14:06:30 Started by user devspace
14:06:30 Running as SYSTEM
14:06:30 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
14:06:30 [OMERO-server] $ /bin/bash -xe /tmp/jenkins6675984190190839838.sh
14:06:30 + source /home/settings.env
14:06:30 ++ OMERO_DB_HOST=pg
14:06:30 ++ OMERO_DB_USER=postgres
14:06:30 ++ OMERO_DB_PASS=
14:06:30 ++ OMERO_ROOT_PASS=omero
14:06:30 ++ OMERO_DATA_DIR=/OMERO
14:06:30 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
14:06:30 + OMERO_DB_NAME=OMERO-server
14:06:30 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
14:06:30 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:06:30 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:06:30 + OMERO_DATA_DIR=/home/omero/omero-server-data
14:06:30 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
14:06:30 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
14:06:30 ++ deactivate nondestructive
14:06:30 ++ '[' -n '' ']'
14:06:30 ++ '[' -n '' ']'
14:06:30 ++ hash -r
14:06:30 ++ '[' -n '' ']'
14:06:30 ++ unset VIRTUAL_ENV
14:06:30 ++ unset VIRTUAL_ENV_PROMPT
14:06:30 ++ '[' '!' nondestructive = nondestructive ']'
14:06:30 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
14:06:30 ++ export VIRTUAL_ENV
14:06:30 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:06:30 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:06:30 ++ export PATH
14:06:30 ++ '[' -n '' ']'
14:06:30 ++ '[' -z '' ']'
14:06:30 ++ _OLD_VIRTUAL_PS1=
14:06:30 ++ PS1='(.venv3) '
14:06:30 ++ export PS1
14:06:30 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
14:06:30 ++ export VIRTUAL_ENV_PROMPT
14:06:30 ++ hash -r
14:06:30 + omero admin stop
14:06:32 Waiting on shutdown. Use CTRL-C to exit
14:06:32 .+ sleep 5
14:06:47 + deactivate
14:06:47 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
14:06:47 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:06:47 + export PATH
14:06:47 + unset _OLD_VIRTUAL_PATH
14:06:47 + '[' -n '' ']'
14:06:47 + hash -r
14:06:47 + '[' -n '' ']'
14:06:47 + unset VIRTUAL_ENV
14:06:47 + unset VIRTUAL_ENV_PROMPT
14:06:47 + '[' '!' '' = nondestructive ']'
14:06:47 + unset -f deactivate
14:06:47 + rm -rf /home/omero/workspace/OMERO-server/.venv3
14:06:48 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
14:06:51 + '[' false = true ']'
14:06:51 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
14:06:51 Skipping PURGE_DATA:CleanDbAndRepo
14:06:51 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.31.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
14:06:53 Copied 1 artifact from "OMERO-build" build number 104
14:06:54 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 100
14:06:54 Copied 2 artifacts from "OMERO-build-build" build number 108
14:06:54 Copied 1 artifact from "OMERO-zarr-pixel-buffer-build" build number 91
14:06:54 [OMERO-server] $ /bin/bash -xe /tmp/jenkins561069317741149956.sh
14:06:54 + source /home/settings.env
14:06:54 ++ OMERO_DB_HOST=pg
14:06:54 ++ OMERO_DB_USER=postgres
14:06:54 ++ OMERO_DB_PASS=
14:06:54 ++ OMERO_ROOT_PASS=omero
14:06:54 ++ OMERO_DATA_DIR=/OMERO
14:06:54 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
14:06:54 + OMERO_DB_NAME=OMERO-server
14:06:54 + OMERO_DATA_DIR=/home/omero/omero-server-data
14:06:54 + mkdir -p /home/omero/omero-server-data
14:06:54 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
14:06:54 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:06:54 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:06:54 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
14:06:54 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
14:06:54 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
14:06:54 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
14:06:54 ++ ls OMERO.server-5.6.3-596-a4374e94f1-ice36-b104.zip
14:06:54 + ZIP=OMERO.server-5.6.3-596-a4374e94f1-ice36-b104.zip
14:06:54 + '[' '!' -z '' ']'
14:06:54 + DIST=OMERO.server-5.6.3-596-a4374e94f1-ice36-b104
14:06:54 + unzip OMERO.server-5.6.3-596-a4374e94f1-ice36-b104.zip
14:06:54 Archive: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104.zip
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/blitz/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/grid/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/profiles/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/error/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/grid/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/janelia/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/matplotlib/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/ncsa_paledit/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/seaborn/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/luts/wcif/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/analysis_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/annotation_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/export_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/figure_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/import_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/scripts/omero/util_scripts/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/server/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/share/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/share/licenses/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/misc/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__1/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__10/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__11/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__2/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__3/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__4/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__5/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__6/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__7/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__8/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3A__9/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3__4/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3__5/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3__6/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO3__7/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4.1__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4.2__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4.2__0/t/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4.3__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4.4__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO4__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.0__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.1__1/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.2__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__1/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__2/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__3/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/var/
14:06:54 creating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/var/tmp/
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/LICENSE.txt
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/backup.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/blitz/mail-senders.example
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/blitz/mail-server.example
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/build.properties
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/env.bat
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/env.sh
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/hibernate.properties
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/ice.config
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/logback-cli.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/logback-indexing-cli.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/logback-indexing.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/logback.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/mime.types
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/node1.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/node2.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/omero.properties
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/profiles/psql
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/rollover.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/Windows.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/error/maintainance.html
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/grid/README
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/grid/default.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/grid/templates.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/grid/windefault.xml
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/ice.config
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/internal.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/master.cfg
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/templates/robot.template
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/etc/testdropbox.config
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/history.rst
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/OMEZarrReader.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/accessors-smart.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/activation.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aggdesigner-algorithm.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aircompressor.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/antlr.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aopalliance.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/apiguardian-api.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/asm.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/avatica-core.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/avatica-metrics.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aws-java-sdk-core.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aws-java-sdk-kms.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/aws-java-sdk-s3.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/base.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-anim.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-awt-util.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-bridge.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-codec.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-constants.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-css.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-dom.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-ext.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-gvt.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-i18n.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-parser.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-script.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-shared-resources.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-svg-dom.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-svggen.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-transcoder.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-util.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/batik-xml.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/btm.jar
14:06:54 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/lib/client/calcite-core.jar
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14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/psql-footer.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/psql-header.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/schema.sql
14:06:56 inflating: OMERO.server-5.6.3-596-a4374e94f1-ice36-b104/sql/psql/OMERO5.4__0/views.sql
14:06:56 + rm -f OMERO.server-5.6.3-596-a4374e94f1-ice36-b104.zip
14:06:56 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-596-a4374e94f1-ice36-b104 /home/omero/workspace/OMERO-server/OMERO.server
14:06:56 + jacksonVersion=2.20.0
14:06:56 + awsSdkVersion=2.34.6
14:06:56 + reactiveStreamsVersion=1.0.4
14:06:56 + zarrJavaVersion=0.1.0
14:06:56 + rm -f '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/omero-zarr-pixel-buffer*.jar' '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jzarr.jar '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3fs*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-kms.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3.jar
14:06:56 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
14:06:56 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:56 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:56 --2026-04-09 14:06:56-- https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
14:06:56 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:06:56 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.19.12|:443... connected.
14:06:56 HTTP request sent, awaiting response... 200 OK
14:06:56 Length: 889211 (868K) [application/java-archive]
14:06:56 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’
14:06:56
14:06:56 0K .......... .......... .......... .......... .......... 5% 16.0M 0s
14:06:56 50K .......... .......... .......... .......... .......... 11% 3.20M 0s
14:06:56 100K .......... .......... .......... .......... .......... 17% 3.50M 0s
14:06:56 150K .......... .......... .......... .......... .......... 23% 13.9M 0s
14:06:56 200K .......... .......... .......... .......... .......... 28% 12.8M 0s
14:06:56 250K .......... .......... .......... .......... .......... 34% 12.7M 0s
14:06:56 300K .......... .......... .......... .......... .......... 40% 16.8M 0s
14:06:56 350K .......... .......... .......... .......... .......... 46% 10.9M 0s
14:06:56 400K .......... .......... .......... .......... .......... 51% 18.0M 0s
14:06:56 450K .......... .......... .......... .......... .......... 57% 15.9M 0s
14:06:56 500K .......... .......... .......... .......... .......... 63% 12.7M 0s
14:06:56 550K .......... .......... .......... .......... .......... 69% 16.4M 0s
14:06:56 600K .......... .......... .......... .......... .......... 74% 18.2M 0s
14:06:56 650K .......... .......... .......... .......... .......... 80% 15.6M 0s
14:06:56 700K .......... .......... .......... .......... .......... 86% 22.2M 0s
14:06:56 750K .......... .......... .......... .......... .......... 92% 8.94M 0s
14:06:56 800K .......... .......... .......... .......... .......... 97% 15.9M 0s
14:06:56 850K .......... ........ 100% 170M=0.08s
14:06:56
14:06:56 2026-04-09 14:06:56 (10.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’ saved [889211/889211]
14:06:56
14:06:56 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
14:06:56 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:56 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:56 --2026-04-09 14:06:56-- https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
