00:43:59 Started by upstream project "Trigger" build number 99
00:43:59 originally caused by:
00:43:59 Started by timer
00:43:59 Running as SYSTEM
00:43:59 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
00:43:59 [OMERO-server] $ /bin/bash -xe /tmp/jenkins13958440481341061705.sh
00:43:59 + source /home/settings.env
00:43:59 ++ OMERO_DB_HOST=pg
00:43:59 ++ OMERO_DB_USER=postgres
00:43:59 ++ OMERO_DB_PASS=
00:43:59 ++ OMERO_ROOT_PASS=omero
00:43:59 ++ OMERO_DATA_DIR=/OMERO
00:43:59 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:43:59 + OMERO_DB_NAME=OMERO-server
00:43:59 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:43:59 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:43:59 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:43:59 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:43:59 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
00:43:59 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:43:59 ++ deactivate nondestructive
00:43:59 ++ '[' -n '' ']'
00:43:59 ++ '[' -n '' ']'
00:43:59 ++ hash -r
00:43:59 ++ '[' -n '' ']'
00:43:59 ++ unset VIRTUAL_ENV
00:43:59 ++ unset VIRTUAL_ENV_PROMPT
00:43:59 ++ '[' '!' nondestructive = nondestructive ']'
00:43:59 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:43:59 ++ export VIRTUAL_ENV
00:43:59 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:43:59 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:43:59 ++ export PATH
00:43:59 ++ '[' -n '' ']'
00:43:59 ++ '[' -z '' ']'
00:43:59 ++ _OLD_VIRTUAL_PS1=
00:43:59 ++ PS1='(.venv3) '
00:43:59 ++ export PS1
00:43:59 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:43:59 ++ export VIRTUAL_ENV_PROMPT
00:43:59 ++ hash -r
00:43:59 + omero admin stop
00:44:01 Waiting on shutdown. Use CTRL-C to exit
00:44:01 .+ sleep 5
00:44:16 + deactivate
00:44:16 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:44:16 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:44:16 + export PATH
00:44:16 + unset _OLD_VIRTUAL_PATH
00:44:16 + '[' -n '' ']'
00:44:16 + hash -r
00:44:16 + '[' -n '' ']'
00:44:16 + unset VIRTUAL_ENV
00:44:16 + unset VIRTUAL_ENV_PROMPT
00:44:16 + '[' '!' '' = nondestructive ']'
00:44:16 + unset -f deactivate
00:44:16 + rm -rf /home/omero/workspace/OMERO-server/.venv3
00:44:17 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
00:44:20 + '[' false = true ']'
00:44:20 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
00:44:20 Skipping PURGE_DATA:CleanDbAndRepo
00:44:20 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.5-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.31.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
00:44:22 Copied 1 artifact from "OMERO-build" build number 75
00:44:22 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 71
00:44:22 Copied 2 artifacts from "OMERO-build-build" build number 75
00:44:22 Copied 1 artifact from "OMERO-zarr-pixel-buffer-build" build number 69
00:44:22 [OMERO-server] $ /bin/bash -xe /tmp/jenkins14492146084619871216.sh
00:44:22 + source /home/settings.env
00:44:22 ++ OMERO_DB_HOST=pg
00:44:22 ++ OMERO_DB_USER=postgres
00:44:22 ++ OMERO_DB_PASS=
00:44:22 ++ OMERO_ROOT_PASS=omero
00:44:22 ++ OMERO_DATA_DIR=/OMERO
00:44:22 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
00:44:22 + OMERO_DB_NAME=OMERO-server
00:44:22 + OMERO_DATA_DIR=/home/omero/omero-server-data
00:44:22 + mkdir -p /home/omero/omero-server-data
00:44:22 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
00:44:22 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:44:22 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:44:22 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:44:22 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
00:44:22 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:44:22 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
00:44:22 ++ ls OMERO.server-5.6.3-594-e419881d2e-ice36-b75.zip
00:44:22 + ZIP=OMERO.server-5.6.3-594-e419881d2e-ice36-b75.zip
00:44:22 + '[' '!' -z '' ']'
00:44:22 + DIST=OMERO.server-5.6.3-594-e419881d2e-ice36-b75
00:44:22 + unzip OMERO.server-5.6.3-594-e419881d2e-ice36-b75.zip
00:44:22 Archive: OMERO.server-5.6.3-594-e419881d2e-ice36-b75.zip
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/blitz/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/grid/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/profiles/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/error/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/grid/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/janelia/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/matplotlib/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/ncsa_paledit/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/seaborn/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/luts/wcif/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/analysis_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/annotation_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/export_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/figure_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/import_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/scripts/omero/util_scripts/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/server/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/share/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/share/licenses/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/misc/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__1/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__10/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__11/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__2/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__3/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__4/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__5/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__6/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__7/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__8/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3A__9/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3__4/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3__5/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3__6/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO3__7/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4.1__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4.2__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4.2__0/t/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4.3__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4.4__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO4__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.0__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.1__1/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.2__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__1/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__2/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__3/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/var/
00:44:22 creating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/var/tmp/
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/LICENSE.txt
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/backup.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/blitz/mail-senders.example
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/blitz/mail-server.example
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/build.properties
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/env.bat
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/env.sh
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/hibernate.properties
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/ice.config
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/logback-cli.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/logback-indexing-cli.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/logback-indexing.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/logback.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/mime.types
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/node1.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/node2.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/omero.properties
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/profiles/psql
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/rollover.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/Windows.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/error/maintainance.html
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/grid/README
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/grid/default.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/grid/templates.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/grid/windefault.xml
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/ice.config
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/internal.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/master.cfg
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/templates/robot.template
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/etc/testdropbox.config
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/history.rst
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/OMEZarrReader.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/accessors-smart.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/activation.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aggdesigner-algorithm.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aircompressor.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/antlr.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aopalliance.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/apiguardian-api.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/asm.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/avatica-core.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/avatica-metrics.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aws-java-sdk-core.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aws-java-sdk-kms.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/aws-java-sdk-s3.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/base.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-anim.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-awt-util.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-bridge.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-codec.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-constants.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-css.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-dom.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-ext.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-gvt.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-i18n.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-parser.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-script.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-shared-resources.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-svg-dom.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-svggen.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-transcoder.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-util.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/batik-xml.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/btm.jar
00:44:22 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/lib/client/calcite-core.jar
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00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/psql-footer.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/psql-header.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/schema.sql
00:44:25 inflating: OMERO.server-5.6.3-594-e419881d2e-ice36-b75/sql/psql/OMERO5.4__0/views.sql
00:44:25 + rm -f OMERO.server-5.6.3-594-e419881d2e-ice36-b75.zip
00:44:25 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-594-e419881d2e-ice36-b75 /home/omero/workspace/OMERO-server/OMERO.server
00:44:25 + jacksonVersion=2.20.0
00:44:25 + awsSdkVersion=2.34.6
00:44:25 + reactiveStreamsVersion=1.0.4
00:44:25 + zarrJavaVersion=0.1.0
00:44:25 + rm -f '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/omero-zarr-pixel-buffer*.jar' '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/jzarr.jar '/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3fs*.jar' /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-core.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-kms.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-java-sdk-s3.jar
00:44:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:44:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:25 --2026-03-09 00:44:25-- https://repo.maven.apache.org/maven2/com/github/ben-manes/caffeine/caffeine/3.1.8/caffeine-3.1.8.jar
00:44:25 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:25 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:44:25 HTTP request sent, awaiting response... 200 OK
00:44:25 Length: 889211 (868K) [application/java-archive]
00:44:25 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’
00:44:25
00:44:25 0K .......... .......... .......... .......... .......... 5% 30.7M 0s
00:44:25 50K .......... .......... .......... .......... .......... 11% 5.44M 0s
00:44:25 100K .......... .......... .......... .......... .......... 17% 6.59M 0s
00:44:25 150K .......... .......... .......... .......... .......... 23% 24.4M 0s
00:44:25 200K .......... .......... .......... .......... .......... 28% 24.4M 0s
00:44:25 250K .......... .......... .......... .......... .......... 34% 16.7M 0s
00:44:25 300K .......... .......... .......... .......... .......... 40% 27.6M 0s
00:44:25 350K .......... .......... .......... .......... .......... 46% 38.9M 0s
00:44:25 400K .......... .......... .......... .......... .......... 51% 24.5M 0s
00:44:25 450K .......... .......... .......... .......... .......... 57% 41.3M 0s
00:44:25 500K .......... .......... .......... .......... .......... 63% 16.7M 0s
00:44:25 550K .......... .......... .......... .......... .......... 69% 30.9M 0s
00:44:25 600K .......... .......... .......... .......... .......... 74% 33.2M 0s
00:44:25 650K .......... .......... .......... .......... .......... 80% 15.1M 0s
00:44:25 700K .......... .......... .......... .......... .......... 86% 162M 0s
00:44:25 750K .......... .......... .......... .......... .......... 92% 12.2M 0s
00:44:25 800K .......... .......... .......... .......... .......... 97% 187M 0s
00:44:25 850K .......... ........ 100% 236M=0.04s
00:44:25
00:44:25 2026-03-09 00:44:25 (18.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/caffeine-3.1.8.jar’ saved [889211/889211]
00:44:25
00:44:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
00:44:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:25 --2026-03-09 00:44:25-- https://repo.maven.apache.org/maven2/dev/zarr/zarr-java/0.1.0/zarr-java-0.1.0.jar
00:44:25 Resolving repo.maven.apache.org (repo.maven.apache.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:25 Connecting to repo.maven.apache.org (repo.maven.apache.org)|104.18.18.12|:443... connected.
