/mail-senders.example
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/blitz/mail-server.example
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/build.properties
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/env.bat
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/env.sh
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/hibernate.properties
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/ice.config
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/logback-cli.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/logback-indexing-cli.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/logback-indexing.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/logback.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/mime.types
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/node1.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/node2.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/omero.properties
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/profiles/psql
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/rollover.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/Windows.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/error/maintainance.html
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/grid/README
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/grid/default.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/grid/templates.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/grid/windefault.xml
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/ice.config
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/internal.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/master.cfg
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/templates/robot.template
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/etc/testdropbox.config
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/history.rst
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/OMEZarrReader.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/accessors-smart.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/activation.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aggdesigner-algorithm.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aircompressor.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/antlr.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aopalliance.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/apiguardian-api.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/asm.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/avatica-core.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/avatica-metrics.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aws-java-sdk-core.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aws-java-sdk-kms.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/aws-java-sdk-s3.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/base.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-anim.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-awt-util.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-bridge.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-codec.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-constants.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-css.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-dom.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-ext.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-gvt.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-i18n.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-parser.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-script.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-shared-resources.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-svg-dom.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-svggen.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-transcoder.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-util.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/batik-xml.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/btm.jar
00:45:13 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/lib/client/calcite-core.jar
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00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/psql-footer.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/psql-header.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/schema.sql
00:45:15 inflating: OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99/sql/psql/OMERO5.4__0/views.sql
00:45:15 + rm -f OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99.zip
00:45:15 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-594-116d0d2bd7-ice36-b99 /home/omero/workspace/OMERO-server/OMERO.server
00:45:15 + jacksonVersion=2.20.0
00:45:15 + awsSdkVersion=2.34.6
00:45:15 + reactiveStreamsVersion=1.0.4
00:45:15 + zarrJavaVersion=0.1.0
00:45:15 + rm -f '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/omero-zarr-pixel-buffer*.jar' '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jzarr.jar '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3fs*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-kms.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3.jar
00:45:15 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:45:15 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:15 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:15 --2026-04-04 00:45:15-- https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:45:15 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:15 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:45:15 HTTP request sent, awaiting response... 200 OK
00:45:15 Length: 889211 (868K) [application/java-archive]
00:45:15 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’
00:45:15
00:45:15 0K .......... .......... .......... .......... .......... 5% 14.1M 0s
00:45:15 50K .......... .......... .......... .......... .......... 11% 3.32M 0s
00:45:15 100K .......... .......... .......... .......... .......... 17% 10.7M 0s
00:45:15 150K .......... .......... .......... .......... .......... 23% 3.86M 0s
00:45:15 200K .......... .......... .......... .......... .......... 28% 16.9M 0s
00:45:15 250K .......... .......... .......... .......... .......... 34% 10.7M 0s
00:45:16 300K .......... .......... .......... .......... .......... 40% 16.4M 0s
00:45:16 350K .......... .......... .......... .......... .......... 46% 15.2M 0s
00:45:16 400K .......... .......... .......... .......... .......... 51% 13.5M 0s
00:45:16 450K .......... .......... .......... .......... .......... 57% 17.7M 0s
00:45:16 500K .......... .......... .......... .......... .......... 63% 13.6M 0s
00:45:16 550K .......... .......... .......... .......... .......... 69% 10.2M 0s
00:45:16 600K .......... .......... .......... .......... .......... 74% 15.2M 0s
00:45:16 650K .......... .......... .......... .......... .......... 80% 28.4M 0s
00:45:16 700K .......... .......... .......... .......... .......... 86% 17.5M 0s
00:45:16 750K .......... .......... .......... .......... .......... 92% 10.7M 0s
00:45:16 800K .......... .......... .......... .......... .......... 97% 12.8M 0s
00:45:16 850K .......... ........ 100% 164M=0.08s
00:45:16
00:45:16 2026-04-04 00:45:16 (10.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’ saved [889211/889211]
00:45:16
00:45:16 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
00:45:16 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:16 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:16 --2026-04-04 00:45:16-- https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
00:45:16 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:16 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
00:45:16 HTTP request sent, awaiting response... 200 OK
00:45:16 Length: 183560 (179K) [application/java-archive]
00:45:16 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’
00:45:16
00:45:16 0K .......... .......... .......... .......... .......... 27% 15.3M 0s
00:45:16 50K .......... .......... .......... .......... .......... 55% 3.14M 0s
00:45:16 100K .......... .......... .......... .......... .......... 83% 3.57M 0s
00:45:16 150K .......... .......... ......... 100% 13.3M=0.03s
00:45:16
00:45:16 2026-04-04 00:45:16 (5.06 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’ saved [183560/183560]
00:45:16
00:45:16 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:45:16 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:16 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:16 --2026-04-04 00:45:16-- https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:45:16 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:16 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:16 HTTP request sent, awaiting response... 200 OK
00:45:16 Length: 1732435 (1.7M) [application/java-archive]
00:45:16 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’
00:45:16
00:45:16 0K .......... .......... .......... .......... .......... 2% 15.4M 0s
00:45:16 50K .......... .......... .......... .......... .......... 5% 3.32M 0s
00:45:16 100K .......... .......... .......... .......... .......... 8% 3.40M 0s
00:45:16 150K .......... .......... .......... .......... .......... 11% 15.5M 0s
00:45:16 200K .......... .......... .......... .......... .......... 14% 10.6M 0s
00:45:16 250K .......... .......... .......... .......... .......... 17% 13.8M 0s
00:45:16 300K .......... .......... .......... .......... .......... 20% 13.5M 0s
00:45:16 350K .......... .......... .......... .......... .......... 23% 16.4M 0s
00:45:16 400K .......... .......... .......... .......... .......... 26% 17.0M 0s
00:45:16 450K .......... .......... .......... .......... .......... 29% 15.0M 0s
00:45:16 500K .......... .......... .......... .......... .......... 32% 13.9M 0s
00:45:16 550K .......... .......... .......... .......... .......... 35% 18.5M 0s
00:45:16 600K .......... .......... .......... .......... .......... 38% 8.53M 0s
00:45:16 650K .......... .......... .......... .......... .......... 41% 21.7M 0s
00:45:16 700K .......... .......... .......... .......... .......... 44% 23.9M 0s
00:45:16 750K .......... .......... .......... .......... .......... 47% 7.96M 0s
00:45:16 800K .......... .......... .......... .......... .......... 50% 102M 0s
00:45:16 850K .......... .......... .......... .......... .......... 53% 14.0M 0s
00:45:16 900K .......... .......... .......... .......... .......... 56% 25.1M 0s
00:45:16 950K .......... .......... .......... .......... .......... 59% 16.0M 0s
00:45:16 1000K .......... .......... .......... .......... .......... 62% 6.86M 0s
00:45:16 1050K .......... .......... .......... .......... .......... 65% 79.5M 0s
00:45:16 1100K .......... .......... .......... .......... .......... 67% 13.8M 0s
00:45:16 1150K .......... .......... .......... .......... .......... 70% 24.8M 0s
00:45:16 1200K .......... .......... .......... .......... .......... 73% 15.9M 0s
00:45:16 1250K .......... .......... .......... .......... .......... 76% 11.0M 0s
00:45:16 1300K .......... .......... .......... .......... .......... 79% 14.6M 0s
00:45:16 1350K .......... .......... .......... .......... .......... 82% 14.8M 0s
00:45:16 1400K .......... .......... .......... .......... .......... 85% 18.6M 0s
00:45:16 1450K .......... .......... .......... .......... .......... 88% 10.6M 0s
00:45:16 1500K .......... .......... .......... .......... .......... 91% 16.4M 0s
00:45:16 1550K .......... .......... .......... .......... .......... 94% 12.5M 0s
00:45:16 1600K .......... .......... .......... .......... .......... 97% 19.9M 0s
00:45:16 1650K .......... .......... .......... .......... . 100% 18.7M=0.1s
00:45:16
00:45:16 2026-04-04 00:45:16 (12.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’ saved [1732435/1732435]
00:45:16
00:45:16 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:45:16 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:16 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:16 --2026-04-04 00:45:16-- https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:45:16 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:16 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:17 HTTP request sent, awaiting response... 200 OK
00:45:17 Length: 331034 (323K) [application/java-archive]
00:45:17 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’
00:45:17
00:45:17 0K .......... .......... .......... .......... .......... 15% 15.3M 0s
00:45:17 50K .......... .......... .......... .......... .......... 30% 3.17M 0s
00:45:17 100K .......... .......... .......... .......... .......... 46% 13.4M 0s
00:45:17 150K .......... .......... .......... .......... .......... 61% 4.01M 0s
00:45:17 200K .......... .......... .......... .......... .......... 77% 13.2M 0s