14:06:56 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:06:56 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
14:06:57 HTTP request sent, awaiting response... 200 OK
14:06:57 Length: 183560 (179K) [application/java-archive]
14:06:57 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’
14:06:57
14:06:57 0K .......... .......... .......... .......... .......... 27% 14.2M 0s
14:06:57 50K .......... .......... .......... .......... .......... 55% 3.31M 0s
14:06:57 100K .......... .......... .......... .......... .......... 83% 3.49M 0s
14:06:57 150K .......... .......... ......... 100% 19.5M=0.03s
14:06:57
14:06:57 2026-04-09 14:06:57 (5.20 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’ saved [183560/183560]
14:06:57
14:06:57 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
14:06:57 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:57 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:57 --2026-04-09 14:06:57-- https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
14:06:57 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:06:57 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:06:57 HTTP request sent, awaiting response... 200 OK
14:06:57 Length: 1732435 (1.7M) [application/java-archive]
14:06:57 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’
14:06:57
14:06:57 0K .......... .......... .......... .......... .......... 2% 15.2M 0s
14:06:57 50K .......... .......... .......... .......... .......... 5% 3.14M 0s
14:06:57 100K .......... .......... .......... .......... .......... 8% 3.60M 0s
14:06:57 150K .......... .......... .......... .......... .......... 11% 14.9M 0s
14:06:57 200K .......... .......... .......... .......... .......... 14% 10.4M 0s
14:06:57 250K .......... .......... .......... .......... .......... 17% 13.6M 0s
14:06:57 300K .......... .......... .......... .......... .......... 20% 10.6M 0s
14:06:57 350K .......... .......... .......... .......... .......... 23% 21.1M 0s
14:06:57 400K .......... .......... .......... .......... .......... 26% 17.1M 0s
14:06:57 450K .......... .......... .......... .......... .......... 29% 17.8M 0s
14:06:57 500K .......... .......... .......... .......... .......... 32% 17.3M 0s
14:06:57 550K .......... .......... .......... .......... .......... 35% 8.45M 0s
14:06:57 600K .......... .......... .......... .......... .......... 38% 16.4M 0s
14:06:57 650K .......... .......... .......... .......... .......... 41% 25.5M 0s
14:06:57 700K .......... .......... .......... .......... .......... 44% 13.1M 0s
14:06:57 750K .......... .......... .......... .......... .......... 47% 13.4M 0s
14:06:57 800K .......... .......... .......... .......... .......... 50% 18.9M 0s
14:06:57 850K .......... .......... .......... .......... .......... 53% 14.2M 0s
14:06:57 900K .......... .......... .......... .......... .......... 56% 11.3M 0s
14:06:57 950K .......... .......... .......... .......... .......... 59% 19.3M 0s
14:06:57 1000K .......... .......... .......... .......... .......... 62% 14.9M 0s
14:06:57 1050K .......... .......... .......... .......... .......... 65% 19.0M 0s
14:06:57 1100K .......... .......... .......... .......... .......... 67% 11.0M 0s
14:06:57 1150K .......... .......... .......... .......... .......... 70% 13.4M 0s
14:06:57 1200K .......... .......... .......... .......... .......... 73% 22.4M 0s
14:06:57 1250K .......... .......... .......... .......... .......... 76% 27.2M 0s
14:06:57 1300K .......... .......... .......... .......... .......... 79% 11.4M 0s
14:06:57 1350K .......... .......... .......... .......... .......... 82% 11.2M 0s
14:06:57 1400K .......... .......... .......... .......... .......... 85% 13.1M 0s
14:06:57 1450K .......... .......... .......... .......... .......... 88% 16.9M 0s
14:06:57 1500K .......... .......... .......... .......... .......... 91% 14.8M 0s
14:06:57 1550K .......... .......... .......... .......... .......... 94% 18.5M 0s
14:06:57 1600K .......... .......... .......... .......... .......... 97% 13.2M 0s
14:06:57 1650K .......... .......... .......... .......... . 100% 21.9M=0.1s
14:06:57
14:06:57 2026-04-09 14:06:57 (12.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’ saved [1732435/1732435]
14:06:57
14:06:57 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
14:06:57 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:57 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:57 --2026-04-09 14:06:57-- https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
14:06:57 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:06:57 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:06:57 HTTP request sent, awaiting response... 200 OK
14:06:57 Length: 331034 (323K) [application/java-archive]
14:06:57 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’
14:06:57
14:06:57 0K .......... .......... .......... .......... .......... 15% 15.9M 0s
14:06:57 50K .......... .......... .......... .......... .......... 30% 3.26M 0s
14:06:57 100K .......... .......... .......... .......... .......... 46% 3.48M 0s
14:06:57 150K .......... .......... .......... .......... .......... 61% 15.3M 0s
14:06:57 200K .......... .......... .......... .......... .......... 77% 10.7M 0s
14:06:57 250K .......... .......... .......... .......... .......... 92% 18.3M 0s
14:06:57 300K .......... .......... ... 100% 12.0M=0.04s
14:06:57
14:06:57 2026-04-09 14:06:57 (7.11 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’ saved [331034/331034]
14:06:57
14:06:57 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
14:06:57 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:57 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:57 --2026-04-09 14:06:57-- https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
14:06:58 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:06:58 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:06:58 HTTP request sent, awaiting response... 200 OK
14:06:58 Length: 36400 (36K) [application/java-archive]
14:06:58 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’
14:06:58
14:06:58 0K .......... .......... .......... ..... 100% 19.8M=0.002s
14:06:58
14:06:58 2026-04-09 14:06:58 (19.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’ saved [36400/36400]
14:06:58
14:06:58 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
14:06:58 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:58 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:58 --2026-04-09 14:06:58-- https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
14:06:58 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:06:58 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:06:58 HTTP request sent, awaiting response... 200 OK
14:06:58 Length: 4083366 (3.9M) [application/java-archive]
14:06:58 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’
14:06:58
14:06:58 0K .......... .......... .......... .......... .......... 1% 14.0M 0s
14:06:58 50K .......... .......... .......... .......... .......... 2% 3.34M 1s
14:06:58 100K .......... .......... .......... .......... .......... 3% 10.8M 1s
14:06:58 150K .......... .......... .......... .......... .......... 5% 4.07M 1s
14:06:58 200K .......... .......... .......... .......... .......... 6% 13.4M 1s
14:06:58 250K .......... .......... .......... .......... .......... 7% 10.7M 1s
14:06:58 300K .......... .......... .......... .......... .......... 8% 17.1M 0s
14:06:58 350K .......... .......... .......... .......... .......... 10% 13.0M 0s
14:06:58 400K .......... .......... .......... .......... .......... 11% 24.6M 0s
14:06:58 450K .......... .......... .......... .......... .......... 12% 16.0M 0s
14:06:58 500K .......... .......... .......... .......... .......... 13% 10.8M 0s
14:06:58 550K .......... .......... .......... .......... .......... 15% 16.1M 0s
14:06:58 600K .......... .......... .......... .......... .......... 16% 8.92M 0s
14:06:58 650K .......... .......... .......... .......... .......... 17% 33.0M 0s
14:06:58 700K .......... .......... .......... .......... .......... 18% 26.9M 0s
14:06:58 750K .......... .......... .......... .......... .......... 20% 9.21M 0s
14:06:58 800K .......... .......... .......... .......... .......... 21% 21.9M 0s
14:06:58 850K .......... .......... .......... .......... .......... 22% 14.2M 0s
14:06:58 900K .......... .......... .......... .......... .......... 23% 19.8M 0s
14:06:58 950K .......... .......... .......... .......... .......... 25% 15.1M 0s
14:06:58 1000K .......... .......... .......... .......... .......... 26% 10.1M 0s
14:06:58 1050K .......... .......... .......... .......... .......... 27% 20.6M 0s
14:06:58 1100K .......... .......... .......... .......... .......... 28% 9.29M 0s
14:06:58 1150K .......... .......... .......... .......... .......... 30% 47.9M 0s
14:06:58 1200K .......... .......... .......... .......... .......... 31% 16.9M 0s
14:06:58 1250K .......... .......... .......... .......... .......... 32% 18.7M 0s
14:06:58 1300K .......... .......... .......... .......... .......... 33% 10.6M 0s
14:06:58 1350K .......... .......... .......... .......... .......... 35% 9.76M 0s
14:06:58 1400K .......... .......... .......... .......... .......... 36% 16.0M 0s
14:06:58 1450K .......... .......... .......... .......... .......... 37% 16.4M 0s
14:06:58 1500K .......... .......... .......... .......... .......... 38% 18.2M 0s
14:06:58 1550K .......... .......... .......... .......... .......... 40% 15.6M 0s
14:06:58 1600K .......... .......... .......... .......... .......... 41% 14.4M 0s
14:06:58 1650K .......... .......... .......... .......... .......... 42% 15.6M 0s
14:06:58 1700K .......... .......... .......... .......... .......... 43% 16.5M 0s
14:06:58 1750K .......... .......... .......... .......... .......... 45% 13.3M 0s
14:06:58 1800K .......... .......... .......... .......... .......... 46% 15.1M 0s
14:06:58 1850K .......... .......... .......... .......... .......... 47% 15.2M 0s
14:06:58 1900K .......... .......... .......... .......... .......... 48% 12.7M 0s
14:06:58 1950K .......... .......... .......... .......... .......... 50% 17.5M 0s
14:06:58 2000K .......... .......... .......... .......... .......... 51% 16.7M 0s
14:06:58 2050K .......... .......... .......... .......... .......... 52% 17.0M 0s
14:06:58 2100K .......... .......... .......... .......... .......... 53% 13.2M 0s
14:06:58 2150K .......... .......... .......... .......... .......... 55% 12.5M 0s
14:06:58 2200K .......... .......... .......... .......... .......... 56% 15.4M 0s
14:06:58 2250K .......... .......... .......... .......... .......... 57% 14.7M 0s
14:06:58 2300K .......... .......... .......... .......... .......... 58% 16.9M 0s
14:06:58 2350K .......... .......... .......... .......... .......... 60% 15.3M 0s
14:06:58 2400K .......... .......... .......... .......... .......... 61% 14.0M 0s
14:06:58 2450K .......... .......... .......... .......... .......... 62% 16.4M 0s
14:06:58 2500K .......... .......... .......... .......... .......... 63% 17.5M 0s
14:06:58 2550K .......... .......... .......... .......... .......... 65% 13.0M 0s
14:06:58 2600K .......... .......... .......... .......... .......... 66% 15.1M 0s
14:06:58 2650K .......... .......... .......... .......... .......... 67% 12.5M 0s
14:06:58 2700K .......... .......... .......... .......... .......... 68% 14.4M 0s
14:06:58 2750K .......... .......... .......... .......... .......... 70% 25.8M 0s
14:06:58 2800K .......... .......... .......... .......... .......... 71% 15.7M 0s
14:06:58 2850K .......... .......... .......... .......... .......... 72% 12.4M 0s
14:06:58 2900K .......... .......... .......... .......... .......... 73% 12.2M 0s
14:06:58 2950K .......... .......... .......... .......... .......... 75% 15.0M 0s
14:06:58 3000K .......... .......... .......... .......... .......... 76% 27.1M 0s
14:06:58 3050K .......... .......... .......... .......... .......... 77% 11.8M 0s
14:06:58 3100K .......... .......... .......... .......... .......... 78% 14.5M 0s
14:06:58 3150K .......... .......... .......... .......... .......... 80% 13.1M 0s
14:06:58 3200K .......... .......... .......... .......... .......... 81% 21.2M 0s
14:06:58 3250K .......... .......... .......... .......... .......... 82% 23.3M 0s
14:06:58 3300K .......... .......... .......... .......... .......... 84% 10.5M 0s
14:06:58 3350K .......... .......... .......... .......... .......... 85% 12.2M 0s
14:06:58 3400K .......... .......... .......... .......... .......... 86% 13.1M 0s
14:06:58 3450K .......... .......... .......... .......... .......... 87% 25.7M 0s
14:06:58 3500K .......... .......... .......... .......... .......... 89% 11.5M 0s
14:06:58 3550K .......... .......... .......... .......... .......... 90% 21.3M 0s
14:06:58 3600K .......... .......... .......... .......... .......... 91% 12.4M 0s
14:06:58 3650K .......... .......... .......... .......... .......... 92% 15.1M 0s
14:06:58 3700K .......... .......... .......... .......... .......... 94% 20.2M 0s
14:06:58 3750K .......... .......... .......... .......... .......... 95% 11.4M 0s
14:06:58 3800K .......... .......... .......... .......... .......... 96% 20.7M 0s
14:06:58 3850K .......... .......... .......... .......... .......... 97% 12.6M 0s
14:06:58 3900K .......... .......... .......... .......... .......... 99% 13.0M 0s
14:06:58 3950K .......... .......... .......... ....... 100% 40.0M=0.3s
14:06:58
14:06:58 2026-04-09 14:06:58 (13.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’ saved [4083366/4083366]
14:06:58
14:06:58 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
14:06:58 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:58 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:58 --2026-04-09 14:06:58-- https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
14:06:58 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:06:58 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:06:58 HTTP request sent, awaiting response... 200 OK
14:06:59 Length: 234962 (229K) [application/java-archive]
14:06:59 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’
14:06:59
14:06:59 0K .......... .......... .......... .......... .......... 21% 13.7M 0s
14:06:59 50K .......... .......... .......... .......... .......... 43% 3.20M 0s
14:06:59 100K .......... .......... .......... .......... .......... 65% 13.3M 0s
14:06:59 150K .......... .......... .......... .......... .......... 87% 3.83M 0s
14:06:59 200K .......... .......... ......... 100% 14.6M=0.04s
14:06:59
14:06:59 2026-04-09 14:06:59 (6.03 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’ saved [234962/234962]
14:06:59
14:06:59 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
