00:48:17 Started by upstream project "Trigger" build number 593
00:48:17 originally caused by:
00:48:17 Started by timer
00:48:17 Running as SYSTEM
00:48:17 Building remotely on web (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-web
00:48:17 [OMERO-web] $ /bin/bash -xe /tmp/jenkins15187847444139536949.sh
00:48:17 + rm -rf /home/omero/workspace/OMERO-web/.venv3
00:48:18 + python3.11 -m venv /home/omero/workspace/OMERO-web/.venv3
00:48:22 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:48:22 ++ deactivate nondestructive
00:48:22 ++ '[' -n '' ']'
00:48:22 ++ '[' -n '' ']'
00:48:22 ++ hash -r
00:48:22 ++ '[' -n '' ']'
00:48:22 ++ unset VIRTUAL_ENV
00:48:22 ++ unset VIRTUAL_ENV_PROMPT
00:48:22 ++ '[' '!' nondestructive = nondestructive ']'
00:48:22 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:48:22 ++ export VIRTUAL_ENV
00:48:22 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:22 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:22 ++ export PATH
00:48:22 ++ '[' -n '' ']'
00:48:22 ++ '[' -z '' ']'
00:48:22 ++ _OLD_VIRTUAL_PS1=
00:48:22 ++ PS1='(.venv3) '
00:48:22 ++ export PS1
00:48:22 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:48:22 ++ export VIRTUAL_ENV_PROMPT
00:48:22 ++ hash -r
00:48:22 + pip install -U pip setuptools
00:48:22 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
00:48:22 Collecting pip
00:48:22 Using cached pip-25.2-py3-none-any.whl (1.8 MB)
00:48:22 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1)
00:48:23 Collecting setuptools
00:48:23 Using cached setuptools-80.9.0-py3-none-any.whl (1.2 MB)
00:48:23 Installing collected packages: setuptools, pip
00:48:23 Attempting uninstall: setuptools
00:48:23 Found existing installation: setuptools 65.5.1
00:48:23 Uninstalling setuptools-65.5.1:
00:48:23 Successfully uninstalled setuptools-65.5.1
00:48:24 Attempting uninstall: pip
00:48:24 Found existing installation: pip 22.3.1
00:48:24 Uninstalling pip-22.3.1:
00:48:24 Successfully uninstalled pip-22.3.1
00:48:25 Successfully installed pip-25.2 setuptools-80.9.0
00:48:25 WARNING: There was an error checking the latest version of pip.
00:48:25 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
00:48:26 Collecting zeroc-ice==3.6.5
00:48:26 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
00:48:28 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 23.3 MB/s 0:00:01
00:48:28 Installing collected packages: zeroc-ice
00:48:29 Successfully installed zeroc-ice-3.6.5
00:48:29 + pip install markdown
00:48:29 Collecting markdown
00:48:29 Using cached markdown-3.8.2-py3-none-any.whl.metadata (5.1 kB)
00:48:29 Using cached markdown-3.8.2-py3-none-any.whl (106 kB)
00:48:29 Installing collected packages: markdown
00:48:29 Successfully installed markdown-3.8.2
00:48:29 + pip install omero-py omero-web
00:48:30 Collecting omero-py
00:48:30 Using cached omero_py-5.21.0-py3-none-any.whl.metadata (6.5 kB)
00:48:30 Collecting omero-web
00:48:30 Using cached omero_web-5.29.2-py3-none-any.whl.metadata (8.2 kB)
00:48:30 Collecting urllib3<2 (from omero-py)
00:48:30 Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB)
00:48:30 Collecting appdirs (from omero-py)
00:48:30 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:48:30 Collecting future (from omero-py)
00:48:30 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:48:30 Collecting numpy<3 (from omero-py)
00:48:30 Using cached numpy-2.3.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
00:48:30 Collecting Pillow>=10.0.0 (from omero-py)
00:48:30 Using cached pillow-11.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
00:48:30 Collecting PyYAML (from omero-py)
00:48:30 Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
00:48:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
00:48:30 Collecting requests (from omero-py)
00:48:30 Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB)
00:48:30 Collecting portalocker (from omero-py)
00:48:30 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:48:30 Collecting concurrent-log-handler>=0.9.20 (from omero-web)
00:48:30 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
00:48:30 Collecting Django<4.3,>=4.2.3 (from omero-web)
00:48:31 Using cached django-4.2.23-py3-none-any.whl.metadata (4.2 kB)
00:48:31 Collecting django-pipeline (from omero-web)
00:48:31 Using cached django_pipeline-4.0.0-py3-none-any.whl.metadata (5.8 kB)
00:48:31 Collecting django-cors-headers==3.7.0 (from omero-web)
00:48:31 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:48:31 Collecting whitenoise>=5.3.0 (from omero-web)
00:48:31 Using cached whitenoise-6.9.0-py3-none-any.whl.metadata (3.6 kB)
00:48:31 Collecting gunicorn>=19.3 (from omero-web)
00:48:31 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
00:48:31 Collecting omero-marshal>=0.7.0 (from omero-web)
00:48:31 Using cached omero_marshal-0.9.0-py3-none-any.whl.metadata (2.2 kB)
00:48:31 Collecting pytz (from omero-web)
00:48:31 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
00:48:31 Collecting packaging (from omero-web)
00:48:31 Using cached packaging-25.0-py3-none-any.whl.metadata (3.3 kB)
00:48:31 Collecting importlib-resources (from omero-web)
00:48:31 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:48:31 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web)
00:48:31 Using cached asgiref-3.9.1-py3-none-any.whl.metadata (9.3 kB)
00:48:31 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web)
00:48:31 Using cached sqlparse-0.5.3-py3-none-any.whl.metadata (3.9 kB)
00:48:31 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web) (80.9.0)
00:48:31 Collecting wheel (from django-pipeline->omero-web)
00:48:31 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
00:48:31 Collecting charset_normalizer<4,>=2 (from requests->omero-py)
00:48:31 Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB)
00:48:31 Collecting idna<4,>=2.5 (from requests->omero-py)
00:48:31 Using cached idna-3.10-py3-none-any.whl.metadata (10 kB)
00:48:31 Collecting certifi>=2017.4.17 (from requests->omero-py)
00:48:31 Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB)
00:48:31 Using cached omero_py-5.21.0-py3-none-any.whl (2.8 MB)
00:48:31 Using cached numpy-2.3.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
00:48:31 Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB)
00:48:31 Using cached omero_web-5.29.2-py3-none-any.whl (2.8 MB)
00:48:31 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:48:31 Using cached django-4.2.23-py3-none-any.whl (8.0 MB)
00:48:31 Using cached asgiref-3.9.1-py3-none-any.whl (23 kB)
00:48:31 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
00:48:31 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
00:48:31 Using cached omero_marshal-0.9.0-py3-none-any.whl (88 kB)
00:48:31 Using cached pillow-11.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.6 MB)
00:48:31 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:48:31 Using cached sqlparse-0.5.3-py3-none-any.whl (44 kB)
00:48:31 Using cached whitenoise-6.9.0-py3-none-any.whl (20 kB)
00:48:31 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:48:31 Using cached django_pipeline-4.0.0-py3-none-any.whl (75 kB)
00:48:31 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:48:31 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:48:31 Using cached packaging-25.0-py3-none-any.whl (66 kB)
00:48:31 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
00:48:31 Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB)
00:48:31 Using cached requests-2.32.5-py3-none-any.whl (64 kB)
00:48:31 Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB)
00:48:31 Using cached idna-3.10-py3-none-any.whl (70 kB)
00:48:31 Using cached certifi-2025.8.3-py3-none-any.whl (161 kB)
00:48:31 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
00:48:32 Installing collected packages: pytz, appdirs, whitenoise, wheel, urllib3, sqlparse, PyYAML, portalocker, Pillow, packaging, omero-marshal, numpy, importlib-resources, idna, future, charset_normalizer, certifi, asgiref, requests, gunicorn, django-pipeline, Django, concurrent-log-handler, omero-py, django-cors-headers, omero-web
00:48:40
00:48:40 Successfully installed Django-4.2.23 Pillow-11.3.0 PyYAML-6.0.2 appdirs-1.4.4 asgiref-3.9.1 certifi-2025.8.3 charset_normalizer-3.4.3 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.0.0 future-1.0.0 gunicorn-23.0.0 idna-3.10 importlib-resources-6.5.2 numpy-2.3.2 omero-marshal-0.9.0 omero-py-5.21.0 omero-web-5.29.2 packaging-25.0 portalocker-3.2.0 pytz-2025.2 requests-2.32.5 sqlparse-0.5.3 urllib3-1.26.20 wheel-0.45.1 whitenoise-6.9.0
00:48:40 [OMERO-web] $ /bin/bash -xe /tmp/jenkins11950155637563862201.sh
00:48:40 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
00:48:40 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:48:40 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:48:40 + '[' -e /home/omero/workspace/OMERO-web/OMERO.web ']'
00:48:40 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:48:40 ++ deactivate nondestructive
00:48:40 ++ '[' -n '' ']'
00:48:40 ++ '[' -n '' ']'
00:48:40 ++ hash -r
00:48:40 ++ '[' -n '' ']'
00:48:40 ++ unset VIRTUAL_ENV
00:48:40 ++ unset VIRTUAL_ENV_PROMPT
00:48:40 ++ '[' '!' nondestructive = nondestructive ']'
00:48:40 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:48:40 ++ export VIRTUAL_ENV
00:48:40 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:40 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:40 ++ export PATH
00:48:40 ++ '[' -n '' ']'
00:48:40 ++ '[' -z '' ']'
00:48:40 ++ _OLD_VIRTUAL_PS1=
00:48:40 ++ PS1='(.venv3) '
00:48:40 ++ export PS1
00:48:40 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:48:40 ++ export VIRTUAL_ENV_PROMPT
00:48:40 ++ hash -r
00:48:40 + omero web stop
00:48:41 Stopping OMERO.web... [OK]
00:48:41 OMERO.web WSGI workers (PID 5244) killed.