00:45:17 250K .......... .......... .......... .......... .......... 92% 10.7M 0s
00:45:17 300K .......... .......... ... 100% 23.5M=0.04s
00:45:17
00:45:17 2026-04-04 00:45:17 (7.23 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’ saved [331034/331034]
00:45:17
00:45:17 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:45:17 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:17 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:17 --2026-04-04 00:45:17-- https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:45:17 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:17 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:17 HTTP request sent, awaiting response... 200 OK
00:45:17 Length: 36400 (36K) [application/java-archive]
00:45:17 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’
00:45:17
00:45:17 0K .......... .......... .......... ..... 100% 17.7M=0.002s
00:45:17
00:45:17 2026-04-04 00:45:17 (17.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’ saved [36400/36400]
00:45:17
00:45:17 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:45:17 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:17 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:17 --2026-04-04 00:45:17-- https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:45:17 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:17 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:17 HTTP request sent, awaiting response... 200 OK
00:45:17 Length: 4083366 (3.9M) [application/java-archive]
00:45:17 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’
00:45:17
00:45:17 0K .......... .......... .......... .......... .......... 1% 14.7M 0s
00:45:17 50K .......... .......... .......... .......... .......... 2% 3.18M 1s
00:45:17 100K .......... .......... .......... .......... .......... 3% 3.62M 1s
00:45:17 150K .......... .......... .......... .......... .......... 5% 17.4M 1s
00:45:17 200K .......... .......... .......... .......... .......... 6% 13.4M 1s
00:45:17 250K .......... .......... .......... .......... .......... 7% 11.1M 1s
00:45:17 300K .......... .......... .......... .......... .......... 8% 13.5M 0s
00:45:17 350K .......... .......... .......... .......... .......... 10% 16.1M 0s
00:45:17 400K .......... .......... .......... .......... .......... 11% 16.9M 0s
00:45:17 450K .......... .......... .......... .......... .......... 12% 18.4M 0s
00:45:17 500K .......... .......... .......... .......... .......... 13% 12.4M 0s
00:45:17 550K .......... .......... .......... .......... .......... 15% 11.0M 0s
00:45:17 600K .......... .......... .......... .......... .......... 16% 19.7M 0s
00:45:17 650K .......... .......... .......... .......... .......... 17% 13.6M 0s
00:45:17 700K .......... .......... .......... .......... .......... 18% 30.4M 0s
00:45:17 750K .......... .......... .......... .......... .......... 20% 12.0M 0s
00:45:17 800K .......... .......... .......... .......... .......... 21% 11.4M 0s
00:45:17 850K .......... .......... .......... .......... .......... 22% 18.1M 0s
00:45:17 900K .......... .......... .......... .......... .......... 23% 12.1M 0s
00:45:17 950K .......... .......... .......... .......... .......... 25% 45.5M 0s
00:45:17 1000K .......... .......... .......... .......... .......... 26% 9.72M 0s
00:45:17 1050K .......... .......... .......... .......... .......... 27% 14.2M 0s
00:45:17 1100K .......... .......... .......... .......... .......... 28% 17.7M 0s
00:45:17 1150K .......... .......... .......... .......... .......... 30% 12.6M 0s
00:45:17 1200K .......... .......... .......... .......... .......... 31% 42.7M 0s
00:45:17 1250K .......... .......... .......... .......... .......... 32% 9.45M 0s
00:45:17 1300K .......... .......... .......... .......... .......... 33% 34.2M 0s
00:45:17 1350K .......... .......... .......... .......... .......... 35% 10.8M 0s
00:45:17 1400K .......... .......... .......... .......... .......... 36% 12.6M 0s
00:45:17 1450K .......... .......... .......... .......... .......... 37% 28.1M 0s
00:45:17 1500K .......... .......... .......... .......... .......... 38% 10.8M 0s
00:45:17 1550K .......... .......... .......... .......... .......... 40% 21.0M 0s
00:45:17 1600K .......... .......... .......... .......... .......... 41% 13.4M 0s
00:45:17 1650K .......... .......... .......... .......... .......... 42% 15.0M 0s
00:45:17 1700K .......... .......... .......... .......... .......... 43% 21.6M 0s
00:45:17 1750K .......... .......... .......... .......... .......... 45% 10.0M 0s
00:45:17 1800K .......... .......... .......... .......... .......... 46% 16.6M 0s
00:45:17 1850K .......... .......... .......... .......... .......... 47% 17.0M 0s
00:45:17 1900K .......... .......... .......... .......... .......... 48% 13.2M 0s
00:45:17 1950K .......... .......... .......... .......... .......... 50% 19.2M 0s
00:45:17 2000K .......... .......... .......... .......... .......... 51% 14.5M 0s
00:45:17 2050K .......... .......... .......... .......... .......... 52% 18.0M 0s
00:45:17 2100K .......... .......... .......... .......... .......... 53% 17.3M 0s
00:45:17 2150K .......... .......... .......... .......... .......... 55% 10.3M 0s
00:45:17 2200K .......... .......... .......... .......... .......... 56% 19.0M 0s
00:45:17 2250K .......... .......... .......... .......... .......... 57% 14.7M 0s
00:45:17 2300K .......... .......... .......... .......... .......... 58% 19.0M 0s
00:45:17 2350K .......... .......... .......... .......... .......... 60% 16.6M 0s
00:45:17 2400K .......... .......... .......... .......... .......... 61% 14.1M 0s
00:45:17 2450K .......... .......... .......... .......... .......... 62% 15.9M 0s
00:45:17 2500K .......... .......... .......... .......... .......... 63% 17.4M 0s
00:45:17 2550K .......... .......... .......... .......... .......... 65% 12.4M 0s
00:45:17 2600K .......... .......... .......... .......... .......... 66% 13.4M 0s
00:45:17 2650K .......... .......... .......... .......... .......... 67% 17.0M 0s
00:45:17 2700K .......... .......... .......... .......... .......... 68% 16.7M 0s
00:45:17 2750K .......... .......... .......... .......... .......... 70% 17.3M 0s
00:45:17 2800K .......... .......... .......... .......... .......... 71% 16.7M 0s
00:45:17 2850K .......... .......... .......... .......... .......... 72% 13.2M 0s
00:45:17 2900K .......... .......... .......... .......... .......... 73% 17.1M 0s
00:45:17 2950K .......... .......... .......... .......... .......... 75% 10.5M 0s
00:45:17 3000K .......... .......... .......... .......... .......... 76% 22.6M 0s
00:45:17 3050K .......... .......... .......... .......... .......... 77% 13.3M 0s
00:45:17 3100K .......... .......... .......... .......... .......... 78% 17.0M 0s
00:45:17 3150K .......... .......... .......... .......... .......... 80% 17.2M 0s
00:45:17 3200K .......... .......... .......... .......... .......... 81% 15.7M 0s
00:45:17 3250K .......... .......... .......... .......... .......... 82% 13.5M 0s
00:45:17 3300K .......... .......... .......... .......... .......... 84% 13.3M 0s
00:45:17 3350K .......... .......... .......... .......... .......... 85% 16.4M 0s
00:45:17 3400K .......... .......... .......... .......... .......... 86% 17.4M 0s
00:45:17 3450K .......... .......... .......... .......... .......... 87% 14.4M 0s
00:45:17 3500K .......... .......... .......... .......... .......... 89% 14.8M 0s
00:45:17 3550K .......... .......... .......... .......... .......... 90% 13.1M 0s
00:45:17 3600K .......... .......... .......... .......... .......... 91% 27.9M 0s
00:45:17 3650K .......... .......... .......... .......... .......... 92% 15.8M 0s
00:45:17 3700K .......... .......... .......... .......... .......... 94% 11.6M 0s
00:45:17 3750K .......... .......... .......... .......... .......... 95% 14.4M 0s
00:45:17 3800K .......... .......... .......... .......... .......... 96% 11.8M 0s
00:45:17 3850K .......... .......... .......... .......... .......... 97% 19.7M 0s
00:45:17 3900K .......... .......... .......... .......... .......... 99% 26.3M 0s
00:45:17 3950K .......... .......... .......... ....... 100% 17.1M=0.3s
00:45:17
00:45:17 2026-04-04 00:45:17 (13.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’ saved [4083366/4083366]
00:45:17
00:45:17 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:45:17 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:17 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:17 --2026-04-04 00:45:17-- https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:45:18 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:18 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:18 HTTP request sent, awaiting response... 200 OK
00:45:18 Length: 234962 (229K) [application/java-archive]
00:45:18 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’
00:45:18
00:45:18 0K .......... .......... .......... .......... .......... 21% 16.5M 0s
00:45:18 50K .......... .......... .......... .......... .......... 43% 3.21M 0s
00:45:18 100K .......... .......... .......... .......... .......... 65% 10.8M 0s
00:45:18 150K .......... .......... .......... .......... .......... 87% 4.11M 0s
00:45:18 200K .......... .......... ......... 100% 15.4M=0.04s
00:45:18
00:45:18 2026-04-04 00:45:18 (6.16 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’ saved [234962/234962]
00:45:18
00:45:18 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:45:18 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:18 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:18 --2026-04-04 00:45:18-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:45:18 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:18 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:18 HTTP request sent, awaiting response... 200 OK
00:45:18 Length: 192161 (188K) [application/java-archive]
00:45:18 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’
00:45:18
00:45:18 0K .......... .......... .......... .......... .......... 26% 16.2M 0s
00:45:18 50K .......... .......... .......... .......... .......... 53% 3.24M 0s
00:45:18 100K .......... .......... .......... .......... .......... 79% 11.5M 0s
00:45:18 150K .......... .......... .......... ....... 100% 3.28M=0.03s
00:45:18
00:45:18 2026-04-04 00:45:18 (5.47 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’ saved [192161/192161]
00:45:18
00:45:18 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:45:18 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:18 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:18 --2026-04-04 00:45:18-- https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:45:18 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:18 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:18 HTTP request sent, awaiting response... 200 OK
00:45:18 Length: 1037104 (1013K) [application/java-archive]
00:45:18 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’
00:45:18
00:45:18 0K .......... .......... .......... .......... .......... 4% 15.7M 0s
00:45:18 50K .......... .......... .......... .......... .......... 9% 3.27M 0s
00:45:18 100K .......... .......... .......... .......... .......... 14% 10.9M 0s
00:45:18 150K .......... .......... .......... .......... .......... 19% 4.17M 0s
00:45:18 200K .......... .......... .......... .......... .......... 24% 10.5M 0s
00:45:18 250K .......... .......... .......... .......... .......... 29% 13.2M 0s
00:45:18 300K .......... .......... .......... .......... .......... 34% 17.6M 0s
00:45:18 350K .......... .......... .......... .......... .......... 39% 15.3M 0s
00:45:18 400K .......... .......... .......... .......... .......... 44% 17.6M 0s
00:45:18 450K .......... .......... .......... .......... .......... 49% 13.3M 0s
00:45:18 500K .......... .......... .......... .......... .......... 54% 17.1M 0s
00:45:18 550K .......... .......... .......... .......... .......... 59% 17.3M 0s
00:45:18 600K .......... .......... .......... .......... .......... 64% 8.40M 0s
00:45:18 650K .......... .......... .......... .......... .......... 69% 26.6M 0s
00:45:18 700K .......... .......... .......... .......... .......... 74% 18.1M 0s
00:45:18 750K .......... .......... .......... .......... .......... 78% 16.3M 0s
00:45:18 800K .......... .......... .......... .......... .......... 83% 11.1M 0s
00:45:18 850K .......... .......... .......... .......... .......... 88% 25.3M 0s
00:45:18 900K .......... .......... .......... .......... .......... 93% 16.2M 0s
00:45:18 950K .......... .......... .......... .......... .......... 98% 21.3M 0s
00:45:18 1000K .......... .. 100% 8.28M=0.09s
00:45:18
00:45:18 2026-04-04 00:45:18 (11.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’ saved [1037104/1037104]
00:45:18
