09:32:18 Started by user devspace
09:32:18 Running as SYSTEM
09:32:18 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-docs
09:32:18 The recommended git tool is: NONE
09:32:18 No credentials specified
09:32:18 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-docs/.git # timeout=10
09:32:18 Fetching changes from the remote Git repository
09:32:18 > git config remote.origin.url https://github.com/ome/ome-documentation # timeout=10
09:32:18 Fetching upstream changes from https://github.com/ome/ome-documentation
09:32:18 > git --version # timeout=10
09:32:18 > git --version # 'git version 2.39.3'
09:32:18 > git fetch --tags --force --progress -- https://github.com/ome/ome-documentation +refs/heads/*:refs/remotes/origin/* # timeout=10
09:32:18 > git rev-parse origin/develop^{commit} # timeout=10
09:32:18 Checking out Revision 10c7cf899dd8495b74d7d904702eafebbd52a260 (origin/develop)
09:32:18 > git config core.sparsecheckout # timeout=10
09:32:18 > git checkout -f 10c7cf899dd8495b74d7d904702eafebbd52a260 # timeout=10
09:32:18 Commit message: "bump openmicroscopy to 5.6.12 and bio-formats to 7.3.1"
09:32:18 > git rev-list --no-walk 10c7cf899dd8495b74d7d904702eafebbd52a260 # timeout=10
09:32:18 Cleaning workspace
09:32:18 > git rev-parse --verify HEAD # timeout=10
09:32:18 Resetting working tree
09:32:18 > git reset --hard # timeout=10
09:32:18 > git clean -fdx # timeout=10
09:32:19 [OMERO-docs] $ /bin/bash -xe /tmp/jenkins13706157530529337103.sh
09:32:19 + python3 -mvenv venv
09:32:21 + source /home/omero/workspace/OMERO-docs/venv/bin/activate
09:32:21 ++ deactivate nondestructive
09:32:21 ++ '[' -n '' ']'
09:32:21 ++ '[' -n '' ']'
09:32:21 ++ '[' -n /bin/bash -o -n '' ']'
09:32:21 ++ hash -r
09:32:21 ++ '[' -n '' ']'
09:32:21 ++ unset VIRTUAL_ENV
09:32:21 ++ '[' '!' nondestructive = nondestructive ']'
09:32:21 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-docs/venv
09:32:21 ++ export VIRTUAL_ENV
09:32:21 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:32:21 ++ PATH=/home/omero/workspace/OMERO-docs/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:32:21 ++ export PATH
09:32:21 ++ '[' -n '' ']'
09:32:21 ++ '[' -z '' ']'
09:32:21 ++ _OLD_VIRTUAL_PS1=
09:32:21 ++ PS1='(venv) '
09:32:21 ++ export PS1
09:32:21 ++ '[' -n /bin/bash -o -n '' ']'
09:32:21 ++ hash -r
09:32:21 + pip install -U pip
09:32:22 Requirement already satisfied: pip in ./venv/lib/python3.9/site-packages (21.2.3)
09:32:22 Collecting pip
09:32:22 Using cached pip-24.2-py3-none-any.whl (1.8 MB)
09:32:22 Installing collected packages: pip
09:32:22 Attempting uninstall: pip
09:32:22 Found existing installation: pip 21.2.3
09:32:22 Uninstalling pip-21.2.3:
09:32:22 Successfully uninstalled pip-21.2.3
09:32:23 Successfully installed pip-24.2
09:32:23 + pip install -U scc
09:32:24 Collecting scc
09:32:24 Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
09:32:24 Collecting PyGithub>=1.54 (from scc)
09:32:24 Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
09:32:24 Collecting PyYAML>=5.1 (from scc)
09:32:24 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
09:32:24 Collecting future (from scc)
09:32:24 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
09:32:24 Collecting ruamel.yaml (from scc)
09:32:24 Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
09:32:24 Collecting ruamel.yaml.jinja2 (from scc)
09:32:24 Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
09:32:24 Collecting six (from scc)
09:32:24 Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
09:32:24 Collecting urllib3<2 (from scc)
09:32:24 Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
09:32:24 Collecting yaclifw<0.3,>=0.2.0 (from scc)
09:32:24 Using cached yaclifw-0.2.0-py3-none-any.whl
09:32:25 Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
09:32:25 Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
09:32:25 Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
09:32:25 Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
09:32:25 Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:32:25 Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
09:32:25 Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
09:32:25 Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
09:32:25 Collecting Deprecated (from PyGithub>=1.54->scc)
09:32:25 Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