00:48:41 Removed stale /home/omero/workspace/OMERO-web/OMERO.web/var/django.pid
00:48:41 + sleep 5
00:48:46 + echo 'Using kill to be extra careful'
00:48:46 Using kill to be extra careful
00:48:46 ++ ps aux -H
00:48:46 ++ grep python3
00:48:46 ++ grep -v grep
00:48:46 ++ cut -b 10-16
00:48:46 + omero web status
00:48:47 OMERO.web status... [NOT STARTED]
00:48:47 + deactivate
00:48:47 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:48:47 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:47 + export PATH
00:48:47 + unset _OLD_VIRTUAL_PATH
00:48:47 + '[' -n '' ']'
00:48:47 + hash -r
00:48:47 + '[' -n '' ']'
00:48:47 + unset VIRTUAL_ENV
00:48:47 + unset VIRTUAL_ENV_PROMPT
00:48:47 + '[' '!' '' = nondestructive ']'
00:48:47 + unset -f deactivate
00:48:47 + rm -rf /home/omero/static/web/
00:48:47 + rm -rf /home/omero/workspace/OMERO-web/omero-blitz-5.8.4-SNAPSHOT-python.zip /home/omero/workspace/OMERO-web/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero-iviewer /home/omero/workspace/OMERO-web/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_py-5.21.1.dev0.tar.gz /home/omero/workspace/OMERO-web/omero_scripts-5.9.2.dev0.tar.gz /home/omero/workspace/OMERO-web/OMERO.web /home/omero/workspace/OMERO-web/omero_web-5.29.3.dev0.tar.gz /home/omero/workspace/OMERO-web/version.properties
00:48:49 Copied 1 artifact from "OMERO-build" build number 501
00:48:49 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 494
00:48:49 Copied 2 artifacts from "OMERO-build-build" build number 528
00:48:50 [OMERO-web] $ /bin/bash -xe /tmp/jenkins8873261936816781.sh
00:48:50 + OMERO_DIST=/home/omero/workspace/OMERO-web/OMERO.web
00:48:50 + export OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:48:50 + OMERODIR=/home/omero/workspace/OMERO-web/OMERO.web
00:48:50 + export ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
00:48:50 + ZIP_FILE=/home/omero/workspace/OMERO-web/omero-blitz-VERSION-python.zip
00:48:50 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
00:48:50 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-web/version.properties
00:48:50 ++ ls OMERO.server-5.6.3-574-1444f3368a-ice36-b501.zip
00:48:50 + ZIP=OMERO.server-5.6.3-574-1444f3368a-ice36-b501.zip
00:48:50 + '[' '!' -z '' ']'
00:48:50 + DIST=OMERO.server-5.6.3-574-1444f3368a-ice36-b501
00:48:50 + unzip -n OMERO.server-5.6.3-574-1444f3368a-ice36-b501.zip
00:48:50 Archive: OMERO.server-5.6.3-574-1444f3368a-ice36-b501.zip
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/blitz/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/grid/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/profiles/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/templates/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/templates/error/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/etc/templates/grid/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/client/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/janelia/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/matplotlib/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/ncsa_paledit/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/seaborn/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/luts/wcif/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/analysis_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/annotation_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/export_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/figure_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/import_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/scripts/omero/util_scripts/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/lib/server/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/misc/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__1/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__10/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__11/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__2/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__3/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__4/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__5/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__6/
00:48:50 creating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__7/
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00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/django.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/dom4j.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/epl-v1.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/fbsd.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/freemarker.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/gpl-v2.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/gpl.txt
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00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/iconsweets_license.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/jamon.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/jmock.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/jquery.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/jtidy.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/lgpl-3.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/lgpl-v2.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/lgpl-v2.1.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/lgpl-v3.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/lgpl.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/matplotlib.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/mit.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/mpl-v1_0.htm
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/npl-1_1.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/path.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/pil.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/postgresql.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/psf-v2.0.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/psf-v2.5.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/scons.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/slf4j.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/tablelayout.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/which.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/zlib-libpng.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/share/licenses/zpl-v2.1.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/README.txt
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/misc/Makefile
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/misc/current.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/misc/enums.py
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__1/OMERO3__7.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__10/OMERO3A__9.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__11/OMERO3A__10.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__11/OMERO3A__5.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__2/OMERO3A__1.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__3/OMERO3A__2.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__3/OMERO3__5.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__4/OMERO3A__3.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__4/OMERO3__5.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__5/OMERO3A__4.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__6/OMERO3A__5.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__7/OMERO3A__6.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__8/OMERO3A__6.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3A__9/OMERO3A__8.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3__4/OMERO3__1.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3__5/OMERO3__4.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3__6/OMERO3__5.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO3__7/OMERO3__6.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.1__0/OMERO4__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO4__0/OMERO3A__11.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/psql-footer.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/psql-header.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/schema.sql
00:48:52 inflating: OMERO.server-5.6.3-574-1444f3368a-ice36-b501/sql/psql/OMERO5.4__0/views.sql
00:48:52 + rm -f OMERO.server-5.6.3-574-1444f3368a-ice36-b501.zip
00:48:52 + mv /home/omero/workspace/OMERO-web/OMERO.server-5.6.3-574-1444f3368a-ice36-b501 /home/omero/workspace/OMERO-web/OMERO.web
00:48:52 + source /home/omero/workspace/OMERO-web/.venv3/bin/activate
00:48:52 ++ deactivate nondestructive
00:48:52 ++ '[' -n '' ']'
00:48:52 ++ '[' -n '' ']'
00:48:52 ++ hash -r
00:48:52 ++ '[' -n '' ']'
00:48:52 ++ unset VIRTUAL_ENV
00:48:52 ++ unset VIRTUAL_ENV_PROMPT
00:48:52 ++ '[' '!' nondestructive = nondestructive ']'
00:48:52 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-web/.venv3
00:48:52 ++ export VIRTUAL_ENV
00:48:52 ++ _OLD_VIRTUAL_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:52 ++ PATH=/home/omero/workspace/OMERO-web/.venv3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:48:52 ++ export PATH
00:48:52 ++ '[' -n '' ']'
00:48:52 ++ '[' -z '' ']'
00:48:52 ++ _OLD_VIRTUAL_PS1=
00:48:52 ++ PS1='(.venv3) '
00:48:52 ++ export PS1
00:48:52 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:48:52 ++ export VIRTUAL_ENV_PROMPT
00:48:52 ++ hash -r
00:48:52 + source /home/settings.env
00:48:52 ++ OMERO_WEB_PORT=80
00:48:52 ++ OMERO_DATA_DIR=/OMERO
00:48:52 ++ export OMERO_WEB_PORT OMERO_DATA_DIR
00:48:52 + for x in *.tar.gz
00:48:52 + pip install omero_dropbox-5.7.1.dev0.tar.gz
00:48:52 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:48:52 Preparing metadata (setup.py): started
00:48:53 Preparing metadata (setup.py): finished with status 'done'
00:48:53 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.21.0)
00:48:53 Requirement already satisfied: urllib3<2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.26.20)
00:48:53 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
00:48:53 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
00:48:53 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.3.2)
00:48:53 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (11.3.0)
00:48:53 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.2)
00:48:53 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:48:53 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
00:48:53 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
00:48:53 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.3)
00:48:53 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.10)
00:48:53 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2025.8.3)
00:48:53 Building wheels for collected packages: omero-dropbox
00:48:53 DEPRECATION: Building 'omero-dropbox' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-dropbox'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:48:53 Building wheel for omero-dropbox (setup.py): started
00:48:53 Building wheel for omero-dropbox (setup.py): finished with status 'done'
00:48:53 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=83f33e864703cd6934ae4b687dd747a021f20f7bbbd89121ad39a4063f53a754
00:48:53 Stored in directory: /home/omero/.cache/pip/wheels/55/98/08/ff7c1fca67f8fa693d22026e35ef8e3a1f9538aa487f7b0a6d
00:48:53 Successfully built omero-dropbox
00:48:53 Installing collected packages: omero-dropbox
00:48:53 Successfully installed omero-dropbox-5.7.1.dev0
00:48:53 + for x in *.tar.gz
00:48:53 + pip install omero_marshal-0.9.1.dev0.tar.gz
00:48:53 Processing ./omero_marshal-0.9.1.dev0.tar.gz
00:48:53 Preparing metadata (setup.py): started
00:48:54 Preparing metadata (setup.py): finished with status 'done'
00:48:54 Building wheels for collected packages: omero_marshal
00:48:54 DEPRECATION: Building 'omero_marshal' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero_marshal'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:48:54 Building wheel for omero_marshal (setup.py): started
00:48:54 Building wheel for omero_marshal (setup.py): finished with status 'done'
00:48:54 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88126 sha256=4e36161c66fd8b38791f1f95a0031e5c65a67d9ae845fab20c02b0a222ddf49f
00:48:54 Stored in directory: /home/omero/.cache/pip/wheels/82/1e/14/e0e08f959523673923f64b8e169d4add2683025e4e9405ae63
00:48:54 Successfully built omero_marshal
00:48:54 Installing collected packages: omero_marshal
00:48:54 Attempting uninstall: omero_marshal
00:48:54 Found existing installation: omero-marshal 0.9.0
00:48:54 Uninstalling omero-marshal-0.9.0:
00:48:54 Successfully uninstalled omero-marshal-0.9.0
00:48:54 Successfully installed omero_marshal-0.9.1.dev0
00:48:54 + for x in *.tar.gz
00:48:54 + pip install omero_py-5.21.1.dev0.tar.gz
00:48:55 Processing ./omero_py-5.21.1.dev0.tar.gz
00:48:55 Preparing metadata (setup.py): started
00:48:55 Preparing metadata (setup.py): finished with status 'done'
00:48:55 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (1.4.4)
00:48:55 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (1.0.0)
00:48:55 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (2.3.2)
00:48:55 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (11.3.0)
00:48:55 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (6.0.2)
00:48:55 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (3.6.5)
00:48:55 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (2.32.5)
00:48:55 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.21.0) (3.2.0)
00:48:55 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.0) (3.4.3)
00:48:55 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.0) (3.10)
00:48:55 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.0) (1.26.20)
00:48:55 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.21.0) (2025.8.3)
00:48:55 Building wheels for collected packages: omero-py
00:48:55 DEPRECATION: Building 'omero-py' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-py'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:48:55 Building wheel for omero-py (setup.py): started
00:48:56 Building wheel for omero-py (setup.py): finished with status 'done'
00:48:56 Created wheel for omero-py: filename=omero_py-5.21.0-py3-none-any.whl size=2783383 sha256=4b382b7a2a7f9eb0a0682a80e1e1b027748179a55d8e4b8dd69227cff43e3622
00:48:56 Stored in directory: /home/omero/.cache/pip/wheels/31/44/96/f3cbd3f1764aac0b72b1c0e03b3b993a08676e330acfeae840
00:48:56 Successfully built omero-py
00:48:56 Installing collected packages: omero-py
00:48:56 Attempting uninstall: omero-py
00:48:56 Found existing installation: omero-py 5.21.0
00:48:56 Uninstalling omero-py-5.21.0:
00:48:57 Successfully uninstalled omero-py-5.21.0
00:48:59 Successfully installed omero-py-5.21.0
00:48:59 + for x in *.tar.gz
00:48:59 + pip install omero_scripts-5.9.2.dev0.tar.gz
00:48:59 Processing ./omero_scripts-5.9.2.dev0.tar.gz
00:48:59 Preparing metadata (setup.py): started
00:48:59 Preparing metadata (setup.py): finished with status 'done'
00:48:59 Building wheels for collected packages: omero-scripts
00:48:59 DEPRECATION: Building 'omero-scripts' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-scripts'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:48:59 Building wheel for omero-scripts (setup.py): started
00:49:00 Building wheel for omero-scripts (setup.py): finished with status 'done'
00:49:00 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136847 sha256=752ed8381cd225bc165193847891818d1aa81c448c0aa56a91338bc20d32d9e9
00:49:00 Stored in directory: /home/omero/.cache/pip/wheels/86/b3/75/b111c3c4249371a905344b09a70c7d582dfc940a567f160dfd
00:49:00 Successfully built omero-scripts
00:49:00 Installing collected packages: omero-scripts
00:49:00 Successfully installed omero-scripts-5.9.2.dev0
00:49:00 + for x in *.tar.gz
00:49:00 + pip install omero_web-5.29.3.dev0.tar.gz
00:49:00 Processing ./omero_web-5.29.3.dev0.tar.gz
00:49:01 Preparing metadata (setup.py): started
00:49:01 Preparing metadata (setup.py): finished with status 'done'
00:49:01 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (5.21.0)
00:49:01 Requirement already satisfied: concurrent-log-handler>=0.9.20 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.28)
00:49:01 Requirement already satisfied: Django<4.3,>=4.2.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (4.2.23)
00:49:01 Requirement already satisfied: django-pipeline in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (4.0.0)
00:49:01 Requirement already satisfied: django-cors-headers==3.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.7.0)
00:49:01 Collecting django-csp (from omero-web==5.29.3.dev0)
00:49:01 Using cached django_csp-4.0-py3-none-any.whl.metadata (3.6 kB)
00:49:01 Requirement already satisfied: whitenoise>=5.3.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.9.0)
00:49:01 Requirement already satisfied: gunicorn>=19.3 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (23.0.0)
00:49:01 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (0.9.1.dev0)
00:49:01 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (11.3.0)
00:49:01 Requirement already satisfied: pytz in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (2025.2)
00:49:01 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (3.2.0)
00:49:01 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (25.0)
00:49:01 Requirement already satisfied: importlib-resources in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.29.3.dev0) (6.5.2)
00:49:01 Requirement already satisfied: asgiref<4,>=3.6.0 in ./.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web==5.29.3.dev0) (3.9.1)
00:49:01 Requirement already satisfied: sqlparse>=0.3.1 in ./.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web==5.29.3.dev0) (0.5.3)
00:49:01 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.4.4)
00:49:01 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.0.0)
00:49:01 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.3.2)
00:49:01 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (6.0.2)
00:49:01 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.6.5)
00:49:01 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.29.3.dev0) (2.32.5)
00:49:01 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (80.9.0)
00:49:01 Requirement already satisfied: wheel in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.29.3.dev0) (0.45.1)
00:49:01 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.4.3)
00:49:01 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (3.10)
00:49:01 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (1.26.20)
00:49:01 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.29.3.dev0) (2025.8.3)
00:49:01 Using cached django_csp-4.0-py3-none-any.whl (25 kB)
00:49:01 Building wheels for collected packages: omero-web
00:49:01 DEPRECATION: Building 'omero-web' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:49:01 Building wheel for omero-web (setup.py): started
00:49:02 Building wheel for omero-web (setup.py): finished with status 'done'
00:49:02 Created wheel for omero-web: filename=omero_web-5.29.3.dev0-py3-none-any.whl size=2817942 sha256=8f4b50a811a5e63c0f89d42e7898a0b845312d0e518ca69a58076a879c9fba99
00:49:02 Stored in directory: /home/omero/.cache/pip/wheels/e9/ae/d2/71adfd8a08e6ad7ee0a2832047bcf8cd0b1ad51f4acb81244d
00:49:02 Successfully built omero-web
00:49:02 Installing collected packages: django-csp, omero-web
00:49:02 Attempting uninstall: omero-web
00:49:02 Found existing installation: omero-web 5.29.2
00:49:02 Uninstalling omero-web-5.29.2:
00:49:02 Successfully uninstalled omero-web-5.29.2
00:49:03
00:49:03 Successfully installed django-csp-4.0 omero-web-5.29.3.dev0
00:49:03 + pip install build
00:49:03 Collecting build
00:49:03 Using cached build-1.3.0-py3-none-any.whl.metadata (5.6 kB)
00:49:03 Requirement already satisfied: packaging>=19.1 in ./.venv3/lib64/python3.11/site-packages (from build) (25.0)
00:49:03 Collecting pyproject_hooks (from build)
00:49:03 Using cached pyproject_hooks-1.2.0-py3-none-any.whl.metadata (1.3 kB)
00:49:03 Using cached build-1.3.0-py3-none-any.whl (23 kB)
00:49:03 Using cached pyproject_hooks-1.2.0-py3-none-any.whl (10 kB)
00:49:03 Installing collected packages: pyproject_hooks, build
00:49:03
00:49:03 Successfully installed build-1.3.0 pyproject_hooks-1.2.0
00:49:03 + omero config set omero.web.application_server wsgi-tcp
00:49:04 + omero config set omero.web.application_server.max_requests 0
00:49:05 + omero config set omero.web.prefix /web
00:49:06 + omero config set omero.web.static_url /web/static/
00:49:07 + omero config set omero.web.static_root /home/omero/static/web/
00:49:08 + omero config set omero.web.session_engine django.contrib.sessions.backends.cache
00:49:09 + omero config set omero.web.caches '{"default": {"BACKEND": "django_redis.cache.RedisCache","LOCATION": "redis://redis:6379/0"}}'
00:49:10 + omero config set omero.web.server_list '[["omero", 4064, "omero"], ["testintegration", 14064, "testintegration"], ["134.36.6.39", 4064, "nightshade"]]'
00:49:10 + omero config set omero.web.application_server.host web
00:49:11 + omero config set omero.web.application_server.port 4080
00:49:12 + omero web config nginx --http 80
00:49:13 + sudo cp /home/omero/workspace/OMERO-web/OMERO.web/nginx.conf.tmp /home/omero/nginx/web.conf
00:49:13 + omero config set omero.web.wsgi_args -- '--log-level=DEBUG --error-logfile=/home/omero/workspace/OMERO-web/OMERO.web/var/log/gunicorn.err'
00:49:14 + omero config set omero.web.application_server.host 0.0.0.0
00:49:15 + git clone -b merge_ci https://github.com/snoopycrimecop/omero-iviewer.git
00:49:15 Cloning into 'omero-iviewer'...