00:45:18 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:45:18 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:18 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:18 --2026-04-04 00:45:18-- https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:45:19 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:19 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:19 HTTP request sent, awaiting response... 200 OK
00:45:19 Length: 13758 (13K) [application/java-archive]
00:45:19 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’
00:45:19
00:45:19 0K .......... ... 100% 53.7M=0s
00:45:19
00:45:19 2026-04-04 00:45:19 (53.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’ saved [13758/13758]
00:45:19
00:45:19 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:45:19 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:19 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:19 --2026-04-04 00:45:19-- https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:45:19 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:19 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:19 HTTP request sent, awaiting response... 200 OK
00:45:19 Length: 962220 (940K) [application/java-archive]
00:45:19 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’
00:45:19
00:45:19 0K .......... .......... .......... .......... .......... 5% 15.0M 0s
00:45:19 50K .......... .......... .......... .......... .......... 10% 3.31M 0s
00:45:19 100K .......... .......... .......... .......... .......... 15% 3.47M 0s
00:45:19 150K .......... .......... .......... .......... .......... 21% 13.7M 0s
00:45:19 200K .......... .......... .......... .......... .......... 26% 13.1M 0s
00:45:19 250K .......... .......... .......... .......... .......... 31% 10.7M 0s
00:45:19 300K .......... .......... .......... .......... .......... 37% 17.3M 0s
00:45:19 350K .......... .......... .......... .......... .......... 42% 16.4M 0s
00:45:19 400K .......... .......... .......... .......... .......... 47% 17.4M 0s
00:45:19 450K .......... .......... .......... .......... .......... 53% 16.8M 0s
00:45:19 500K .......... .......... .......... .......... .......... 58% 17.4M 0s
00:45:19 550K .......... .......... .......... .......... .......... 63% 10.6M 0s
00:45:19 600K .......... .......... .......... .......... .......... 69% 10.2M 0s
00:45:19 650K .......... .......... .......... .......... .......... 74% 24.9M 0s
00:45:19 700K .......... .......... .......... .......... .......... 79% 23.2M 0s
00:45:19 750K .......... .......... .......... .......... .......... 85% 18.0M 0s
00:45:19 800K .......... .......... .......... .......... .......... 90% 8.17M 0s
00:45:19 850K .......... .......... .......... .......... .......... 95% 27.8M 0s
00:45:19 900K .......... .......... .......... ......... 100% 11.2M=0.09s
00:45:19
00:45:19 2026-04-04 00:45:19 (10.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’ saved [962220/962220]
00:45:19
00:45:19 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:45:19 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:19 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:19 --2026-04-04 00:45:19-- https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:45:19 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:19 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:19 HTTP request sent, awaiting response... 200 OK
00:45:19 Length: 30963 (30K) [application/java-archive]
00:45:19 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’
00:45:19
00:45:19 0K .......... .......... .......... 100% 24.5M=0.001s
00:45:19
00:45:19 2026-04-04 00:45:19 (24.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’ saved [30963/30963]
00:45:19
00:45:19 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:45:19 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:19 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:19 --2026-04-04 00:45:19-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:45:19 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:20 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:20 HTTP request sent, awaiting response... 200 OK
00:45:20 Length: 241618 (236K) [application/java-archive]
00:45:20 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’
00:45:20
00:45:20 0K .......... .......... .......... .......... .......... 21% 16.4M 0s
00:45:20 50K .......... .......... .......... .......... .......... 42% 3.23M 0s
00:45:20 100K .......... .......... .......... .......... .......... 63% 11.6M 0s
00:45:20 150K .......... .......... .......... .......... .......... 84% 4.04M 0s
00:45:20 200K .......... .......... .......... ..... 100% 12.7M=0.04s
00:45:20
00:45:20 2026-04-04 00:45:20 (6.20 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’ saved [241618/241618]
00:45:20
00:45:20 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:45:20 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:20 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:20 --2026-04-04 00:45:20-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:45:20 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:20 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:20 HTTP request sent, awaiting response... 200 OK
00:45:20 Length: 91685 (90K) [application/java-archive]
00:45:20 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’
00:45:20
00:45:20 0K .......... .......... .......... .......... .......... 55% 17.5M 0s
00:45:20 50K .......... .......... .......... ......... 100% 2.69M=0.02s
00:45:20
00:45:20 2026-04-04 00:45:20 (5.10 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’ saved [91685/91685]
00:45:20
00:45:20 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:45:20 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:20 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:20 --2026-04-04 00:45:20-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:45:20 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:20 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:20 HTTP request sent, awaiting response... 200 OK
00:45:20 Length: 66309 (65K) [application/java-archive]
00:45:20 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’
00:45:20
00:45:20 0K .......... .......... .......... .......... .......... 77% 15.6M 0s
00:45:20 50K .......... .... 100% 9.21M=0.005s
00:45:20
00:45:20 2026-04-04 00:45:20 (13.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’ saved [66309/66309]
00:45:20
00:45:20 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:45:20 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:20 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:20 --2026-04-04 00:45:20-- https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:45:20 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:20 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:20 HTTP request sent, awaiting response... 200 OK
00:45:21 Length: 33040 (32K) [application/java-archive]
00:45:21 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’
00:45:21
00:45:21 0K .......... .......... .......... .. 100% 15.2M=0.002s
00:45:21
00:45:21 2026-04-04 00:45:21 (15.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’ saved [33040/33040]
00:45:21
00:45:21 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
00:45:21 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:21 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:21 --2026-04-04 00:45:21-- https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
00:45:21 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:21 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:21 HTTP request sent, awaiting response... 200 OK
00:45:21 Length: 77013 (75K) [application/java-archive]
00:45:21 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’
00:45:21
00:45:21 0K .......... .......... .......... .......... .......... 66% 13.9M 0s
00:45:21 50K .......... .......... ..... 100% 1.62M=0.02s
00:45:21
00:45:21 2026-04-04 00:45:21 (3.92 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’ saved [77013/77013]
00:45:21
00:45:21 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
00:45:21 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:21 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:21 --2026-04-04 00:45:21-- https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
00:45:21 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:21 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:21 HTTP request sent, awaiting response... 200 OK
00:45:21 Length: 16323 (16K) [application/java-archive]
00:45:21 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’
00:45:21
00:45:21 0K .......... ..... 100% 36.8M=0s
00:45:21
00:45:21 2026-04-04 00:45:21 (36.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’ saved [16323/16323]
00:45:21
00:45:21 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
00:45:21 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:21 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:21 --2026-04-04 00:45:21-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
00:45:21 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:21 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:21 HTTP request sent, awaiting response... 200 OK
00:45:21 Length: 69370 (68K) [application/java-archive]
00:45:21 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’
00:45:21
00:45:21 0K .......... .......... .......... .......... .......... 73% 24.3M 0s
00:45:21 50K .......... ....... 100% 9.99M=0.004s
00:45:21
00:45:21 2026-04-04 00:45:21 (17.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’ saved [69370/69370]
00:45:21
00:45:21 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
00:45:21 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:21 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:21 --2026-04-04 00:45:21-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
00:45:21 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:21 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:22 HTTP request sent, awaiting response... 200 OK
00:45:22 Length: 102272 (100K) [application/java-archive]
00:45:22 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’
00:45:22
00:45:22 0K .......... .......... .......... .......... .......... 50% 13.2M 0s
00:45:22 50K .......... .......... .......... .......... ......... 100% 2.76M=0.02s
00:45:22
00:45:22 2026-04-04 00:45:22 (4.56 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’ saved [102272/102272]
00:45:22
00:45:22 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
00:45:22 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:22 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:22 --2026-04-04 00:45:22-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
00:45:22 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:22 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:22 HTTP request sent, awaiting response... 200 OK
00:45:22 Length: 69585 (68K) [application/java-archive]
00:45:22 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’
00:45:22
00:45:22 0K .......... .......... .......... .......... .......... 73% 17.2M 0s
00:45:22 50K .......... ....... 100% 10.5M=0.005s
00:45:22
00:45:22 2026-04-04 00:45:22 (14.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’ saved [69585/69585]
00:45:22
00:45:22 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
00:45:22 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:22 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:22 --2026-04-04 00:45:22-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
00:45:22 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:22 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:22 HTTP request sent, awaiting response... 200 OK
00:45:22 Length: 8044 (7.9K) [application/java-archive]
00:45:22 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’
00:45:22
00:45:22 0K ....... 100% 6.75M=0.001s
00:45:22
00:45:22 2026-04-04 00:45:22 (6.75 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’ saved [8044/8044]
00:45:22
00:45:22 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
00:45:22 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:22 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:22 --2026-04-04 00:45:22-- https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
00:45:22 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:22 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:22 HTTP request sent, awaiting response... 200 OK
00:45:23 Length: 17774 (17K) [application/java-archive]
00:45:23 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’
00:45:23
00:45:23 0K .......... ....... 100% 40.4M=0s
00:45:23
00:45:23 2026-04-04 00:45:23 (40.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’ saved [17774/17774]
00:45:23
00:45:23 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
