Failed
OmeroPy.test.integration.gatewaytest.test_annotation.testDualLinkedAnnotation (from pytest)
Error Message
failed on setup with "AttributeError: 'numpy.ndarray' object has no attribute 'tostring'"
Stacktrace
request = <SubRequest 'author_testimg_generated' for <Function testDualLinkedAnnotation>> gatewaywrapper = <omero.gateway.pytest_fixtures.GatewayWrapper object at 0x7fc4858eb910> @pytest.fixture(scope='function') def author_testimg_generated(request, gatewaywrapper): """ logs in as Author and returns the test image, creating it first if needed. """ gatewaywrapper.loginAsAuthor() > rv = gatewaywrapper.createTestImg_generated() ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/pytest_fixtures.py:51: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/pytest_fixtures.py:27: in createTestImg_generated testimg = self.createTestImage(dataset=ds) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/scripts/testdb_create.py:273: in createTestImage image = self.gateway.createImageFromNumpySeq( ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/__init__.py:3876: in createImageFromNumpySeq raise exc ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/__init__.py:3852: in createImageFromNumpySeq uploadPlane(plane, theZ, theC, theT, dtype) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ plane = array([[ 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0], [ 1, 1, 1, 1, 1, 1, 1, 1, 1, ..., 14, 14, 14, 14, 14, 14], [15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15, 15]], dtype=int16) z = 0, c = 0, t = 0, convertToType = None def uploadPlane(plane, z, c, t, convertToType): # if we're given a numpy dtype, need to convert plane to that dtype if convertToType is not None: p = numpy.zeros(plane.shape, dtype=convertToType) p += plane plane = p byteSwappedPlane = plane.byteswap() > convertedPlane = byteSwappedPlane.tostring() ^^^^^^^^^^^^^^^^^^^^^^^^^ E AttributeError: 'numpy.ndarray' object has no attribute 'tostring' ../../../../.venv3/lib64/python3.11/site-packages/omero/gateway/__init__.py:3833: AttributeError