00:44:25 HTTP request sent, awaiting response... 200 OK
00:44:25 Length: 183560 (179K) [application/java-archive]
00:44:25 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’
00:44:25
00:44:25 0K .......... .......... .......... .......... .......... 27% 30.4M 0s
00:44:25 50K .......... .......... .......... .......... .......... 55% 5.60M 0s
00:44:25 100K .......... .......... .......... .......... .......... 83% 6.61M 0s
00:44:25 150K .......... .......... ......... 100% 25.3M=0.02s
00:44:25
00:44:25 2026-03-09 00:44:25 (9.29 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/zarr-java-0.1.0.jar’ saved [183560/183560]
00:44:25
00:44:25 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:44:25 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:25 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:25 --2026-03-09 00:44:25-- https://repo1.maven.org/maven2/com/scalableminds/blosc-java/0.1-1.21.4/blosc-java-0.1-1.21.4.jar
00:44:25 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:25 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:26 HTTP request sent, awaiting response... 200 OK
00:44:26 Length: 1732435 (1.7M) [application/java-archive]
00:44:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’
00:44:26
00:44:26 0K .......... .......... .......... .......... .......... 2% 30.8M 0s
00:44:26 50K .......... .......... .......... .......... .......... 5% 5.65M 0s
00:44:26 100K .......... .......... .......... .......... .......... 8% 16.6M 0s
00:44:26 150K .......... .......... .......... .......... .......... 11% 8.07M 0s
00:44:26 200K .......... .......... .......... .......... .......... 14% 18.0M 0s
00:44:26 250K .......... .......... .......... .......... .......... 17% 25.3M 0s
00:44:26 300K .......... .......... .......... .......... .......... 20% 25.1M 0s
00:44:26 350K .......... .......... .......... .......... .......... 23% 26.3M 0s
00:44:26 400K .......... .......... .......... .......... .......... 26% 55.1M 0s
00:44:26 450K .......... .......... .......... .......... .......... 29% 27.1M 0s
00:44:26 500K .......... .......... .......... .......... .......... 32% 21.2M 0s
00:44:26 550K .......... .......... .......... .......... .......... 35% 41.9M 0s
00:44:26 600K .......... .......... .......... .......... .......... 38% 12.5M 0s
00:44:26 650K .......... .......... .......... .......... .......... 41% 306M 0s
00:44:26 700K .......... .......... .......... .......... .......... 44% 26.8M 0s
00:44:26 750K .......... .......... .......... .......... .......... 47% 27.1M 0s
00:44:26 800K .......... .......... .......... .......... .......... 50% 36.5M 0s
00:44:26 850K .......... .......... .......... .......... .......... 53% 12.8M 0s
00:44:26 900K .......... .......... .......... .......... .......... 56% 89.3M 0s
00:44:26 950K .......... .......... .......... .......... .......... 59% 35.1M 0s
00:44:26 1000K .......... .......... .......... .......... .......... 62% 26.9M 0s
00:44:26 1050K .......... .......... .......... .......... .......... 65% 38.0M 0s
00:44:26 1100K .......... .......... .......... .......... .......... 67% 12.5M 0s
00:44:26 1150K .......... .......... .......... .......... .......... 70% 99.4M 0s
00:44:26 1200K .......... .......... .......... .......... .......... 73% 29.6M 0s
00:44:26 1250K .......... .......... .......... .......... .......... 76% 127M 0s
00:44:26 1300K .......... .......... .......... .......... .......... 79% 19.1M 0s
00:44:26 1350K .......... .......... .......... .......... .......... 82% 11.1M 0s
00:44:26 1400K .......... .......... .......... .......... .......... 85% 240M 0s
00:44:26 1450K .......... .......... .......... .......... .......... 88% 35.9M 0s
00:44:26 1500K .......... .......... .......... .......... .......... 91% 133M 0s
00:44:26 1550K .......... .......... .......... .......... .......... 94% 16.9M 0s
00:44:26 1600K .......... .......... .......... .......... .......... 97% 11.9M 0s
00:44:26 1650K .......... .......... .......... .......... . 100% 90.4M=0.07s
00:44:26
00:44:26 2026-03-09 00:44:26 (22.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/blosc-java-0.1-1.21.4.jar’ saved [1732435/1732435]
00:44:26
00:44:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:44:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:26 --2026-03-09 00:44:26-- https://repo1.maven.org/maven2/com/squareup/okhttp/okhttp/2.7.5/okhttp-2.7.5.jar
00:44:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:26 HTTP request sent, awaiting response... 200 OK
00:44:26 Length: 331034 (323K) [application/java-archive]
00:44:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’
00:44:26
00:44:26 0K .......... .......... .......... .......... .......... 15% 31.2M 0s
00:44:26 50K .......... .......... .......... .......... .......... 30% 5.62M 0s
00:44:26 100K .......... .......... .......... .......... .......... 46% 6.57M 0s
00:44:26 150K .......... .......... .......... .......... .......... 61% 36.5M 0s
00:44:26 200K .......... .......... .......... .......... .......... 77% 19.1M 0s
00:44:26 250K .......... .......... .......... .......... .......... 92% 26.3M 0s
00:44:26 300K .......... .......... ... 100% 22.9M=0.02s
00:44:26
00:44:26 2026-03-09 00:44:26 (12.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/okhttp-2.7.5.jar’ saved [331034/331034]
00:44:26
00:44:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:44:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:26 --2026-03-09 00:44:26-- https://repo1.maven.org/maven2/com/fasterxml/jackson/datatype/jackson-datatype-jdk8/2.20.0/jackson-datatype-jdk8-2.20.0.jar
00:44:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:26 HTTP request sent, awaiting response... 200 OK
00:44:26 Length: 36400 (36K) [application/java-archive]
00:44:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’
00:44:26
00:44:26 0K .......... .......... .......... ..... 100% 31.2M=0.001s
00:44:26
00:44:26 2026-03-09 00:44:26 (31.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/jackson-datatype-jdk8-2.20.0.jar’ saved [36400/36400]
00:44:26
00:44:26 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:44:26 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:26 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:26 --2026-03-09 00:44:26-- https://repo1.maven.org/maven2/software/amazon/awssdk/s3/2.34.6/s3-2.34.6.jar
00:44:26 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:26 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:26 HTTP request sent, awaiting response... 200 OK
00:44:26 Length: 4083366 (3.9M) [application/java-archive]
00:44:26 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’
00:44:26
00:44:26 0K .......... .......... .......... .......... .......... 1% 27.0M 0s
00:44:26 50K .......... .......... .......... .......... .......... 2% 5.73M 0s
00:44:26 100K .......... .......... .......... .......... .......... 3% 6.55M 0s
00:44:26 150K .......... .......... .......... .......... .......... 5% 29.0M 0s
00:44:26 200K .......... .......... .......... .......... .......... 6% 27.4M 0s
00:44:26 250K .......... .......... .......... .......... .......... 7% 17.9M 0s
00:44:26 300K .......... .......... .......... .......... .......... 8% 25.2M 0s
00:44:26 350K .......... .......... .......... .......... .......... 10% 34.1M 0s
00:44:26 400K .......... .......... .......... .......... .......... 11% 24.4M 0s
00:44:26 450K .......... .......... .......... .......... .......... 12% 28.8M 0s
00:44:26 500K .......... .......... .......... .......... .......... 13% 45.6M 0s
00:44:26 550K .......... .......... .......... .......... .......... 15% 14.0M 0s
00:44:26 600K .......... .......... .......... .......... .......... 16% 35.6M 0s
00:44:26 650K .......... .......... .......... .......... .......... 17% 37.9M 0s
00:44:26 700K .......... .......... .......... .......... .......... 18% 30.8M 0s
00:44:26 750K .......... .......... .......... .......... .......... 20% 33.5M 0s
00:44:26 800K .......... .......... .......... .......... .......... 21% 10.9M 0s
00:44:26 850K .......... .......... .......... .......... .......... 22% 127M 0s
00:44:26 900K .......... .......... .......... .......... .......... 23% 45.1M 0s
00:44:26 950K .......... .......... .......... .......... .......... 25% 33.9M 0s
00:44:26 1000K .......... .......... .......... .......... .......... 26% 31.7M 0s
00:44:26 1050K .......... .......... .......... .......... .......... 27% 11.3M 0s
00:44:26 1100K .......... .......... .......... .......... .......... 28% 70.5M 0s
00:44:26 1150K .......... .......... .......... .......... .......... 30% 52.5M 0s
00:44:26 1200K .......... .......... .......... .......... .......... 31% 35.0M 0s
00:44:26 1250K .......... .......... .......... .......... .......... 32% 31.6M 0s
00:44:26 1300K .......... .......... .......... .......... .......... 33% 9.96M 0s
00:44:26 1350K .......... .......... .......... .......... .......... 35% 97.5M 0s
00:44:26 1400K .......... .......... .......... .......... .......... 36% 26.3M 0s
00:44:26 1450K .......... .......... .......... .......... .......... 37% 24.4M 0s
00:44:26 1500K .......... .......... .......... .......... .......... 38% 26.6M 0s
00:44:26 1550K .......... .......... .......... .......... .......... 40% 43.2M 0s
00:44:26 1600K .......... .......... .......... .......... .......... 41% 22.9M 0s
00:44:26 1650K .......... .......... .......... .......... .......... 42% 25.4M 0s
00:44:26 1700K .......... .......... .......... .......... .......... 43% 25.0M 0s
00:44:26 1750K .......... .......... .......... .......... .......... 45% 27.3M 0s
00:44:26 1800K .......... .......... .......... .......... .......... 46% 46.2M 0s
00:44:26 1850K .......... .......... .......... .......... .......... 47% 20.8M 0s
00:44:26 1900K .......... .......... .......... .......... .......... 48% 26.0M 0s
00:44:26 1950K .......... .......... .......... .......... .......... 50% 39.4M 0s
00:44:26 2000K .......... .......... .......... .......... .......... 51% 28.0M 0s
00:44:26 2050K .......... .......... .......... .......... .......... 52% 25.4M 0s
00:44:26 2100K .......... .......... .......... .......... .......... 53% 24.1M 0s
00:44:26 2150K .......... .......... .......... .......... .......... 55% 40.0M 0s
00:44:26 2200K .......... .......... .......... .......... .......... 56% 24.9M 0s
00:44:26 2250K .......... .......... .......... .......... .......... 57% 27.7M 0s
00:44:26 2300K .......... .......... .......... .......... .......... 58% 24.9M 0s
00:44:26 2350K .......... .......... .......... .......... .......... 60% 24.0M 0s
00:44:26 2400K .......... .......... .......... .......... .......... 61% 39.8M 0s
00:44:26 2450K .......... .......... .......... .......... .......... 62% 25.4M 0s
00:44:26 2500K .......... .......... .......... .......... .......... 63% 18.4M 0s
00:44:27 2550K .......... .......... .......... .......... .......... 65% 43.3M 0s
00:44:27 2600K .......... .......... .......... .......... .......... 66% 23.4M 0s
00:44:27 2650K .......... .......... .......... .......... .......... 67% 25.6M 0s
00:44:27 2700K .......... .......... .......... .......... .......... 68% 25.8M 0s
00:44:27 2750K .......... .......... .......... .......... .......... 70% 24.7M 0s
00:44:27 2800K .......... .......... .......... .......... .......... 71% 45.5M 0s
00:44:27 2850K .......... .......... .......... .......... .......... 72% 23.0M 0s
00:44:27 2900K .......... .......... .......... .......... .......... 73% 26.9M 0s
00:44:27 2950K .......... .......... .......... .......... .......... 75% 25.8M 0s
00:44:27 3000K .......... .......... .......... .......... .......... 76% 84.8M 0s
00:44:27 3050K .......... .......... .......... .......... .......... 77% 19.1M 0s
00:44:27 3100K .......... .......... .......... .......... .......... 78% 22.9M 0s
00:44:27 3150K .......... .......... .......... .......... .......... 80% 27.4M 0s
00:44:27 3200K .......... .......... .......... .......... .......... 81% 26.2M 0s
00:44:27 3250K .......... .......... .......... .......... .......... 82% 94.1M 0s
00:44:27 3300K .......... .......... .......... .......... .......... 84% 18.9M 0s
00:44:27 3350K .......... .......... .......... .......... .......... 85% 23.4M 0s
00:44:27 3400K .......... .......... .......... .......... .......... 86% 27.5M 0s
00:44:27 3450K .......... .......... .......... .......... .......... 87% 23.8M 0s
00:44:27 3500K .......... .......... .......... .......... .......... 89% 24.2M 0s
00:44:27 3550K .......... .......... .......... .......... .......... 90% 36.4M 0s
00:44:27 3600K .......... .......... .......... .......... .......... 91% 28.4M 0s
00:44:27 3650K .......... .......... .......... .......... .......... 92% 22.5M 0s
00:44:27 3700K .......... .......... .......... .......... .......... 94% 28.1M 0s
00:44:27 3750K .......... .......... .......... .......... .......... 95% 18.2M 0s
00:44:27 3800K .......... .......... .......... .......... .......... 96% 83.4M 0s
00:44:27 3850K .......... .......... .......... .......... .......... 97% 26.2M 0s
00:44:27 3900K .......... .......... .......... .......... .......... 99% 17.8M 0s
00:44:27 3950K .......... .......... .......... ....... 100% 33.1M=0.2s
00:44:27
00:44:27 2026-03-09 00:44:27 (24.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/s3-2.34.6.jar’ saved [4083366/4083366]