00:45:23 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:23 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:23 --2026-04-04 00:45:23-- https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
00:45:23 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:23 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:23 HTTP request sent, awaiting response... 200 OK
00:45:23 Length: 13168 (13K) [application/java-archive]
00:45:23 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’
00:45:23
00:45:23 0K .......... .. 100% 31.5M=0s
00:45:23
00:45:23 2026-04-04 00:45:23 (31.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’ saved [13168/13168]
00:45:23
00:45:23 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
00:45:23 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:23 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:23 --2026-04-04 00:45:23-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
00:45:23 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:23 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:23 HTTP request sent, awaiting response... 200 OK
00:45:23 Length: 17475 (17K) [application/java-archive]
00:45:23 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’
00:45:23
00:45:23 0K .......... ....... 100% 37.7M=0s
00:45:23
00:45:23 2026-04-04 00:45:23 (37.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’ saved [17475/17475]
00:45:23
00:45:23 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
00:45:23 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:23 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:23 --2026-04-04 00:45:23-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
00:45:23 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:23 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:23 HTTP request sent, awaiting response... 200 OK
00:45:23 Length: 168314 (164K) [application/java-archive]
00:45:23 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’
00:45:23
00:45:23 0K .......... .......... .......... .......... .......... 30% 15.6M 0s
00:45:23 50K .......... .......... .......... .......... .......... 60% 3.24M 0s
00:45:23 100K .......... .......... .......... .......... .......... 91% 3.36M 0s
00:45:23 150K .......... .... 100% 42.2M=0.03s
00:45:23
00:45:23 2026-04-04 00:45:23 (4.86 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’ saved [168314/168314]
00:45:23
00:45:23 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
00:45:23 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:23 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:23 --2026-04-04 00:45:23-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
00:45:23 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:24 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:24 HTTP request sent, awaiting response... 200 OK
00:45:24 Length: 8705 (8.5K) [application/java-archive]
00:45:24 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’
00:45:24
00:45:24 0K ........ 100% 39.4M=0s
00:45:24
00:45:24 2026-04-04 00:45:24 (39.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’ saved [8705/8705]
00:45:24
00:45:24 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
00:45:24 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:24 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:24 --2026-04-04 00:45:24-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
00:45:24 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:24 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:24 HTTP request sent, awaiting response... 200 OK
00:45:24 Length: 45762 (45K) [application/java-archive]
00:45:24 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’
00:45:24
00:45:24 0K .......... .......... .......... .......... .... 100% 14.3M=0.003s
00:45:24
00:45:24 2026-04-04 00:45:24 (14.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’ saved [45762/45762]
00:45:24
00:45:24 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
00:45:24 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:24 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:24 --2026-04-04 00:45:24-- https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
00:45:24 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:24 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:24 HTTP request sent, awaiting response... 200 OK
00:45:24 Length: 33225 (32K) [application/java-archive]
00:45:24 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’
00:45:24
00:45:24 0K .......... .......... .......... .. 100% 17.0M=0.002s
00:45:24
00:45:24 2026-04-04 00:45:24 (17.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’ saved [33225/33225]
00:45:24
00:45:24 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
00:45:24 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:24 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:24 --2026-04-04 00:45:24-- https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
00:45:24 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:24 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:24 HTTP request sent, awaiting response... 200 OK
00:45:24 Length: 27262 (27K) [application/java-archive]
00:45:24 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’
00:45:24
00:45:24 0K .......... .......... ...... 100% 19.2M=0.001s
00:45:24
00:45:24 2026-04-04 00:45:24 (19.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’ saved [27262/27262]
00:45:24
00:45:24 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
00:45:24 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:24 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:24 --2026-04-04 00:45:24-- https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
00:45:25 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:25 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:25 HTTP request sent, awaiting response... 200 OK
00:45:25 Length: 292688 (286K) [application/java-archive]
00:45:25 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’
00:45:25
00:45:25 0K .......... .......... .......... .......... .......... 17% 15.5M 0s
00:45:25 50K .......... .......... .......... .......... .......... 34% 3.18M 0s
00:45:25 100K .......... .......... .......... .......... .......... 52% 3.59M 0s
00:45:25 150K .......... .......... .......... .......... .......... 69% 15.6M 0s
00:45:25 200K .......... .......... .......... .......... .......... 87% 13.2M 0s
00:45:25 250K .......... .......... .......... ..... 100% 17.5M=0.04s
00:45:25
00:45:25 2026-04-04 00:45:25 (6.82 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’ saved [292688/292688]
00:45:25
00:45:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
00:45:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:25 --2026-04-04 00:45:25-- https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
00:45:25 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:25 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:25 HTTP request sent, awaiting response... 200 OK
00:45:25 Length: 50524 (49K) [application/java-archive]
00:45:25 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’
00:45:25
00:45:25 0K .......... .......... .......... .......... ......... 100% 13.5M=0.004s
00:45:25
00:45:25 2026-04-04 00:45:25 (13.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’ saved [50524/50524]
00:45:25
00:45:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
00:45:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:25 --2026-04-04 00:45:25-- https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
00:45:25 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:45:25 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:25 HTTP request sent, awaiting response... 200 OK
00:45:25 Length: 44371 (43K) [application/java-archive]
00:45:25 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’
00:45:25
00:45:25 0K .......... .......... .......... .......... ... 100% 17.0M=0.002s
00:45:25
00:45:25 2026-04-04 00:45:25 (17.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’ saved [44371/44371]
00:45:25
00:45:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
00:45:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:25 --2026-04-04 00:45:25-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
00:45:25 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:25 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:26 HTTP request sent, awaiting response... 200 OK
00:45:26 Length: 31487 (31K) [application/java-archive]
00:45:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’
00:45:26
00:45:26 0K .......... .......... .......... 100% 20.8M=0.001s
00:45:26
00:45:26 2026-04-04 00:45:26 (20.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’ saved [31487/31487]
00:45:26
00:45:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
00:45:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:26 --2026-04-04 00:45:26-- https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
00:45:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:45:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:26 HTTP request sent, awaiting response... 200 OK
00:45:26 Length: 535001 (522K) [application/java-archive]
00:45:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’
00:45:26
00:45:26 0K .......... .......... .......... .......... .......... 9% 14.6M 0s
00:45:26 50K .......... .......... .......... .......... .......... 19% 3.18M 0s
00:45:26 100K .......... .......... .......... .......... .......... 28% 3.59M 0s
00:45:26 150K .......... .......... .......... .......... .......... 38% 15.3M 0s
00:45:26 200K .......... .......... .......... .......... .......... 47% 12.8M 0s
00:45:26 250K .......... .......... .......... .......... .......... 57% 13.2M 0s
00:45:26 300K .......... .......... .......... .......... .......... 66% 12.7M 0s
00:45:26 350K .......... .......... .......... .......... .......... 76% 15.6M 0s
00:45:26 400K .......... .......... .......... .......... .......... 86% 23.8M 0s
00:45:26 450K .......... .......... .......... .......... .......... 95% 13.7M 0s
00:45:26 500K .......... .......... .. 100% 30.0M=0.06s
00:45:26
00:45:26 2026-04-04 00:45:26 (9.06 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’ saved [535001/535001]
00:45:26
00:45:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
00:45:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:26 --2026-04-04 00:45:26-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
00:45:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:45:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:45:26 HTTP request sent, awaiting response... 200 OK
00:45:26 Length: 8798 (8.6K) [application/java-archive]
00:45:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’
00:45:26
00:45:26 0K ........ 100% 40.5M=0s
00:45:26
00:45:26 2026-04-04 00:45:26 (40.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’ saved [8798/8798]
00:45:26
00:45:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
00:45:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:26 --2026-04-04 00:45:26-- https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
00:45:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:45:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:45:26 HTTP request sent, awaiting response... 200 OK
00:45:27 Length: 11640 (11K) [application/java-archive]
00:45:27 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’
00:45:27
00:45:27 0K .......... . 100% 35.7M=0s
00:45:27
00:45:27 2026-04-04 00:45:27 (35.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’ saved [11640/11640]
00:45:27
00:45:27 + for x in *.jar
00:45:27 + mv omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server
00:45:27 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:45:27 ++ deactivate nondestructive
00:45:27 ++ '[' -n '' ']'
00:45:27 ++ '[' -n '' ']'
00:45:27 ++ hash -r
00:45:27 ++ '[' -n '' ']'
00:45:27 ++ unset VIRTUAL_ENV
00:45:27 ++ unset VIRTUAL_ENV_PROMPT
00:45:27 ++ '[' '!' nondestructive = nondestructive ']'
00:45:27 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:45:27 ++ export VIRTUAL_ENV
00:45:27 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:45:27 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:45:27 ++ export PATH
00:45:27 ++ '[' -n '' ']'
00:45:27 ++ '[' -z '' ']'
00:45:27 ++ _OLD_VIRTUAL_PS1=
00:45:27 ++ PS1='(.venv3) '
00:45:27 ++ export PS1
00:45:27 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:45:27 ++ export VIRTUAL_ENV_PROMPT
00:45:27 ++ hash -r
00:45:27 + pip install -U pip
00:45:27 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
00:45:27 Collecting pip
00:45:27 Using cached pip-26.0.1-py3-none-any.whl (1.8 MB)
00:45:27 Installing collected packages: pip
00:45:27 Attempting uninstall: pip
00:45:27 Found existing installation: pip 22.3.1
00:45:27 Uninstalling pip-22.3.1:
00:45:27 Successfully uninstalled pip-22.3.1
00:45:28 Successfully installed pip-26.0.1
00:45:28 WARNING: There was an error checking the latest version of pip.