09:32:25 Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
09:32:25 Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
09:32:25 Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
09:32:25 Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
09:32:25 Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
09:32:25 Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
09:32:25 Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:32:25 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
09:32:25 Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:32:25 Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
09:32:25 Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
09:32:25 Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB)
09:32:25 Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
09:32:25 Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
09:32:25 Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
09:32:25 Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
09:32:26 Using cached scc-0.20.0-py3-none-any.whl (48 kB)
09:32:26 Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
09:32:26 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
09:32:26 Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
09:32:26 Using cached future-1.0.0-py3-none-any.whl (491 kB)
09:32:26 Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
09:32:26 Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
09:32:26 Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
09:32:26 Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
09:32:26 Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
09:32:26 Using cached requests-2.32.3-py3-none-any.whl (64 kB)
09:32:26 Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
09:32:26 Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
09:32:26 Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
09:32:26 Using cached certifi-2024.7.4-py3-none-any.whl (162 kB)
09:32:26 Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
09:32:26 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
09:32:26 Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
09:32:26 Using cached idna-3.7-py3-none-any.whl (66 kB)
09:32:26 Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
09:32:26 Using cached pycparser-2.22-py3-none-any.whl (117 kB)
09:32:26 Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
09:32:27 Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
09:32:27 + test -e src
09:32:27 + scc merge develop --no-ask --reset --comment -S success-only --push merge_ci
09:32:29 Following Github server redirection from /repos/ome/ome-documentation to /repositories/3198415
09:32:29 2024-07-30 09:32:29,535 [github.Reque] INFO Following Github server redirection from /repos/ome/ome-documentation to /repositories/3198415
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Merging Pull Request(s) based on develop
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
09:32:31 2024-07-30 09:32:31,453 [ scc.merge] INFO Excluding Pull Request(s) without successful status
09:32:45 2024-07-30 09:32:45,876 [ scc.git] INFO - PR 2353 jburel 'Mencoder'
09:32:45 Conflicting PR. Removed from build [OMERO-docs#136](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-docs/136/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-docs/136/consoleText) for more details.
09:32:45 Possible conflicts:
09:32:45 - Upstream changes
09:32:45 - omero/sysadmins/omeromovie.rst
09:32:45
09:32:45 --conflicts
09:32:45
09:32:46 2024-07-30 09:32:46,296 [ scc.merge] INFO Repository: ome/ome-documentation
09:32:46 2024-07-30 09:32:46,296 [ scc.merge] INFO Excluded PRs:
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2393 bernt-matthias 'fix option capitalization' (user: bernt-matthias)
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2357 fmeyenhofer 'Add a OMERO.table visualisation example' (user: fmeyenhofer)
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2347 jburel 'pin version to match rtd ones' (exclude comment)
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2298 pwalczysko 'test' (exclude comment)
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2291 pwalczysko 'Add ansible and docker install doc - former "install.rst"' (status: failure)
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO Already up to date.