14:06:59 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:59 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:59 --2026-04-09 14:06:59-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
14:06:59 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:06:59 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:06:59 HTTP request sent, awaiting response... 200 OK
14:06:59 Length: 192161 (188K) [application/java-archive]
14:06:59 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’
14:06:59
14:06:59 0K .......... .......... .......... .......... .......... 26% 15.2M 0s
14:06:59 50K .......... .......... .......... .......... .......... 53% 3.25M 0s
14:06:59 100K .......... .......... .......... .......... .......... 79% 11.1M 0s
14:06:59 150K .......... .......... .......... ....... 100% 3.42M=0.03s
14:06:59
14:06:59 2026-04-09 14:06:59 (5.48 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’ saved [192161/192161]
14:06:59
14:06:59 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
14:06:59 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:59 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:59 --2026-04-09 14:06:59-- https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
14:06:59 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:06:59 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:06:59 HTTP request sent, awaiting response... 200 OK
14:06:59 Length: 1037104 (1013K) [application/java-archive]
14:06:59 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’
14:06:59
14:06:59 0K .......... .......... .......... .......... .......... 4% 13.5M 0s
14:06:59 50K .......... .......... .......... .......... .......... 9% 3.20M 0s
14:06:59 100K .......... .......... .......... .......... .......... 14% 14.0M 0s
14:06:59 150K .......... .......... .......... .......... .......... 19% 4.05M 0s
14:06:59 200K .......... .......... .......... .......... .......... 24% 13.6M 0s
14:06:59 250K .......... .......... .......... .......... .......... 29% 13.2M 0s
14:06:59 300K .......... .......... .......... .......... .......... 34% 17.5M 0s
14:06:59 350K .......... .......... .......... .......... .......... 39% 12.8M 0s
14:06:59 400K .......... .......... .......... .......... .......... 44% 15.4M 0s
14:06:59 450K .......... .......... .......... .......... .......... 49% 13.9M 0s
14:06:59 500K .......... .......... .......... .......... .......... 54% 13.3M 0s
14:06:59 550K .......... .......... .......... .......... .......... 59% 17.3M 0s
14:06:59 600K .......... .......... .......... .......... .......... 64% 16.5M 0s
14:06:59 650K .......... .......... .......... .......... .......... 69% 13.7M 0s
14:06:59 700K .......... .......... .......... .......... .......... 74% 15.5M 0s
14:06:59 750K .......... .......... .......... .......... .......... 78% 15.3M 0s
14:06:59 800K .......... .......... .......... .......... .......... 83% 32.0M 0s
14:06:59 850K .......... .......... .......... .......... .......... 88% 9.98M 0s
14:06:59 900K .......... .......... .......... .......... .......... 93% 14.1M 0s
14:06:59 950K .......... .......... .......... .......... .......... 98% 8.63M 0s
14:06:59 1000K .......... .. 100% 245M=0.09s
14:06:59
14:06:59 2026-04-09 14:06:59 (11.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’ saved [1037104/1037104]
14:06:59
14:06:59 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
14:06:59 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:06:59 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:06:59 --2026-04-09 14:06:59-- https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
14:06:59 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:06:59 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:06:59 HTTP request sent, awaiting response... 200 OK
14:07:00 Length: 13758 (13K) [application/java-archive]
14:07:00 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’
14:07:00
14:07:00 0K .......... ... 100% 48.5M=0s
14:07:00
14:07:00 2026-04-09 14:07:00 (48.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’ saved [13758/13758]
14:07:00
14:07:00 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
14:07:00 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:00 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:00 --2026-04-09 14:07:00-- https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
14:07:00 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:00 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:00 HTTP request sent, awaiting response... 200 OK
14:07:00 Length: 962220 (940K) [application/java-archive]
14:07:00 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’
14:07:00
14:07:00 0K .......... .......... .......... .......... .......... 5% 14.9M 0s
14:07:00 50K .......... .......... .......... .......... .......... 10% 3.30M 0s
14:07:00 100K .......... .......... .......... .......... .......... 15% 10.9M 0s
14:07:00 150K .......... .......... .......... .......... .......... 21% 4.10M 0s
14:07:00 200K .......... .......... .......... .......... .......... 26% 10.8M 0s
14:07:00 250K .......... .......... .......... .......... .......... 31% 16.6M 0s
14:07:00 300K .......... .......... .......... .......... .......... 37% 13.2M 0s
14:07:00 350K .......... .......... .......... .......... .......... 42% 17.1M 0s
14:07:00 400K .......... .......... .......... .......... .......... 47% 12.7M 0s
14:07:00 450K .......... .......... .......... .......... .......... 53% 12.7M 0s
14:07:00 500K .......... .......... .......... .......... .......... 58% 17.3M 0s
14:07:00 550K .......... .......... .......... .......... .......... 63% 13.4M 0s
14:07:00 600K .......... .......... .......... .......... .......... 69% 17.2M 0s
14:07:00 650K .......... .......... .......... .......... .......... 74% 12.0M 0s
14:07:00 700K .......... .......... .......... .......... .......... 79% 24.4M 0s
14:07:00 750K .......... .......... .......... .......... .......... 85% 13.1M 0s
14:07:00 800K .......... .......... .......... .......... .......... 90% 9.56M 0s
14:07:00 850K .......... .......... .......... .......... .......... 95% 27.0M 0s
14:07:00 900K .......... .......... .......... ......... 100% 10.7M=0.09s
14:07:00
14:07:00 2026-04-09 14:07:00 (10.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’ saved [962220/962220]
14:07:00
14:07:00 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
14:07:00 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:00 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:00 --2026-04-09 14:07:00-- https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
14:07:00 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:00 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:00 HTTP request sent, awaiting response... 200 OK
14:07:00 Length: 30963 (30K) [application/java-archive]
14:07:00 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’
14:07:00
14:07:00 0K .......... .......... .......... 100% 16.4M=0.002s
14:07:00
14:07:00 2026-04-09 14:07:00 (16.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’ saved [30963/30963]
14:07:00
14:07:00 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
14:07:00 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:00 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:00 --2026-04-09 14:07:00-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
14:07:00 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:00 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:00 HTTP request sent, awaiting response... 200 OK
14:07:00 Length: 241618 (236K) [application/java-archive]
14:07:00 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’
14:07:00
14:07:00 0K .......... .......... .......... .......... .......... 21% 13.4M 0s
14:07:00 50K .......... .......... .......... .......... .......... 42% 3.20M 0s
14:07:00 100K .......... .......... .......... .......... .......... 63% 13.1M 0s
14:07:00 150K .......... .......... .......... .......... .......... 84% 3.98M 0s
14:07:00 200K .......... .......... .......... ..... 100% 13.0M=0.04s
14:07:00
14:07:00 2026-04-09 14:07:00 (6.13 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’ saved [241618/241618]
14:07:00
14:07:00 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
14:07:00 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:00 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:00 --2026-04-09 14:07:00-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
14:07:01 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:01 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:01 HTTP request sent, awaiting response... 200 OK
14:07:01 Length: 91685 (90K) [application/java-archive]
14:07:01 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’
14:07:01
14:07:01 0K .......... .......... .......... .......... .......... 55% 15.0M 0s
14:07:01 50K .......... .......... .......... ......... 100% 2.74M=0.02s
14:07:01
14:07:01 2026-04-09 14:07:01 (5.04 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’ saved [91685/91685]
14:07:01
14:07:01 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
14:07:01 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:01 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:01 --2026-04-09 14:07:01-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
14:07:01 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:01 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:01 HTTP request sent, awaiting response... 200 OK
14:07:01 Length: 66309 (65K) [application/java-archive]
14:07:01 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’
14:07:01
14:07:01 0K .......... .......... .......... .......... .......... 77% 9.44M 0s
14:07:01 50K .......... .... 100% 16.1M=0.006s
14:07:01
14:07:01 2026-04-09 14:07:01 (10.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’ saved [66309/66309]
14:07:01
14:07:01 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
14:07:01 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:01 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:01 --2026-04-09 14:07:01-- https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
14:07:01 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:01 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:01 HTTP request sent, awaiting response... 200 OK
14:07:01 Length: 33040 (32K) [application/java-archive]
14:07:01 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’
14:07:01
14:07:01 0K .......... .......... .......... .. 100% 15.9M=0.002s
14:07:01
14:07:01 2026-04-09 14:07:01 (15.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’ saved [33040/33040]
14:07:01
14:07:01 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
14:07:01 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:01 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:01 --2026-04-09 14:07:01-- https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
14:07:01 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:01 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:02 HTTP request sent, awaiting response... 200 OK
14:07:02 Length: 77013 (75K) [application/java-archive]
14:07:02 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’
14:07:02
14:07:02 0K .......... .......... .......... .......... .......... 66% 14.9M 0s
14:07:02 50K .......... .......... ..... 100% 1.86M=0.02s
14:07:02
14:07:02 2026-04-09 14:07:02 (4.44 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’ saved [77013/77013]
14:07:02
14:07:02 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
14:07:02 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:02 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:02 --2026-04-09 14:07:02-- https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
14:07:02 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:07:02 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:02 HTTP request sent, awaiting response... 200 OK
14:07:02 Length: 16323 (16K) [application/java-archive]
14:07:02 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’
14:07:02
14:07:02 0K .......... ..... 100% 28.3M=0.001s
14:07:02
14:07:02 2026-04-09 14:07:02 (28.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’ saved [16323/16323]
14:07:02
14:07:02 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
14:07:02 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:02 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:02 --2026-04-09 14:07:02-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
14:07:02 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:02 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:02 HTTP request sent, awaiting response... 200 OK
14:07:02 Length: 69370 (68K) [application/java-archive]
14:07:02 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’
14:07:02
14:07:02 0K .......... .......... .......... .......... .......... 73% 14.3M 0s
14:07:02 50K .......... ....... 100% 18.7M=0.004s
14:07:02
14:07:02 2026-04-09 14:07:02 (15.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’ saved [69370/69370]
14:07:02
14:07:02 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
14:07:02 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:02 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:02 --2026-04-09 14:07:02-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
14:07:02 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:02 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:02 HTTP request sent, awaiting response... 200 OK
14:07:02 Length: 102272 (100K) [application/java-archive]
14:07:02 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’
14:07:02
14:07:02 0K .......... .......... .......... .......... .......... 50% 16.0M 0s
14:07:02 50K .......... .......... .......... .......... ......... 100% 3.18M=0.02s
14:07:02
14:07:02 2026-04-09 14:07:02 (5.31 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’ saved [102272/102272]
14:07:02
14:07:02 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
14:07:02 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:02 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:02 --2026-04-09 14:07:02-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
14:07:03 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:03 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:03 HTTP request sent, awaiting response... 200 OK
14:07:03 Length: 69585 (68K) [application/java-archive]
14:07:03 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’
14:07:03
14:07:03 0K .......... .......... .......... .......... .......... 73% 14.5M 0s
14:07:03 50K .......... ....... 100% 1.38M=0.02s
14:07:03
14:07:03 2026-04-09 14:07:03 (4.14 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’ saved [69585/69585]
14:07:03
14:07:03 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