00:44:27
00:44:27 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:44:27 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:27 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:27 --2026-03-09 00:44:27-- https://repo1.maven.org/maven2/software/amazon/awssdk/auth/2.34.6/auth-2.34.6.jar
00:44:27 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:27 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:27 HTTP request sent, awaiting response... 200 OK
00:44:27 Length: 234962 (229K) [application/java-archive]
00:44:27 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’
00:44:27
00:44:27 0K .......... .......... .......... .......... .......... 21% 27.6M 0s
00:44:27 50K .......... .......... .......... .......... .......... 43% 5.56M 0s
00:44:27 100K .......... .......... .......... .......... .......... 65% 6.70M 0s
00:44:27 150K .......... .......... .......... .......... .......... 87% 27.0M 0s
00:44:27 200K .......... .......... ......... 100% 27.8M=0.02s
00:44:27
00:44:27 2026-03-09 00:44:27 (10.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/auth-2.34.6.jar’ saved [234962/234962]
00:44:27
00:44:27 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:44:27 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:27 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:27 --2026-03-09 00:44:27-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-core/2.34.6/aws-core-2.34.6.jar
00:44:27 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:27 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:27 HTTP request sent, awaiting response... 200 OK
00:44:27 Length: 192161 (188K) [application/java-archive]
00:44:27 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’
00:44:27
00:44:27 0K .......... .......... .......... .......... .......... 26% 27.4M 0s
00:44:27 50K .......... .......... .......... .......... .......... 53% 5.86M 0s
00:44:27 100K .......... .......... .......... .......... .......... 79% 27.4M 0s
00:44:27 150K .......... .......... .......... ....... 100% 5.22M=0.02s
00:44:27
00:44:27 2026-03-09 00:44:27 (9.68 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-core-2.34.6.jar’ saved [192161/192161]
00:44:27
00:44:27 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:44:27 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:27 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:27 --2026-03-09 00:44:27-- https://repo1.maven.org/maven2/software/amazon/awssdk/sdk-core/2.34.6/sdk-core-2.34.6.jar
00:44:27 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:27 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:27 HTTP request sent, awaiting response... 200 OK
00:44:27 Length: 1037104 (1013K) [application/java-archive]
00:44:27 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’
00:44:27
00:44:27 0K .......... .......... .......... .......... .......... 4% 23.3M 0s
00:44:27 50K .......... .......... .......... .......... .......... 9% 5.43M 0s
00:44:27 100K .......... .......... .......... .......... .......... 14% 6.36M 0s
00:44:27 150K .......... .......... .......... .......... .......... 19% 24.7M 0s
00:44:27 200K .......... .......... .......... .......... .......... 24% 20.0M 0s
00:44:27 250K .......... .......... .......... .......... .......... 29% 25.6M 0s
00:44:27 300K .......... .......... .......... .......... .......... 34% 15.4M 0s
00:44:27 350K .......... .......... .......... .......... .......... 39% 26.0M 0s
00:44:27 400K .......... .......... .......... .......... .......... 44% 30.7M 0s
00:44:27 450K .......... .......... .......... .......... .......... 49% 32.0M 0s
00:44:27 500K .......... .......... .......... .......... .......... 54% 42.5M 0s
00:44:27 550K .......... .......... .......... .......... .......... 59% 16.7M 0s
00:44:27 600K .......... .......... .......... .......... .......... 64% 26.5M 0s
00:44:27 650K .......... .......... .......... .......... .......... 69% 28.0M 0s
00:44:27 700K .......... .......... .......... .......... .......... 74% 19.7M 0s
00:44:27 750K .......... .......... .......... .......... .......... 78% 118M 0s
00:44:27 800K .......... .......... .......... .......... .......... 83% 14.9M 0s
00:44:27 850K .......... .......... .......... .......... .......... 88% 42.7M 0s
00:44:27 900K .......... .......... .......... .......... .......... 93% 16.5M 0s
00:44:27 950K .......... .......... .......... .......... .......... 98% 39.4M 0s
00:44:27 1000K .......... .. 100% 377M=0.05s
00:44:27
00:44:27 2026-03-09 00:44:27 (18.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/sdk-core-2.34.6.jar’ saved [1037104/1037104]
00:44:27
00:44:27 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:44:27 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:27 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:27 --2026-03-09 00:44:27-- https://repo1.maven.org/maven2/software/amazon/awssdk/annotations/2.34.6/annotations-2.34.6.jar
00:44:28 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:28 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:28 HTTP request sent, awaiting response... 200 OK
00:44:28 Length: 13758 (13K) [application/java-archive]
00:44:28 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’
00:44:28
00:44:28 0K .......... ... 100% 21.7M=0.001s
00:44:28
00:44:28 2026-03-09 00:44:28 (21.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/annotations-2.34.6.jar’ saved [13758/13758]
00:44:28
00:44:28 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:44:28 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:28 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:28 --2026-03-09 00:44:28-- https://repo1.maven.org/maven2/software/amazon/awssdk/regions/2.34.6/regions-2.34.6.jar
00:44:28 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:28 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:28 HTTP request sent, awaiting response... 200 OK
00:44:28 Length: 962220 (940K) [application/java-archive]
00:44:28 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’
00:44:28
00:44:28 0K .......... .......... .......... .......... .......... 5% 28.4M 0s
00:44:28 50K .......... .......... .......... .......... .......... 10% 5.66M 0s
00:44:28 100K .......... .......... .......... .......... .......... 15% 6.58M 0s
00:44:28 150K .......... .......... .......... .......... .......... 21% 25.7M 0s
00:44:28 200K .......... .......... .......... .......... .......... 26% 18.6M 0s
00:44:28 250K .......... .......... .......... .......... .......... 31% 25.8M 0s
00:44:28 300K .......... .......... .......... .......... .......... 37% 25.0M 0s
00:44:28 350K .......... .......... .......... .......... .......... 42% 34.2M 0s
00:44:28 400K .......... .......... .......... .......... .......... 47% 24.7M 0s
00:44:28 450K .......... .......... .......... .......... .......... 53% 26.9M 0s
00:44:28 500K .......... .......... .......... .......... .......... 58% 27.3M 0s
00:44:28 550K .......... .......... .......... .......... .......... 63% 15.3M 0s
00:44:28 600K .......... .......... .......... .......... .......... 69% 245M 0s
00:44:28 650K .......... .......... .......... .......... .......... 74% 23.0M 0s
00:44:28 700K .......... .......... .......... .......... .......... 79% 30.9M 0s
00:44:28 750K .......... .......... .......... .......... .......... 85% 27.2M 0s
00:44:28 800K .......... .......... .......... .......... .......... 90% 24.0M 0s
00:44:28 850K .......... .......... .......... .......... .......... 95% 33.5M 0s
00:44:28 900K .......... .......... .......... ......... 100% 17.8M=0.05s
00:44:28
00:44:28 2026-03-09 00:44:28 (19.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/regions-2.34.6.jar’ saved [962220/962220]
00:44:28
00:44:28 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:44:28 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:28 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:28 --2026-03-09 00:44:28-- https://repo1.maven.org/maven2/software/amazon/awssdk/identity-spi/2.34.6/identity-spi-2.34.6.jar
00:44:28 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:28 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:28 HTTP request sent, awaiting response... 200 OK
00:44:28 Length: 30963 (30K) [application/java-archive]
00:44:28 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’
00:44:28
00:44:28 0K .......... .......... .......... 100% 34.4M=0.001s
00:44:28
00:44:28 2026-03-09 00:44:28 (34.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/identity-spi-2.34.6.jar’ saved [30963/30963]
00:44:28
00:44:28 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:44:28 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:28 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:28 --2026-03-09 00:44:28-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils/2.34.6/utils-2.34.6.jar
00:44:28 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:28 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:28 HTTP request sent, awaiting response... 200 OK
00:44:28 Length: 241618 (236K) [application/java-archive]
00:44:28 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’
00:44:28
00:44:28 0K .......... .......... .......... .......... .......... 21% 30.8M 0s
00:44:28 50K .......... .......... .......... .......... .......... 42% 5.49M 0s
00:44:28 100K .......... .......... .......... .......... .......... 63% 29.0M 0s
00:44:28 150K .......... .......... .......... .......... .......... 84% 6.97M 0s
00:44:28 200K .......... .......... .......... ..... 100% 33.9M=0.02s
00:44:28
00:44:28 2026-03-09 00:44:28 (11.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-2.34.6.jar’ saved [241618/241618]
00:44:28
00:44:28 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:44:28 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:28 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:28 --2026-03-09 00:44:28-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-client-spi/2.34.6/http-client-spi-2.34.6.jar
00:44:29 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:29 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:29 HTTP request sent, awaiting response... 200 OK
00:44:29 Length: 91685 (90K) [application/java-archive]
00:44:29 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’
00:44:29
00:44:29 0K .......... .......... .......... .......... .......... 55% 29.7M 0s
00:44:29 50K .......... .......... .......... ......... 100% 5.00M=0.009s
00:44:29
00:44:29 2026-03-09 00:44:29 (9.33 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-client-spi-2.34.6.jar’ saved [91685/91685]
00:44:29
00:44:29 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:44:29 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:29 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:29 --2026-03-09 00:44:29-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries/2.34.6/retries-2.34.6.jar
00:44:29 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:29 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:29 HTTP request sent, awaiting response... 200 OK
00:44:29 Length: 66309 (65K) [application/java-archive]
00:44:29 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’
00:44:29
00:44:29 0K .......... .......... .......... .......... .......... 77% 29.8M 0s
00:44:29 50K .......... .... 100% 23.2M=0.002s
00:44:29
00:44:29 2026-03-09 00:44:29 (28.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-2.34.6.jar’ saved [66309/66309]
00:44:29
00:44:29 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:44:29 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:29 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:29 --2026-03-09 00:44:29-- https://repo1.maven.org/maven2/software/amazon/awssdk/url-connection-client/2.34.6/url-connection-client-2.34.6.jar
00:44:29 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:29 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:29 HTTP request sent, awaiting response... 200 OK
00:44:29 Length: 33040 (32K) [application/java-archive]
00:44:29 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’
00:44:29
00:44:29 0K .......... .......... .......... .. 100% 33.1M=0.001s
00:44:29
00:44:29 2026-03-09 00:44:29 (33.1 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/url-connection-client-2.34.6.jar’ saved [33040/33040]
00:44:29
00:44:29 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
00:44:29 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:29 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:29 --2026-03-09 00:44:29-- https://repo1.maven.org/maven2/software/amazon/awssdk/apache-client/2.34.6/apache-client-2.34.6.jar
00:44:29 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:29 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:29 HTTP request sent, awaiting response... 200 OK
00:44:30 Length: 77013 (75K) [application/java-archive]
00:44:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’
00:44:30
00:44:30 0K .......... .......... .......... .......... .......... 66% 29.3M 0s
00:44:30 50K .......... .......... ..... 100% 3.37M=0.009s
00:44:30
00:44:30 2026-03-09 00:44:30 (8.19 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/apache-client-2.34.6.jar’ saved [77013/77013]
00:44:30
00:44:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