00:45:28 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:45:28 Collecting zeroc-ice==3.6.5
00:45:29 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:45:31 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 14.6 MB/s 0:00:02
00:45:31 Installing collected packages: zeroc-ice
00:45:32 Successfully installed zeroc-ice-3.6.5
00:45:32 + pip install markdown
00:45:33 Collecting markdown
00:45:33 Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
00:45:33 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
00:45:33 Installing collected packages: markdown
00:45:33 Successfully installed markdown-3.10.2
00:45:33 + pip install reportlab
00:45:33 Collecting reportlab
00:45:33 Using cached reportlab-4.4.10-py3-none-any.whl.metadata (1.7 kB)
00:45:34 Collecting pillow>=9.0.0 (from reportlab)
00:45:34 Using cached pillow-12.2.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
00:45:34 Collecting charset-normalizer (from reportlab)
00:45:34 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB)
00:45:34 Using cached reportlab-4.4.10-py3-none-any.whl (2.0 MB)
00:45:34 Using cached pillow-12.2.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.1 MB)
00:45:34 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB)
00:45:34 Installing collected packages: pillow, charset-normalizer, reportlab
00:45:35
00:45:35 Successfully installed charset-normalizer-3.4.7 pillow-12.2.0 reportlab-4.4.10
00:45:35 + pip install omego
00:45:35 Collecting omego
00:45:35 Using cached omego-0.8.0-py3-none-any.whl.metadata (1.9 kB)
00:45:35 Collecting future (from omego)
00:45:35 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:45:35 Collecting yaclifw>=0.1.1 (from omego)
00:45:35 Using cached yaclifw-0.2.0-py3-none-any.whl
00:45:35 Collecting six (from yaclifw>=0.1.1->omego)
00:45:35 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
00:45:35 Using cached omego-0.8.0-py3-none-any.whl (41 kB)
00:45:35 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:45:35 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
00:45:35 Installing collected packages: six, future, yaclifw, omego
00:45:36
00:45:36 Successfully installed future-1.0.0 omego-0.8.0 six-1.17.0 yaclifw-0.2.0
00:45:36 + pip install tables
00:45:36 Collecting tables
00:45:36 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
00:45:36 Collecting numpy>=1.20.0 (from tables)
00:45:36 Using cached numpy-2.4.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
00:45:37 Collecting numexpr>=2.6.2 (from tables)
00:45:37 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
00:45:37 Collecting packaging (from tables)
00:45:37 Using cached packaging-26.0-py3-none-any.whl.metadata (3.3 kB)
00:45:37 Collecting py-cpuinfo (from tables)
00:45:37 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
00:45:37 Collecting blosc2>=2.3.0 (from tables)
00:45:37 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (6.2 kB)
00:45:37 Collecting ndindex (from blosc2>=2.3.0->tables)
00:45:37 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
00:45:37 Collecting msgpack (from blosc2>=2.3.0->tables)
00:45:37 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:45:37 Collecting requests (from blosc2>=2.3.0->tables)
00:45:37 Using cached requests-2.33.1-py3-none-any.whl.metadata (4.8 kB)
00:45:37 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.7)
00:45:37 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
00:45:37 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
00:45:37 Collecting urllib3<3,>=1.26 (from requests->blosc2>=2.3.0->tables)
00:45:37 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
00:45:37 Collecting certifi>=2023.5.7 (from requests->blosc2>=2.3.0->tables)
00:45:37 Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB)
00:45:37 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
00:45:37 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (5.2 MB)
00:45:37 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
00:45:37 Using cached numpy-2.4.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
00:45:37 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
00:45:37 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
00:45:37 Using cached packaging-26.0-py3-none-any.whl (74 kB)
00:45:37 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
00:45:37 Using cached requests-2.33.1-py3-none-any.whl (64 kB)
00:45:37 Using cached idna-3.11-py3-none-any.whl (71 kB)
00:45:37 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
00:45:37 Using cached certifi-2026.2.25-py3-none-any.whl (153 kB)
00:45:37 Installing collected packages: py-cpuinfo, urllib3, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables
00:45:41
00:45:41 Successfully installed blosc2-4.1.2 certifi-2026.2.25 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.4 packaging-26.0 py-cpuinfo-9.0.0 requests-2.33.1 tables-3.11.1 urllib3-2.6.3
00:45:41 + pip install jinja2
00:45:41 Collecting jinja2
00:45:41 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
00:45:41 Collecting MarkupSafe>=2.0 (from jinja2)
00:45:41 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
00:45:41 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
00:45:41 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
00:45:41 Installing collected packages: MarkupSafe, jinja2
00:45:41
00:45:41 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
00:45:41 + pip install omero-py
00:45:42 Collecting omero-py
00:45:42 Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
00:45:42 Collecting appdirs (from omero-py)
00:45:42 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:45:42 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
00:45:42 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.4)
00:45:42 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.2.0)
00:45:42 Collecting PyYAML (from omero-py)
00:45:42 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
00:45:42 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
00:45:42 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.33.1)
00:45:42 Collecting portalocker (from omero-py)
00:45:42 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:45:42 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.7)
00:45:42 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
00:45:42 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
00:45:42 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.2.25)
00:45:42 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
00:45:42 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:45:42 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:45:42 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
00:45:42 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
00:45:44
00:45:44 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.22.1 portalocker-3.2.0
00:45:44 + pip install pyarrow
00:45:44 Collecting pyarrow
00:45:44 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.1 kB)
00:45:44 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl (47.6 MB)
00:45:44 Installing collected packages: pyarrow
00:45:46 Successfully installed pyarrow-23.0.1
00:45:46 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
00:45:46 Collecting omero-metadata
00:45:46 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-u_oe08wl/omero-metadata_791714f5aac94609a246f82f276a4850
00:45:46 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-u_oe08wl/omero-metadata_791714f5aac94609a246f82f276a4850
00:45:47 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 1dd2700d4f1206b18f960a9ba09d7c4de8a349bb
00:45:47 Installing build dependencies: started
00:45:48 Installing build dependencies: finished with status 'done'
00:45:48 Getting requirements to build wheel: started
00:45:49 Getting requirements to build wheel: finished with status 'done'
00:45:49 Preparing metadata (pyproject.toml): started
00:45:49 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:49 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.22.1)
00:45:49 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
00:45:49 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
00:45:49 Collecting pandas (from omero-metadata)
00:45:49 Using cached pandas-3.0.2-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:45:49 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
00:45:49 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
00:45:49 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.4)
00:45:49 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.2.0)
00:45:49 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
00:45:49 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.33.1)
00:45:49 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
00:45:49 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
00:45:49 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
00:45:49 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
00:45:49 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
00:45:49 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.7)
00:45:49 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
00:45:49 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.3)
00:45:49 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.2.25)
00:45:49 Using cached pandas-3.0.2-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.3 MB)
00:45:49 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
00:45:49 Building wheels for collected packages: omero-metadata
00:45:49 Building wheel for omero-metadata (pyproject.toml): started
00:45:50 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
00:45:50 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39373 sha256=1aa4f452fba25e2292f0bdb005e8d0666e4b4889b1ae3c21ab1f78a81c717d38
00:45:50 Stored in directory: /tmp/pip-ephem-wheel-cache-mozdshx_/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
00:45:50 Successfully built omero-metadata
00:45:50 Installing collected packages: python-dateutil, pandas, omero-metadata
00:45:54
00:45:54 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.2 python-dateutil-2.9.0.post0
00:45:54 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
00:45:54 Collecting omero-cli-render
00:45:54 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-crxtq5_u/omero-cli-render_4ad8ad56e3c248a3907eabef4e6858b5
00:45:54 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-crxtq5_u/omero-cli-render_4ad8ad56e3c248a3907eabef4e6858b5
00:45:55 Running command git checkout -b merge_ci --track origin/merge_ci
00:45:56 Switched to a new branch 'merge_ci'
00:45:56 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:45:56 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 58fa917567d0ae6829cf9b1f048ded64a2c7ffb0
00:45:56 Installing build dependencies: started
00:45:56 Installing build dependencies: finished with status 'done'
00:45:56 Getting requirements to build wheel: started
00:45:57 Getting requirements to build wheel: finished with status 'done'
00:45:57 Preparing metadata (pyproject.toml): started
00:45:57 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:57 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
00:45:57 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.22.1)
00:45:57 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
00:45:57 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
00:45:57 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.4)
00:45:57 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.2.0)
00:45:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
00:45:57 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.33.1)
00:45:57 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
00:45:57 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.7)
00:45:57 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
00:45:57 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.3)
00:45:57 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.2.25)
00:45:57 Building wheels for collected packages: omero-cli-render
00:45:57 Building wheel for omero-cli-render (pyproject.toml): started
00:45:57 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
00:45:57 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19839 sha256=537865c4cae0912447c062f21b1849cecaf83018209a5a01ad98b2008df323ce
00:45:57 Stored in directory: /tmp/pip-ephem-wheel-cache-33o286cb/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
00:45:57 Successfully built omero-cli-render
00:45:57 Installing collected packages: omero-cli-render