14:07:03 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:03 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:03 --2026-04-09 14:07:03-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
14:07:03 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:03 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:03 HTTP request sent, awaiting response... 200 OK
14:07:03 Length: 8044 (7.9K) [application/java-archive]
14:07:03 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’
14:07:03
14:07:03 0K ....... 100% 42.9M=0s
14:07:03
14:07:03 2026-04-09 14:07:03 (42.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’ saved [8044/8044]
14:07:03
14:07:03 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
14:07:03 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:03 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:03 --2026-04-09 14:07:03-- https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
14:07:03 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:03 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:03 HTTP request sent, awaiting response... 200 OK
14:07:03 Length: 17774 (17K) [application/java-archive]
14:07:03 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’
14:07:03
14:07:03 0K .......... ....... 100% 23.9M=0.001s
14:07:03
14:07:03 2026-04-09 14:07:03 (23.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’ saved [17774/17774]
14:07:03
14:07:03 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
14:07:03 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:03 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:03 --2026-04-09 14:07:03-- https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
14:07:03 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:03 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:04 HTTP request sent, awaiting response... 200 OK
14:07:04 Length: 13168 (13K) [application/java-archive]
14:07:04 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’
14:07:04
14:07:04 0K .......... .. 100% 52.6M=0s
14:07:04
14:07:04 2026-04-09 14:07:04 (52.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’ saved [13168/13168]
14:07:04
14:07:04 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
14:07:04 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:04 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:04 --2026-04-09 14:07:04-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
14:07:04 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
14:07:04 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:04 HTTP request sent, awaiting response... 200 OK
14:07:04 Length: 17475 (17K) [application/java-archive]
14:07:04 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’
14:07:04
14:07:04 0K .......... ....... 100% 12.4M=0.001s
14:07:04
14:07:04 2026-04-09 14:07:04 (12.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’ saved [17475/17475]
14:07:04
14:07:04 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
14:07:04 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:04 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:04 --2026-04-09 14:07:04-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
14:07:04 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:04 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:04 HTTP request sent, awaiting response... 200 OK
14:07:04 Length: 168314 (164K) [application/java-archive]
14:07:04 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’
14:07:04
14:07:04 0K .......... .......... .......... .......... .......... 30% 15.4M 0s
14:07:04 50K .......... .......... .......... .......... .......... 60% 3.19M 0s
14:07:04 100K .......... .......... .......... .......... .......... 91% 18.8M 0s
14:07:04 150K .......... .... 100% 1.22M=0.03s
14:07:04
14:07:04 2026-04-09 14:07:04 (4.93 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’ saved [168314/168314]
14:07:04
14:07:04 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
14:07:04 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:04 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:04 --2026-04-09 14:07:04-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
14:07:04 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:04 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:04 HTTP request sent, awaiting response... 200 OK
14:07:05 Length: 8705 (8.5K) [application/java-archive]
14:07:05 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’
14:07:05
14:07:05 0K ........ 100% 44.5M=0s
14:07:05
14:07:05 2026-04-09 14:07:05 (44.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’ saved [8705/8705]
14:07:05
14:07:05 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
14:07:05 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:05 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:05 --2026-04-09 14:07:05-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
14:07:05 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:07:05 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:05 HTTP request sent, awaiting response... 200 OK
14:07:05 Length: 45762 (45K) [application/java-archive]
14:07:05 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’
14:07:05
14:07:05 0K .......... .......... .......... .......... .... 100% 14.0M=0.003s
14:07:05
14:07:05 2026-04-09 14:07:05 (14.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’ saved [45762/45762]
14:07:05
14:07:05 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
14:07:05 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:05 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:05 --2026-04-09 14:07:05-- https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
14:07:05 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:07:05 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:05 HTTP request sent, awaiting response... 200 OK
14:07:05 Length: 33225 (32K) [application/java-archive]
14:07:05 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’
14:07:05
14:07:05 0K .......... .......... .......... .. 100% 21.1M=0.002s
14:07:05
14:07:05 2026-04-09 14:07:05 (21.1 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’ saved [33225/33225]
14:07:05
14:07:05 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
14:07:05 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:05 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:05 --2026-04-09 14:07:05-- https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
14:07:05 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:05 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:06 HTTP request sent, awaiting response... 200 OK
14:07:06 Length: 27262 (27K) [application/java-archive]
14:07:06 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’
14:07:06
14:07:06 0K .......... .......... ...... 100% 19.4M=0.001s
14:07:06
14:07:06 2026-04-09 14:07:06 (19.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’ saved [27262/27262]
14:07:06
14:07:06 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
14:07:06 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:06 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:06 --2026-04-09 14:07:06-- https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
14:07:06 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:06 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:06 HTTP request sent, awaiting response... 200 OK
14:07:06 Length: 292688 (286K) [application/java-archive]
14:07:06 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’
14:07:06
14:07:06 0K .......... .......... .......... .......... .......... 17% 13.4M 0s
14:07:06 50K .......... .......... .......... .......... .......... 34% 3.14M 0s
14:07:06 100K .......... .......... .......... .......... .......... 52% 13.3M 0s
14:07:06 150K .......... .......... .......... .......... .......... 69% 3.77M 0s
14:07:06 200K .......... .......... .......... .......... .......... 87% 10.4M 0s
14:07:06 250K .......... .......... .......... ..... 100% 36.3M=0.04s
14:07:06
14:07:06 2026-04-09 14:07:06 (6.73 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’ saved [292688/292688]
14:07:06
14:07:06 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
14:07:06 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:06 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:06 --2026-04-09 14:07:06-- https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
14:07:06 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:06 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:06 HTTP request sent, awaiting response... 200 OK
14:07:06 Length: 50524 (49K) [application/java-archive]
14:07:06 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’
14:07:06
14:07:06 0K .......... .......... .......... .......... ......... 100% 15.6M=0.003s
14:07:06
14:07:06 2026-04-09 14:07:06 (15.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’ saved [50524/50524]
14:07:06
14:07:06 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
14:07:06 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:06 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:06 --2026-04-09 14:07:06-- https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
14:07:06 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:06 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:06 HTTP request sent, awaiting response... 200 OK
14:07:06 Length: 44371 (43K) [application/java-archive]
14:07:06 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’
14:07:06
14:07:06 0K .......... .......... .......... .......... ... 100% 17.6M=0.002s
14:07:06
14:07:06 2026-04-09 14:07:06 (17.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’ saved [44371/44371]
14:07:06
14:07:06 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
14:07:06 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:06 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:06 --2026-04-09 14:07:06-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
14:07:07 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
14:07:07 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:07 HTTP request sent, awaiting response... 200 OK
14:07:07 Length: 31487 (31K) [application/java-archive]
14:07:07 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’
14:07:07
14:07:07 0K .......... .......... .......... 100% 20.3M=0.001s
14:07:07
14:07:07 2026-04-09 14:07:07 (20.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’ saved [31487/31487]
14:07:07
14:07:07 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
14:07:07 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:07 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:07 --2026-04-09 14:07:07-- https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
14:07:07 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:07:07 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:07 HTTP request sent, awaiting response... 200 OK
14:07:07 Length: 535001 (522K) [application/java-archive]
14:07:07 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’
14:07:07
14:07:07 0K .......... .......... .......... .......... .......... 9% 14.9M 0s
14:07:07 50K .......... .......... .......... .......... .......... 19% 3.24M 0s
14:07:07 100K .......... .......... .......... .......... .......... 28% 3.42M 0s
14:07:07 150K .......... .......... .......... .......... .......... 38% 15.2M 0s
14:07:07 200K .......... .......... .......... .......... .......... 47% 10.4M 0s
14:07:07 250K .......... .......... .......... .......... .......... 57% 17.6M 0s
14:07:07 300K .......... .......... .......... .......... .......... 66% 13.0M 0s
14:07:07 350K .......... .......... .......... .......... .......... 76% 10.2M 0s
14:07:07 400K .......... .......... .......... .......... .......... 86% 17.6M 0s
14:07:07 450K .......... .......... .......... .......... .......... 95% 16.4M 0s
14:07:07 500K .......... .......... .. 100% 139M=0.06s
14:07:07
14:07:07 2026-04-09 14:07:07 (8.84 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’ saved [535001/535001]
14:07:07
14:07:07 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
14:07:07 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:07 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:07 --2026-04-09 14:07:07-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
14:07:07 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
14:07:07 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
14:07:07 HTTP request sent, awaiting response... 200 OK
14:07:07 Length: 8798 (8.6K) [application/java-archive]
14:07:07 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’
14:07:07
14:07:07 0K ........ 100% 43.7M=0s
14:07:07
14:07:07 2026-04-09 14:07:07 (43.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’ saved [8798/8798]
14:07:07
14:07:07 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
14:07:07 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:07:07 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:07:07 --2026-04-09 14:07:07-- https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
14:07:07 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
14:07:07 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
14:07:08 HTTP request sent, awaiting response... 200 OK
14:07:08 Length: 11640 (11K) [application/java-archive]
14:07:08 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’
14:07:08
14:07:08 0K .......... . 100% 30.4M=0s
14:07:08
14:07:08 2026-04-09 14:07:08 (30.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’ saved [11640/11640]
14:07:08
14:07:08 + for x in *.jar
14:07:08 + mv omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server
14:07:08 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
14:07:08 ++ deactivate nondestructive
14:07:08 ++ '[' -n '' ']'
14:07:08 ++ '[' -n '' ']'
14:07:08 ++ hash -r
14:07:08 ++ '[' -n '' ']'
14:07:08 ++ unset VIRTUAL_ENV
14:07:08 ++ unset VIRTUAL_ENV_PROMPT
14:07:08 ++ '[' '!' nondestructive = nondestructive ']'
14:07:08 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
14:07:08 ++ export VIRTUAL_ENV
14:07:08 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:07:08 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:07:08 ++ export PATH
14:07:08 ++ '[' -n '' ']'
14:07:08 ++ '[' -z '' ']'
14:07:08 ++ _OLD_VIRTUAL_PS1=
14:07:08 ++ PS1='(.venv3) '
14:07:08 ++ export PS1
14:07:08 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
14:07:08 ++ export VIRTUAL_ENV_PROMPT
14:07:08 ++ hash -r
14:07:08 + pip install -U pip
14:07:08 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
14:07:08 Collecting pip
14:07:08 Using cached pip-26.0.1-py3-none-any.whl (1.8 MB)
14:07:08 Installing collected packages: pip
14:07:08 Attempting uninstall: pip
14:07:08 Found existing installation: pip 22.3.1
14:07:08 Uninstalling pip-22.3.1:
14:07:08 Successfully uninstalled pip-22.3.1
14:07:09 Successfully installed pip-26.0.1
14:07:09 WARNING: There was an error checking the latest version of pip.