00:44:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:30 --2026-03-09 00:44:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/arns/2.34.6/arns-2.34.6.jar
00:44:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:30 HTTP request sent, awaiting response... 200 OK
00:44:30 Length: 16323 (16K) [application/java-archive]
00:44:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’
00:44:30
00:44:30 0K .......... ..... 100% 45.8M=0s
00:44:30
00:44:30 2026-03-09 00:44:30 (45.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/arns-2.34.6.jar’ saved [16323/16323]
00:44:30
00:44:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
00:44:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:30 --2026-03-09 00:44:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-query-protocol/2.34.6/aws-query-protocol-2.34.6.jar
00:44:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:30 HTTP request sent, awaiting response... 200 OK
00:44:30 Length: 69370 (68K) [application/java-archive]
00:44:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’
00:44:30
00:44:30 0K .......... .......... .......... .......... .......... 73% 29.5M 0s
00:44:30 50K .......... ....... 100% 40.0M=0.002s
00:44:30
00:44:30 2026-03-09 00:44:30 (31.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-query-protocol-2.34.6.jar’ saved [69370/69370]
00:44:30
00:44:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
00:44:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:30 --2026-03-09 00:44:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/aws-xml-protocol/2.34.6/aws-xml-protocol-2.34.6.jar
00:44:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:30 HTTP request sent, awaiting response... 200 OK
00:44:30 Length: 102272 (100K) [application/java-archive]
00:44:30 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’
00:44:30
00:44:30 0K .......... .......... .......... .......... .......... 50% 26.5M 0s
00:44:30 50K .......... .......... .......... .......... ......... 100% 5.62M=0.01s
00:44:30
00:44:30 2026-03-09 00:44:30 (9.28 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/aws-xml-protocol-2.34.6.jar’ saved [102272/102272]
00:44:30
00:44:30 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
00:44:30 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:30 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:30 --2026-03-09 00:44:30-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums/2.34.6/checksums-2.34.6.jar
00:44:30 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:30 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:31 HTTP request sent, awaiting response... 200 OK
00:44:31 Length: 69585 (68K) [application/java-archive]
00:44:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’
00:44:31
00:44:31 0K .......... .......... .......... .......... .......... 73% 24.7M 0s
00:44:31 50K .......... ....... 100% 29.6M=0.003s
00:44:31
00:44:31 2026-03-09 00:44:31 (25.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-2.34.6.jar’ saved [69585/69585]
00:44:31
00:44:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
00:44:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:31 --2026-03-09 00:44:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/checksums-spi/2.34.6/checksums-spi-2.34.6.jar
00:44:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:31 HTTP request sent, awaiting response... 200 OK
00:44:31 Length: 8044 (7.9K) [application/java-archive]
00:44:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’
00:44:31
00:44:31 0K ....... 100% 59.2M=0s
00:44:31
00:44:31 2026-03-09 00:44:31 (59.2 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/checksums-spi-2.34.6.jar’ saved [8044/8044]
00:44:31
00:44:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
00:44:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:31 --2026-03-09 00:44:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/crt-core/2.34.6/crt-core-2.34.6.jar
00:44:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:31 HTTP request sent, awaiting response... 200 OK
00:44:31 Length: 17774 (17K) [application/java-archive]
00:44:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’
00:44:31
00:44:31 0K .......... ....... 100% 32.4M=0.001s
00:44:31
00:44:31 2026-03-09 00:44:31 (32.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/crt-core-2.34.6.jar’ saved [17774/17774]
00:44:31
00:44:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
00:44:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:31 --2026-03-09 00:44:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/endpoints-spi/2.34.6/endpoints-spi-2.34.6.jar
00:44:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:31 HTTP request sent, awaiting response... 200 OK
00:44:31 Length: 13168 (13K) [application/java-archive]
00:44:31 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’
00:44:31
00:44:31 0K .......... .. 100% 55.7M=0s
00:44:31
00:44:31 2026-03-09 00:44:31 (55.7 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/endpoints-spi-2.34.6.jar’ saved [13168/13168]
00:44:31
00:44:31 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
00:44:31 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:31 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:31 --2026-03-09 00:44:31-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth/2.34.6/http-auth-2.34.6.jar
00:44:31 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:31 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:32 HTTP request sent, awaiting response... 200 OK
00:44:32 Length: 17475 (17K) [application/java-archive]
00:44:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’
00:44:32
00:44:32 0K .......... ....... 100% 29.4M=0.001s
00:44:32
00:44:32 2026-03-09 00:44:32 (29.4 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-2.34.6.jar’ saved [17475/17475]
00:44:32
00:44:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
00:44:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:32 --2026-03-09 00:44:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws/2.34.6/http-auth-aws-2.34.6.jar
00:44:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:32 HTTP request sent, awaiting response... 200 OK
00:44:32 Length: 168314 (164K) [application/java-archive]
00:44:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’
00:44:32
00:44:32 0K .......... .......... .......... .......... .......... 30% 31.2M 0s
00:44:32 50K .......... .......... .......... .......... .......... 60% 5.59M 0s
00:44:32 100K .......... .......... .......... .......... .......... 91% 6.66M 0s
00:44:32 150K .......... .... 100% 17.9M=0.02s
00:44:32
00:44:32 2026-03-09 00:44:32 (8.71 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-2.34.6.jar’ saved [168314/168314]
00:44:32
00:44:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
00:44:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:32 --2026-03-09 00:44:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-aws-eventstream/2.34.6/http-auth-aws-eventstream-2.34.6.jar
00:44:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:32 HTTP request sent, awaiting response... 200 OK
00:44:32 Length: 8705 (8.5K) [application/java-archive]
00:44:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’
00:44:32
00:44:32 0K ........ 100% 17.3M=0s
00:44:32
00:44:32 2026-03-09 00:44:32 (17.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-aws-eventstream-2.34.6.jar’ saved [8705/8705]
00:44:32
00:44:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
00:44:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:32 --2026-03-09 00:44:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/http-auth-spi/2.34.6/http-auth-spi-2.34.6.jar
00:44:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:32 HTTP request sent, awaiting response... 200 OK
00:44:32 Length: 45762 (45K) [application/java-archive]
00:44:32 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’
00:44:32
00:44:32 0K .......... .......... .......... .......... .... 100% 26.3M=0.002s
00:44:32
00:44:32 2026-03-09 00:44:32 (26.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/http-auth-spi-2.34.6.jar’ saved [45762/45762]
00:44:32
00:44:32 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
00:44:32 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:32 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:32 --2026-03-09 00:44:32-- https://repo1.maven.org/maven2/software/amazon/awssdk/json-utils/2.34.6/json-utils-2.34.6.jar
00:44:32 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:130c, ...
00:44:32 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:33 HTTP request sent, awaiting response... 200 OK
00:44:33 Length: 33225 (32K) [application/java-archive]
00:44:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’
00:44:33
00:44:33 0K .......... .......... .......... .. 100% 31.8M=0.001s
00:44:33
00:44:33 2026-03-09 00:44:33 (31.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/json-utils-2.34.6.jar’ saved [33225/33225]
00:44:33
00:44:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
00:44:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:33 --2026-03-09 00:44:33-- https://repo1.maven.org/maven2/software/amazon/awssdk/metrics-spi/2.34.6/metrics-spi-2.34.6.jar
00:44:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:33 HTTP request sent, awaiting response... 200 OK
00:44:33 Length: 27262 (27K) [application/java-archive]
00:44:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’
00:44:33
00:44:33 0K .......... .......... ...... 100% 34.3M=0.001s
00:44:33
00:44:33 2026-03-09 00:44:33 (34.3 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/metrics-spi-2.34.6.jar’ saved [27262/27262]
00:44:33
00:44:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
00:44:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:33 --2026-03-09 00:44:33-- https://repo1.maven.org/maven2/software/amazon/awssdk/netty-nio-client/2.34.6/netty-nio-client-2.34.6.jar
00:44:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:33 HTTP request sent, awaiting response... 200 OK
00:44:33 Length: 292688 (286K) [application/java-archive]
00:44:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’
00:44:33
00:44:33 0K .......... .......... .......... .......... .......... 17% 30.5M 0s
00:44:33 50K .......... .......... .......... .......... .......... 34% 5.76M 0s
00:44:33 100K .......... .......... .......... .......... .......... 52% 27.5M 0s
00:44:33 150K .......... .......... .......... .......... .......... 69% 7.31M 0s
00:44:33 200K .......... .......... .......... .......... .......... 87% 19.9M 0s
00:44:33 250K .......... .......... .......... ..... 100% 32.1M=0.02s
00:44:33
00:44:33 2026-03-09 00:44:33 (12.6 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/netty-nio-client-2.34.6.jar’ saved [292688/292688]
00:44:33
00:44:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
00:44:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:33 --2026-03-09 00:44:33-- https://repo1.maven.org/maven2/software/amazon/awssdk/profiles/2.34.6/profiles-2.34.6.jar
00:44:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:33 HTTP request sent, awaiting response... 200 OK
00:44:33 Length: 50524 (49K) [application/java-archive]
00:44:33 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’
00:44:33
00:44:33 0K .......... .......... .......... .......... ......... 100% 30.1M=0.002s
00:44:33
00:44:33 2026-03-09 00:44:33 (30.1 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/profiles-2.34.6.jar’ saved [50524/50524]
00:44:33
00:44:33 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
00:44:33 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:33 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:33 --2026-03-09 00:44:33-- https://repo1.maven.org/maven2/software/amazon/awssdk/protocol-core/2.34.6/protocol-core-2.34.6.jar
00:44:33 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:33 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:34 HTTP request sent, awaiting response... 200 OK
00:44:34 Length: 44371 (43K) [application/java-archive]
00:44:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’
00:44:34
00:44:34 0K .......... .......... .......... .......... ... 100% 28.5M=0.001s
00:44:34
00:44:34 2026-03-09 00:44:34 (28.5 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/protocol-core-2.34.6.jar’ saved [44371/44371]
00:44:34
00:44:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
00:44:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:34 --2026-03-09 00:44:34-- https://repo1.maven.org/maven2/software/amazon/awssdk/retries-spi/2.34.6/retries-spi-2.34.6.jar
00:44:34 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:34 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:34 HTTP request sent, awaiting response... 200 OK
00:44:34 Length: 31487 (31K) [application/java-archive]
00:44:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’
00:44:34
00:44:34 0K .......... .......... .......... 100% 33.0M=0.001s
00:44:34
00:44:34 2026-03-09 00:44:34 (33.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/retries-spi-2.34.6.jar’ saved [31487/31487]
00:44:34
00:44:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
00:44:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:34 --2026-03-09 00:44:34-- https://repo1.maven.org/maven2/software/amazon/awssdk/third-party-jackson-core/2.34.6/third-party-jackson-core-2.34.6.jar
00:44:34 Resolving repo1.maven.org (repo1.maven.org)... 104.18.18.12, 104.18.19.12, 2606:4700::6812:120c, ...