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO Merged PRs:
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2355 will-moore 'Update python Tables code to use 'Image' column'
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO Conflicting PRs (not included):
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO - PR 2353 jburel 'Mencoder'
09:32:46 2024-07-30 09:32:46,297 [ scc.merge] INFO
09:32:48 2024-07-30 09:32:48,498 [ scc.merge] INFO Merged branch pushed to https://github.com/snoopycrimecop/ome-documentation/tree/merge_ci
09:32:48 [OMERO-docs] $ /bin/bash -xe /tmp/jenkins3511533740066274230.sh
09:32:48 + source /home/omero/workspace/OMERO-docs/venv/bin/activate
09:32:48 ++ deactivate nondestructive
09:32:48 ++ '[' -n '' ']'
09:32:48 ++ '[' -n '' ']'
09:32:48 ++ '[' -n /bin/bash -o -n '' ']'
09:32:48 ++ hash -r
09:32:48 ++ '[' -n '' ']'
09:32:48 ++ unset VIRTUAL_ENV
09:32:48 ++ '[' '!' nondestructive = nondestructive ']'
09:32:48 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-docs/venv
09:32:48 ++ export VIRTUAL_ENV
09:32:48 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:32:48 ++ PATH=/home/omero/workspace/OMERO-docs/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:32:48 ++ export PATH
09:32:48 ++ '[' -n '' ']'
09:32:48 ++ '[' -z '' ']'
09:32:48 ++ _OLD_VIRTUAL_PS1=
09:32:48 ++ PS1='(venv) '
09:32:48 ++ export PS1
09:32:48 ++ '[' -n /bin/bash -o -n '' ']'
09:32:48 ++ hash -r
09:32:48 + pip install -r requirements.txt
09:32:49 Collecting sphinx==5.3.0 (from -r requirements.txt (line 1))
09:32:49 Using cached sphinx-5.3.0-py3-none-any.whl.metadata (6.4 kB)
09:32:49 Collecting sphinx_rtd_theme==1.1.1 (from -r requirements.txt (line 2))
09:32:49 Using cached sphinx_rtd_theme-1.1.1-py2.py3-none-any.whl.metadata (4.4 kB)
09:32:49 Collecting sphinxcontrib-applehelp (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_applehelp-2.0.0-py3-none-any.whl.metadata (2.3 kB)
09:32:49 Collecting sphinxcontrib-devhelp (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_devhelp-2.0.0-py3-none-any.whl.metadata (2.3 kB)
09:32:49 Collecting sphinxcontrib-jsmath (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl.metadata (1.4 kB)
09:32:49 Collecting sphinxcontrib-htmlhelp>=2.0.0 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_htmlhelp-2.1.0-py3-none-any.whl.metadata (2.3 kB)
09:32:49 Collecting sphinxcontrib-serializinghtml>=1.1.5 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_serializinghtml-2.0.0-py3-none-any.whl.metadata (2.4 kB)
09:32:49 Collecting sphinxcontrib-qthelp (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached sphinxcontrib_qthelp-2.0.0-py3-none-any.whl.metadata (2.3 kB)
09:32:49 Collecting Jinja2>=3.0 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached jinja2-3.1.4-py3-none-any.whl.metadata (2.6 kB)
09:32:49 Collecting Pygments>=2.12 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached pygments-2.18.0-py3-none-any.whl.metadata (2.5 kB)
09:32:49 Collecting docutils<0.20,>=0.14 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached docutils-0.19-py3-none-any.whl.metadata (2.7 kB)
09:32:49 Collecting snowballstemmer>=2.0 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached snowballstemmer-2.2.0-py2.py3-none-any.whl.metadata (6.5 kB)
09:32:49 Collecting babel>=2.9 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached Babel-2.15.0-py3-none-any.whl.metadata (1.5 kB)
09:32:49 Collecting alabaster<0.8,>=0.7 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached alabaster-0.7.16-py3-none-any.whl.metadata (2.9 kB)
09:32:49 Collecting imagesize>=1.3 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached imagesize-1.4.1-py2.py3-none-any.whl.metadata (1.5 kB)
09:32:49 Requirement already satisfied: requests>=2.5.0 in ./venv/lib/python3.9/site-packages (from sphinx==5.3.0->-r requirements.txt (line 1)) (2.32.3)
09:32:49 Collecting packaging>=21.0 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached packaging-24.1-py3-none-any.whl.metadata (3.2 kB)
09:32:49 Collecting importlib-metadata>=4.8 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached importlib_metadata-8.2.0-py3-none-any.whl.metadata (4.7 kB)