00:49:17 + cd omero-iviewer/plugin
00:49:17 + python -m build
00:49:17 * Creating isolated environment: venv+pip...
00:49:17 * Installing packages in isolated environment:
00:49:18 - setuptools >= 40.8.0
00:49:18 * Getting build dependencies for sdist...
00:49:18 /tmp/build-env-ehsrtvn9/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
00:49:18 self.metadata.version = self._normalize_version(self.metadata.version)
00:49:18 running egg_info
00:49:18 creating omero_iviewer.egg-info
00:49:18 writing omero_iviewer.egg-info/PKG-INFO
00:49:18 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:49:18 writing requirements to omero_iviewer.egg-info/requires.txt
00:49:18 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:49:18 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:49:18 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:49:18 reading manifest template 'MANIFEST.in'
00:49:18 adding license file 'LICENSE'
00:49:18 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:49:18 * Building sdist...
00:49:18 /tmp/build-env-ehsrtvn9/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
00:49:18 self.metadata.version = self._normalize_version(self.metadata.version)
00:49:18 running sdist
00:49:18 running run_prod
00:49:18 npm run prod
00:49:18
00:49:18 > prod
00:49:18 > ./prepare_build.sh && webpack --config webpack.prod.config.js --progress && ./deploy_build.sh
00:49:18
00:49:18 Preparing build. You are going to need npm at a minimum
00:49:18 Fetching dependencies needed for build...
00:49:21 npm warn deprecated glob@8.1.0: Glob versions prior to v9 are no longer supported
00:49:21 npm warn deprecated babel-eslint@7.2.3: babel-eslint is now @babel/eslint-parser. This package will no longer receive updates.
00:49:22 npm warn deprecated text-encoding@0.6.4: no longer maintained
00:49:23 npm warn deprecated core-js-pure@3.1.4: core-js-pure@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js-pure.
00:49:23 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
00:49:23 npm warn deprecated core-js@2.6.9: core-js@<3.23.3 is no longer maintained and not recommended for usage due to the number of issues. Because of the V8 engine whims, feature detection in old core-js versions could cause a slowdown up to 100x even if nothing is polyfilled. Some versions have web compatibility issues. Please, upgrade your dependencies to the actual version of core-js.
00:49:25
00:49:25 added 887 packages, and audited 888 packages in 7s
00:49:25
00:49:25 82 packages are looking for funding
00:49:25 run `npm fund` for details
00:49:25
00:49:25 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
00:49:25
00:49:25 To address issues that do not require attention, run:
00:49:25 npm audit fix
00:49:25
00:49:25 To address all issues (including breaking changes), run:
00:49:25 npm audit fix --force
00:49:25
00:49:25 Run `npm audit` for details.
00:49:25 Erasing build/deploy directories...
00:49:25 Recreating build/deploy directories...
00:49:25 Buildfile: /home/omero/workspace/OMERO-web/omero-iviewer/build.xml
00:49:25
00:49:25 clean-css-dir:
00:49:25 [mkdir] Created dir: /home/omero/workspace/OMERO-web/omero-iviewer/build/css
00:49:25
00:49:25 copy-images:
00:49:25 [copy] Copying 35 files to /home/omero/workspace/OMERO-web/omero-iviewer/build/css/images
00:49:25
00:49:25 prepare-css-prod:
00:49:25 [echo] Combine and minify css...
00:49:27 [exec]
00:49:27 [exec] up to date, audited 888 packages in 2s
00:49:27 [exec]
00:49:27 [exec] 82 packages are looking for funding
00:49:27 [exec] run `npm fund` for details
00:49:27 [exec]
00:49:27 [exec] 31 vulnerabilities (7 low, 5 moderate, 11 high, 8 critical)
00:49:27 [exec]
00:49:27 [exec] To address issues that do not require attention, run:
00:49:27 [exec] npm audit fix
00:49:27 [exec]
00:49:27 [exec] To address all issues (including breaking changes), run:
00:49:27 [exec] npm audit fix --force
00:49:27 [exec]
00:49:27 [exec] Run `npm audit` for details.
00:49:28
00:49:28 BUILD SUCCESSFUL
00:49:28 Total time: 2 seconds
00:49:28 <s> [webpack.Progress] 0%
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00:49:29 Browserslist: browsers data (caniuse-lite) is 10 months old. Please run:
00:49:29 npx update-browserslist-db@latest
00:49:29 Why you should do it regularly: https://github.com/browserslist/update-db#readme
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00:49:30 [BABEL] Note: The code generator has deoptimised the styling of /home/omero/workspace/OMERO-web/omero-iviewer/node_modules/text-encoding/lib/encoding-indexes.js as it exceeds the max of 500KB.
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00:50:00
00:50:00 assets by path css/ 229 KiB
00:50:00 assets by chunk 189 KiB (auxiliary name: vendors)
00:50:00 assets by path css/*.css 153 KiB 5 assets
00:50:00 assets by path css/images/*.png 12.8 KiB
00:50:00 asset css/images/ui-icons_555555_256x240.png 3.2 KiB [emitted] [from: node_modules/jquery-ui/themes/base/images/ui-icons_555555_256x240.png] (auxiliary name: vendors) (auxiliary id hint: commons)
00:50:00 + 3 assets
00:50:00 asset css/fonts/glyphicons-halflings-regular.woff 22.9 KiB [emitted] [from: node_modules/bootstrap/fonts/glyphicons-halflings-regular.woff] (auxiliary name: vendors) (auxiliary id hint: commons)
00:50:00 assets by chunk 40.4 KiB (auxiliary name: main)
00:50:00 asset css/app.css 30.4 KiB [emitted] [from: css/app.css] (auxiliary name: main)
00:50:00 asset css/ol3-viewer.css 9.99 KiB [emitted] [from: css/ol3-viewer.css] (auxiliary name: main)
00:50:00 assets by path *.js 2.05 MiB
00:50:00 asset vendors.js 1.57 MiB [emitted] [minimized] [big] (name: vendors) (id hint: commons) 1 related asset
00:50:00 asset main.js 494 KiB [emitted] [minimized] [big] (name: main)
00:50:00 asset deps.js 2.29 KiB [emitted] [minimized] (name: deps)
00:50:00 Entrypoint main [big] 2.05 MiB (229 KiB) = vendors.js 1.57 MiB main.js 494 KiB 12 auxiliary assets
00:50:00 Entrypoint deps [big] 1.57 MiB (189 KiB) = vendors.js 1.57 MiB deps.js 2.29 KiB 10 auxiliary assets
00:50:00 orphan modules 954 KiB [orphan] 549 modules
00:50:00 runtime modules 10.3 KiB 26 modules
00:50:00 cacheable modules 5.1 MiB
00:50:00 modules by path ./node_modules/ 3.91 MiB 325 modules
00:50:00 modules by path ./src/ 1.19 MiB 66 modules
00:50:00 modules by path ./css/*.css 117 bytes
00:50:00 ./css/ol3-viewer.css 62 bytes [built] [code generated]
00:50:00 ./css/app.css 55 bytes [built] [code generated]
00:50:00
00:50:00 WARNING in configuration
00:50:00 The 'mode' option has not been set, webpack will fallback to 'production' for this value.
00:50:00 Set 'mode' option to 'development' or 'production' to enable defaults for each environment.
00:50:00 You can also set it to 'none' to disable any default behavior. Learn more: https://webpack.js.org/configuration/mode/
00:50:00
00:50:00 webpack 5.96.1 compiled with 1 warning in 31747 ms
00:50:00 Deploying built resources to plugin directory...
00:50:00 rm -rf ../node_modules
00:50:01 running egg_info
00:50:01 creating omero_iviewer.egg-info
00:50:01 writing omero_iviewer.egg-info/PKG-INFO
00:50:01 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:50:01 writing requirements to omero_iviewer.egg-info/requires.txt
00:50:01 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:50:01 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:01 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:01 reading manifest template 'MANIFEST.in'
00:50:01 adding license file 'LICENSE'
00:50:01 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:01 warning: Sdist: standard file not found: should have one of README, README.rst, README.txt, README.md
00:50:01
00:50:01 running check
00:50:01 creating omero_iviewer-0.16.0.dev0
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:01 creating omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
00:50:01 copying files to omero_iviewer-0.16.0.dev0...