00:44:34 Connecting to repo1.maven.org (repo1.maven.org)|104.18.18.12|:443... connected.
00:44:34 HTTP request sent, awaiting response... 200 OK
00:44:34 Length: 535001 (522K) [application/java-archive]
00:44:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’
00:44:34
00:44:34 0K .......... .......... .......... .......... .......... 9% 16.1M 0s
00:44:34 50K .......... .......... .......... .......... .......... 19% 5.30M 0s
00:44:34 100K .......... .......... .......... .......... .......... 28% 19.1M 0s
00:44:34 150K .......... .......... .......... .......... .......... 38% 7.90M 0s
00:44:34 200K .......... .......... .......... .......... .......... 47% 22.6M 0s
00:44:34 250K .......... .......... .......... .......... .......... 57% 17.1M 0s
00:44:34 300K .......... .......... .......... .......... .......... 66% 26.9M 0s
00:44:34 350K .......... .......... .......... .......... .......... 76% 25.5M 0s
00:44:34 400K .......... .......... .......... .......... .......... 86% 30.5M 0s
00:44:34 450K .......... .......... .......... .......... .......... 95% 51.9M 0s
00:44:34 500K .......... .......... .. 100% 12.8M=0.03s
00:44:34
00:44:34 2026-03-09 00:44:34 (15.0 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/third-party-jackson-core-2.34.6.jar’ saved [535001/535001]
00:44:34
00:44:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
00:44:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:34 --2026-03-09 00:44:34-- https://repo1.maven.org/maven2/software/amazon/awssdk/utils-lite/2.34.6/utils-lite-2.34.6.jar
00:44:34 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:130c, ...
00:44:34 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:34 HTTP request sent, awaiting response... 200 OK
00:44:34 Length: 8798 (8.6K) [application/java-archive]
00:44:34 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’
00:44:34
00:44:34 0K ........ 100% 21.8M=0s
00:44:34
00:44:34 2026-03-09 00:44:34 (21.8 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/utils-lite-2.34.6.jar’ saved [8798/8798]
00:44:34
00:44:34 + wget -P /home/omero/workspace/OMERO-server/OMERO.server/lib/server https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
00:44:34 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:44:34 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:44:34 --2026-03-09 00:44:34-- https://repo1.maven.org/maven2/org/reactivestreams/reactive-streams/1.0.4/reactive-streams-1.0.4.jar
00:44:35 Resolving repo1.maven.org (repo1.maven.org)... 104.18.19.12, 104.18.18.12, 2606:4700::6812:120c, ...
00:44:35 Connecting to repo1.maven.org (repo1.maven.org)|104.18.19.12|:443... connected.
00:44:35 HTTP request sent, awaiting response... 200 OK
00:44:35 Length: 11640 (11K) [application/java-archive]
00:44:35 Saving to: ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’
00:44:35
00:44:35 0K .......... . 100% 24.9M=0s
00:44:35
00:44:35 2026-03-09 00:44:35 (24.9 MB/s) - ‘/home/omero/workspace/OMERO-server/OMERO.server/lib/server/reactive-streams-1.0.4.jar’ saved [11640/11640]
00:44:35
00:44:35 + for x in *.jar
00:44:35 + mv omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar /home/omero/workspace/OMERO-server/OMERO.server/lib/server
00:44:35 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
00:44:35 ++ deactivate nondestructive
00:44:35 ++ '[' -n '' ']'
00:44:35 ++ '[' -n '' ']'
00:44:35 ++ hash -r
00:44:35 ++ '[' -n '' ']'
00:44:35 ++ unset VIRTUAL_ENV
00:44:35 ++ unset VIRTUAL_ENV_PROMPT
00:44:35 ++ '[' '!' nondestructive = nondestructive ']'
00:44:35 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
00:44:35 ++ export VIRTUAL_ENV
00:44:35 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:44:35 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:44:35 ++ export PATH
00:44:35 ++ '[' -n '' ']'
00:44:35 ++ '[' -z '' ']'
00:44:35 ++ _OLD_VIRTUAL_PS1=
00:44:35 ++ PS1='(.venv3) '
00:44:35 ++ export PS1
00:44:35 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:44:35 ++ export VIRTUAL_ENV_PROMPT
00:44:35 ++ hash -r
00:44:35 + pip install -U pip
00:44:35 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
00:44:35 Collecting pip
00:44:35 Using cached pip-26.0.1-py3-none-any.whl (1.8 MB)
00:44:35 Installing collected packages: pip
00:44:35 Attempting uninstall: pip
00:44:35 Found existing installation: pip 22.3.1
00:44:35 Uninstalling pip-22.3.1:
00:44:35 Successfully uninstalled pip-22.3.1
00:44:36 Successfully installed pip-26.0.1
00:44:36 WARNING: There was an error checking the latest version of pip.
00:44:36 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:44:37 Collecting zeroc-ice==3.6.5
00:44:37 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:44:40 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 10.6 MB/s 0:00:03
00:44:41 Installing collected packages: zeroc-ice
00:44:41 Successfully installed zeroc-ice-3.6.5
00:44:42 + pip install markdown
00:44:42 Collecting markdown
00:44:42 Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
00:44:42 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
00:44:42 Installing collected packages: markdown
00:44:42 Successfully installed markdown-3.10.2
00:44:42 + pip install reportlab
00:44:43 Collecting reportlab
00:44:43 Using cached reportlab-4.4.10-py3-none-any.whl.metadata (1.7 kB)
00:44:43 Collecting pillow>=9.0.0 (from reportlab)
00:44:43 Using cached pillow-12.1.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
00:44:43 Collecting charset-normalizer (from reportlab)
00:44:43 Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (39 kB)
00:44:43 Using cached reportlab-4.4.10-py3-none-any.whl (2.0 MB)
00:44:43 Using cached pillow-12.1.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
00:44:43 Using cached charset_normalizer-3.4.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (193 kB)
00:44:43 Installing collected packages: pillow, charset-normalizer, reportlab
00:44:44
00:44:44 Successfully installed charset-normalizer-3.4.5 pillow-12.1.1 reportlab-4.4.10
00:44:44 + pip install omego
00:44:44 Collecting omego
00:44:44 Using cached omego-0.8.0-py3-none-any.whl.metadata (1.9 kB)
00:44:45 Collecting future (from omego)
00:44:45 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:44:45 Collecting yaclifw>=0.1.1 (from omego)
00:44:45 Using cached yaclifw-0.2.0-py3-none-any.whl
00:44:45 Collecting six (from yaclifw>=0.1.1->omego)
00:44:45 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
00:44:45 Using cached omego-0.8.0-py3-none-any.whl (41 kB)
00:44:45 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:44:45 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
00:44:45 Installing collected packages: six, future, yaclifw, omego
00:44:45
00:44:45 Successfully installed future-1.0.0 omego-0.8.0 six-1.17.0 yaclifw-0.2.0
00:44:45 + pip install tables
00:44:45 Collecting tables
00:44:45 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
00:44:46 Collecting numpy>=1.20.0 (from tables)
00:44:46 Using cached numpy-2.4.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
00:44:46 Collecting numexpr>=2.6.2 (from tables)
00:44:46 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
00:44:46 Collecting packaging (from tables)
00:44:46 Using cached packaging-26.0-py3-none-any.whl.metadata (3.3 kB)
00:44:46 Collecting py-cpuinfo (from tables)
00:44:46 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
00:44:46 Collecting blosc2>=2.3.0 (from tables)
00:44:46 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (6.2 kB)
00:44:46 Collecting ndindex (from blosc2>=2.3.0->tables)
00:44:46 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
00:44:46 Collecting msgpack (from blosc2>=2.3.0->tables)
00:44:46 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:44:46 Collecting requests (from blosc2>=2.3.0->tables)
00:44:46 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
00:44:46 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.5)
00:44:46 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
00:44:46 Using cached idna-3.11-py3-none-any.whl.metadata (8.4 kB)
00:44:46 Collecting urllib3<3,>=1.21.1 (from requests->blosc2>=2.3.0->tables)
00:44:46 Using cached urllib3-2.6.3-py3-none-any.whl.metadata (6.9 kB)
00:44:46 Collecting certifi>=2017.4.17 (from requests->blosc2>=2.3.0->tables)
00:44:46 Using cached certifi-2026.2.25-py3-none-any.whl.metadata (2.5 kB)
00:44:46 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
00:44:46 Using cached blosc2-4.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (5.2 MB)
00:44:46 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
00:44:46 Using cached numpy-2.4.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
00:44:46 Using cached msgpack-1.1.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (426 kB)
00:44:46 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
00:44:46 Using cached packaging-26.0-py3-none-any.whl (74 kB)
00:44:46 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
00:44:46 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
00:44:46 Using cached idna-3.11-py3-none-any.whl (71 kB)
00:44:46 Using cached urllib3-2.6.3-py3-none-any.whl (131 kB)
00:44:46 Using cached certifi-2026.2.25-py3-none-any.whl (153 kB)
00:44:46 Installing collected packages: py-cpuinfo, urllib3, packaging, numpy, ndindex, msgpack, idna, certifi, requests, numexpr, blosc2, tables
00:44:50
00:44:50 Successfully installed blosc2-4.1.2 certifi-2026.2.25 idna-3.11 msgpack-1.1.2 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.2 packaging-26.0 py-cpuinfo-9.0.0 requests-2.32.5 tables-3.11.1 urllib3-2.6.3
00:44:50 + pip install jinja2
00:44:50 Collecting jinja2
00:44:50 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
00:44:50 Collecting MarkupSafe>=2.0 (from jinja2)
00:44:50 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
00:44:50 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
00:44:50 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
00:44:50 Installing collected packages: MarkupSafe, jinja2
00:44:50
00:44:50 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
00:44:50 + pip install omero-py
00:44:51 Collecting omero-py
00:44:51 Using cached omero_py-5.22.0-py3-none-any.whl.metadata (6.5 kB)
00:44:51 Collecting appdirs (from omero-py)
00:44:51 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:44:51 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
00:44:51 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.2)
00:44:51 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.1.1)
00:44:51 Collecting PyYAML (from omero-py)
00:44:51 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
00:44:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
00:44:51 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.32.5)
00:44:51 Collecting portalocker (from omero-py)
00:44:51 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:44:51 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.5)
00:44:51 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.11)
00:44:51 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.6.3)
00:44:51 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.2.25)
00:44:51 Using cached omero_py-5.22.0-py3-none-any.whl (2.8 MB)
00:44:51 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:44:51 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:44:51 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
00:44:51 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
00:44:53
00:44:53 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.22.0 portalocker-3.2.0
00:44:53 + pip install pyarrow
00:44:53 Collecting pyarrow
00:44:53 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.1 kB)
00:44:53 Using cached pyarrow-23.0.1-cp311-cp311-manylinux_2_28_x86_64.whl (47.6 MB)
00:44:54 Installing collected packages: pyarrow
00:44:55 Successfully installed pyarrow-23.0.1
00:44:56 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
00:44:56 Collecting omero-metadata
00:44:56 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-a_gx4py0/omero-metadata_4eb3773150d74edc993992a915cdedc2
00:44:56 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-a_gx4py0/omero-metadata_4eb3773150d74edc993992a915cdedc2
00:44:57 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 05c2ea386ad9f6e13b784bda45d0e26f58e1b87d
00:44:57 Installing build dependencies: started
00:44:57 Installing build dependencies: finished with status 'done'
00:44:57 Getting requirements to build wheel: started
00:44:58 Getting requirements to build wheel: finished with status 'done'
00:44:58 Preparing metadata (pyproject.toml): started
00:44:58 Preparing metadata (pyproject.toml): finished with status 'done'
00:44:58 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.22.0)
00:44:58 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
00:44:58 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
00:44:58 Collecting pandas (from omero-metadata)
00:44:58 Using cached pandas-3.0.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:44:58 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
00:44:58 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
00:44:58 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.2)
00:44:58 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.1.1)
00:44:58 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
00:44:58 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.32.5)
00:44:58 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
00:44:58 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
00:44:58 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
00:44:58 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
00:44:58 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
00:44:58 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.5)
00:44:58 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.11)
00:44:58 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.6.3)
00:44:58 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.2.25)