09:32:49 Collecting docutils<0.20,>=0.14 (from sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached docutils-0.17.1-py2.py3-none-any.whl.metadata (2.9 kB)
09:32:49 Collecting zipp>=0.5 (from importlib-metadata>=4.8->sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached zipp-3.19.2-py3-none-any.whl.metadata (3.6 kB)
09:32:49 Collecting MarkupSafe>=2.0 (from Jinja2>=3.0->sphinx==5.3.0->-r requirements.txt (line 1))
09:32:49 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
09:32:49 Requirement already satisfied: charset-normalizer<4,>=2 in ./venv/lib/python3.9/site-packages (from requests>=2.5.0->sphinx==5.3.0->-r requirements.txt (line 1)) (3.3.2)
09:32:49 Requirement already satisfied: idna<4,>=2.5 in ./venv/lib/python3.9/site-packages (from requests>=2.5.0->sphinx==5.3.0->-r requirements.txt (line 1)) (3.7)
09:32:49 Requirement already satisfied: urllib3<3,>=1.21.1 in ./venv/lib/python3.9/site-packages (from requests>=2.5.0->sphinx==5.3.0->-r requirements.txt (line 1)) (1.26.19)
09:32:49 Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib/python3.9/site-packages (from requests>=2.5.0->sphinx==5.3.0->-r requirements.txt (line 1)) (2024.7.4)
09:32:49 Using cached sphinx-5.3.0-py3-none-any.whl (3.2 MB)
09:32:49 Using cached sphinx_rtd_theme-1.1.1-py2.py3-none-any.whl (2.8 MB)
09:32:49 Using cached alabaster-0.7.16-py3-none-any.whl (13 kB)
09:32:49 Using cached Babel-2.15.0-py3-none-any.whl (9.6 MB)
09:32:49 Using cached docutils-0.17.1-py2.py3-none-any.whl (575 kB)
09:32:49 Using cached imagesize-1.4.1-py2.py3-none-any.whl (8.8 kB)
09:32:49 Using cached importlib_metadata-8.2.0-py3-none-any.whl (25 kB)
09:32:49 Using cached jinja2-3.1.4-py3-none-any.whl (133 kB)
09:32:49 Using cached packaging-24.1-py3-none-any.whl (53 kB)
09:32:49 Using cached pygments-2.18.0-py3-none-any.whl (1.2 MB)
09:32:49 Using cached snowballstemmer-2.2.0-py2.py3-none-any.whl (93 kB)
09:32:49 Using cached sphinxcontrib_htmlhelp-2.1.0-py3-none-any.whl (98 kB)
09:32:49 Using cached sphinxcontrib_serializinghtml-2.0.0-py3-none-any.whl (92 kB)
09:32:49 Using cached sphinxcontrib_applehelp-2.0.0-py3-none-any.whl (119 kB)
09:32:49 Using cached sphinxcontrib_devhelp-2.0.0-py3-none-any.whl (82 kB)
09:32:49 Using cached sphinxcontrib_jsmath-1.0.1-py2.py3-none-any.whl (5.1 kB)
09:32:49 Using cached sphinxcontrib_qthelp-2.0.0-py3-none-any.whl (88 kB)
09:32:49 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB)
09:32:49 Using cached zipp-3.19.2-py3-none-any.whl (9.0 kB)
09:32:49 Installing collected packages: snowballstemmer, zipp, sphinxcontrib-serializinghtml, sphinxcontrib-qthelp, sphinxcontrib-jsmath, sphinxcontrib-htmlhelp, sphinxcontrib-devhelp, sphinxcontrib-applehelp, Pygments, packaging, MarkupSafe, imagesize, docutils, babel, alabaster, Jinja2, importlib-metadata, sphinx, sphinx_rtd_theme
09:32:52 Successfully installed Jinja2-3.1.4 MarkupSafe-2.1.5 Pygments-2.18.0 alabaster-0.7.16 babel-2.15.0 docutils-0.17.1 imagesize-1.4.1 importlib-metadata-8.2.0 packaging-24.1 snowballstemmer-2.2.0 sphinx-5.3.0 sphinx_rtd_theme-1.1.1 sphinxcontrib-applehelp-2.0.0 sphinxcontrib-devhelp-2.0.0 sphinxcontrib-htmlhelp-2.1.0 sphinxcontrib-jsmath-1.0.1 sphinxcontrib-qthelp-2.0.0 sphinxcontrib-serializinghtml-2.0.0 zipp-3.19.2
09:32:52 + cd omero
09:32:52 + make clean html linkcheck
09:32:52 rm -rf _build/*
09:32:52 sphinx-build -b html -d _build/doctrees . _build/html
09:32:53 Running Sphinx v5.3.0
09:32:53 making output directory... done
09:32:53 building [mo]: targets for 0 po files that are out of date
09:32:53 building [html]: targets for 159 source files that are out of date
09:32:53 updating environment: [new config] 159 added, 0 changed, 0 removed
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09:33:27 (developers/Clients/ImportLibrary: line 48) redirect https://docs.openmicroscopy.org/latest/ome-model/omero-pyramid/ - with Found to https://ome-model.readthedocs.io/en/stable/omero-pyramid/
09:33:27 (developers/Clients/ImportLibrary: line 48) redirect https://docs.openmicroscopy.org/bio-formats/7.3.1/formats/aperio-svs-tiff.html - with Found to https://bio-formats.readthedocs.io/en/v7.3.1/formats/aperio-svs-tiff.html