00:50:01 copying LICENSE -> omero_iviewer-0.16.0.dev0
00:50:01 copying MANIFEST.in -> omero_iviewer-0.16.0.dev0
00:50:01 copying setup.cfg -> omero_iviewer-0.16.0.dev0
00:50:01 copying setup.py -> omero_iviewer-0.16.0.dev0
00:50:01 copying omero_iviewer/README.rst -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/__init__.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/apps.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/iviewer_settings.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/urls.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/utils.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/version.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer/views.py -> omero_iviewer-0.16.0.dev0/omero_iviewer
00:50:01 copying omero_iviewer.egg-info/PKG-INFO -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer.egg-info/dependency_links.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer.egg-info/not-zip-safe -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer.egg-info/requires.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer.egg-info/top_level.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:01 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
00:50:01 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
00:50:01 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> omero_iviewer-0.16.0.dev0/omero_iviewer/__pycache__
00:50:01 copying omero_iviewer/static/omero_iviewer/deps.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:01 copying omero_iviewer/static/omero_iviewer/main.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:01 copying omero_iviewer/static/omero_iviewer/openwith.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:01 copying omero_iviewer/static/omero_iviewer/vendors.js -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:02 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer
00:50:02 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/app.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/slider.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/theme.css -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css
00:50:02 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/fonts
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> omero_iviewer-0.16.0.dev0/omero_iviewer/static/omero_iviewer/css/images
00:50:02 copying omero_iviewer/templates/omero_iviewer/index.html -> omero_iviewer-0.16.0.dev0/omero_iviewer/templates/omero_iviewer
00:50:02 copying omero_iviewer.egg-info/SOURCES.txt -> omero_iviewer-0.16.0.dev0/omero_iviewer.egg-info
00:50:02 Writing omero_iviewer-0.16.0.dev0/setup.cfg
00:50:02 creating /home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-3ki6i4_p
00:50:02 Creating tar archive
00:50:02 removing 'omero_iviewer-0.16.0.dev0' (and everything under it)
00:50:02 * Building wheel from sdist
00:50:02 * Creating isolated environment: venv+pip...
00:50:02 * Installing packages in isolated environment:
00:50:03 - setuptools >= 40.8.0
00:50:03 * Getting build dependencies for wheel...
00:50:03 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
00:50:03 self.metadata.version = self._normalize_version(self.metadata.version)
00:50:03 running egg_info
00:50:03 writing omero_iviewer.egg-info/PKG-INFO
00:50:03 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:50:03 writing requirements to omero_iviewer.egg-info/requires.txt
00:50:03 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:50:03 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:03 reading manifest template 'MANIFEST.in'
00:50:03 adding license file 'LICENSE'
00:50:03 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:03 * Building wheel...
00:50:03 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/dist.py:332: InformationOnly: Normalizing '0.16.0dev' to '0.16.0.dev0'
00:50:03 self.metadata.version = self._normalize_version(self.metadata.version)
00:50:03 running bdist_wheel
00:50:04 running build
00:50:04 running build_py
00:50:04 creating build/lib/omero_iviewer
00:50:04 copying omero_iviewer/__init__.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/apps.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/iviewer_settings.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/urls.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/utils.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/version.py -> build/lib/omero_iviewer
00:50:04 copying omero_iviewer/views.py -> build/lib/omero_iviewer
00:50:04 running egg_info
00:50:04 writing omero_iviewer.egg-info/PKG-INFO
00:50:04 writing dependency_links to omero_iviewer.egg-info/dependency_links.txt
00:50:04 writing requirements to omero_iviewer.egg-info/requires.txt
00:50:04 writing top-level names to omero_iviewer.egg-info/top_level.txt
00:50:04 reading manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:04 reading manifest template 'MANIFEST.in'
00:50:04 adding license file 'LICENSE'
00:50:04 writing manifest file 'omero_iviewer.egg-info/SOURCES.txt'
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.__pycache__' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.__pycache__' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.__pycache__' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.__pycache__' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.__pycache__' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.static.omero_iviewer' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.static.omero_iviewer' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.static.omero_iviewer' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.static.omero_iviewer' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.static.omero_iviewer.css' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.static.omero_iviewer.css' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.static.omero_iviewer.css' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.fonts' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.static.omero_iviewer.css.fonts' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.fonts' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.static.omero_iviewer.css.fonts' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.fonts' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.static.omero_iviewer.css.images' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.static.omero_iviewer.css.images' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.static.omero_iviewer.css.images' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.static.omero_iviewer.css.images' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.static.omero_iviewer.css.images' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 /tmp/build-env-478wfzam/lib64/python3.11/site-packages/setuptools/command/build_py.py:212: _Warning: Package 'omero_iviewer.templates.omero_iviewer' is absent from the `packages` configuration.
00:50:04 !!
00:50:04
00:50:04 ********************************************************************************
00:50:04 ############################
00:50:04 # Package would be ignored #
00:50:04 ############################
00:50:04 Python recognizes 'omero_iviewer.templates.omero_iviewer' as an importable package[^1],
00:50:04 but it is absent from setuptools' `packages` configuration.
00:50:04
00:50:04 This leads to an ambiguous overall configuration. If you want to distribute this
00:50:04 package, please make sure that 'omero_iviewer.templates.omero_iviewer' is explicitly added
00:50:04 to the `packages` configuration field.
00:50:04
00:50:04 Alternatively, you can also rely on setuptools' discovery methods
00:50:04 (for example by using `find_namespace_packages(...)`/`find_namespace:`
00:50:04 instead of `find_packages(...)`/`find:`).
00:50:04
00:50:04 You can read more about "package discovery" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
00:50:04
00:50:04 If you don't want 'omero_iviewer.templates.omero_iviewer' to be distributed and are
00:50:04 already explicitly excluding 'omero_iviewer.templates.omero_iviewer' via
00:50:04 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
00:50:04 you can try to use `exclude_package_data`, or `include-package-data=False` in
00:50:04 combination with a more fine grained `package-data` configuration.
00:50:04
00:50:04 You can read more about "package data files" on setuptools documentation page:
00:50:04
00:50:04 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
00:50:04
00:50:04
00:50:04 [^1]: For Python, any directory (with suitable naming) can be imported,
00:50:04 even if it does not contain any `.py` files.
00:50:04 On the other hand, currently there is no concept of package data
00:50:04 directory, all directories are treated like packages.
00:50:04 ********************************************************************************
00:50:04
00:50:04 !!
00:50:04 check.warn(importable)
00:50:04 copying omero_iviewer/README.rst -> build/lib/omero_iviewer
00:50:04 creating build/lib/omero_iviewer/__pycache__
00:50:04 copying omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:50:04 copying omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:50:04 copying omero_iviewer/__pycache__/version.cpython-311.pyc -> build/lib/omero_iviewer/__pycache__
00:50:04 creating build/lib/omero_iviewer/static/omero_iviewer
00:50:04 copying omero_iviewer/static/omero_iviewer/deps.js -> build/lib/omero_iviewer/static/omero_iviewer
00:50:04 copying omero_iviewer/static/omero_iviewer/main.js -> build/lib/omero_iviewer/static/omero_iviewer
00:50:04 copying omero_iviewer/static/omero_iviewer/openwith.js -> build/lib/omero_iviewer/static/omero_iviewer
00:50:04 copying omero_iviewer/static/omero_iviewer/vendors.js -> build/lib/omero_iviewer/static/omero_iviewer
00:50:04 copying omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/lib/omero_iviewer/static/omero_iviewer
00:50:04 creating build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/all.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/app.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/slider.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/spinner.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 copying omero_iviewer/static/omero_iviewer/css/theme.css -> build/lib/omero_iviewer/static/omero_iviewer/css
00:50:04 creating build/lib/omero_iviewer/static/omero_iviewer/css/fonts
00:50:04 copying omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/lib/omero_iviewer/static/omero_iviewer/css/fonts
00:50:04 creating build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/label.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/line.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/link.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/point.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/select.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/lib/omero_iviewer/static/omero_iviewer/css/images
00:50:04 creating build/lib/omero_iviewer/templates/omero_iviewer
00:50:04 copying omero_iviewer/templates/omero_iviewer/index.html -> build/lib/omero_iviewer/templates/omero_iviewer
00:50:04 installing to build/bdist.linux-x86_64/wheel
00:50:04 running install
00:50:04 running install_lib
00:50:04 creating build/bdist.linux-x86_64/wheel
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/__init__.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/apps.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/iviewer_settings.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/urls.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/utils.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/version.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/views.py -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 copying build/lib/omero_iviewer/README.rst -> build/bdist.linux-x86_64/wheel/./omero_iviewer
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/__pycache__
00:50:04 copying build/lib/omero_iviewer/__pycache__/__init__.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:50:04 copying build/lib/omero_iviewer/__pycache__/utils.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:50:04 copying build/lib/omero_iviewer/__pycache__/version.cpython-311.pyc -> build/bdist.linux-x86_64/wheel/./omero_iviewer/__pycache__
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/deps.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/main.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/openwith.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/all.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/app.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/bootstrap.min.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/ol3-viewer.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/slider.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/spectrum.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/spinner.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/theme.css -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/fonts
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/fonts
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-left.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse-right.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/collapse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_locked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/drag_handle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ellipse.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/expand.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/gradient.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/label.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/line.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/link.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/mask.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/point.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polygon.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/polyline.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/projection.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/rectangle.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/select.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sortable.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 copying build/lib/omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png -> build/bdist.linux-x86_64/wheel/./omero_iviewer/static/omero_iviewer/css/images
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer/templates/omero_iviewer
00:50:04 copying build/lib/omero_iviewer/templates/omero_iviewer/index.html -> build/bdist.linux-x86_64/wheel/./omero_iviewer/templates/omero_iviewer
00:50:04 running install_egg_info
00:50:04 Copying omero_iviewer.egg-info to build/bdist.linux-x86_64/wheel/./omero_iviewer-0.16.0.dev0-py3.11.egg-info
00:50:04 running install_scripts
00:50:04 creating build/bdist.linux-x86_64/wheel/omero_iviewer-0.16.0.dev0.dist-info/WHEEL
00:50:04 creating '/home/omero/workspace/OMERO-web/omero-iviewer/plugin/dist/.tmp-8emn4kyd/omero_iviewer-0.16.0.dev0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
00:50:04 adding 'omero_iviewer/README.rst'
00:50:04 adding 'omero_iviewer/__init__.py'
00:50:04 adding 'omero_iviewer/apps.py'
00:50:04 adding 'omero_iviewer/iviewer_settings.py'
00:50:04 adding 'omero_iviewer/urls.py'
00:50:04 adding 'omero_iviewer/utils.py'
00:50:04 adding 'omero_iviewer/version.py'
00:50:04 adding 'omero_iviewer/views.py'
00:50:04 adding 'omero_iviewer/__pycache__/__init__.cpython-311.pyc'
00:50:04 adding 'omero_iviewer/__pycache__/utils.cpython-311.pyc'
00:50:04 adding 'omero_iviewer/__pycache__/version.cpython-311.pyc'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/deps.js'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/main.js'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/openwith.js'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/vendors.js'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/vendors.js.LICENSE.txt'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/all.min.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/app.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/bootstrap.min.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/ol3-viewer.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/slider.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/spectrum.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/spinner.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/theme.css'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/fonts/glyphicons-halflings-regular.woff'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/arrow_arrow.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/arrows_dropdown.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-left.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse-right.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/collapse.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/crosshair_filled.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_locked.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/dim_unlocked.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/drag_handle.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_arrow.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_ellipse.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_label.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_line.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_point.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polygon.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_polyline.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/draw_rectangle.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/ellipse.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/expand.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/gradient.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/label.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/line.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/link.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/mask.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/point.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/polygon.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/polyline.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/projection.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/rectangle.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/select.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/sortable.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-asc.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/sorted-desc.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_444444_256x240.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_555555_256x240.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_777777_256x240.png'
