testMaskData

Exception omero.gateway.exception.DSAccessException

Message: Cannot access data. Could not add tableStacktrace:

at omero.gateway.facility.Facility.handleException(Facility.java:317)
at omero.gateway.facility.TablesFacility.addTable(TablesFacility.java:162)
at omero.gateway.facility.TablesFacility.addTable(TablesFacility.java:93)
at integration.gateway.TablesFacilityTest.testMaskData(TablesFacilityTest.java:306)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.testng.internal.invokers.MethodInvocationHelper.invokeMethod(MethodInvocationHelper.java:135)
at org.testng.internal.invokers.InvokeMethodRunnable.runOne(InvokeMethodRunnable.java:44)
at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:72)
at org.testng.internal.invokers.InvokeMethodRunnable.call(InvokeMethodRunnable.java:10)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: omero.InternalException
    serverStackTrace = "Traceback (most recent call last):
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/util/decorators.py", line 71, in exc_handler
                            rv = func(*args, **kwargs)
                                 ^^^^^^^^^^^^^^^^^^^^^
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/util/decorators.py", line 31, in handler
                            return func(*args, **kwargs)
                                   ^^^^^^^^^^^^^^^^^^^^^
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/tables.py", line 285, in addData
                            self.storage.append(cols)
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/util/decorators.py", line 96, in with_lock
                            return func(*args, **kwargs)
                                   ^^^^^^^^^^^^^^^^^^^^^
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/hdfstorageV2.py", line 85, in flush_after
                            return func(*args, **kwargs)
                                   ^^^^^^^^^^^^^^^^^^^^^
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/hdfstorageV2.py", line 514, in append
                            col.append(self.__mea)  # Potential corruption !!!
                            ^^^^^^^^^^^^^^^^^^^^^^
                          File "/home/omero/workspace/OMERO-test-integration/.venv3/lib64/python3.11/site-packages/omero/columns.py", line 543, in append
                            masks.append(numpy.fromstring(x, count=len(x),
                                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
                        ValueError: The binary mode of fromstring is removed, use frombuffer instead
                        "
    serverExceptionClass = ""
    message = "Internal exception"
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
at java.base/java.lang.Class.newInstance(Class.java:584)
at IceInternal.BasicStream.createUserException(BasicStream.java:2785)
at IceInternal.BasicStream.access$300(BasicStream.java:14)
at IceInternal.BasicStream$EncapsDecoder11.throwException(BasicStream.java:3620)
at IceInternal.BasicStream.throwException(BasicStream.java:2291)
at IceInternal.OutgoingAsync.throwUserException(OutgoingAsync.java:399)
at omero.grid.TablePrxHelper.end_addData(TablePrxHelper.java:360)
at omero.grid.TablePrxHelper.addData(TablePrxHelper.java:238)
at omero.grid.TablePrxHelper.addData(TablePrxHelper.java:225)
at omero.gateway.facility.TablesFacility.addTable(TablesFacility.java:139)
... 14 more