00:45:57 Successfully installed omero-cli-render-0.8.2.dev0
00:45:57 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
00:45:58 Collecting omero-cli-duplicate
00:45:58 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-_y_pdab8/omero-cli-duplicate_cf21b5e115f845efaf6b09de145fd2b6
00:45:58 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-_y_pdab8/omero-cli-duplicate_cf21b5e115f845efaf6b09de145fd2b6
00:45:59 Running command git checkout -b merge_ci --track origin/merge_ci
00:45:59 Switched to a new branch 'merge_ci'
00:45:59 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:45:59 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit fc617c29045331fad9548c3d769ce0d6faeaac72
00:45:59 Installing build dependencies: started
00:46:00 Installing build dependencies: finished with status 'done'
00:46:00 Getting requirements to build wheel: started
00:46:00 Getting requirements to build wheel: finished with status 'done'
00:46:00 Preparing metadata (pyproject.toml): started
00:46:00 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:00 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.1)
00:46:00 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
00:46:00 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
00:46:00 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.4)
00:46:00 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.2.0)
00:46:00 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
00:46:00 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
00:46:00 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.33.1)
00:46:00 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
00:46:00 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.7)
00:46:00 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
00:46:00 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
00:46:00 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.2.25)
00:46:00 Building wheels for collected packages: omero-cli-duplicate
00:46:00 Building wheel for omero-cli-duplicate (pyproject.toml): started
00:46:01 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
00:46:01 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11539 sha256=2c6718f52fedeb8705eddd8ebd0efc04abcc33b60e7849c4ea8a4e070093f08a
00:46:01 Stored in directory: /tmp/pip-ephem-wheel-cache-rde7myhj/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
00:46:01 Successfully built omero-cli-duplicate
00:46:01 Installing collected packages: omero-cli-duplicate
00:46:01 Successfully installed omero-cli-duplicate-0.4.1.dev0
00:46:01 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
00:46:01 Collecting omero-cli-zarr
00:46:01 Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-qcf_1ebb/omero-cli-zarr_bb59e066d0934575ac5f259010c878ba
00:46:01 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-qcf_1ebb/omero-cli-zarr_bb59e066d0934575ac5f259010c878ba
00:46:02 Running command git checkout -b merge_ci --track origin/merge_ci
00:46:02 Switched to a new branch 'merge_ci'
00:46:02 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:46:02 Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit f4ea10973c766d8996df2bcde39937613cfefaee
00:46:02 Installing build dependencies: started
00:46:03 Installing build dependencies: finished with status 'done'
00:46:03 Getting requirements to build wheel: started
00:46:03 Getting requirements to build wheel: finished with status 'done'
00:46:03 Installing backend dependencies: started
00:46:04 Installing backend dependencies: finished with status 'done'
00:46:04 Preparing metadata (pyproject.toml): started
00:46:05 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:05 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.22.1)
00:46:05 Collecting ome-zarr>=0.13.0 (from omero-cli-zarr)
00:46:05 Using cached ome_zarr-0.14.0-py3-none-any.whl.metadata (2.9 kB)
00:46:05 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.4.4)
00:46:05 Collecting dask<=2026.1.1,>=2025.12.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:05 Using cached dask-2026.1.1-py3-none-any.whl.metadata (3.8 kB)
00:46:05 Collecting zarr>=3.0.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:05 Using cached zarr-3.1.6-py3-none-any.whl.metadata (8.6 kB)
00:46:05 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:05 Using cached fsspec-2026.3.0-py3-none-any.whl.metadata (10 kB)
00:46:05 Collecting aiohttp (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:05 Using cached aiohttp-3.13.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:46:05 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.33.1)
00:46:08 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
00:46:08 Collecting toolz (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
00:46:08 Collecting rangehttpserver (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
00:46:08 Collecting Deprecated (from ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Using cached deprecated-1.3.1-py2.py3-none-any.whl.metadata (5.9 kB)
00:46:08 Collecting click>=8.1 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Downloading click-8.3.2-py3-none-any.whl.metadata (2.6 kB)
00:46:08 Collecting cloudpickle>=3.0.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:08 Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
00:46:08 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (26.0)
00:46:09 Collecting partd>=1.4.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
00:46:09 Requirement already satisfied: pyyaml>=5.3.1 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (6.0.3)
00:46:09 Collecting importlib_metadata>=4.13.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached importlib_metadata-9.0.0-py3-none-any.whl.metadata (4.5 kB)
00:46:09 Collecting s3fs>2024.2.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached s3fs-2026.3.0-py3-none-any.whl.metadata (1.2 kB)
00:46:09 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
00:46:09 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
00:46:09 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
00:46:09 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.2.0)
00:46:09 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
00:46:09 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
00:46:09 Collecting locket (from partd>=1.4.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
00:46:09 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached aiobotocore-3.3.0-py3-none-any.whl.metadata (26 kB)
00:46:09 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:09 Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
00:46:10 Collecting botocore<1.42.71,>=1.42.62 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached botocore-1.42.70-py3-none-any.whl.metadata (5.9 kB)
00:46:10 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.9.0.post0)
00:46:10 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
00:46:10 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
00:46:10 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
00:46:10 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
00:46:10 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
00:46:10 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached attrs-26.1.0-py3-none-any.whl.metadata (8.8 kB)
00:46:10 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:10 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
00:46:11 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
00:46:11 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:46:11 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.42.71,>=1.42.62->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.6.3)
00:46:11 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (1.17.0)
00:46:11 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr) (3.11)
00:46:11 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
00:46:11 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
00:46:11 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
00:46:11 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached imageio-2.37.3-py3-none-any.whl.metadata (9.7 kB)
00:46:11 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached tifffile-2026.3.3-py3-none-any.whl.metadata (31 kB)
00:46:11 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached lazy_loader-0.5-py3-none-any.whl.metadata (5.9 kB)
00:46:11 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
00:46:11 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
00:46:11 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:46:11 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
00:46:11 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (3.4.7)
00:46:11 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (2026.2.25)
00:46:11 Using cached ome_zarr-0.14.0-py3-none-any.whl (45 kB)
00:46:11 Using cached dask-2026.1.1-py3-none-any.whl (1.5 MB)
00:46:11 Downloading click-8.3.2-py3-none-any.whl (108 kB)
00:46:11 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
00:46:11 Using cached fsspec-2026.3.0-py3-none-any.whl (202 kB)
00:46:11 Using cached importlib_metadata-9.0.0-py3-none-any.whl (27 kB)
00:46:11 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
00:46:11 Using cached s3fs-2026.3.0-py3-none-any.whl (32 kB)
00:46:11 Using cached aiobotocore-3.3.0-py3-none-any.whl (87 kB)
00:46:11 Using cached aiohttp-3.13.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.8 MB)
00:46:11 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
00:46:11 Using cached botocore-1.42.70-py3-none-any.whl (14.7 MB)
00:46:12 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
00:46:12 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
00:46:12 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (114 kB)
00:46:12 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (102 kB)
00:46:12 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
00:46:12 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
00:46:12 Using cached attrs-26.1.0-py3-none-any.whl (67 kB)
00:46:12 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
00:46:12 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
00:46:12 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
00:46:12 Using cached imageio-2.37.3-py3-none-any.whl (317 kB)
00:46:12 Using cached lazy_loader-0.5-py3-none-any.whl (8.0 kB)
00:46:12 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
00:46:12 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.3 MB)
00:46:12 Using cached tifffile-2026.3.3-py3-none-any.whl (243 kB)
00:46:12 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
00:46:12 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
00:46:12 Using cached zarr-3.1.6-py3-none-any.whl (295 kB)
00:46:12 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
00:46:12 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
00:46:12 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
00:46:12 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
00:46:12 Using cached deprecated-1.3.1-py2.py3-none-any.whl (11 kB)
00:46:12 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
00:46:12 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
00:46:12 Building wheels for collected packages: omero-cli-zarr
00:46:12 Building wheel for omero-cli-zarr (pyproject.toml): started
00:46:12 Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
00:46:12 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev162+gf4ea109-py3-none-any.whl size=38289 sha256=7ee26711dfd42868006a9f5baeddc546ebb69cec7d5d86173d588785255efbcb
00:46:12 Stored in directory: /tmp/pip-ephem-wheel-cache-gu8pjnyg/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
00:46:12 Successfully built omero-cli-zarr
00:46:12 Installing collected packages: rangehttpserver, zipp, wrapt, typing-extensions, toolz, tifffile, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, partd, numcodecs, importlib_metadata, Deprecated, botocore, aiosignal, zarr, dask, aiohttp, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
00:46:24
00:46:24 Successfully installed Deprecated-1.3.1 aiobotocore-3.3.0 aiohappyeyeballs-2.6.1 aiohttp-3.13.5 aioitertools-0.13.0 aiosignal-1.4.0 attrs-26.1.0 botocore-1.42.70 click-8.3.2 cloudpickle-3.1.2 dask-2026.1.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.3.0 google-crc32c-1.8.0 imageio-2.37.3 importlib_metadata-9.0.0 jmespath-1.1.0 lazy-loader-0.5 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.14.0 omero-cli-zarr-0.5.5.dev162+gf4ea109 partd-1.4.2 propcache-0.4.1 rangehttpserver-1.4.0 s3fs-2026.3.0 scikit-image-0.26.0 scipy-1.17.1 tifffile-2026.3.3 toolz-1.1.0 typing-extensions-4.15.0 wrapt-2.1.2 yarl-1.23.0 zarr-3.1.6 zipp-3.23.0