00:50:04 adding 'omero_iviewer/static/omero_iviewer/css/images/ui-icons_ffffff_256x240.png'
00:50:04 adding 'omero_iviewer/templates/omero_iviewer/index.html'
00:50:04 adding 'omero_iviewer-0.16.0.dev0.dist-info/licenses/LICENSE'
00:50:04 adding 'omero_iviewer-0.16.0.dev0.dist-info/METADATA'
00:50:04 adding 'omero_iviewer-0.16.0.dev0.dist-info/WHEEL'
00:50:04 adding 'omero_iviewer-0.16.0.dev0.dist-info/top_level.txt'
00:50:04 adding 'omero_iviewer-0.16.0.dev0.dist-info/RECORD'
00:50:04 removing build/bdist.linux-x86_64/wheel
00:50:04 Successfully built omero_iviewer-0.16.0.dev0.tar.gz and omero_iviewer-0.16.0.dev0-py3-none-any.whl
00:50:04 + cd dist
00:50:04 + for x in *.tar.gz
00:50:04 + pip install -U omero_iviewer-0.16.0.dev0.tar.gz
00:50:04 Processing ./omero_iviewer-0.16.0.dev0.tar.gz
00:50:04 Preparing metadata (setup.py): started
00:50:04 Preparing metadata (setup.py): finished with status 'done'
00:50:04 Requirement already satisfied: omero-web>=5.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-iviewer==0.16.0.dev0) (5.29.3.dev0)
00:50:04 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (5.21.0)
00:50:04 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.28)
00:50:04 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.2.23)
00:50:04 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0.0)
00:50:04 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.7.0)
00:50:04 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (4.0)
00:50:04 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.9.0)
00:50:04 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (23.0.0)
00:50:04 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.9.1.dev0)
00:50:04 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (11.3.0)
00:50:04 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.2)
00:50:04 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.2.0)
00:50:04 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (25.0)
00:50:04 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.5.2)
00:50:04 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.9.1)
00:50:04 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.5.3)
00:50:04 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.4.4)
00:50:04 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.0.0)
00:50:04 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.3.2)
00:50:04 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (6.0.2)
00:50:04 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.6.5)
00:50:04 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2.32.5)
00:50:04 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (80.9.0)
00:50:04 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (0.45.1)
00:50:04 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.4.3)
00:50:04 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (3.10)
00:50:04 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (1.26.20)
00:50:04 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.7.0->omero-iviewer==0.16.0.dev0) (2025.8.3)
00:50:04 Building wheels for collected packages: omero-iviewer
00:50:04 DEPRECATION: Building 'omero-iviewer' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-iviewer'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:04 Building wheel for omero-iviewer (setup.py): started
00:50:05 Building wheel for omero-iviewer (setup.py): finished with status 'done'
00:50:05 Created wheel for omero-iviewer: filename=omero_iviewer-0.16.0.dev0-py3-none-any.whl size=822093 sha256=ebfd68cd8373c597a3d3a4e96f95e7b4d762bddde03405299008d34170217736
00:50:05 Stored in directory: /home/omero/.cache/pip/wheels/39/0e/e1/26101d0e34e19a3b65418b90a4c6a4c7ac66e18727f68d4155
00:50:05 Successfully built omero-iviewer
00:50:05 Installing collected packages: omero-iviewer
00:50:05 Successfully installed omero-iviewer-0.16.0.dev0
00:50:05 + omero config set omero.web.use_x_forwarded_host true
00:50:06 + omero config set omero.web.secure_proxy_ssl_header '["HTTP_X_FORWARDED_PROTO", "https"]'
00:50:07 + omero config append omero.web.apps '"omero_iviewer"'
00:50:08 + omero config set omero.web.viewer.view omero_iviewer.views.index
00:50:09 + omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
00:50:10 + pip install git+https://github.com/snoopycrimecop/omero-figure.git@merge_ci#egg=omero-figure
00:50:10 Collecting omero-figure
00:50:10 Cloning https://github.com/snoopycrimecop/omero-figure.git (to revision merge_ci) to /tmp/pip-install-k0x0nj4g/omero-figure_5a512fce339a46e788f7ae580e82b867
00:50:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-figure.git /tmp/pip-install-k0x0nj4g/omero-figure_5a512fce339a46e788f7ae580e82b867
00:50:11 Resolved https://github.com/snoopycrimecop/omero-figure.git to commit 81f31ec6fbf7dfb5a917343a92c13bd09008dcdf
00:50:11 Preparing metadata (setup.py): started
00:50:11 Preparing metadata (setup.py): finished with status 'done'
00:50:11 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-figure) (5.29.3.dev0)
00:50:11 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (5.21.0)
00:50:11 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.28)
00:50:11 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.2.23)
00:50:11 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0.0)
00:50:11 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.7.0)
00:50:11 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (4.0)
00:50:11 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.9.0)
00:50:11 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (23.0.0)
00:50:11 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (0.9.1.dev0)
00:50:11 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (11.3.0)
00:50:11 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (2025.2)
00:50:11 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (3.2.0)
00:50:11 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (25.0)
00:50:11 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-figure) (6.5.2)
00:50:11 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (3.9.1)
00:50:11 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-figure) (0.5.3)
00:50:11 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.4.4)
00:50:11 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.0.0)
00:50:11 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.3.2)
00:50:11 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (6.0.2)
00:50:11 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.6.5)
00:50:11 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2.32.5)
00:50:11 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (80.9.0)
00:50:11 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-figure) (0.45.1)
00:50:11 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.4.3)
00:50:11 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (3.10)
00:50:11 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (1.26.20)
00:50:11 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-figure) (2025.8.3)
00:50:11 Building wheels for collected packages: omero-figure
00:50:11 DEPRECATION: Building 'omero-figure' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-figure'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:11 Building wheel for omero-figure (setup.py): started
00:50:23 Building wheel for omero-figure (setup.py): finished with status 'done'
00:50:23 Created wheel for omero-figure: filename=omero_figure-7.2.2.dev0-py3-none-any.whl size=1239692 sha256=e5247fe27efabc3a603f16965d6a533f41ef306272b538438dde893ea58f8fe5
00:50:23 Stored in directory: /tmp/pip-ephem-wheel-cache-ld7x_t6y/wheels/7a/dc/8b/d40cd89a9e4e8dd92668ddd6fe211eba320b7e8a12637ec527
00:50:23 Successfully built omero-figure
00:50:24 Installing collected packages: omero-figure
00:50:24 Successfully installed omero-figure-7.2.2.dev0
00:50:24 + omero config append omero.web.apps '"omero_figure"'
00:50:25 + omero config append omero.web.ui.top_links '["Figure", "figure_index", {"title": "Open Figure in new tab", "target": "_blank"}]'
00:50:26 + omero config append omero.web.open_with '["omero_figure", "new_figure", {"supported_objects":["images"], "target": "_blank", "label": "OMERO.figure"}]'
00:50:27 + pip install https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
00:50:27 Collecting https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
00:50:27 Downloading https://github.com/snoopycrimecop/omero-parade/archive/merge_ci.tar.gz
00:50:27 - 72.8 kB 31.3 MB/s 0:00:00
00:50:27 Preparing metadata (setup.py): started
00:50:28 Preparing metadata (setup.py): finished with status 'done'
00:50:28 Requirement already satisfied: omero-web>=5.6.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (5.29.3.dev0)
00:50:28 Requirement already satisfied: numpy in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-parade==0.2.5.dev0) (2.3.2)
00:50:28 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (5.21.0)
00:50:28 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.28)
00:50:28 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.2.23)
00:50:28 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0.0)
00:50:28 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.7.0)
00:50:28 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (4.0)
00:50:28 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.9.0)
00:50:28 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (23.0.0)
00:50:28 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.9.1.dev0)
00:50:28 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (11.3.0)
00:50:28 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.2)
00:50:28 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.2.0)
00:50:28 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (25.0)
00:50:28 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.5.2)
00:50:28 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.9.1)
00:50:28 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.5.3)
00:50:28 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.4.4)
00:50:28 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.0.0)
00:50:28 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (6.0.2)
00:50:28 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.6.5)
00:50:28 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2.32.5)
00:50:28 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (80.9.0)
00:50:28 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (0.45.1)
00:50:28 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.4.3)
00:50:28 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (3.10)
00:50:28 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (1.26.20)
00:50:28 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.1->omero-parade==0.2.5.dev0) (2025.8.3)
00:50:28 Building wheels for collected packages: omero-parade
00:50:28 DEPRECATION: Building 'omero-parade' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-parade'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:28 Building wheel for omero-parade (setup.py): started
00:50:33 Building wheel for omero-parade (setup.py): finished with status 'done'
00:50:33 Created wheel for omero-parade: filename=omero_parade-0.2.5.dev0-py3-none-any.whl size=299596 sha256=cd95615b9efc2084edb24012c8129833c2f0aeed0f57ce4a17e645afd03c9be2
00:50:33 Stored in directory: /tmp/pip-ephem-wheel-cache-lln8ydiv/wheels/bd/68/cc/5b4555362bd6182a2bab73b3ef3d25504d19ab613a30f04fea
00:50:33 Successfully built omero-parade
00:50:33 Installing collected packages: omero-parade
00:50:33 Successfully installed omero-parade-0.2.5.dev0
00:50:33 + omero config append omero.web.apps '"omero_parade"'
00:50:34 + omero config append omero.web.ui.center_plugins '["Parade", "omero_parade/init.js.html", "omero_parade"]'
00:50:35 + pip install git+https://github.com/snoopycrimecop/omero-fpbioimage.git@merge_ci#egg=omero-fpbioimage
00:50:35 Collecting omero-fpbioimage
00:50:35 Cloning https://github.com/snoopycrimecop/omero-fpbioimage.git (to revision merge_ci) to /tmp/pip-install-ajais4__/omero-fpbioimage_4da30d628e7441ed99a0cd57dd3b5b04
00:50:35 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-fpbioimage.git /tmp/pip-install-ajais4__/omero-fpbioimage_4da30d628e7441ed99a0cd57dd3b5b04
00:50:36 Running command git checkout -b merge_ci --track origin/merge_ci
00:50:37 Switched to a new branch 'merge_ci'
00:50:37 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:50:37 Resolved https://github.com/snoopycrimecop/omero-fpbioimage.git to commit a1a44fdbda5a68af94f8b2312d925691398f7935
00:50:37 Preparing metadata (setup.py): started
00:50:37 Preparing metadata (setup.py): finished with status 'done'
00:50:37 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-fpbioimage) (5.29.3.dev0)
00:50:37 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (5.21.0)
00:50:37 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.28)
00:50:37 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.2.23)
00:50:37 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0.0)
00:50:37 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.7.0)
00:50:37 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (4.0)
00:50:37 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.9.0)
00:50:37 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (23.0.0)
00:50:37 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (0.9.1.dev0)
00:50:37 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (11.3.0)
00:50:37 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (2025.2)
00:50:37 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (3.2.0)
00:50:37 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (25.0)
00:50:37 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-fpbioimage) (6.5.2)
00:50:37 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (3.9.1)
00:50:37 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-fpbioimage) (0.5.3)
00:50:37 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.4.4)
00:50:37 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.0.0)
00:50:37 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.3.2)
00:50:37 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (6.0.2)
00:50:37 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.6.5)
00:50:37 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2.32.5)
00:50:37 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (80.9.0)
00:50:37 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-fpbioimage) (0.45.1)
00:50:37 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.4.3)
00:50:37 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (3.10)
00:50:37 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (1.26.20)
00:50:37 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-fpbioimage) (2025.8.3)
00:50:37 Building wheels for collected packages: omero-fpbioimage
00:50:37 DEPRECATION: Building 'omero-fpbioimage' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-fpbioimage'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:37 Building wheel for omero-fpbioimage (setup.py): started
00:50:37 Building wheel for omero-fpbioimage (setup.py): finished with status 'done'
00:50:37 Created wheel for omero-fpbioimage: filename=omero_fpbioimage-0.4.2.dev0-py3-none-any.whl size=6923063 sha256=2f4540992ce0912a36164821751a16c40b89ea7e18e86db2be5178b5c444effd
00:50:37 Stored in directory: /tmp/pip-ephem-wheel-cache-53_sik99/wheels/7f/4c/02/4b9f833e501995681f93910cf0ef1e684e35d2352b62477460
00:50:37 Successfully built omero-fpbioimage
00:50:37 Installing collected packages: omero-fpbioimage
00:50:38 Successfully installed omero-fpbioimage-0.4.2.dev0
00:50:38 + omero config append omero.web.apps '"omero_fpbioimage"'
00:50:38 + omero config append omero.web.open_with '["omero_fpbioimage", "fpbioimage_index", {"script_url": "fpbioimage/openwith.js", "supported_objects": ["image"], "label": "FPBioimage"}]'
00:50:39 + pip install git+https://github.com/snoopycrimecop/omero-gallery.git@merge_ci#egg=omero-gallery
00:50:40 Collecting omero-gallery
00:50:40 Cloning https://github.com/snoopycrimecop/omero-gallery.git (to revision merge_ci) to /tmp/pip-install-xq2fe77n/omero-gallery_d275b420676e45b38426d1e93c357bcc
00:50:40 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-gallery.git /tmp/pip-install-xq2fe77n/omero-gallery_d275b420676e45b38426d1e93c357bcc
00:50:40 Resolved https://github.com/snoopycrimecop/omero-gallery.git to commit 56345c1b91846339133ee741ecb21603fc0f50ce
00:50:40 Preparing metadata (setup.py): started
00:50:41 Preparing metadata (setup.py): finished with status 'done'
00:50:41 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-gallery) (5.29.3.dev0)
00:50:41 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (5.21.0)
00:50:41 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.28)
00:50:41 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.2.23)
00:50:41 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0.0)
00:50:41 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.7.0)
00:50:41 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (4.0)
00:50:41 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.9.0)
00:50:41 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (23.0.0)
00:50:41 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (0.9.1.dev0)
00:50:41 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (11.3.0)
00:50:41 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (2025.2)
00:50:41 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (3.2.0)
00:50:41 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (25.0)
00:50:41 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-gallery) (6.5.2)
00:50:41 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (3.9.1)
00:50:41 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-gallery) (0.5.3)
00:50:41 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.4.4)
00:50:41 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.0.0)
00:50:41 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.3.2)