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09:33:27 (sysadmins/public: line 229) redirect http://dx.doi.org/10.17867/10000109 - with Found to https://omero.lifesci.dundee.ac.uk/webclient/login/?url=%2Fwebclient%2F%3Fshow%3Dproject-27936
09:33:27 (sysadmins/version-requirements: line 493) ok http://nginx.org/packages/centos/9/x86_64/
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09:33:39 (sysadmins/UpgradeCheck: line 12) redirect https://docs.openmicroscopy.org/bio-formats/7.3.1/users/comlinetools/index.html#version-checker - with Found to https://bio-formats.readthedocs.io/en/v7.3.1/users/comlinetools/index.html#version-checker
09:33:39 (developers/Model/Units: line 11) redirect https://docs.openmicroscopy.org/latest/ome-model/developers/ome-units.html - with Found to https://ome-model.readthedocs.io/en/stable/developers/ome-units.html
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09:33:39 (sysadmins/limitations: line 61) redirect https://docs.openmicroscopy.org/latest/bio-formats/users/comlinetools/conversion.html - with Found to https://bio-formats.readthedocs.io/en/stable/users/comlinetools/conversion.html
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09:33:40 (sysadmins/server-upgrade: line 17) redirect https://docs.openmicroscopy.org/latest/omero5.5/sysadmins/server-upgrade.html - permanently to https://docs.openmicroscopy.org/omero/5.5.1/sysadmins/server-upgrade.html
09:33:40 ( index: line 35) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/
09:33:40 (developers/Server/LightAdmins: line 204) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/ome/services/blitz/repo/RepositoryDaoImpl.html
09:33:40 (developers/Model/Containers: line 8) redirect https://docs.openmicroscopy.org/latest/ome-model/schemas/june-2016.html - with Found to https://ome-model.readthedocs.io/en/stable/schemas/june-2016.html
09:33:40 (developers/Server/GraphsImpl: line 70) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/BaseGraphPolicyAdjuster.html
09:33:40 (developers/Server/GraphsImpl: line 48) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/BaseGraphTraversalProcessor.html
09:33:40 (developers/Server/GraphsImpl: line 77) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/ChildOptionsPolicy.html
09:33:40 (developers/Server/GraphsImpl: line 100) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/GraphHelper.html
09:33:40 (developers/Server/GraphsImpl: line 100) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/GraphRequestFactory.html
09:33:40 (developers/Server/GraphsImpl: line 100) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/GraphUtil.html
09:33:40 (developers/Server/GraphsImpl: line 48) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/NullGraphTraversalProcessor.html
09:33:40 (developers/Server/GraphsImpl: line 83) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/SkipHeadPolicy.html
09:33:40 (developers/Server/GraphsImpl: line 86) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/cmd/graphs/SkipTailPolicy.html
09:33:40 (developers/Model/Units: line 16) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/ElectricPotentialI.html
09:33:40 (developers/Model/Units: line 17) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/FrequencyI.html
09:33:40 (developers/Model/Units: line 18) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/LengthI.html
09:33:40 (developers/Model/Units: line 19) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/PowerI.html
09:33:40 (developers/Model/Units: line 20) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/PressureI.html
09:33:40 ( sysadmins/index: line 15) redirect https://docs.openmicroscopy.org/latest/ome-model/specifications/ - with Found to https://ome-model.readthedocs.io/en/stable/specifications/
09:33:40 (developers/Model/Units: line 22) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/TimeI.html
09:33:40 (developers/Model/Units: line 21) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/javadoc/omero/model/TemperatureI.html
09:33:40 ( index: line 35) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/
09:33:40 (developers/Modules/Api: line 126) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api.html
09:33:40 (developers/Modules/Api: line 50) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IConfig.html