00:44:58 Using cached pandas-3.0.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.3 MB)
00:44:58 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
00:44:58 Building wheels for collected packages: omero-metadata
00:44:58 Building wheel for omero-metadata (pyproject.toml): started
00:44:59 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
00:44:59 Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39376 sha256=f574847c58022fe30c6b7b0b2e191041bfd81f849c3489748169017e411389b6
00:44:59 Stored in directory: /tmp/pip-ephem-wheel-cache-07yy8pem/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
00:44:59 Successfully built omero-metadata
00:44:59 Installing collected packages: python-dateutil, pandas, omero-metadata
00:45:03
00:45:03 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.1 python-dateutil-2.9.0.post0
00:45:03 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
00:45:03 Collecting omero-cli-render
00:45:03 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-5nlnfkfs/omero-cli-render_4c41c92ad1014bc2977774d9d00a8cfc
00:45:03 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-5nlnfkfs/omero-cli-render_4c41c92ad1014bc2977774d9d00a8cfc
00:45:04 Running command git checkout -b merge_ci --track origin/merge_ci
00:45:05 Switched to a new branch 'merge_ci'
00:45:05 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:45:05 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 15f959aebcd55c7fc29988f840479ed5d882ddd6
00:45:05 Installing build dependencies: started
00:45:05 Installing build dependencies: finished with status 'done'
00:45:05 Getting requirements to build wheel: started
00:45:06 Getting requirements to build wheel: finished with status 'done'
00:45:06 Preparing metadata (pyproject.toml): started
00:45:06 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:06 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
00:45:06 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.22.0)
00:45:06 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
00:45:06 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
00:45:06 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.2)
00:45:06 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.1.1)
00:45:06 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
00:45:06 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.32.5)
00:45:06 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
00:45:06 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.5)
00:45:06 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.11)
00:45:06 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.6.3)
00:45:06 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.2.25)
00:45:06 Building wheels for collected packages: omero-cli-render
00:45:06 Building wheel for omero-cli-render (pyproject.toml): started
00:45:06 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
00:45:06 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19840 sha256=00f81cb7482844370afff56ace986cd5a55967f35c1fe54dbab95fa71fa55fdd
00:45:06 Stored in directory: /tmp/pip-ephem-wheel-cache-tgl8v124/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
00:45:06 Successfully built omero-cli-render
00:45:06 Installing collected packages: omero-cli-render
00:45:06 Successfully installed omero-cli-render-0.8.2.dev0
00:45:06 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
00:45:07 Collecting omero-cli-duplicate
00:45:07 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-poqlzvay/omero-cli-duplicate_7a47fcbd8ac94ff88c0a405b99e881e5
00:45:07 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-poqlzvay/omero-cli-duplicate_7a47fcbd8ac94ff88c0a405b99e881e5
00:45:07 Running command git checkout -b merge_ci --track origin/merge_ci
00:45:08 Switched to a new branch 'merge_ci'
00:45:08 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:45:08 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit a334c04f377cc883b26436d8124776829e47ae53
00:45:08 Installing build dependencies: started
00:45:08 Installing build dependencies: finished with status 'done'
00:45:08 Getting requirements to build wheel: started
00:45:09 Getting requirements to build wheel: finished with status 'done'
00:45:09 Preparing metadata (pyproject.toml): started
00:45:09 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:09 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.0)
00:45:09 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
00:45:09 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
00:45:09 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.2)
00:45:09 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.1.1)
00:45:09 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
00:45:09 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
00:45:09 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.32.5)
00:45:09 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
00:45:09 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.5)
00:45:09 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.11)
00:45:09 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.6.3)
00:45:09 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.2.25)
00:45:09 Building wheels for collected packages: omero-cli-duplicate
00:45:09 Building wheel for omero-cli-duplicate (pyproject.toml): started
00:45:09 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
00:45:09 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11539 sha256=5ed0f9896b24984cedab37b9273a688b2465c1ce8841c3e1de4c956d1f1117e4
00:45:09 Stored in directory: /tmp/pip-ephem-wheel-cache-16zoo4bh/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
00:45:09 Successfully built omero-cli-duplicate
00:45:09 Installing collected packages: omero-cli-duplicate
00:45:09 Successfully installed omero-cli-duplicate-0.4.1.dev0
00:45:09 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
00:45:09 Collecting omero-cli-zarr
00:45:09 Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-ubcvgn7a/omero-cli-zarr_62b8bb5a6d4f4d52b122ba20e13f2e74
00:45:09 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-ubcvgn7a/omero-cli-zarr_62b8bb5a6d4f4d52b122ba20e13f2e74
00:45:10 Running command git checkout -b merge_ci --track origin/merge_ci
00:45:11 Switched to a new branch 'merge_ci'
00:45:11 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:45:11 Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit bfb29909a6b4ccf6402ffa90b70d6d308cc48a7d
00:45:11 Installing build dependencies: started
00:45:11 Installing build dependencies: finished with status 'done'
00:45:11 Getting requirements to build wheel: started
00:45:12 Getting requirements to build wheel: finished with status 'done'
00:45:12 Installing backend dependencies: started
00:45:13 Installing backend dependencies: finished with status 'done'
00:45:13 Preparing metadata (pyproject.toml): started
00:45:13 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:13 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.22.0)
00:45:13 Collecting ome-zarr>=0.13.0 (from omero-cli-zarr)
00:45:13 Using cached ome_zarr-0.13.0-py3-none-any.whl.metadata (2.9 kB)
00:45:13 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.4.2)
00:45:13 Collecting dask<=2026.1.1,>=2025.12.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:13 Using cached dask-2026.1.1-py3-none-any.whl.metadata (3.8 kB)
00:45:13 Collecting zarr>=3.0.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:13 Using cached zarr-3.1.5-py3-none-any.whl.metadata (10 kB)
00:45:13 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:13 Using cached fsspec-2026.2.0-py3-none-any.whl.metadata (10 kB)
00:45:14 Collecting aiohttp (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.1 kB)
00:45:14 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.32.5)
00:45:14 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
00:45:14 Collecting toolz (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
00:45:14 Collecting rangehttpserver (from ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
00:45:14 Collecting click>=8.1 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached click-8.3.1-py3-none-any.whl.metadata (2.6 kB)
00:45:14 Collecting cloudpickle>=3.0.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
00:45:14 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (26.0)
00:45:14 Collecting partd>=1.4.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
00:45:14 Requirement already satisfied: pyyaml>=5.3.1 in ./.venv3/lib64/python3.11/site-packages (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr) (6.0.3)
00:45:14 Collecting importlib_metadata>=4.13.0 (from dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached importlib_metadata-8.7.1-py3-none-any.whl.metadata (4.7 kB)
00:45:14 Collecting s3fs>2024.2.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached s3fs-2026.2.0-py3-none-any.whl.metadata (1.2 kB)
00:45:14 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached zipp-3.23.0-py3-none-any.whl.metadata (3.6 kB)
00:45:14 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
00:45:14 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
00:45:14 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.1.1)
00:45:14 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
00:45:14 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
00:45:14 Collecting locket (from partd>=1.4.0->dask<=2026.1.1,>=2025.12.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
00:45:14 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached aiobotocore-3.2.1-py3-none-any.whl.metadata (26 kB)
00:45:14 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:14 Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
00:45:15 Collecting botocore<1.42.62,>=1.42.53 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached botocore-1.42.61-py3-none-any.whl.metadata (5.9 kB)
00:45:15 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.9.0.post0)
00:45:15 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
00:45:15 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
00:45:15 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
00:45:15 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl.metadata (5.9 kB)
00:45:15 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
00:45:15 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached attrs-25.4.0-py3-none-any.whl.metadata (10 kB)
00:45:15 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
00:45:15 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:15 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (13 kB)
00:45:16 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
00:45:16 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.42.62,>=1.42.53->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.6.3)
00:45:16 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (1.17.0)
00:45:16 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr) (3.11)
00:45:16 Collecting typing-extensions>=4.2 (from aiosignal>=1.4.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB)
00:45:16 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
00:45:16 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
00:45:16 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached imageio-2.37.2-py3-none-any.whl.metadata (9.7 kB)
00:45:16 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached tifffile-2026.3.3-py3-none-any.whl.metadata (31 kB)
00:45:16 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached lazy_loader-0.5-py3-none-any.whl.metadata (5.9 kB)
00:45:16 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
00:45:16 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
00:45:16 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
00:45:16 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
00:45:16 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (3.4.5)
00:45:16 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (2026.2.25)
00:45:16 Using cached ome_zarr-0.13.0-py3-none-any.whl (42 kB)
00:45:16 Using cached dask-2026.1.1-py3-none-any.whl (1.5 MB)
00:45:16 Using cached click-8.3.1-py3-none-any.whl (108 kB)
00:45:16 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
00:45:16 Using cached fsspec-2026.2.0-py3-none-any.whl (202 kB)
00:45:16 Using cached importlib_metadata-8.7.1-py3-none-any.whl (27 kB)
00:45:16 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
00:45:16 Using cached s3fs-2026.2.0-py3-none-any.whl (31 kB)
00:45:16 Using cached aiobotocore-3.2.1-py3-none-any.whl (87 kB)
00:45:16 Using cached aiohttp-3.13.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.7 MB)
00:45:16 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
00:45:16 Using cached botocore-1.42.61-py3-none-any.whl (14.6 MB)
00:45:16 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
00:45:16 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
00:45:16 Using cached wrapt-2.1.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (114 kB)
00:45:16 Using cached yarl-1.23.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (102 kB)
00:45:16 Using cached aiohappyeyeballs-2.6.1-py3-none-any.whl (15 kB)
00:45:16 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
00:45:16 Using cached attrs-25.4.0-py3-none-any.whl (67 kB)
00:45:16 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
00:45:16 Using cached propcache-0.4.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (210 kB)
00:45:16 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
00:45:16 Using cached imageio-2.37.2-py3-none-any.whl (317 kB)
00:45:16 Using cached lazy_loader-0.5-py3-none-any.whl (8.0 kB)
00:45:16 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
00:45:16 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.3 MB)
00:45:16 Using cached tifffile-2026.3.3-py3-none-any.whl (243 kB)
00:45:16 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
00:45:16 Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB)
00:45:16 Using cached zarr-3.1.5-py3-none-any.whl (284 kB)
00:45:16 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