00:50:41 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (6.0.2)
00:50:41 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.6.5)
00:50:41 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2.32.5)
00:50:41 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (80.9.0)
00:50:41 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-gallery) (0.45.1)
00:50:41 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.4.3)
00:50:41 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (3.10)
00:50:41 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (1.26.20)
00:50:41 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-gallery) (2025.8.3)
00:50:41 Building wheels for collected packages: omero-gallery
00:50:41 DEPRECATION: Building 'omero-gallery' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-gallery'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:41 Building wheel for omero-gallery (setup.py): started
00:50:41 Building wheel for omero-gallery (setup.py): finished with status 'done'
00:50:41 Created wheel for omero-gallery: filename=omero_gallery-3.4.4.dev0-py3-none-any.whl size=308014 sha256=a2e8e52f55db982aadb4e06c0ba4e11bc704ff47cb5ae1e45482d850e541d1d5
00:50:41 Stored in directory: /tmp/pip-ephem-wheel-cache-c9vkou48/wheels/2f/43/25/64e360f70273008be68f22554e6bbc580d6058b34db2dc01fe
00:50:41 Successfully built omero-gallery
00:50:41 Installing collected packages: omero-gallery
00:50:41 Successfully installed omero-gallery-3.4.4.dev0
00:50:41 + omero config append omero.web.apps '"omero_gallery"'
00:50:42 + omero config append omero.web.ui.top_links '["Gallery", "webgallery_index", {"title": "Browse Gallery"}]'
00:50:43 + omero config set omero.web.gallery.category_queries '{"all":{"label":"All Studies", "index":0, "query":"FIRST50:Name"}}'
00:50:44 + pip install git+https://github.com/snoopycrimecop/omero-mapr.git@merge_ci#egg=omero-mapr
00:50:44 Collecting omero-mapr
00:50:44 Cloning https://github.com/snoopycrimecop/omero-mapr.git (to revision merge_ci) to /tmp/pip-install-oovretba/omero-mapr_8f96fa9d4ac64b90ac788c073c819d8e
00:50:44 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-mapr.git /tmp/pip-install-oovretba/omero-mapr_8f96fa9d4ac64b90ac788c073c819d8e
00:50:45 Resolved https://github.com/snoopycrimecop/omero-mapr.git to commit 1a80131c5e68377fc9c18c6a96825fdea3e933c0
00:50:45 Preparing metadata (setup.py): started
00:50:45 Preparing metadata (setup.py): finished with status 'done'
00:50:45 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-mapr) (2.32.5)
00:50:45 Requirement already satisfied: omero-web>=5.16.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web[redis]>=5.16.0->omero-mapr) (5.29.3.dev0)
00:50:45 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (5.21.0)
00:50:45 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.28)
00:50:45 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.2.23)
00:50:45 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0.0)
00:50:45 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.7.0)
00:50:45 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (4.0)
00:50:45 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.9.0)
00:50:45 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (23.0.0)
00:50:45 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.9.1.dev0)
00:50:45 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (11.3.0)
00:50:45 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2025.2)
00:50:45 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.2.0)
00:50:45 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (25.0)
00:50:45 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.5.2)
00:50:45 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.9.1)
00:50:45 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.5.3)
00:50:45 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.4.4)
00:50:45 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (1.0.0)
00:50:45 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (2.3.2)
00:50:45 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (6.0.2)
00:50:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (3.6.5)
00:50:45 Collecting django-redis==5.3.0 (from omero-web[redis]>=5.16.0->omero-mapr)
00:50:45 Using cached django_redis-5.3.0-py3-none-any.whl.metadata (31 kB)
00:50:45 Collecting redis!=4.0.0,!=4.0.1,>=3 (from django-redis==5.3.0->omero-web[redis]>=5.16.0->omero-mapr)
00:50:45 Using cached redis-6.4.0-py3-none-any.whl.metadata (10 kB)
00:50:45 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (80.9.0)
00:50:45 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.16.0->omero-web[redis]>=5.16.0->omero-mapr) (0.45.1)
00:50:45 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.4.3)
00:50:45 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (3.10)
00:50:45 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (1.26.20)
00:50:45 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-mapr) (2025.8.3)
00:50:45 Using cached django_redis-5.3.0-py3-none-any.whl (30 kB)
00:50:45 Using cached redis-6.4.0-py3-none-any.whl (279 kB)
00:50:45 Building wheels for collected packages: omero-mapr
00:50:45 DEPRECATION: Building 'omero-mapr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-mapr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:45 Building wheel for omero-mapr (setup.py): started
00:50:46 Building wheel for omero-mapr (setup.py): finished with status 'done'
00:50:46 Created wheel for omero-mapr: filename=omero_mapr-0.5.4.dev0-py3-none-any.whl size=67202 sha256=b785b46148c926dd8508c1f10597813833a7f2a30e08680e07d0969394e3f469
00:50:46 Stored in directory: /tmp/pip-ephem-wheel-cache-x8mywsns/wheels/4c/63/ca/d95f4dd3e08412d91be258a0a0164ddd07340dc39cfc1314b7
00:50:46 Successfully built omero-mapr
00:50:46 Installing collected packages: redis, django-redis, omero-mapr
00:50:46
00:50:46 Successfully installed django-redis-5.3.0 omero-mapr-0.5.4.dev0 redis-6.4.0
00:50:46 + omero config append omero.web.apps '"omero_mapr"'
00:50:47 + omero config append omero.web.mapr.config '{"menu": "anyvalue", "config":{"default":["Any Value"], "all":[], "ns":["openmicroscopy.org/omero/client/mapAnnotation"], "label":"Any"}}'
00:50:48 + omero config append omero.web.ui.top_links '["Any Map Value", {"viewname": "maprindex_anyvalue"}, {"title": "Search for values in any Key-Value pair"}]'
00:50:49 + pip install git+https://github.com/snoopycrimecop/omero-weberror.git@merge_ci#egg=omero-weberror
00:50:49 Collecting omero-weberror
00:50:49 Cloning https://github.com/snoopycrimecop/omero-weberror.git (to revision merge_ci) to /tmp/pip-install-_2e75o_0/omero-weberror_ddb58658db974798bda42ec96026ec01
00:50:49 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-weberror.git /tmp/pip-install-_2e75o_0/omero-weberror_ddb58658db974798bda42ec96026ec01
00:50:50 Running command git checkout -b merge_ci --track origin/merge_ci
00:50:50 Switched to a new branch 'merge_ci'
00:50:50 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:50:50 Resolved https://github.com/snoopycrimecop/omero-weberror.git to commit f320fa6f12c5128b91b19bc58eb090c5bbcc28a9
00:50:50 Preparing metadata (setup.py): started
00:50:51 Preparing metadata (setup.py): finished with status 'done'
00:50:51 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-weberror) (5.29.3.dev0)
00:50:51 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (5.21.0)
00:50:51 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.28)
00:50:51 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.2.23)
00:50:51 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0.0)
00:50:51 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.7.0)
00:50:51 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (4.0)
00:50:51 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.9.0)
00:50:51 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (23.0.0)
00:50:51 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (0.9.1.dev0)
00:50:51 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (11.3.0)
00:50:51 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (2025.2)
00:50:51 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (3.2.0)
00:50:51 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (25.0)
00:50:51 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-weberror) (6.5.2)
00:50:51 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (3.9.1)
00:50:51 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-weberror) (0.5.3)
00:50:51 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.4.4)
00:50:51 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.0.0)
00:50:51 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.3.2)
00:50:51 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (6.0.2)
00:50:51 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.6.5)
00:50:51 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2.32.5)
00:50:51 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (80.9.0)
00:50:51 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-weberror) (0.45.1)
00:50:51 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.4.3)
00:50:51 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (3.10)
00:50:51 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (1.26.20)
00:50:51 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-weberror) (2025.8.3)
00:50:51 Building wheels for collected packages: omero-weberror
00:50:51 DEPRECATION: Building 'omero-weberror' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-weberror'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:51 Building wheel for omero-weberror (setup.py): started
00:50:51 Building wheel for omero-weberror (setup.py): finished with status 'done'
00:50:51 Created wheel for omero-weberror: filename=omero_weberror-0.4.2.dev0-py3-none-any.whl size=18085 sha256=046c7ac0707b30db5694afa39a987285cf3f44d89f22d3552214cf6551272bac
00:50:51 Stored in directory: /tmp/pip-ephem-wheel-cache-49097daj/wheels/1b/c4/e6/04bca3174ab41b8b747e8bf10caebc5c9c15b7a2eacb8b65c6
00:50:51 Successfully built omero-weberror
00:50:51 Installing collected packages: omero-weberror
00:50:51 Successfully installed omero-weberror-0.4.2.dev0
00:50:51 + omero config append omero.web.apps '"omero_weberror"'
00:50:52 + pip install git+https://github.com/snoopycrimecop/omero-webtest.git@merge_ci#egg=omero-webtest
00:50:53 Collecting omero-webtest
00:50:53 Cloning https://github.com/snoopycrimecop/omero-webtest.git (to revision merge_ci) to /tmp/pip-install-bf61ail_/omero-webtest_03d051072c164ce5a7d9f97298e7946d
00:50:53 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-webtest.git /tmp/pip-install-bf61ail_/omero-webtest_03d051072c164ce5a7d9f97298e7946d
00:50:53 Running command git checkout -b merge_ci --track origin/merge_ci
00:50:54 Switched to a new branch 'merge_ci'
00:50:54 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:50:54 Resolved https://github.com/snoopycrimecop/omero-webtest.git to commit d71aa2aaa2052fc2bcacabf67c7da3ad11937227
00:50:54 Preparing metadata (setup.py): started
00:50:54 Preparing metadata (setup.py): finished with status 'done'
00:50:54 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-webtest) (5.29.3.dev0)
00:50:54 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (5.21.0)
00:50:54 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.28)
00:50:54 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.2.23)
00:50:54 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0.0)
00:50:54 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.7.0)
00:50:54 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (4.0)
00:50:54 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.9.0)
00:50:54 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (23.0.0)
00:50:54 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (0.9.1.dev0)
00:50:54 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (11.3.0)
00:50:54 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (2025.2)
00:50:54 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (3.2.0)
00:50:54 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (25.0)
00:50:54 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-webtest) (6.5.2)
00:50:54 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (3.9.1)
00:50:54 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-webtest) (0.5.3)
00:50:54 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.4.4)
00:50:54 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.0.0)
00:50:54 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.3.2)
00:50:54 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (6.0.2)
00:50:54 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.6.5)
00:50:54 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2.32.5)
00:50:54 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (80.9.0)
00:50:54 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-webtest) (0.45.1)
00:50:54 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.4.3)
00:50:54 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (3.10)
00:50:54 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (1.26.20)
00:50:54 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-webtest) (2025.8.3)
00:50:54 Building wheels for collected packages: omero-webtest
00:50:54 DEPRECATION: Building 'omero-webtest' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-webtest'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:54 Building wheel for omero-webtest (setup.py): started
00:50:54 Building wheel for omero-webtest (setup.py): finished with status 'done'
00:50:54 Created wheel for omero-webtest: filename=omero_webtest-0.4.3.dev0-py3-none-any.whl size=89791 sha256=64c8100a1590d8a6ee17def4a66ad2473e1770021646d23c98d540a231ec0eb5
00:50:54 Stored in directory: /tmp/pip-ephem-wheel-cache-szyopx5m/wheels/fd/26/7d/043e6c0814544fd87c3c46a6e949604651b87f011c6af32975
00:50:54 Successfully built omero-webtest
00:50:54 Installing collected packages: omero-webtest
00:50:54 Successfully installed omero-webtest-0.4.3.dev0
00:50:54 + omero config append omero.web.apps '"omero_webtest"'
00:50:55 + pip install git+https://github.com/German-BioImaging/omero-autotag.git@master
00:50:56 Collecting git+https://github.com/German-BioImaging/omero-autotag.git@master
00:50:56 Cloning https://github.com/German-BioImaging/omero-autotag.git (to revision master) to /tmp/pip-req-build-k59cxpxz
00:50:56 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-autotag.git /tmp/pip-req-build-k59cxpxz
00:50:56 Resolved https://github.com/German-BioImaging/omero-autotag.git to commit abbd98b087dc4064c3cf5b566b11b0b3fc623bd1
00:50:56 Preparing metadata (setup.py): started
00:50:57 Preparing metadata (setup.py): finished with status 'done'
00:50:57 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-autotag==4.1.0) (5.29.3.dev0)
00:50:57 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (5.21.0)
00:50:57 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.28)
00:50:57 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.2.23)
00:50:57 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0.0)
00:50:57 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.7.0)
00:50:57 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (4.0)
00:50:57 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.9.0)
00:50:57 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (23.0.0)
00:50:57 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (0.9.1.dev0)
00:50:57 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (11.3.0)
00:50:57 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (2025.2)
00:50:57 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (3.2.0)
00:50:57 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (25.0)
00:50:57 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-autotag==4.1.0) (6.5.2)
00:50:57 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (3.9.1)
00:50:57 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-autotag==4.1.0) (0.5.3)
00:50:57 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.4.4)
00:50:57 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.0.0)
00:50:57 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.3.2)
00:50:57 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (6.0.2)
00:50:57 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.6.5)
00:50:57 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2.32.5)
00:50:57 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (80.9.0)
00:50:57 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-autotag==4.1.0) (0.45.1)
00:50:57 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.4.3)
00:50:57 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (3.10)
00:50:57 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (1.26.20)
00:50:57 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-autotag==4.1.0) (2025.8.3)
00:50:57 Building wheels for collected packages: omero-autotag
00:50:57 DEPRECATION: Building 'omero-autotag' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-autotag'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:50:57 Building wheel for omero-autotag (setup.py): started
00:51:24 Building wheel for omero-autotag (setup.py): finished with status 'done'
00:51:24 Created wheel for omero-autotag: filename=omero_autotag-4.1.0-py3-none-any.whl size=617818 sha256=46d0b68a36164f521597dfe0d119210e36d911b24603b60ba8ec5f1e01422eff
00:51:24 Stored in directory: /tmp/pip-ephem-wheel-cache-cyt3n16v/wheels/05/82/4d/a3af657cf0a0f2014bb3f28257ed2d48d57fb0820c44fc0de6
00:51:24 Successfully built omero-autotag
00:51:24 Installing collected packages: omero-autotag
00:51:24 Successfully installed omero-autotag-4.1.0
00:51:25 + omero config append omero.web.apps '"omero_autotag"'
00:51:26 + omero config append omero.web.ui.center_plugins '["Auto Tag", "omero_autotag/auto_tag_init.js.html", "auto_tag_panel"]'
00:51:27 + pip install git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
00:51:27 Collecting git+https://github.com/German-BioImaging/omero-tagsearch.git@refs/pull/16/head
00:51:27 Cloning https://github.com/German-BioImaging/omero-tagsearch.git (to revision refs/pull/16/head) to /tmp/pip-req-build-0gzrgy01
00:51:27 Running command git clone --filter=blob:none --quiet https://github.com/German-BioImaging/omero-tagsearch.git /tmp/pip-req-build-0gzrgy01
00:51:28 Did not find branch or tag 'refs/pull/16/head', assuming revision or ref.