09:33:40 (developers/Modules/Api: line 45) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IAdmin.html
09:33:40 (developers/Modules/Api: line 57) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ILdap.html
09:33:40 (developers/Modules/Api: line 54) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IContainer.html
09:33:40 (developers/Modules/Api: line 61) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IMetadata.html
09:33:40 (developers/Modules/Api: line 64) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IPixels.html
09:33:40 (developers/Modules/Api: line 67) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IProjection.html
09:33:40 (developers/Modules/Api: line 70) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IQuery.html
09:33:40 (developers/Modules/Api: line 74) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IRenderingSettings.html
09:33:40 (developers/Modules/Api: line 77) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IRepositoryInfo.html
09:33:40 (developers/GettingStarted/AdvancedClientDevelopment: line 477) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IQuery.html#projection
09:33:40 (developers/GettingStarted/AdvancedClientDevelopment: line 366) redirect https://docs.openmicroscopy.org/latest/ome-model/ome-xml/ - with Found to https://ome-model.readthedocs.io/en/stable/ome-xml/
09:33:40 (developers/Modules/Api: line 83) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IScript.html
09:33:40 (developers/Modules/Api: line 86) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ISession.html
09:33:40 (developers/Modules/Api: line 80) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IRoi.html
09:33:40 (developers/Modules/Api: line 89) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IShare.html
09:33:40 (developers/Modules/Api: line 94) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ITypes.html
09:33:40 (developers/Modules/Api: line 91) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ITimeline.html
09:33:40 (developers/Modules/Api: line 97) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/IUpdate.html
09:33:40 (developers/Modules/Api: line 111) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/RawFileStore.html
09:33:40 (developers/Modules/Api: line 114) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/RawPixelsStore.html
09:33:40 (developers/Modules/Api: line 117) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/RenderingEngine.html
09:33:40 (developers/Modules/Api: line 16) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ServiceFactory.html
09:33:40 (developers/PythonBlitzGateway: line 111) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ServiceFactory.html#createRenderingEngine
09:33:40 (developers/PythonBlitzGateway: line 111) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ServiceFactory.html#getQueryService
09:33:40 (developers/Server/GraphRequests: line 83) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/Chmod2.html
09:33:40 (developers/Server/GraphRequests: line 75) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/Chgrp2.html
09:33:40 (developers/Modules/Api: line 121) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/api/ThumbnailStore.html
09:33:40 (developers/Server/GraphRequests: line 88) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/Delete2.html
09:33:40 (developers/Server/GraphRequests: line 79) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/Chown2.html
09:33:40 (developers/Server/GraphRequests: line 96) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/Duplicate.html
09:33:40 (developers/Server/GraphRequests: line 27) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/DiskUsage2.html
09:33:40 (developers/Server/GraphRequests: line 42) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/FindChildren.html
09:33:40 (developers/Server/GraphRequests: line 59) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/GraphModify2.html
09:33:40 (developers/Server/GraphRequests: line 34) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/FindParents.html
09:33:40 (developers/Server/GraphRequests: line 6) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/GraphQuery.html