14:07:09 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
14:07:10 Collecting zeroc-ice==3.6.5
14:07:10 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
14:07:13 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 12.0 MB/s 0:00:03
14:07:13 Installing collected packages: zeroc-ice
14:07:14 Successfully installed zeroc-ice-3.6.5
14:07:14 + pip install markdown
14:07:15 Collecting markdown
14:07:15 Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
14:07:15 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
14:07:15 Installing collected packages: markdown
14:07:15 Successfully installed markdown-3.10.2
14:07:15 + pip install reportlab
14:07:15 Collecting reportlab
14:07:15 Using cached reportlab-4.4.10-py3-none-any.whl.metadata (1.7 kB)
14:07:16 Collecting pillow>=9.0.0 (from reportlab)
14:07:16 Using cached pillow-12.2.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
14:07:16 Collecting charset-normalizer (from reportlab)
14:07:16 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB)
14:07:16 Using cached reportlab-4.4.10-py3-none-any.whl (2.0 MB)
14:07:16 Using cached pillow-12.2.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.1 MB)
14:07:16 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB)
14:07:16 Installing collected packages: pillow, charset-normalizer, reportlab
14:07:18
14:07:18 Successfully installed charset-normalizer-3.4.7 pillow-12.2.0 reportlab-4.4.10
14:07:18 + pip install omego
14:07:19 Collecting omego
14:07:19 Using cached omego-0.8.0-py3-none-any.whl.metadata (1.9 kB)
14:07:19 Collecting future (from omego)
14:07:19 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
14:07:19 Collecting yaclifw>=0.1.1 (from omego)
14:07:19 Using cached yaclifw-0.2.0-py3-none-any.whl
14:07:19 Collecting six (from yaclifw>=0.1.1->omego)
14:07:19 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
14:07:19 Using cached omego-0.8.0-py3-none-any.whl (41 kB)
14:07:19 Using cached future-1.0.0-py3-none-any.whl (491 kB)
14:07:19 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
14:07:19 Installing collected packages: six, future, yaclifw, omego
14:07:19
14:07:19 Successfully installed future-1.0.0 omego-0.8.0 six-1.17.0 yaclifw-0.2.0
14:07:19 + pip install tables
14:07:20 Collecting tables
14:07:20 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
14:07:20 Collecting numpy>=1.20.0 (from tables)
14:07:20 Using cached numpy-2.4.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
14:07:20 Collecting numexpr>=2.6.2 (from tables)
14:07:20 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
14:07:20 Collecting packaging (from tables)
14:07:20 Using cached packaging-26.0-py3-none-any.whl.metadata (3.3 kB)
14:07:20 Collecting py-cpuinfo (from tables)
14:07:20 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
14:07:20 Collecting blosc2>=2.3.0 (from tables)
14:07:20 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (6.2 kB)
14:07:20 Collecting ndindex (from blosc2>=2.3.0->tables)
14:07:20 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
14:07:20 Collecting msgpack (from blosc2>=2.3.0->tables)
14:07:20 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
14:07:20 Collecting requests (from blosc2>=2.3.0->tables)
14:07:20 Using cached requests-2.33.1-py3-none-any.whl.metadata (4.8 kB)
14:07:20 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.7)
14:07:20 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
14:07:20 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
14:07:20 Collecting urllib3<3,>=1.26 (from requests->blosc2>=2.3.0->tables)
14:07:20 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
14:07:20 Collecting certifi>=2023.5.7 (from requests->blosc2>=2.3.0->tables)
14:07:20 Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB)
14:07:20 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
14:07:20 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (5.2 MB)
14:07:20 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
14:07:20 Using cached numpy-2.4.4-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
14:07:20 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
14:07:20 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
14:07:20 Using cached packaging-26.0-py3-none-any.whl (74 kB)
14:07:20 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
14:07:20 Using cached requests-2.33.1-py3-none-any.whl (64 kB)
14:07:20 Using cached idna-3.11-py3-none-any.whl (71 kB)
14:07:20 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
14:07:20 Using cached certifi-2026.2.25-py3-none-any.whl (153 kB)
14:07:21 Installing collected packages: py-cpuinfo, urllib3, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables
14:07:24
14:07:24 Successfully installed blosc2-4.1.2 certifi-2026.2.25 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.4 packaging-26.0 py-cpuinfo-9.0.0 requests-2.33.1 tables-3.11.1 urllib3-2.6.3
14:07:24 + pip install jinja2
14:07:24 Collecting jinja2
14:07:24 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
14:07:24 Collecting MarkupSafe>=2.0 (from jinja2)
14:07:24 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
14:07:24 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
14:07:24 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
14:07:24 Installing collected packages: MarkupSafe, jinja2
14:07:25
14:07:25 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
14:07:25 + pip install omero-py
14:07:25 Collecting omero-py
14:07:25 Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
14:07:25 Collecting appdirs (from omero-py)
14:07:25 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
14:07:25 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
14:07:25 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.4)
14:07:25 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.2.0)
14:07:25 Collecting PyYAML (from omero-py)
14:07:25 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
14:07:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
14:07:25 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.33.1)
14:07:25 Collecting portalocker (from omero-py)
14:07:25 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
14:07:25 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.7)
14:07:25 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
14:07:25 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
14:07:25 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.2.25)
14:07:25 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
14:07:25 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
14:07:25 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
14:07:25 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
14:07:25 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
14:07:27
14:07:27 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.22.1 portalocker-3.2.0
14:07:27 + pip install pyarrow
14:07:28 Collecting pyarrow
14:07:28 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.1 kB)
14:07:28 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl (47.6 MB)
14:07:28 Installing collected packages: pyarrow
14:07:29 Successfully installed pyarrow-23.0.1
14:07:29 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
14:07:30 Collecting omero-metadata
14:07:30 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-lu_41bia/omero-metadata_9236a38504844ca68410c31d61e29339
14:07:30 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-lu_41bia/omero-metadata_9236a38504844ca68410c31d61e29339
14:07:31 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit c957ce9fb86816ec050e8ea6af4de8a861899935
14:07:31 Installing build dependencies: started
14:07:31 Installing build dependencies: finished with status 'done'
14:07:31 Getting requirements to build wheel: started
14:07:32 Getting requirements to build wheel: finished with status 'done'
14:07:32 Preparing metadata (pyproject.toml): started
14:07:32 Preparing metadata (pyproject.toml): finished with status 'done'
14:07:32 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.22.1)
14:07:32 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
14:07:32 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
14:07:32 Collecting pandas (from omero-metadata)
14:07:32 Using cached pandas-3.0.2-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
14:07:32 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
14:07:32 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
14:07:32 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.4)
14:07:32 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.2.0)
14:07:32 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
14:07:32 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.33.1)
14:07:32 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
14:07:32 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
14:07:32 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
14:07:32 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
14:07:32 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
14:07:32 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.7)
14:07:32 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
14:07:32 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.3)
14:07:32 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.2.25)
14:07:32 Using cached pandas-3.0.2-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.3 MB)
14:07:32 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
14:07:32 Building wheels for collected packages: omero-metadata
14:07:32 Building wheel for omero-metadata (pyproject.toml): started
14:07:33 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
14:07:33 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39373 sha256=4c6a2219b63d717e7cc61b6b75f04fced310363af7bdcd03618c95e97a22b9b4
14:07:33 Stored in directory: /tmp/pip-ephem-wheel-cache-di5vq703/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
14:07:33 Successfully built omero-metadata
14:07:33 Installing collected packages: python-dateutil, pandas, omero-metadata
14:07:37
14:07:37 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.2 python-dateutil-2.9.0.post0
14:07:37 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
14:07:37 Collecting omero-cli-render
14:07:37 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-_yv1x9a6/omero-cli-render_930d692220984349820ccc05511bf071
14:07:37 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-_yv1x9a6/omero-cli-render_930d692220984349820ccc05511bf071
14:07:38 Running command git checkout -b merge_ci --track origin/merge_ci
14:07:39 Switched to a new branch 'merge_ci'
14:07:39 branch 'merge_ci' set up to track 'origin/merge_ci'.