00:51:28 Running command git fetch -q https://github.com/German-BioImaging/omero-tagsearch.git refs/pull/16/head
00:51:28 Running command git checkout -q 4f011465d4a6a6b59f201d315f5376a438410684
00:51:28 Resolved https://github.com/German-BioImaging/omero-tagsearch.git to commit 4f011465d4a6a6b59f201d315f5376a438410684
00:51:28 Preparing metadata (setup.py): started
00:51:29 Preparing metadata (setup.py): finished with status 'done'
00:51:29 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-tagsearch==4.2.0) (5.29.3.dev0)
00:51:29 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (5.21.0)
00:51:29 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.28)
00:51:29 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.2.23)
00:51:29 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0.0)
00:51:29 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.7.0)
00:51:29 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (4.0)
00:51:29 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.9.0)
00:51:29 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (23.0.0)
00:51:29 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.9.1.dev0)
00:51:29 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (11.3.0)
00:51:29 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.2)
00:51:29 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.2.0)
00:51:29 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (25.0)
00:51:29 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.5.2)
00:51:29 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.9.1)
00:51:29 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.5.3)
00:51:29 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.4.4)
00:51:29 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.0.0)
00:51:29 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.3.2)
00:51:29 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (6.0.2)
00:51:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.6.5)
00:51:29 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2.32.5)
00:51:29 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (80.9.0)
00:51:29 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-tagsearch==4.2.0) (0.45.1)
00:51:29 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.4.3)
00:51:29 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (3.10)
00:51:29 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (1.26.20)
00:51:29 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-tagsearch==4.2.0) (2025.8.3)
00:51:29 Building wheels for collected packages: omero-tagsearch
00:51:29 DEPRECATION: Building 'omero-tagsearch' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-tagsearch'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:51:29 Building wheel for omero-tagsearch (setup.py): started
00:51:29 Building wheel for omero-tagsearch (setup.py): finished with status 'done'
00:51:29 Created wheel for omero-tagsearch: filename=omero_tagsearch-4.2.0-py3-none-any.whl size=132257 sha256=01b9f96ea2dd971b302c691d9a3f881c7f71f54196980c1d1d7b08bbf78d7702
00:51:29 Stored in directory: /tmp/pip-ephem-wheel-cache-_zzatqz9/wheels/9e/ee/29/cd5c9acc8a621fd035a8c40cb7a1d30371fd6412f2fbe5e166
00:51:29 Successfully built omero-tagsearch
00:51:29 Installing collected packages: omero-tagsearch
00:51:29 Successfully installed omero-tagsearch-4.2.0
00:51:29 + omero config append omero.web.apps '"omero_tagsearch"'
00:51:30 + omero config append omero.web.ui.top_links '["Tag Search", "tagsearch"]'
00:51:31 + pip install git+https://github.com/snoopycrimecop/omero-web-zarr.git@merge_ci#egg=omero-web-zarr
00:51:31 Collecting omero-web-zarr
00:51:31 Cloning https://github.com/snoopycrimecop/omero-web-zarr.git (to revision merge_ci) to /tmp/pip-install-2auuavyu/omero-web-zarr_f38235b0c42049d7aec25f8ae5a18ad2
00:51:31 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-web-zarr.git /tmp/pip-install-2auuavyu/omero-web-zarr_f38235b0c42049d7aec25f8ae5a18ad2
00:51:32 Running command git checkout -b merge_ci --track origin/merge_ci
00:51:32 Switched to a new branch 'merge_ci'
00:51:32 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:51:32 Resolved https://github.com/snoopycrimecop/omero-web-zarr.git to commit 59b71ceef6c50225b1f263283ea08bef9692436e
00:51:32 Preparing metadata (setup.py): started
00:51:33 Preparing metadata (setup.py): finished with status 'done'
00:51:33 Collecting zarr (from omero-web-zarr)
00:51:33 Using cached zarr-3.1.1-py3-none-any.whl.metadata (10 kB)
00:51:33 Collecting donfig>=0.8 (from zarr->omero-web-zarr)
00:51:33 Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
00:51:33 Collecting numcodecs>=0.14 (from numcodecs[crc32c]>=0.14->zarr->omero-web-zarr)
00:51:33 Using cached numcodecs-0.16.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.3 kB)
00:51:33 Requirement already satisfied: numpy>=1.26 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->omero-web-zarr) (2.3.2)
00:51:33 Requirement already satisfied: packaging>=22.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from zarr->omero-web-zarr) (25.0)
00:51:33 Collecting typing-extensions>=4.9 (from zarr->omero-web-zarr)
00:51:33 Using cached typing_extensions-4.14.1-py3-none-any.whl.metadata (3.0 kB)
00:51:33 Requirement already satisfied: pyyaml in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from donfig>=0.8->zarr->omero-web-zarr) (6.0.2)
00:51:33 Collecting crc32c>=2.7 (from numcodecs[crc32c]>=0.14->zarr->omero-web-zarr)
00:51:33 Using cached crc32c-2.7.1-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.3 kB)
00:51:33 Using cached zarr-3.1.1-py3-none-any.whl (255 kB)
00:51:33 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
00:51:33 Using cached numcodecs-0.16.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (8.8 MB)
00:51:33 Using cached crc32c-2.7.1-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (53 kB)
00:51:33 Using cached typing_extensions-4.14.1-py3-none-any.whl (43 kB)
00:51:33 Building wheels for collected packages: omero-web-zarr
00:51:33 DEPRECATION: Building 'omero-web-zarr' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-web-zarr'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:51:33 Building wheel for omero-web-zarr (setup.py): started
00:51:33 Building wheel for omero-web-zarr (setup.py): finished with status 'done'
00:51:33 Created wheel for omero-web-zarr: filename=omero_web_zarr-0.1.2.dev0-py3-none-any.whl size=22335 sha256=2aff9adc111e1025b9b138d7bf505593aea458aea122ea55edc6b4300b892f53
00:51:33 Stored in directory: /tmp/pip-ephem-wheel-cache-qquvct2c/wheels/97/92/0c/1f5befedf8dfe340e4f39c35149d27cd63d884ad999f237376
00:51:33 Successfully built omero-web-zarr
00:51:33 Installing collected packages: typing-extensions, donfig, crc32c, numcodecs, zarr, omero-web-zarr
00:51:34
00:51:34 Successfully installed crc32c-2.7.1 donfig-0.8.1.post1 numcodecs-0.16.2 omero-web-zarr-0.1.2.dev0 typing-extensions-4.14.1 zarr-3.1.1
00:51:34 + omero config append omero.web.apps '"omero_web_zarr"'
00:51:35 + pip install git+https://github.com/BioNGFF/omero-biofilefinder.git@main#egg=omero-biofilefinder
00:51:35 Collecting omero-biofilefinder
00:51:35 Cloning https://github.com/BioNGFF/omero-biofilefinder.git (to revision main) to /tmp/pip-install-myekofee/omero-biofilefinder_340fe6b64faf45ad8a83224fb617c29a
00:51:35 Running command git clone --filter=blob:none --quiet https://github.com/BioNGFF/omero-biofilefinder.git /tmp/pip-install-myekofee/omero-biofilefinder_340fe6b64faf45ad8a83224fb617c29a
00:51:36 Resolved https://github.com/BioNGFF/omero-biofilefinder.git to commit e5c9133e7ae55ae643fc2505866b04a1149c28c3
00:51:36 Installing build dependencies: started
00:51:37 Installing build dependencies: finished with status 'done'
00:51:37 Getting requirements to build wheel: started
00:51:38 Getting requirements to build wheel: finished with status 'done'
00:51:38 Preparing metadata (pyproject.toml): started
00:51:38 Preparing metadata (pyproject.toml): finished with status 'done'
00:51:38 Requirement already satisfied: omero-web in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-biofilefinder) (5.29.3.dev0)
00:51:38 Collecting pyarrow (from omero-biofilefinder)
00:51:38 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl.metadata (3.3 kB)
00:51:38 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (5.21.0)
00:51:38 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.28)
00:51:38 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.2.23)
00:51:38 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0.0)
00:51:38 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.7.0)
00:51:38 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (4.0)
00:51:38 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.9.0)
00:51:38 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (23.0.0)
00:51:38 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (0.9.1.dev0)
00:51:38 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (11.3.0)
00:51:38 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (2025.2)
00:51:38 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (3.2.0)
00:51:38 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (25.0)
00:51:38 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web->omero-biofilefinder) (6.5.2)
00:51:38 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (3.9.1)
00:51:38 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web->omero-biofilefinder) (0.5.3)
00:51:38 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.4.4)
00:51:38 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.0.0)
00:51:38 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.3.2)
00:51:38 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (6.0.2)
00:51:38 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.6.5)
00:51:38 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web->omero-biofilefinder) (2.32.5)
00:51:38 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (80.9.0)
00:51:38 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web->omero-biofilefinder) (0.45.1)
00:51:38 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.4.3)
00:51:38 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (3.10)
00:51:38 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (1.26.20)
00:51:38 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web->omero-biofilefinder) (2025.8.3)
00:51:38 Using cached pyarrow-21.0.0-cp311-cp311-manylinux_2_28_x86_64.whl (42.8 MB)
00:51:38 Building wheels for collected packages: omero-biofilefinder
00:51:38 Building wheel for omero-biofilefinder (pyproject.toml): started
00:51:39 Building wheel for omero-biofilefinder (pyproject.toml): finished with status 'done'
00:51:39 Created wheel for omero-biofilefinder: filename=omero_biofilefinder-0.1.0.dev0-py3-none-any.whl size=6333148 sha256=e2fb2b1b77a7c7885153df406cd0d10fdf95fb46c1a7825fd3934f97bf21b018
00:51:39 Stored in directory: /tmp/pip-ephem-wheel-cache-1mx10agu/wheels/d5/6e/a2/d890a6f8bfe579c8dab0c5138dcc79f4395c0320b24aedff84
00:51:39 Successfully built omero-biofilefinder
00:51:39 Installing collected packages: pyarrow, omero-biofilefinder
00:51:41
00:51:41 Successfully installed omero-biofilefinder-0.1.0.dev0 pyarrow-21.0.0
00:51:41 + omero config append omero.web.apps '"omero_biofilefinder"'
00:51:42 + omero config set omero.web.bff.force_https True
00:51:43 + omero config append omero.web.open_with '["omero_bff", "omero_biofilefinder_openwith", {"supported_objects":["project"], "target": "_blank", "label": "BioFile Finder"}]'
00:51:43 + pip install git+https://github.com/snoopycrimecop/omero-signup.git@merge_ci#egg=omero-signup
00:51:44 Collecting omero-signup
00:51:44 Cloning https://github.com/snoopycrimecop/omero-signup.git (to revision merge_ci) to /tmp/pip-install-4qkvd73l/omero-signup_54f001d409824b7e8590f6c69a06327b