00:46:24 + pip install omero-certificates
00:46:24 Collecting omero-certificates
00:46:24 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
00:46:24 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.1)
00:46:24 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
00:46:24 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
00:46:24 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.4)
00:46:24 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.2.0)
00:46:24 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
00:46:24 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
00:46:24 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.33.1)
00:46:24 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
00:46:25 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.7)
00:46:25 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
00:46:25 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
00:46:25 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.2.25)
00:46:25 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
00:46:25 Installing collected packages: omero-certificates
00:46:25 Successfully installed omero-certificates-0.4.0
00:46:25 + for x in *.tar.gz
00:46:25 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:46:25 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:46:25 Installing build dependencies: started
00:46:26 Installing build dependencies: finished with status 'done'
00:46:26 Getting requirements to build wheel: started
00:46:26 Getting requirements to build wheel: finished with status 'done'
00:46:26 Preparing metadata (pyproject.toml): started
00:46:26 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:26 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.22.1)
00:46:26 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:46:26 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:46:26 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.4)
00:46:26 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.2.0)
00:46:26 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
00:46:26 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:46:26 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.33.1)
00:46:26 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
00:46:26 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.7)
00:46:26 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
00:46:26 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
00:46:26 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.2.25)
00:46:26 Building wheels for collected packages: omero-dropbox
00:46:26 Building wheel for omero-dropbox (pyproject.toml): started
00:46:27 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:46:27 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49154 sha256=a646e920191e79746c089119ee0b5d0062505ab21c6e237ee88cd1e758c7b92e
00:46:27 Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
00:46:27 Successfully built omero-dropbox
00:46:27 Installing collected packages: omero-dropbox
00:46:27 Successfully installed omero-dropbox-5.7.1.dev0
00:46:27 + for x in *.tar.gz
00:46:27 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
00:46:27 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:46:27 Installing build dependencies: started
00:46:28 Installing build dependencies: finished with status 'done'
00:46:28 Getting requirements to build wheel: started
00:46:28 Getting requirements to build wheel: finished with status 'done'
00:46:28 Preparing metadata (pyproject.toml): started
00:46:28 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:28 Building wheels for collected packages: omero_marshal
00:46:28 Building wheel for omero_marshal (pyproject.toml): started
00:46:29 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:46:29 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88131 sha256=c558845ab73c813b02a6454cad8a1ddb832deb3f496023b570dc3b65d728a134
00:46:29 Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
00:46:29 Successfully built omero_marshal
00:46:29 Installing collected packages: omero_marshal
00:46:29 Successfully installed omero_marshal-0.9.2.dev0
00:46:29 + for x in *.tar.gz
00:46:29 + pip install -U omero_py-5.22.2.dev0.tar.gz
00:46:29 Processing ./omero_py-5.22.2.dev0.tar.gz
00:46:30 Installing build dependencies: started
00:46:30 Installing build dependencies: finished with status 'done'
00:46:30 Getting requirements to build wheel: started
00:46:31 Getting requirements to build wheel: finished with status 'done'
00:46:31 Preparing metadata (pyproject.toml): started
00:46:31 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:31 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
00:46:31 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
00:46:31 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.4)
00:46:31 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.2.0)
00:46:31 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
00:46:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
00:46:31 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.33.1)
00:46:31 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
00:46:31 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.7)
00:46:31 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.11)
00:46:31 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.6.3)
00:46:31 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.2.25)
00:46:31 Building wheels for collected packages: omero-py
00:46:31 Building wheel for omero-py (pyproject.toml): started
00:46:32 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:46:32 Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2786692 sha256=3ce95f173c238a5fd13112ecc5d8756f0c289d9a2e613e3cb330392c703277c1
00:46:32 Stored in directory: /home/omero/.cache/pip/wheels/ec/3f/72/4027ca0a7faf1f66d4577cc07619b0497ac8e99396d43dd8fa
00:46:32 Successfully built omero-py
00:46:32 Installing collected packages: omero-py
00:46:32 Attempting uninstall: omero-py
00:46:32 Found existing installation: omero-py 5.22.1
00:46:32 Uninstalling omero-py-5.22.1:
00:46:33 Successfully uninstalled omero-py-5.22.1
00:46:34 Successfully installed omero-py-5.22.2.dev0
00:46:35 + for x in *.tar.gz
00:46:35 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
00:46:35 Processing ./omero_scripts-5.10.1.dev0.tar.gz
00:46:35 Installing build dependencies: started
00:46:36 Installing build dependencies: finished with status 'done'
00:46:36 Getting requirements to build wheel: started
00:46:36 Getting requirements to build wheel: finished with status 'done'
00:46:36 Preparing metadata (pyproject.toml): started
00:46:36 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:36 Building wheels for collected packages: omero-scripts
00:46:36 Building wheel for omero-scripts (pyproject.toml): started
00:46:36 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:46:36 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137001 sha256=e621bdf4fc9541af0e4f32bbedea32497613df4fdb3c790b03d616f0bb29a1c2
00:46:36 Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
00:46:36 Successfully built omero-scripts
00:46:37 Installing collected packages: omero-scripts
00:46:37 Successfully installed omero-scripts-5.10.1.dev0
00:46:37 + for x in *.tar.gz
00:46:37 + pip install -U omero_web-5.31.1.dev0.tar.gz
00:46:37 Processing ./omero_web-5.31.1.dev0.tar.gz
00:46:37 Installing build dependencies: started
00:46:38 Installing build dependencies: finished with status 'done'
00:46:38 Getting requirements to build wheel: started
00:46:38 Getting requirements to build wheel: finished with status 'done'
00:46:38 Preparing metadata (pyproject.toml): started
00:46:39 Preparing metadata (pyproject.toml): finished with status 'done'
00:46:39 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (5.22.2.dev0)
00:46:39 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.31.1.dev0)
00:46:39 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
00:46:39 Collecting Django<5.3,>=5.2.9 (from omero-web==5.31.1.dev0)
00:46:39 Using cached django-5.2.12-py3-none-any.whl.metadata (4.1 kB)
00:46:39 Collecting django-pipeline>=4.1.0 (from omero-web==5.31.1.dev0)
00:46:39 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
00:46:39 Collecting django-cors-headers==3.7.0 (from omero-web==5.31.1.dev0)
00:46:39 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:46:39 Collecting whitenoise>=5.3.0 (from omero-web==5.31.1.dev0)
00:46:39 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
00:46:39 Collecting gunicorn>=19.3 (from omero-web==5.31.1.dev0)
00:46:39 Using cached gunicorn-25.3.0-py3-none-any.whl.metadata (5.5 kB)
00:46:39 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (0.9.2.dev0)
00:46:39 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (12.2.0)
00:46:39 Collecting pytz (from omero-web==5.31.1.dev0)
00:46:39 Using cached pytz-2026.1.post1-py2.py3-none-any.whl.metadata (22 kB)
00:46:39 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (3.2.0)
00:46:39 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (26.0)
00:46:39 Collecting importlib-resources (from omero-web==5.31.1.dev0)
00:46:39 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:46:39 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
00:46:39 Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
00:46:39 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
00:46:39 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
00:46:39 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0) (65.5.1)
00:46:39 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0)
00:46:39 Using cached wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)
00:46:39 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.4.4)
00:46:39 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.0.0)
00:46:39 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.4.4)
00:46:39 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (6.0.3)
00:46:39 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.6.5)
00:46:39 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.33.1)
00:46:39 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.4.7)
00:46:39 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.11)
00:46:39 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.6.3)
00:46:39 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2026.2.25)
00:46:39 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:46:39 Using cached django-5.2.12-py3-none-any.whl (8.3 MB)
00:46:39 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
00:46:39 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
00:46:39 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
00:46:39 Using cached gunicorn-25.3.0-py3-none-any.whl (208 kB)
00:46:39 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
00:46:39 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
00:46:39 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:46:39 Using cached pytz-2026.1.post1-py2.py3-none-any.whl (510 kB)
00:46:39 Using cached wheel-0.46.3-py3-none-any.whl (30 kB)
00:46:39 Building wheels for collected packages: omero-web
00:46:39 Building wheel for omero-web (pyproject.toml): started
00:46:41 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:46:41 Created wheel for omero-web: filename=omero_web-5.31.1.dev0-py3-none-any.whl size=2819315 sha256=2d20ddbbcd9a6b43875555c9bcd9e215fbc647676885d76b4685ab5ee70720ab
00:46:41 Stored in directory: /home/omero/.cache/pip/wheels/48/a3/5b/968853abf49b64e1726fdb37874d77f08ddad2d06b53de06b3
00:46:41 Successfully built omero-web
00:46:41 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
00:46:45
00:46:45 Successfully installed Django-5.2.12 asgiref-3.11.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-25.3.0 importlib-resources-6.5.2 omero-web-5.31.1.dev0 pytz-2026.1.post1 sqlparse-0.5.5 wheel-0.46.3 whitenoise-6.12.0
00:46:45 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:46:45 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:46:45 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:46:45 --2026-04-04 00:46:45-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:46:45 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.109.133, 185.199.111.133, 185.199.110.133, ...
00:46:45 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.109.133|:443... connected.