14:07:39 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 646eb4b297abd337db2e44d2b06c962c5a93c3a0
14:07:39 Installing build dependencies: started
14:07:39 Installing build dependencies: finished with status 'done'
14:07:39 Getting requirements to build wheel: started
14:07:40 Getting requirements to build wheel: finished with status 'done'
14:07:40 Preparing metadata (pyproject.toml): started
14:07:40 Preparing metadata (pyproject.toml): finished with status 'done'
14:07:40 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
14:07:40 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.22.1)
14:07:40 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
14:07:40 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
14:07:40 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.4)
14:07:40 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.2.0)
14:07:40 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
14:07:40 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.33.1)
14:07:40 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
14:07:40 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.7)
14:07:40 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
14:07:40 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.3)
14:07:40 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.2.25)
14:07:40 Building wheels for collected packages: omero-cli-render
14:07:40 Building wheel for omero-cli-render (pyproject.toml): started
14:07:40 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
14:07:40 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19839 sha256=f15de030735ac52edf496c5448f272e892cdc29fab14672709dc278e7f2379ea
14:07:40 Stored in directory: /tmp/pip-ephem-wheel-cache-vj66oqlz/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
14:07:40 Successfully built omero-cli-render
14:07:40 Installing collected packages: omero-cli-render
14:07:40 Successfully installed omero-cli-render-0.8.2.dev0
14:07:40 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
14:07:41 Collecting omero-cli-duplicate
14:07:41 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-dzhfuc7_/omero-cli-duplicate_19cda1f4205e47ada57307b821075613
14:07:41 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-dzhfuc7_/omero-cli-duplicate_19cda1f4205e47ada57307b821075613
14:07:42 Running command git checkout -b merge_ci --track origin/merge_ci
14:07:42 Switched to a new branch 'merge_ci'
14:07:42 branch 'merge_ci' set up to track 'origin/merge_ci'.
14:07:42 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit c3b8560b30ee45fb35f400f7d1cb3bbef0cc7bc0
14:07:42 Installing build dependencies: started
14:07:43 Installing build dependencies: finished with status 'done'
14:07:43 Getting requirements to build wheel: started
14:07:43 Getting requirements to build wheel: finished with status 'done'
14:07:43 Preparing metadata (pyproject.toml): started
14:07:43 Preparing metadata (pyproject.toml): finished with status 'done'
14:07:43 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.1)
14:07:43 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
14:07:43 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
14:07:43 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.4)
14:07:43 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.2.0)
14:07:43 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
14:07:43 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
14:07:43 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.33.1)
14:07:43 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
14:07:43 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.7)
14:07:43 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
14:07:43 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
14:07:43 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.2.25)
14:07:43 Building wheels for collected packages: omero-cli-duplicate
14:07:43 Building wheel for omero-cli-duplicate (pyproject.toml): started
14:07:44 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
14:07:44 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11539 sha256=59c7f6d7d35fe696b4b449e2bbd4520ea1a7d479ac96d9faebd6f560685617ea
14:07:44 Stored in directory: /tmp/pip-ephem-wheel-cache-3z32wal6/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
14:07:44 Successfully built omero-cli-duplicate
14:07:44 Installing collected packages: omero-cli-duplicate
14:07:44 Successfully installed omero-cli-duplicate-0.4.1.dev0
14:07:44 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
14:07:44 Collecting omero-cli-zarr
14:07:44 Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-2i9m5ib6/omero-cli-zarr_5e4495df3703495ab1b59b30470d7dca
14:07:44 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-2i9m5ib6/omero-cli-zarr_5e4495df3703495ab1b59b30470d7dca
14:07:45 Running command git checkout -b merge_ci --track origin/merge_ci
14:07:45 Switched to a new branch 'merge_ci'
14:07:45 branch 'merge_ci' set up to track 'origin/merge_ci'.
14:07:45 Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit 137c861aa32fa65fef013850946521d8c9a0a326
14:07:45 Installing build dependencies: started
14:07:46 Installing build dependencies: finished with status 'done'
14:07:46 Getting requirements to build wheel: started
14:07:46 Getting requirements to build wheel: finished with status 'done'
14:07:46 Installing backend dependencies: started
14:07:47 Installing backend dependencies: finished with status 'done'
14:07:47 Preparing metadata (pyproject.toml): started
14:07:47 Preparing metadata (pyproject.toml): finished with status 'done'
14:07:47 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.22.1)
14:07:48 Collecting ome-zarr>=0.13.0 (from omero-cli-zarr)
14:07:48 Using cached ome_zarr-0.15.0-py3-none-any.whl.metadata (2.9 kB)
14:07:48 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.4.4)
14:07:48 Collecting dask<=2026.1.1,>=2025.12.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached dask-2026.1.1-py3-none-any.whl.metadata (3.8 kB)
14:07:48 Collecting zarr>=3.0.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached zarr-3.1.6-py3-none-any.whl.metadata (8.6 kB)
14:07:48 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached fsspec-2026.3.0-py3-none-any.whl.metadata (10 kB)
14:07:48 Collecting aiohttp (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached aiohttp-3.13.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
14:07:48 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.33.1)
14:07:48 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
14:07:48 Collecting toolz (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
14:07:48 Collecting rangehttpserver (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
14:07:48 Collecting Deprecated (from ome-zarr>=0.13.0->omero-cli-zarr)
14:07:48 Using cached deprecated-1.3.1-py2.py3-none-any.whl.metadata (5.9 kB)
14:07:49 Collecting click>=8.1 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached click-8.3.2-py3-none-any.whl.metadata (2.6 kB)
14:07:49 Collecting cloudpickle>=3.0.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
14:07:49 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (26.0)
14:07:49 Collecting partd>=1.4.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
14:07:49 Requirement already satisfied: pyyaml>=5.3.1 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (6.0.3)
14:07:49 Collecting importlib_metadata>=4.13.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached importlib_metadata-9.0.0-py3-none-any.whl.metadata (4.5 kB)
14:07:49 Collecting s3fs>2024.2.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached s3fs-2026.3.0-py3-none-any.whl.metadata (1.2 kB)
14:07:49 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
14:07:49 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
14:07:49 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
14:07:49 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.2.0)
14:07:49 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
14:07:49 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
14:07:49 Collecting locket (from partd>=1.4.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
14:07:49 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached aiobotocore-3.4.0-py3-none-any.whl.metadata (27 kB)
14:07:49 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
14:07:49 Collecting botocore<1.42.85,>=1.42.79 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached botocore-1.42.84-py3-none-any.whl.metadata (5.9 kB)
14:07:49 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.9.0.post0)
14:07:49 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
14:07:49 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:49 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
14:07:50 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
14:07:50 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
14:07:50 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
14:07:50 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached attrs-26.1.0-py3-none-any.whl.metadata (8.8 kB)
14:07:50 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
14:07:50 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
14:07:50 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
14:07:50 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.42.85,>=1.42.79->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.6.3)
14:07:50 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (1.17.0)
14:07:50 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr) (3.11)
14:07:50 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:50 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
14:07:51 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
14:07:51 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
14:07:51 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached imageio-2.37.3-py3-none-any.whl.metadata (9.7 kB)
14:07:51 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached tifffile-2026.3.3-py3-none-any.whl.metadata (31 kB)
14:07:51 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached lazy_loader-0.5-py3-none-any.whl.metadata (5.9 kB)
14:07:51 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
14:07:51 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
14:07:51 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:07:51 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
14:07:51 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (3.4.7)
14:07:51 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (2026.2.25)
14:07:51 Using cached ome_zarr-0.15.0-py3-none-any.whl (45 kB)
14:07:51 Using cached dask-2026.1.1-py3-none-any.whl (1.5 MB)
14:07:51 Using cached click-8.3.2-py3-none-any.whl (108 kB)
14:07:51 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
14:07:51 Using cached fsspec-2026.3.0-py3-none-any.whl (202 kB)
14:07:51 Using cached importlib_metadata-9.0.0-py3-none-any.whl (27 kB)
14:07:51 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
14:07:51 Using cached s3fs-2026.3.0-py3-none-any.whl (32 kB)
14:07:51 Using cached aiobotocore-3.4.0-py3-none-any.whl (88 kB)
14:07:51 Using cached aiohttp-3.13.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.8 MB)
14:07:51 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
14:07:51 Using cached botocore-1.42.84-py3-none-any.whl (14.8 MB)
14:07:51 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
14:07:51 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
14:07:51 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (114 kB)
14:07:51 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (102 kB)
14:07:51 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
14:07:51 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
14:07:51 Using cached attrs-26.1.0-py3-none-any.whl (67 kB)
14:07:51 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
14:07:51 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
14:07:51 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
14:07:51 Using cached imageio-2.37.3-py3-none-any.whl (317 kB)
14:07:51 Using cached lazy_loader-0.5-py3-none-any.whl (8.0 kB)
14:07:51 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
14:07:51 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.3 MB)
14:07:51 Using cached tifffile-2026.3.3-py3-none-any.whl (243 kB)
14:07:51 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
14:07:51 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
14:07:51 Using cached zarr-3.1.6-py3-none-any.whl (295 kB)
14:07:51 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
14:07:51 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
14:07:51 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
14:07:51 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
14:07:51 Using cached deprecated-1.3.1-py2.py3-none-any.whl (11 kB)
14:07:51 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
14:07:51 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
14:07:51 Building wheels for collected packages: omero-cli-zarr
14:07:51 Building wheel for omero-cli-zarr (pyproject.toml): started
14:07:52 Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
14:07:52 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev162+g137c861-py3-none-any.whl size=38288 sha256=b7c8911c698f27060c8baebd03fe5283f151c93a97bcff0e027d555f82c62071
14:07:52 Stored in directory: /tmp/pip-ephem-wheel-cache-dy425m7o/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