00:45:16 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
00:45:16 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
00:45:16 Using cached zipp-3.23.0-py3-none-any.whl (10 kB)
00:45:16 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
00:45:16 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
00:45:17 Building wheels for collected packages: omero-cli-zarr
00:45:17 Building wheel for omero-cli-zarr (pyproject.toml): started
00:45:17 Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
00:45:17 Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev162+gbfb2990-py3-none-any.whl size=38290 sha256=12b62474db9dfda69b8fdb60f7bf46030fba58a483fe7452c8402e5ce086d4a9
00:45:17 Stored in directory: /tmp/pip-ephem-wheel-cache-p6bww4kr/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
00:45:17 Successfully built omero-cli-zarr
00:45:17 Installing collected packages: rangehttpserver, zipp, wrapt, typing-extensions, toolz, tifffile, scipy, propcache, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, yarl, scikit-image, partd, numcodecs, importlib_metadata, botocore, aiosignal, zarr, dask, aiohttp, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
00:45:27
00:45:27 Successfully installed aiobotocore-3.2.1 aiohappyeyeballs-2.6.1 aiohttp-3.13.3 aioitertools-0.13.0 aiosignal-1.4.0 attrs-25.4.0 botocore-1.42.61 click-8.3.1 cloudpickle-3.1.2 dask-2026.1.1 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.2.0 google-crc32c-1.8.0 imageio-2.37.2 importlib_metadata-8.7.1 jmespath-1.1.0 lazy-loader-0.5 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.13.0 omero-cli-zarr-0.5.5.dev162+gbfb2990 partd-1.4.2 propcache-0.4.1 rangehttpserver-1.4.0 s3fs-2026.2.0 scikit-image-0.26.0 scipy-1.17.1 tifffile-2026.3.3 toolz-1.1.0 typing-extensions-4.15.0 wrapt-2.1.2 yarl-1.23.0 zarr-3.1.5 zipp-3.23.0
00:45:28 + pip install omero-certificates
00:45:28 Collecting omero-certificates
00:45:28 Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
00:45:28 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.0)
00:45:28 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
00:45:28 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
00:45:28 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.2)
00:45:28 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.1.1)
00:45:28 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
00:45:28 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
00:45:28 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.32.5)
00:45:28 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
00:45:28 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.5)
00:45:28 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.11)
00:45:28 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.6.3)
00:45:28 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.2.25)
00:45:28 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
00:45:28 Installing collected packages: omero-certificates
00:45:28 Successfully installed omero-certificates-0.4.0
00:45:28 + for x in *.tar.gz
00:45:28 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
00:45:28 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:45:28 Installing build dependencies: started
00:45:29 Installing build dependencies: finished with status 'done'
00:45:29 Getting requirements to build wheel: started
00:45:30 Getting requirements to build wheel: finished with status 'done'
00:45:30 Preparing metadata (pyproject.toml): started
00:45:30 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:30 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.22.0)
00:45:30 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:45:30 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:45:30 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.2)
00:45:30 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.1.1)
00:45:30 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
00:45:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:45:30 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
00:45:30 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
00:45:30 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.5)
00:45:30 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
00:45:30 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
00:45:30 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.2.25)
00:45:30 Building wheels for collected packages: omero-dropbox
00:45:30 Building wheel for omero-dropbox (pyproject.toml): started
00:45:30 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:45:30 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49155 sha256=8ebfeca0fc53046d298838763aa9a34f5bd022da990136288263561657167c98
00:45:30 Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
00:45:30 Successfully built omero-dropbox
00:45:30 Installing collected packages: omero-dropbox
00:45:30 Successfully installed omero-dropbox-5.7.1.dev0
00:45:30 + for x in *.tar.gz
00:45:30 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
00:45:31 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:45:31 Installing build dependencies: started
00:45:31 Installing build dependencies: finished with status 'done'
00:45:31 Getting requirements to build wheel: started
00:45:32 Getting requirements to build wheel: finished with status 'done'
00:45:32 Preparing metadata (pyproject.toml): started
00:45:32 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:32 Building wheels for collected packages: omero_marshal
00:45:32 Building wheel for omero_marshal (pyproject.toml): started
00:45:32 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:45:32 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88131 sha256=d88897a5de32f746ff5eec6e7c809ed6d60dd2eaf0320be65c5c1a3e02521eae
00:45:32 Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
00:45:32 Successfully built omero_marshal
00:45:32 Installing collected packages: omero_marshal
00:45:32 Successfully installed omero_marshal-0.9.2.dev0
00:45:33 + for x in *.tar.gz
00:45:33 + pip install -U omero_py-5.22.1.dev0.tar.gz
00:45:33 Processing ./omero_py-5.22.1.dev0.tar.gz
00:45:33 Installing build dependencies: started
00:45:34 Installing build dependencies: finished with status 'done'
00:45:34 Getting requirements to build wheel: started
00:45:34 Getting requirements to build wheel: finished with status 'done'
00:45:34 Preparing metadata (pyproject.toml): started
00:45:34 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:34 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (1.4.4)
00:45:34 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (1.0.0)
00:45:34 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (2.4.2)
00:45:34 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (12.1.1)
00:45:34 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (6.0.3)
00:45:34 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (3.6.5)
00:45:34 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (2.32.5)
00:45:34 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.1.dev0) (3.2.0)
00:45:34 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (3.4.5)
00:45:34 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (3.11)
00:45:34 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (2.6.3)
00:45:34 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.1.dev0) (2026.2.25)
00:45:34 Building wheels for collected packages: omero-py
00:45:34 Building wheel for omero-py (pyproject.toml): started
00:45:35 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:45:35 Created wheel for omero-py: filename=omero_py-5.22.1.dev0-py3-none-any.whl size=2786653 sha256=073a67c59a78c2244e16467bac204a8acde3df8a0f532be4ba40d3de90b26f51
00:45:35 Stored in directory: /home/omero/.cache/pip/wheels/e5/0d/4a/1d505358a194b66ce24f7dc55acc515e437e72953730429407
00:45:35 Successfully built omero-py
00:45:36 Installing collected packages: omero-py
00:45:36 Attempting uninstall: omero-py
00:45:36 Found existing installation: omero-py 5.22.0
00:45:36 Uninstalling omero-py-5.22.0:
00:45:36 Successfully uninstalled omero-py-5.22.0
00:45:38 Successfully installed omero-py-5.22.1.dev0
00:45:38 + for x in *.tar.gz
00:45:38 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
00:45:38 Processing ./omero_scripts-5.10.1.dev0.tar.gz
00:45:38 Installing build dependencies: started
00:45:39 Installing build dependencies: finished with status 'done'
00:45:39 Getting requirements to build wheel: started
00:45:39 Getting requirements to build wheel: finished with status 'done'
00:45:39 Preparing metadata (pyproject.toml): started
00:45:40 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:40 Building wheels for collected packages: omero-scripts
00:45:40 Building wheel for omero-scripts (pyproject.toml): started
00:45:40 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:45:40 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137002 sha256=346b118f387f4ed7827af340c4f211397c4f8dc2a1141baf7f1ab3cb7377f2d2
00:45:40 Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
00:45:40 Successfully built omero-scripts
00:45:40 Installing collected packages: omero-scripts
00:45:40 Successfully installed omero-scripts-5.10.1.dev0
00:45:40 + for x in *.tar.gz
00:45:40 + pip install -U omero_web-5.31.1.dev0.tar.gz
00:45:40 Processing ./omero_web-5.31.1.dev0.tar.gz
00:45:41 Installing build dependencies: started
00:45:41 Installing build dependencies: finished with status 'done'
00:45:41 Getting requirements to build wheel: started
00:45:42 Getting requirements to build wheel: finished with status 'done'
00:45:42 Preparing metadata (pyproject.toml): started
00:45:42 Preparing metadata (pyproject.toml): finished with status 'done'
00:45:42 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (5.22.1.dev0)
00:45:42 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.31.1.dev0)
00:45:42 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
00:45:42 Collecting Django<5.3,>=5.2.9 (from omero-web==5.31.1.dev0)
00:45:42 Using cached django-5.2.12-py3-none-any.whl.metadata (4.1 kB)
00:45:42 Collecting django-pipeline>=4.1.0 (from omero-web==5.31.1.dev0)
00:45:42 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
00:45:42 Collecting django-cors-headers==3.7.0 (from omero-web==5.31.1.dev0)
00:45:42 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:45:42 Collecting whitenoise>=5.3.0 (from omero-web==5.31.1.dev0)
00:45:42 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
00:45:42 Collecting gunicorn>=19.3 (from omero-web==5.31.1.dev0)
00:45:42 Using cached gunicorn-25.1.0-py3-none-any.whl.metadata (5.5 kB)
00:45:42 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (0.9.2.dev0)
00:45:42 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (12.1.1)
00:45:42 Collecting pytz (from omero-web==5.31.1.dev0)
00:45:42 Using cached pytz-2026.1.post1-py2.py3-none-any.whl.metadata (22 kB)
00:45:42 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (3.2.0)
00:45:42 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.31.1.dev0) (26.0)
00:45:42 Collecting importlib-resources (from omero-web==5.31.1.dev0)
00:45:42 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:45:43 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
00:45:43 Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
00:45:43 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.31.1.dev0)
00:45:43 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
00:45:43 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0) (65.5.1)
00:45:43 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.31.1.dev0)
00:45:43 Using cached wheel-0.46.3-py3-none-any.whl.metadata (2.4 kB)
00:45:43 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.4.4)
00:45:43 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (1.0.0)
00:45:43 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.4.2)
00:45:43 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (6.0.3)
00:45:43 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.6.5)
00:45:43 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.32.5)
00:45:43 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.4.5)
00:45:43 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (3.11)
00:45:43 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2.6.3)
00:45:43 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.31.1.dev0) (2026.2.25)
00:45:43 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:45:43 Using cached django-5.2.12-py3-none-any.whl (8.3 MB)
00:45:43 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
00:45:43 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
00:45:43 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
00:45:43 Using cached gunicorn-25.1.0-py3-none-any.whl (197 kB)
00:45:43 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
00:45:43 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
00:45:43 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:45:43 Using cached pytz-2026.1.post1-py2.py3-none-any.whl (510 kB)
00:45:43 Using cached wheel-0.46.3-py3-none-any.whl (30 kB)
00:45:43 Building wheels for collected packages: omero-web
00:45:43 Building wheel for omero-web (pyproject.toml): started
00:45:44 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:45:44 Created wheel for omero-web: filename=omero_web-5.31.1.dev0-py3-none-any.whl size=2819307 sha256=f9125a56366e659a7994337ec9ad1097861a8089e13678c4ff88304a2f5ee6e8
00:45:44 Stored in directory: /home/omero/.cache/pip/wheels/48/a3/5b/968853abf49b64e1726fdb37874d77f08ddad2d06b53de06b3
00:45:44 Successfully built omero-web
00:45:44 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
00:45:47
00:45:47 Successfully installed Django-5.2.12 asgiref-3.11.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-25.1.0 importlib-resources-6.5.2 omero-web-5.31.1.dev0 pytz-2026.1.post1 sqlparse-0.5.5 wheel-0.46.3 whitenoise-6.12.0
00:45:47 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:45:47 Will not apply HSTS. The HSTS database must be a regular and non-world-writable file.