00:46:45 HTTP request sent, awaiting response... 200 OK
00:46:45 Length: 139338 (136K) [text/plain]
00:46:45 Saving to: ‘Figure_To_Pdf.py’
00:46:45
00:46:45 0K .......... .......... .......... .......... .......... 36% 2.64M 0s
00:46:45 50K .......... .......... .......... .......... .......... 73% 9.42M 0s
00:46:45 100K .......... .......... .......... ...... 100% 4.23M=0.03s
00:46:45
00:46:45 2026-04-04 00:46:45 (4.15 MB/s) - ‘Figure_To_Pdf.py’ saved [139338/139338]
00:46:45
00:46:45 + chmod 755 Figure_To_Pdf.py
00:46:45 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
00:46:45 + omero config set omero.db.name OMERO-server
00:46:47 + omero config set omero.db.host pg
00:46:49 + omero config set omero.db.user postgres
00:46:51 + omero config set omero.data.dir /home/omero/omero-server-data
00:46:53 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
00:46:55 + omero config set omero.db.poolsize 25
00:46:57 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
00:47:00 + omero config set omero.security.trustStorePassword changeit
00:47:01 + omero config set omero.mail.config true
00:47:03 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
00:47:06 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
00:47:07 + omero certificates
00:47:09 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
00:47:09 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
00:47:09 + '[' false = true ']'
00:47:09 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
00:47:09 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
00:47:09 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG dbcommand => upgrade
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG dbhost => localhost
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG dbname => OMERO-server
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG dbpass => omero
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG dbuser => omero
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG rootpass => omero
00:47:10 2026-04-04 00:47:10,079 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
00:47:10 2026-04-04 00:47:10,079 [omego.extern] INFO Executing : omero version
00:47:11 OMERO.py version:
00:47:11 OMERO.server version:
00:47:11 5.6.3-594-116d0d2bd7-ice36-b99
00:47:11 5.22.2.dev0
00:47:12 2026-04-04 00:47:12,100 [omego.extern] INFO Completed [2.021 s]
00:47:12 2026-04-04 00:47:12,101 [omego.extern] DEBUG Using omero CLI from omero
00:47:12 2026-04-04 00:47:12,101 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
00:47:12 2026-04-04 00:47:12,101 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:47:12 2026-04-04 00:47:12,101 [omego.extern] INFO Executing : omero config get --show-password
00:47:14 2026-04-04 00:47:14,093 [omego.extern] INFO Completed [1.992 s]
00:47:14 2026-04-04 00:47:14,093 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:47:14 2026-04-04 00:47:14,094 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
00:47:14 2026-04-04 00:47:14,099 [omego.extern] INFO Completed [0.005 s]
00:47:14 2026-04-04 00:47:14,099 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
00:47:14 2026-04-04 00:47:14,099 [ omego.db] INFO psql version: psql (PostgreSQL) 16.11
00:47:14
00:47:14 2026-04-04 00:47:14,099 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:47:14 2026-04-04 00:47:14,099 [omego.extern] INFO Executing : omero config get --show-password
00:47:16 2026-04-04 00:47:16,063 [omego.extern] INFO Completed [1.964 s]
00:47:16 2026-04-04 00:47:16,063 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:47:16 2026-04-04 00:47:16,063 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
00:47:16 2026-04-04 00:47:16,072 [omego.extern] INFO Completed [0.009 s]
00:47:16 2026-04-04 00:47:16,072 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.3") at port "5432".\n'
00:47:16 2026-04-04 00:47:16,072 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:47:16 2026-04-04 00:47:16,073 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:47:16 2026-04-04 00:47:16,073 [omego.extern] INFO Executing : omero config get --show-password
00:47:18 2026-04-04 00:47:18,053 [omego.extern] INFO Completed [1.981 s]
00:47:18 2026-04-04 00:47:18,053 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:47:18 2026-04-04 00:47:18,053 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:47:18 2026-04-04 00:47:18,063 [omego.extern] INFO Completed [0.010 s]
00:47:18 2026-04-04 00:47:18,064 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
00:47:18 2026-04-04 00:47:18,064 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
00:47:18 2026-04-04 00:47:18,066 [ omego.db] INFO Database is already at OMERO5.4__0
00:47:18 + export LANG=en_US.UTF-8
00:47:18 + LANG=en_US.UTF-8
00:47:18 + export LANGUAGE=en_US:en
00:47:18 + LANGUAGE=en_US:en
00:47:18 + export LC_ALL=en_US.UTF-8
00:47:18 + LC_ALL=en_US.UTF-8
00:47:18 + BUILD_ID=DONT_KILL_ME
00:47:18 + omero admin start
00:47:23 No descriptor given. Using etc/grid/default.xml
00:47:31 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
00:47:31 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
00:47:31 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
00:47:31 Waiting on startup. Use CTRL-C to exit
00:47:31 + omero admin waitup
00:47:33 Waiting on startup. Use CTRL-C to exit
00:47:33 + omero admin diagnostics
00:47:35
00:47:35 ================================================================================
00:47:35 OMERO Diagnostics (admin)
00:47:35 ================================================================================
00:47:35
00:47:35 Commands: java -version 17.0.17 (/usr/bin/java)
00:47:35 Commands: python -V 3.11.13 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
00:47:35 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
00:47:35 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
00:47:35 Commands: psql --version 16.11 (/usr/bin/psql)
00:47:35 Commands: openssl version 3.5.11 (/usr/bin/openssl)
00:47:35
00:47:35 Component: OMERO.py 5.22.2.dev0
00:47:35 Component: OMERO.server 5.6.3-594-116d0d2bd7-ice36-b99
00:47:35
00:47:35 Server: icegridnode running
00:47:35 Server: Blitz-0 active (pid = 32601, enabled)
00:47:35 Server: Indexer-0 activating (enabled)
00:47:35 Server: OMERO.Glacier2 active (pid = 32634, enabled)
00:47:35 Server: OMERO.IceStorm active (pid = 32662, enabled)
00:47:35 Server: Processor-0 active (pid = 32651, enabled)
00:47:35 Server: Tables-0 active (pid = 32664, enabled)
00:47:35
00:47:35 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
00:47:35 Log files: Blitz-0.log 33.2 KB errors=0 warnings=1
00:47:35 Log files: DropBox.log n/a
00:47:35 Log files: FileServer.log n/a
00:47:35 Log files: Indexer-0.log 598 B
00:47:35 Log files: MonitorServer.log n/a
00:47:35 Log files: Processor-0.log 735 B
00:47:35 Log files: Tables-0.log 961 B
00:47:35 Log files: TestDropBox.log n/a
00:47:35 Log files: master.err empty
00:47:35 Log files: master.out 30.5 KB
00:47:35 Log files: Total size 0.07 MB
00:47:35
00:47:35
00:47:35 Environment:OMERO_HOME=(unset)
00:47:35 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:47:35 Environment:OMERO_NODE=(unset)
00:47:35 Environment:OMERO_MASTER=(unset)
00:47:35 Environment:OMERO_USERDIR=(unset)
00:47:35 Environment:OMERO_TMPDIR=(unset)
00:47:35 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:35 Environment:PYTHONPATH=(unset)
00:47:35 Environment:ICE_HOME=/opt/ice-3.6.5
00:47:35 Environment:LD_LIBRARY_PATH=(unset)
00:47:35 Environment:DYLD_LIBRARY_PATH=(unset)
00:47:35
00:47:35 OMERO SSL port:4064
00:47:35 OMERO TCP port:4063
00:47:35 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
00:47:35 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
00:47:35
00:47:35 JVM settings: Blitz-${index} -Xmx7200m
00:47:35 JVM settings: Indexer-${index} -Xmx4800m
00:47:35 JVM settings: PixelData-${index} -Xmx7200m
00:47:35 JVM settings: Repository-${index} -Xmx4800m
00:47:35
00:47:35 Jar: lib/server/formats-api.jar Bio-Formats API 8.6.0-SNAPSHOT 4 April 2026 54bc65eaf08cd51ef1f2ea3a4f38c4fdd6efb776
00:47:35 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.6.0-SNAPSHOT 4 April 2026 54bc65eaf08cd51ef1f2ea3a4f38c4fdd6efb776
00:47:35 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.6.0-SNAPSHOT 4 April 2026 54bc65eaf08cd51ef1f2ea3a4f38c4fdd6efb776
00:47:35 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.4-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/ome-common.jar OME Common Java 6.2.2-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/ome-jai.jar OME JAI 0.1.6-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.5-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/ome-poi.jar OME POI 5.3.11-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/ome-xml.jar OME XML library 6.5.4-SNAPSHOT 4 April 2026 02e2294c1687e0ae5e05e853bee7af74657e47d9
00:47:35 Jar: lib/server/omero-blitz.jar jar 5.8.5-SNAPSHOT
00:47:35 Jar: lib/server/omero-common.jar jar 5.7.6-SNAPSHOT
00:47:35 Jar: lib/server/omero-gateway.jar jar 5.10.6-SNAPSHOT
00:47:35 Jar: lib/server/omero-model.jar jar 5.7.6-SNAPSHOT
00:47:35 Jar: lib/server/omero-renderer.jar jar 5.6.5-SNAPSHOT
00:47:35 Jar: lib/server/omero-romio.jar jar 5.8.6-SNAPSHOT
00:47:35 Jar: lib/server/omero-server.jar jar 5.7.5-SNAPSHOT
00:47:35 Jar: lib/server/omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar OMERO Zarr Pixel Buffer 0.6.2-SNAPSHOT f25875b156d29ab63ae8f405ea2feca4363da278
00:47:36 + deactivate
00:47:36 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:47:36 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:47:36 + export PATH
00:47:36 + unset _OLD_VIRTUAL_PATH
00:47:36 + '[' -n '' ']'
00:47:36 + hash -r
00:47:36 + '[' -n '' ']'
00:47:36 + unset VIRTUAL_ENV
00:47:36 + unset VIRTUAL_ENV_PROMPT
00:47:36 + '[' '!' '' = nondestructive ']'
00:47:36 + unset -f deactivate
00:47:36 Finished: SUCCESS