14:07:52 Successfully built omero-cli-zarr
14:07:52 Installing collected packages: rangehttpserver, zipp, wrapt, typing-extensions, toolz, tifffile, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, partd, numcodecs, importlib_metadata, Deprecated, botocore, aiosignal, zarr, dask, aiohttp, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
14:08:01
14:08:01 Successfully installed Deprecated-1.3.1 aiobotocore-3.4.0 aiohappyeyeballs-2.6.1 aiohttp-3.13.5 aioitertools-0.13.0 aiosignal-1.4.0 attrs-26.1.0 botocore-1.42.84 click-8.3.2 cloudpickle-3.1.2 dask-2026.1.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.3.0 google-crc32c-1.8.0 imageio-2.37.3 importlib_metadata-9.0.0 jmespath-1.1.0 lazy-loader-0.5 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.15.0 omero-cli-zarr-0.5.5.dev162+g137c861 partd-1.4.2 propcache-0.4.1 rangehttpserver-1.4.0 s3fs-2026.3.0 scikit-image-0.26.0 scipy-1.17.1 tifffile-2026.3.3 toolz-1.1.0 typing-extensions-4.15.0 wrapt-2.1.2 yarl-1.23.0 zarr-3.1.6 zipp-3.23.0
14:08:01 + pip install omero-certificates
14:08:02 Collecting omero-certificates
14:08:02 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
14:08:02 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.1)
14:08:02 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
14:08:02 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
14:08:02 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.4)
14:08:02 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.2.0)
14:08:02 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
14:08:02 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
14:08:02 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.33.1)
14:08:02 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
14:08:02 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.7)
14:08:02 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
14:08:02 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
14:08:02 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.2.25)
14:08:02 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
14:08:02 Installing collected packages: omero-certificates
14:08:02 Successfully installed omero-certificates-0.4.0
14:08:02 + for x in *.tar.gz
14:08:02 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
14:08:02 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
14:08:02 Installing build dependencies: started
14:08:03 Installing build dependencies: finished with status 'done'
14:08:03 Getting requirements to build wheel: started
14:08:04 Getting requirements to build wheel: finished with status 'done'
14:08:04 Preparing metadata (pyproject.toml): started
14:08:04 Preparing metadata (pyproject.toml): finished with status 'done'
14:08:04 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.22.1)
14:08:04 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
14:08:04 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
14:08:04 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.4)
14:08:04 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.2.0)
14:08:04 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
14:08:04 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
14:08:04 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.33.1)
14:08:04 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
14:08:04 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.7)
14:08:04 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
14:08:04 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
14:08:04 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.2.25)
14:08:04 Building wheels for collected packages: omero-dropbox
14:08:04 Building wheel for omero-dropbox (pyproject.toml): started
14:08:04 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
14:08:04 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49154 sha256=945e32fd381c8a9673423116cb03b4bbd4d132a90edf13fe56bc8d6828f71f1a
14:08:04 Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
14:08:04 Successfully built omero-dropbox
14:08:04 Installing collected packages: omero-dropbox
14:08:04 Successfully installed omero-dropbox-5.7.1.dev0
14:08:04 + for x in *.tar.gz
14:08:04 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
14:08:05 Processing ./omero_marshal-0.9.2.dev0.tar.gz
14:08:05 Installing build dependencies: started
14:08:05 Installing build dependencies: finished with status 'done'
14:08:05 Getting requirements to build wheel: started
14:08:06 Getting requirements to build wheel: finished with status 'done'
14:08:06 Preparing metadata (pyproject.toml): started
14:08:06 Preparing metadata (pyproject.toml): finished with status 'done'
14:08:06 Building wheels for collected packages: omero_marshal
14:08:06 Building wheel for omero_marshal (pyproject.toml): started
14:08:06 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
14:08:06 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88131 sha256=9fb5fe68abfd42103b6706b18b461d38f0d5fe471ce2ddc194cfab0c6f80e296
14:08:06 Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
14:08:06 Successfully built omero_marshal
14:08:06 Installing collected packages: omero_marshal
14:08:06 Successfully installed omero_marshal-0.9.2.dev0
14:08:06 + for x in *.tar.gz
14:08:06 + pip install -U omero_py-5.22.2.dev0.tar.gz
14:08:07 Processing ./omero_py-5.22.2.dev0.tar.gz
14:08:07 Installing build dependencies: started
14:08:08 Installing build dependencies: finished with status 'done'
14:08:08 Getting requirements to build wheel: started
14:08:08 Getting requirements to build wheel: finished with status 'done'
14:08:08 Preparing metadata (pyproject.toml): started
14:08:08 Preparing metadata (pyproject.toml): finished with status 'done'
14:08:08 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
14:08:08 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
14:08:08 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.4)
14:08:08 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.2.0)
14:08:08 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
14:08:08 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
14:08:08 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.33.1)
14:08:08 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
14:08:08 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.7)
14:08:08 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.11)
14:08:08 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.6.3)
14:08:08 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.2.25)
14:08:08 Building wheels for collected packages: omero-py
14:08:08 Building wheel for omero-py (pyproject.toml): started
14:08:09 Building wheel for omero-py (pyproject.toml): finished with status 'done'
14:08:09 Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2786692 sha256=5334aa456e9eaa687c39f44396f46dd9785b9c73a9933a218d92fb8f301e9fea
14:08:09 Stored in directory: /home/omero/.cache/pip/wheels/ec/3f/72/4027ca0a7faf1f66d4577cc07619b0497ac8e99396d43dd8fa
14:08:09 Successfully built omero-py
14:08:10 Installing collected packages: omero-py
14:08:10 Attempting uninstall: omero-py
14:08:10 Found existing installation: omero-py 5.22.1
14:08:10 Uninstalling omero-py-5.22.1:
14:08:10 Successfully uninstalled omero-py-5.22.1
14:08:13 Successfully installed omero-py-5.22.2.dev0
14:08:13 + for x in *.tar.gz
14:08:13 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
14:08:13 Processing ./omero_scripts-5.10.1.dev0.tar.gz
14:08:13 Installing build dependencies: started
14:08:14 Installing build dependencies: finished with status 'done'
14:08:14 Getting requirements to build wheel: started
14:08:14 Getting requirements to build wheel: finished with status 'done'
14:08:14 Preparing metadata (pyproject.toml): started
14:08:15 Preparing metadata (pyproject.toml): finished with status 'done'
14:08:15 Building wheels for collected packages: omero-scripts
14:08:15 Building wheel for omero-scripts (pyproject.toml): started
14:08:15 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
14:08:15 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137001 sha256=ab42dde14bf63ecfb0e50e88f10794ac51dd9f38e2f449fdcf1a1a0b01f32e30
14:08:15 Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
14:08:15 Successfully built omero-scripts
14:08:15 Installing collected packages: omero-scripts
14:08:15 Successfully installed omero-scripts-5.10.1.dev0
14:08:15 + for x in *.tar.gz
14:08:15 + pip install -U omero_web-5.31.1.dev0.tar.gz
14:08:15 Processing ./omero_web-5.31.1.dev0.tar.gz
14:08:16 Installing build dependencies: started
14:08:16 Installing build dependencies: finished with status 'done'
14:08:16 Getting requirements to build wheel: started
14:08:17 Getting requirements to build wheel: finished with status 'done'
14:08:17 Preparing metadata (pyproject.toml): started
14:08:17 Preparing metadata (pyproject.toml): finished with status 'done'
14:08:17 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (5.22.2.dev0)
14:08:17 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.31.1.dev0)
14:08:17 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
14:08:17 Collecting Django<5.3,>=5.2.9 (from omero-web==5.31.1.dev0)
14:08:17 Using cached django-5.2.13-py3-none-any.whl.metadata (4.1 kB)
14:08:17 Collecting django-pipeline>=4.1.0 (from omero-web==5.31.1.dev0)
14:08:17 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
14:08:17 Collecting django-cors-headers==3.7.0 (from omero-web==5.31.1.dev0)
14:08:17 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
14:08:17 Collecting whitenoise>=5.3.0 (from omero-web==5.31.1.dev0)
14:08:17 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
14:08:17 Collecting gunicorn>=19.3 (from omero-web==5.31.1.dev0)
14:08:17 Using cached gunicorn-25.3.0-py3-none-any.whl.metadata (5.5 kB)
14:08:17 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (0.9.2.dev0)
14:08:17 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (12.2.0)
14:08:18 Collecting pytz (from omero-web==5.31.1.dev0)
14:08:18 Using cached pytz-2026.1.post1-py2.py3-none-any.whl.metadata (22 kB)
14:08:18 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (3.2.0)
14:08:18 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (26.0)
14:08:18 Collecting importlib-resources (from omero-web==5.31.1.dev0)
14:08:18 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
14:08:18 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
14:08:18 Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
14:08:18 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
14:08:18 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
14:08:18 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0) (65.5.1)
14:08:18 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0)
14:08:18 Using cached wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)
14:08:18 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.4.4)
14:08:18 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.0.0)
14:08:18 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.4.4)
14:08:18 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (6.0.3)
14:08:18 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.6.5)
14:08:18 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.33.1)
14:08:18 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.4.7)
14:08:18 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.11)
14:08:18 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.6.3)
14:08:18 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2026.2.25)
14:08:18 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
14:08:18 Using cached django-5.2.13-py3-none-any.whl (8.3 MB)
14:08:18 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
14:08:18 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
14:08:18 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
14:08:18 Using cached gunicorn-25.3.0-py3-none-any.whl (208 kB)
14:08:18 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
14:08:18 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
14:08:18 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
14:08:18 Using cached pytz-2026.1.post1-py2.py3-none-any.whl (510 kB)
14:08:18 Using cached wheel-0.46.3-py3-none-any.whl (30 kB)
14:08:18 Building wheels for collected packages: omero-web
14:08:18 Building wheel for omero-web (pyproject.toml): started
14:08:19 Building wheel for omero-web (pyproject.toml): finished with status 'done'
14:08:19 Created wheel for omero-web: filename=omero_web-5.31.1.dev0-py3-none-any.whl size=2819315 sha256=dbc3867550f76abc7e2b2741675039ca5ea0b468562874868f538ea24b4708d1
14:08:19 Stored in directory: /home/omero/.cache/pip/wheels/48/a3/5b/968853abf49b64e1726fdb37874d77f08ddad2d06b53de06b3
14:08:19 Successfully built omero-web
14:08:19 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
14:08:22
14:08:22 Successfully installed Django-5.2.13 asgiref-3.11.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-25.3.0 importlib-resources-6.5.2 omero-web-5.31.1.dev0 pytz-2026.1.post1 sqlparse-0.5.5 wheel-0.46.3 whitenoise-6.12.0
14:08:22 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
14:08:22 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
14:08:22 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
14:08:22 --2026-04-09 14:08:22-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
14:08:22 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.109.133, 185.199.110.133, 185.199.108.133, ...