00:51:44 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-signup.git /tmp/pip-install-4qkvd73l/omero-signup_54f001d409824b7e8590f6c69a06327b
00:51:45 Running command git checkout -b merge_ci --track origin/merge_ci
00:51:45 Switched to a new branch 'merge_ci'
00:51:45 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:51:45 Resolved https://github.com/snoopycrimecop/omero-signup.git to commit 577268ab009671091780369504fc217d9b6e73bb
00:51:45 Preparing metadata (setup.py): started
00:51:45 Preparing metadata (setup.py): finished with status 'done'
00:51:45 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-signup) (5.29.3.dev0)
00:51:45 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (5.21.0)
00:51:45 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.28)
00:51:45 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.2.23)
00:51:45 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0.0)
00:51:45 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.7.0)
00:51:45 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (4.0)
00:51:45 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.9.0)
00:51:45 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (23.0.0)
00:51:45 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (0.9.1.dev0)
00:51:45 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (11.3.0)
00:51:45 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (2025.2)
00:51:45 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (3.2.0)
00:51:45 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (25.0)
00:51:45 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-signup) (6.5.2)
00:51:45 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (3.9.1)
00:51:45 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-signup) (0.5.3)
00:51:45 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.4.4)
00:51:45 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.0.0)
00:51:45 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.3.2)
00:51:45 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (6.0.2)
00:51:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.6.5)
00:51:45 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2.32.5)
00:51:45 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (80.9.0)
00:51:45 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-signup) (0.45.1)
00:51:45 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.4.3)
00:51:45 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (3.10)
00:51:45 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (1.26.20)
00:51:45 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-signup) (2025.8.3)
00:51:45 Building wheels for collected packages: omero-signup
00:51:45 DEPRECATION: Building 'omero-signup' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-signup'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:51:45 Building wheel for omero-signup (setup.py): started
00:51:45 Building wheel for omero-signup (setup.py): finished with status 'done'
00:51:45 Created wheel for omero-signup: filename=omero_signup-0.3.4.dev0-py3-none-any.whl size=24419 sha256=5aee5e3cd95a02118773cccab5de2388fe6a51572c0168a9d6d4f8fab6bab55b
00:51:45 Stored in directory: /tmp/pip-ephem-wheel-cache-hqikaj5f/wheels/47/cb/fe/b950fb8aeb3188c590a5e045d574b1614eac317e43fa840236
00:51:45 Successfully built omero-signup
00:51:45 Installing collected packages: omero-signup
00:51:45 Successfully installed omero-signup-0.3.4.dev0
00:51:46 + omero config append omero.web.apps '"omero_signup"'
00:51:46 + omero config set omero.web.signup.admin.user root
00:51:47 + omero config set omero.web.signup.admin.password omero
00:51:48 + omero config set omero.web.signup.group.name signup-test
00:51:49 + omero config set omero.web.signup.email.enabled True
00:51:50 + pip install git+https://github.com/snoopycrimecop/omero-virtual-microscope.git@merge_ci#egg=omero-virtual-microscope
00:51:51 Collecting omero-virtual-microscope
00:51:51 Cloning https://github.com/snoopycrimecop/omero-virtual-microscope.git (to revision merge_ci) to /tmp/pip-install-8z850rxi/omero-virtual-microscope_cc92cd2fa35741679c29d86ae9001424
00:51:51 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-virtual-microscope.git /tmp/pip-install-8z850rxi/omero-virtual-microscope_cc92cd2fa35741679c29d86ae9001424
00:51:51 Running command git checkout -b merge_ci --track origin/merge_ci
00:51:52 Switched to a new branch 'merge_ci'
00:51:52 branch 'merge_ci' set up to track 'origin/merge_ci'.
00:51:52 Resolved https://github.com/snoopycrimecop/omero-virtual-microscope.git to commit 672a4b8b428ff123bb0c5633d014c7be827401dc
00:51:52 Preparing metadata (setup.py): started
00:51:52 Preparing metadata (setup.py): finished with status 'done'
00:51:52 Requirement already satisfied: omero-web>=5.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-virtual-microscope) (5.29.3.dev0)
00:51:52 Requirement already satisfied: omero-py>=5.19.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (5.21.0)
00:51:52 Requirement already satisfied: concurrent-log-handler>=0.9.20 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.28)
00:51:52 Requirement already satisfied: Django<4.3,>=4.2.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.2.23)
00:51:52 Requirement already satisfied: django-pipeline in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0.0)
00:51:52 Requirement already satisfied: django-cors-headers==3.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.7.0)
00:51:52 Requirement already satisfied: django-csp in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (4.0)
00:51:52 Requirement already satisfied: whitenoise>=5.3.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.9.0)
00:51:52 Requirement already satisfied: gunicorn>=19.3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (23.0.0)
00:51:52 Requirement already satisfied: omero-marshal>=0.7.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (0.9.1.dev0)
00:51:52 Requirement already satisfied: Pillow in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (11.3.0)
00:51:52 Requirement already satisfied: pytz in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (2025.2)
00:51:52 Requirement already satisfied: portalocker in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (3.2.0)
00:51:52 Requirement already satisfied: packaging in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (25.0)
00:51:52 Requirement already satisfied: importlib-resources in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-web>=5.6.0->omero-virtual-microscope) (6.5.2)
00:51:52 Requirement already satisfied: asgiref<4,>=3.6.0 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (3.9.1)
00:51:52 Requirement already satisfied: sqlparse>=0.3.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from Django<4.3,>=4.2.3->omero-web>=5.6.0->omero-virtual-microscope) (0.5.3)
00:51:52 Requirement already satisfied: appdirs in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.4.4)
00:51:52 Requirement already satisfied: future in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.0.0)
00:51:52 Requirement already satisfied: numpy<3 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.3.2)
00:51:52 Requirement already satisfied: PyYAML in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (6.0.2)
00:51:52 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.6.5)
00:51:52 Requirement already satisfied: requests in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2.32.5)
00:51:52 Requirement already satisfied: setuptools in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (80.9.0)
00:51:52 Requirement already satisfied: wheel in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web>=5.6.0->omero-virtual-microscope) (0.45.1)
00:51:52 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.4.3)
00:51:52 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (3.10)
00:51:52 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (1.26.20)
00:51:52 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-web/.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web>=5.6.0->omero-virtual-microscope) (2025.8.3)
00:51:52 Building wheels for collected packages: omero-virtual-microscope
00:51:52 DEPRECATION: Building 'omero-virtual-microscope' using the legacy setup.py bdist_wheel mechanism, which will be removed in a future version. pip 25.3 will enforce this behaviour change. A possible replacement is to use the standardized build interface by setting the `--use-pep517` option, (possibly combined with `--no-build-isolation`), or adding a `pyproject.toml` file to the source tree of 'omero-virtual-microscope'. Discussion can be found at https://github.com/pypa/pip/issues/6334
00:51:52 Building wheel for omero-virtual-microscope (setup.py): started
00:51:52 Building wheel for omero-virtual-microscope (setup.py): finished with status 'done'
00:51:52 Created wheel for omero-virtual-microscope: filename=omero_virtual_microscope-1.1.2.dev0-py3-none-any.whl size=17375 sha256=b2e5e765b159ad932e77b3e50e4e14983884370e6c56eba8e61802f9208ad373
00:51:52 Stored in directory: /tmp/pip-ephem-wheel-cache-jmdmrig6/wheels/0f/38/be/3c5aedfd619e2ce9f2ac800e8ad92e0b65117ebbf35f5b5bf6
00:51:52 Successfully built omero-virtual-microscope
00:51:52 Installing collected packages: omero-virtual-microscope
00:51:52 Successfully installed omero-virtual-microscope-1.1.2.dev0
00:51:52 + omero config append omero.web.apps '"virtualmicroscope"'
00:51:53 + omero config set omero.web.login_redirect '{"redirect": ["webindex"], "viewname": "webindex_custom"}'
00:51:54 + omero config append omero.web.apps '"corsheaders"'
00:51:55 + omero config append omero.web.middleware '{"index": 0.5, "class": "corsheaders.middleware.CorsMiddleware"}'
00:51:56 + omero config append omero.web.middleware '{"index": 10, "class": "corsheaders.middleware.CorsPostCsrfMiddleware"}'
00:51:57 + omero config set omero.web.cors_origin_allow_all True
00:51:58 + omero config append omero.web.csrf_trusted_origins '"https://merge-ci.openmicroscopy.org"'
00:51:59 + omero config set omero.web.sharing.opengraph '{"omero":"Open Microscopy"}'
00:52:00 + omero config set omero.web.sharing.twitter '{"omero":"@openmicroscopy"}'
00:52:01 + omero config set omero.web.public.enabled true
00:52:02 + omero config set omero.web.public.user public
00:52:03 + omero config set omero.web.public.password public
00:52:04 + omero config set omero.web.public.url_filter '^/'
00:52:05 + omero config set omero.web.feedback.comment.enabled false
00:52:06 + omero config set omero.web.feedback.error.enabled false
00:52:06 + BUILD_ID=DONT_KILL_ME
00:52:06 + omero web start
00:52:08
00:52:08 733 static files copied to '/home/omero/static/web', 2 post-processed.
00:52:08 Clearing expired sessions. This may take some time... [OK]
00:52:10 Starting OMERO.web... [OK]
00:52:10 + omero web diagnostics
00:52:11
00:52:11 ================================================================================
00:52:11 OMERO Diagnostics (web)
00:52:11 ================================================================================
00:52:11
00:52:11 OMERO.web status... [RUNNING] (PID 17694)
00:52:11 Django version: 4.2.23
00:52:11
00:52:11 Log dir: /home/omero/workspace/OMERO-web/OMERO.web/var/log exists
00:52:11 Log file : OMEROweb.log 2.5 KB
00:52:11 + deactivate
00:52:11 + '[' -n /usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:52:11 + PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:52:11 + export PATH
00:52:11 + unset _OLD_VIRTUAL_PATH
00:52:11 + '[' -n '' ']'
00:52:11 + hash -r
00:52:11 + '[' -n '' ']'
00:52:11 + unset VIRTUAL_ENV
00:52:11 + unset VIRTUAL_ENV_PROMPT
00:52:11 + '[' '!' '' = nondestructive ']'
00:52:11 + unset -f deactivate
00:52:11 Finished: SUCCESS
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