00:45:47 ERROR: could not open HSTS store at '/home/omero/.wget-hsts'. HSTS will be disabled.
00:45:47 --2026-03-09 00:45:47-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
00:45:47 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.111.133, 185.199.108.133, 185.199.110.133, ...
00:45:47 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.111.133|:443... connected.
00:45:47 HTTP request sent, awaiting response... 200 OK
00:45:47 Length: 135020 (132K) [text/plain]
00:45:47 Saving to: ‘Figure_To_Pdf.py’
00:45:47
00:45:47 0K .......... .......... .......... .......... .......... 37% 3.81M 0s
00:45:47 50K .......... .......... .......... .......... .......... 75% 5.94M 0s
00:45:47 100K .......... .......... .......... . 100% 24.9M=0.02s
00:45:47
00:45:47 2026-03-09 00:45:47 (5.78 MB/s) - ‘Figure_To_Pdf.py’ saved [135020/135020]
00:45:47
00:45:47 + chmod 755 Figure_To_Pdf.py
00:45:47 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
00:45:47 + omero config set omero.db.name OMERO-server
00:45:49 + omero config set omero.db.host pg
00:45:51 + omero config set omero.db.user postgres
00:45:53 + omero config set omero.data.dir /home/omero/omero-server-data
00:45:55 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
00:45:57 + omero config set omero.db.poolsize 25
00:45:59 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
00:46:01 + omero config set omero.security.trustStorePassword changeit
00:46:03 + omero config set omero.mail.config true
00:46:05 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
00:46:07 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
00:46:09 + omero certificates
00:46:11 OpenSSL 3.5.1 1 Jul 2025 (Library: OpenSSL 3.5.1 1 Jul 2025)
00:46:11 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
00:46:11 + '[' false = true ']'
00:46:11 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
00:46:11 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
00:46:11 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
00:46:11 2026-03-09 00:46:11,395 [ omego.db] DEBUG dbcommand => upgrade
00:46:11 2026-03-09 00:46:11,395 [ omego.db] DEBUG dbhost => localhost
00:46:11 2026-03-09 00:46:11,395 [ omego.db] DEBUG dbname => OMERO-server
00:46:11 2026-03-09 00:46:11,395 [ omego.db] DEBUG dbpass => omero
00:46:11 2026-03-09 00:46:11,395 [ omego.db] DEBUG dbuser => omero
00:46:11 2026-03-09 00:46:11,396 [ omego.db] DEBUG rootpass => omero
00:46:11 2026-03-09 00:46:11,396 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
00:46:11 2026-03-09 00:46:11,396 [omego.extern] INFO Executing : omero version
00:46:13 OMERO.py version:
00:46:13 OMERO.server version:
00:46:13 5.6.3-594-e419881d2e-ice36-b75
00:46:13 5.22.1.dev0
00:46:13 2026-03-09 00:46:13,394 [omego.extern] INFO Completed [1.998 s]
00:46:13 2026-03-09 00:46:13,394 [omego.extern] DEBUG Using omero CLI from omero
00:46:13 2026-03-09 00:46:13,394 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
00:46:13 2026-03-09 00:46:13,394 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:46:13 2026-03-09 00:46:13,394 [omego.extern] INFO Executing : omero config get --show-password
00:46:15 2026-03-09 00:46:15,334 [omego.extern] INFO Completed [1.940 s]
00:46:15 2026-03-09 00:46:15,334 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:46:15 2026-03-09 00:46:15,335 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
00:46:15 2026-03-09 00:46:15,340 [omego.extern] INFO Completed [0.006 s]
00:46:15 2026-03-09 00:46:15,340 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.11\n'
00:46:15 2026-03-09 00:46:15,341 [ omego.db] INFO psql version: psql (PostgreSQL) 16.11
00:46:15
00:46:15 2026-03-09 00:46:15,341 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:46:15 2026-03-09 00:46:15,341 [omego.extern] INFO Executing : omero config get --show-password
00:46:17 2026-03-09 00:46:17,341 [omego.extern] INFO Completed [2.000 s]
00:46:17 2026-03-09 00:46:17,341 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:46:17 2026-03-09 00:46:17,341 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
00:46:17 2026-03-09 00:46:17,350 [omego.extern] INFO Completed [0.009 s]
00:46:17 2026-03-09 00:46:17,350 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.2") at port "5432".\n'
00:46:17 2026-03-09 00:46:17,350 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:46:17 2026-03-09 00:46:17,350 [omego.extern] INFO Running [current environment]: omero config get --show-password
00:46:17 2026-03-09 00:46:17,350 [omego.extern] INFO Executing : omero config get --show-password
00:46:19 2026-03-09 00:46:19,300 [omego.extern] INFO Completed [1.950 s]
00:46:19 2026-03-09 00:46:19,300 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
00:46:19 2026-03-09 00:46:19,300 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
00:46:19 2026-03-09 00:46:19,311 [omego.extern] INFO Completed [0.010 s]
00:46:19 2026-03-09 00:46:19,311 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
00:46:19 2026-03-09 00:46:19,311 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
00:46:19 2026-03-09 00:46:19,313 [ omego.db] INFO Database is already at OMERO5.4__0
00:46:19 + export LANG=en_US.UTF-8
00:46:19 + LANG=en_US.UTF-8
00:46:19 + export LANGUAGE=en_US:en
00:46:19 + LANGUAGE=en_US:en
00:46:19 + export LC_ALL=en_US.UTF-8
00:46:19 + LC_ALL=en_US.UTF-8
00:46:19 + BUILD_ID=DONT_KILL_ME
00:46:19 + omero admin start
00:46:24 No descriptor given. Using etc/grid/default.xml
00:46:32 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
00:46:32 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
00:46:32 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
00:46:32 Waiting on startup. Use CTRL-C to exit
00:46:32 + omero admin waitup
00:46:34 Waiting on startup. Use CTRL-C to exit
00:46:34 + omero admin diagnostics
00:46:37
00:46:37 ================================================================================
00:46:37 OMERO Diagnostics (admin)
00:46:37 ================================================================================
00:46:37
00:46:37 Commands: java -version 17.0.17 (/usr/bin/java)
00:46:37 Commands: python -V 3.11.13 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
00:46:37 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
00:46:37 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
00:46:37 Commands: psql --version 16.11 (/usr/bin/psql)
00:46:37 Commands: openssl version 3.5.11 (/usr/bin/openssl)
00:46:37
00:46:37 Component: OMERO.py 5.22.1.dev0
00:46:37 Component: OMERO.server 5.6.3-594-e419881d2e-ice36-b75
00:46:37
00:46:37 Server: icegridnode running
00:46:37 Server: Blitz-0 active (pid = 85558, enabled)
00:46:37 Server: Indexer-0 activating (enabled)
00:46:37 Server: OMERO.Glacier2 active (pid = 85591, enabled)
00:46:37 Server: OMERO.IceStorm active (pid = 85621, enabled)
00:46:37 Server: Processor-0 active (pid = 85608, enabled)
00:46:37 Server: Tables-0 active (pid = 85619, enabled)
00:46:37
00:46:37 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
00:46:37 Log files: Blitz-0.log 33.1 KB errors=0 warnings=1
00:46:37 Log files: DropBox.log n/a
00:46:37 Log files: FileServer.log n/a
00:46:37 Log files: Indexer-0.log 598 B
00:46:37 Log files: MonitorServer.log n/a
00:46:37 Log files: Processor-0.log 735 B
00:46:37 Log files: Tables-0.log 961 B
00:46:37 Log files: TestDropBox.log n/a
00:46:37 Log files: master.err empty
00:46:37 Log files: master.out 30.5 KB
00:46:37 Log files: Total size 0.07 MB
00:46:37
00:46:37
00:46:37 Environment:OMERO_HOME=(unset)
00:46:37 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
00:46:37 Environment:OMERO_NODE=(unset)
00:46:37 Environment:OMERO_MASTER=(unset)
00:46:37 Environment:OMERO_USERDIR=(unset)
00:46:37 Environment:OMERO_TMPDIR=(unset)
00:46:37 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:37 Environment:PYTHONPATH=(unset)
00:46:37 Environment:ICE_HOME=/opt/ice-3.6.5
00:46:37 Environment:LD_LIBRARY_PATH=(unset)
00:46:37 Environment:DYLD_LIBRARY_PATH=(unset)
00:46:37
00:46:37 OMERO SSL port:4064
00:46:37 OMERO TCP port:4063
00:46:37 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
00:46:37 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
00:46:37
00:46:37 JVM settings: Blitz-${index} -Xmx7200m
00:46:37 JVM settings: Indexer-${index} -Xmx4800m
00:46:37 JVM settings: PixelData-${index} -Xmx7200m
00:46:37 JVM settings: Repository-${index} -Xmx4800m
00:46:37
00:46:37 Jar: lib/server/formats-api.jar Bio-Formats API 8.5.0-SNAPSHOT 9 March 2026 223ff3f7c390e4903ea23e7d84ee4213dadc7d1d
00:46:37 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.5.0-SNAPSHOT 9 March 2026 223ff3f7c390e4903ea23e7d84ee4213dadc7d1d
00:46:37 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.5.0-SNAPSHOT 9 March 2026 223ff3f7c390e4903ea23e7d84ee4213dadc7d1d
00:46:37 Jar: lib/server/ome-codecs.jar OME Codecs 1.1.4-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/ome-common.jar OME Common Java 6.2.2-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/ome-jai.jar OME JAI 0.1.6-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.5-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/ome-poi.jar OME POI 5.3.11-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/ome-xml.jar OME XML library 6.5.4-SNAPSHOT 9 March 2026 f95fbb357ef7ec3eba96faf1b000a39384b41d1e
00:46:37 Jar: lib/server/omero-blitz.jar jar 5.8.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-common.jar jar 5.7.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-gateway.jar jar 5.10.6-SNAPSHOT
00:46:37 Jar: lib/server/omero-model.jar jar 5.7.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-renderer.jar jar 5.6.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-romio.jar jar 5.8.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-server.jar jar 5.7.5-SNAPSHOT
00:46:37 Jar: lib/server/omero-zarr-pixel-buffer-0.6.2-SNAPSHOT.jar OMERO Zarr Pixel Buffer 0.6.2-SNAPSHOT 1fdcc95b647f19b57c77177919cc8b5513ed429d
00:46:38 + deactivate
00:46:38 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:46:38 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:46:38 + export PATH
00:46:38 + unset _OLD_VIRTUAL_PATH
00:46:38 + '[' -n '' ']'
00:46:38 + hash -r
00:46:38 + '[' -n '' ']'
00:46:38 + unset VIRTUAL_ENV
00:46:38 + unset VIRTUAL_ENV_PROMPT
00:46:38 + '[' '!' '' = nondestructive ']'
00:46:38 + unset -f deactivate
00:46:38 Finished: SUCCESS