14:08:22 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.109.133|:443... connected.
14:08:22 HTTP request sent, awaiting response... 200 OK
14:08:22 Length: 139338 (136K) [text/plain]
14:08:22 Saving to: ‘Figure_To_Pdf.py’
14:08:22
14:08:22 0K .......... .......... .......... .......... .......... 36% 2.69M 0s
14:08:22 50K .......... .......... .......... .......... .......... 73% 8.55M 0s
14:08:22 100K .......... .......... .......... ...... 100% 4.40M=0.03s
14:08:22
14:08:22 2026-04-09 14:08:22 (4.17 MB/s) - ‘Figure_To_Pdf.py’ saved [139338/139338]
14:08:22
14:08:22 + chmod 755 Figure_To_Pdf.py
14:08:22 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
14:08:22 + omero config set omero.db.name OMERO-server
14:08:24 + omero config set omero.db.host pg
14:08:26 + omero config set omero.db.user postgres
14:08:28 + omero config set omero.data.dir /home/omero/omero-server-data
14:08:30 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
14:08:32 + omero config set omero.db.poolsize 25
14:08:34 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
14:08:36 + omero config set omero.security.trustStorePassword changeit
14:08:38 + omero config set omero.mail.config true
14:08:40 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
14:08:42 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED'
14:08:44 + omero certificates
14:08:46 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
14:08:46 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
14:08:46 + '[' false = true ']'
14:08:46 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
14:08:46 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
14:08:46 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG dbcommand => upgrade
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG dbhost => localhost
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG dbname => OMERO-server
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG dbpass => omero
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG dbuser => omero
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG rootpass => omero
14:08:46 2026-04-09 14:08:46,857 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
14:08:46 2026-04-09 14:08:46,857 [omego.extern] INFO Executing : omero version
14:08:48 OMERO.py version:
14:08:48 OMERO.server version:
14:08:48 5.6.3-596-a4374e94f1-ice36-b104
14:08:48 5.22.2.dev0
14:08:48 2026-04-09 14:08:48,874 [omego.extern] INFO Completed [2.017 s]
14:08:48 2026-04-09 14:08:48,874 [omego.extern] DEBUG Using omero CLI from omero
14:08:48 2026-04-09 14:08:48,874 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
14:08:48 2026-04-09 14:08:48,874 [omego.extern] INFO Running [current environment]: omero config get --show-password
14:08:48 2026-04-09 14:08:48,874 [omego.extern] INFO Executing : omero config get --show-password
14:08:50 2026-04-09 14:08:50,842 [omego.extern] INFO Completed [1.968 s]
14:08:50 2026-04-09 14:08:50,842 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
14:08:50 2026-04-09 14:08:50,843 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
14:08:50 2026-04-09 14:08:50,848 [omego.extern] INFO Completed [0.005 s]
14:08:50 2026-04-09 14:08:50,848 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
14:08:50 2026-04-09 14:08:50,848 [ omego.db] INFO psql version: psql (PostgreSQL) 16.11
14:08:50
14:08:50 2026-04-09 14:08:50,848 [omego.extern] INFO Running [current environment]: omero config get --show-password
14:08:50 2026-04-09 14:08:50,848 [omego.extern] INFO Executing : omero config get --show-password
14:08:52 2026-04-09 14:08:52,806 [omego.extern] INFO Completed [1.958 s]
14:08:52 2026-04-09 14:08:52,807 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
14:08:52 2026-04-09 14:08:52,807 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
14:08:52 2026-04-09 14:08:52,815 [omego.extern] INFO Completed [0.009 s]
14:08:52 2026-04-09 14:08:52,815 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.3") at port "5432".\n'
14:08:52 2026-04-09 14:08:52,815 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
14:08:52 2026-04-09 14:08:52,815 [omego.extern] INFO Running [current environment]: omero config get --show-password
14:08:52 2026-04-09 14:08:52,815 [omego.extern] INFO Executing : omero config get --show-password
14:08:54 2026-04-09 14:08:54,868 [omego.extern] INFO Completed [2.053 s]
14:08:54 2026-04-09 14:08:54,868 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
14:08:54 2026-04-09 14:08:54,869 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
14:08:54 2026-04-09 14:08:54,878 [omego.extern] INFO Completed [0.010 s]
14:08:54 2026-04-09 14:08:54,878 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
14:08:54 2026-04-09 14:08:54,879 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
14:08:54 2026-04-09 14:08:54,880 [ omego.db] INFO Database is already at OMERO5.4__0
14:08:54 + export LANG=en_US.UTF-8
14:08:54 + LANG=en_US.UTF-8
14:08:54 + export LANGUAGE=en_US:en
14:08:54 + LANGUAGE=en_US:en
14:08:54 + export LC_ALL=en_US.UTF-8
14:08:54 + LC_ALL=en_US.UTF-8
14:08:54 + BUILD_ID=DONT_KILL_ME
14:08:54 + omero admin start
14:08:59 No descriptor given. Using etc/grid/default.xml
14:09:07 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
14:09:07 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
14:09:07 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
14:09:07 Waiting on startup. Use CTRL-C to exit
14:09:07 + omero admin waitup
14:09:09 Waiting on startup. Use CTRL-C to exit
14:09:09 + omero admin diagnostics
14:09:11
14:09:11 ================================================================================
14:09:11 OMERO Diagnostics (admin)
14:09:11 ================================================================================
14:09:11
14:09:11 Commands: java -version 17.0.17 (/usr/bin/java)
14:09:11 Commands: python -V 3.11.13 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
14:09:11 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
14:09:11 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
14:09:11 Commands: psql --version 16.11 (/usr/bin/psql)
14:09:11 Commands: openssl version 3.5.11 (/usr/bin/openssl)
14:09:11
14:09:11 Component: OMERO.py 5.22.2.dev0
14:09:11 Component: OMERO.server 5.6.3-596-a4374e94f1-ice36-b104
14:09:11
14:09:11 Server: icegridnode running
14:09:11 Server: Blitz-0 active (pid = 17709, enabled)
14:09:11 Server: Indexer-0 activating (enabled)
14:09:11 Server: OMERO.Glacier2 active (pid = 17742, enabled)
14:09:11 Server: OMERO.IceStorm active (pid = 17770, enabled)
14:09:11 Server: Processor-0 active (pid = 17759, enabled)
14:09:11 Server: Tables-0 active (pid = 17771, enabled)
14:09:11
14:09:11 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
14:09:11 Log files: Blitz-0.log 32.2 KB errors=0 warnings=1
14:09:11 Log files: DropBox.log n/a
14:09:11 Log files: FileServer.log n/a
14:09:11 Log files: Indexer-0.log 238 B
14:09:11 Log files: MonitorServer.log n/a
14:09:11 Log files: Processor-0.log 735 B
14:09:11 Log files: Tables-0.log 961 B
14:09:11 Log files: TestDropBox.log n/a
14:09:11 Log files: master.err empty
14:09:11 Log files: master.out 30.5 KB
14:09:11 Log files: Total size 0.06 MB
14:09:11
14:09:11
14:09:11 Environment:OMERO_HOME=(unset)
14:09:11 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:09:11 Environment:OMERO_NODE=(unset)
14:09:11 Environment:OMERO_MASTER=(unset)
14:09:11 Environment:OMERO_USERDIR=(unset)
14:09:11 Environment:OMERO_TMPDIR=(unset)
14:09:11 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:09:11 Environment:PYTHONPATH=(unset)
14:09:11 Environment:ICE_HOME=/opt/ice-3.6.5
14:09:11 Environment:LD_LIBRARY_PATH=(unset)
14:09:11 Environment:DYLD_LIBRARY_PATH=(unset)
14:09:11
14:09:11 OMERO SSL port:4064
14:09:11 OMERO TCP port:4063
14:09:11 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
14:09:11 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
14:09:11
14:09:11 JVM settings: Blitz-${index} -Xmx7200m
14:09:11 JVM settings: Indexer-${index} -Xmx4800m
14:09:11 JVM settings: PixelData-${index} -Xmx7200m
14:09:11 JVM settings: Repository-${index} -Xmx4800m
14:09:11
14:09:11 Jar: lib/server/formats-api.jar Bio-Formats API 8.6.0-SNAPSHOT 9 April 2026 d745eb8f2669e42e91c327f7ffc73fc229ed4b4c
14:09:11 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.6.0-SNAPSHOT 9 April 2026 d745eb8f2669e42e91c327f7ffc73fc229ed4b4c
14:09:11 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.6.0-SNAPSHOT 9 April 2026 d745eb8f2669e42e91c327f7ffc73fc229ed4b4c
14:09:11 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.4-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/ome-common.jar OME Common Java 6.2.2-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/ome-jai.jar OME JAI 0.1.6-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.5-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/ome-poi.jar OME POI 5.3.11-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/ome-xml.jar OME XML library 6.5.4-SNAPSHOT 9 April 2026 25a672860ecb5b48de662cee0562d9410e255e3b
14:09:11 Jar: lib/server/omero-blitz.jar jar 5.8.5-SNAPSHOT
14:09:11 Jar: lib/server/omero-common.jar jar 5.7.6-SNAPSHOT
14:09:11 Jar: lib/server/omero-gateway.jar jar 5.10.6-SNAPSHOT
14:09:11 Jar: lib/server/omero-model.jar jar 5.7.6-SNAPSHOT
14:09:11 Jar: lib/server/omero-renderer.jar jar 5.6.5-SNAPSHOT
14:09:11 Jar: lib/server/omero-romio.jar jar 5.8.6-SNAPSHOT
14:09:11 Jar: lib/server/omero-server.jar jar 5.7.5-SNAPSHOT
14:09:11 Jar: lib/server/omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar OMERO Zarr Pixel Buffer 0.6.2-SNAPSHOT f25875b156d29ab63ae8f405ea2feca4363da278
14:09:12 + deactivate
14:09:12 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
14:09:12 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:09:12 + export PATH
14:09:12 + unset _OLD_VIRTUAL_PATH
14:09:12 + '[' -n '' ']'
14:09:12 + hash -r
14:09:12 + '[' -n '' ']'
14:09:12 + unset VIRTUAL_ENV
14:09:12 + unset VIRTUAL_ENV_PROMPT
14:09:12 + '[' '!' '' = nondestructive ']'
14:09:12 + unset -f deactivate
14:09:12 Finished: SUCCESS