09:33:40 (developers/Server/GraphRequests: line 104) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/SkipHead.html
09:33:40 (developers/Tables: line 339) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/grid/Table.html
09:33:40 (developers/Server/GraphRequests: line 18) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/LegalGraphTargets.html
09:33:40 (developers/Server/GraphRequests: line 71) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/cmd/graphs/ChildOption.html
09:33:40 (developers/GettingStarted: line 136) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model.html
09:33:40 (developers/GettingStarted: line 161) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Annotation.html
09:33:40 (developers/Server/LightAdmins: line 22) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/AdminPrivilege.html
09:33:40 (developers/GettingStarted: line 179) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Channel.html
09:33:40 (developers/GettingStarted: line 150) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Dataset.html
09:33:40 (developers/GettingStarted: line 161) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/DatasetAnnotationLink.html
09:33:40 (developers/GettingStarted: line 150) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/DatasetImageLink.html
09:33:40 (developers/GettingStarted: line 161) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/CommentAnnotation.html
09:33:40 (developers/GettingStarted: line 161) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/FileAnnotation.html
09:33:40 (developers/GettingStarted: line 150) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Image.html
09:33:40 (developers/Server/Permissions: line 381) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canChgrp
09:33:40 (developers/Server/Permissions: line 380) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canAnnotate
09:33:40 (developers/Server/Permissions: line 384) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canEdit
09:33:40 (developers/Server/Permissions: line 382) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canChown
09:33:40 (developers/Server/Permissions: line 385) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canLink
09:33:40 (developers/Server/Permissions: line 383) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Permissions.html#canDelete
09:33:40 (sysadmins/config: line 1664) redirect https://docs.openmicroscopy.org/latest/omero/sysadmins/customization.html#download-restrictions - with Found to https://omero.readthedocs.io/en/stable/sysadmins/customization.html#download-restrictions
09:33:40 (developers/GettingStarted: line 161) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/ProjectAnnotationLink.html
09:33:40 (developers/GettingStarted: line 150) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/ProjectDatasetLink.html
09:33:40 (developers/GettingStarted: line 179) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Pixels.html
09:33:40 (developers/Server/LightAdmins: line 160) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/sys/EventContext.html
09:33:40 (developers/GettingStarted: line 150) ok https://docs.openmicroscopy.org/omero-blitz/5.7.3/slice2html/omero/model/Project.html
09:33:40 ( developers/Java: line 44) ok https://docs.openmicroscopy.org/omero-gateway/5.9.1/javadoc/omero/gateway/Gateway.html
09:33:40 ( developers/Java: line 52) ok https://docs.openmicroscopy.org/omero-gateway/5.9.1/javadoc/omero/gateway/facility/BrowseFacility.html
09:33:40 ( developers/Java: line 52) ok https://docs.openmicroscopy.org/omero-gateway/5.9.1/javadoc//omero/gateway/facility/package-summary.html
09:33:40 ( developers/Java: line 57) ok https://docs.openmicroscopy.org/omero-gateway/5.9.1/javadoc/omero/gateway/model/DataObject.html
09:33:40 (developers/Model/EveryObject: line 24) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/IEnum.html
09:33:40 (developers/Model/EveryObject: line 92) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/ILink.html
09:33:40 (developers/Model/EveryObject: line 54) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/IMutable.html
09:33:40 (developers/Model/EveryObject: line 467) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Frequency.html
09:33:40 (developers/Model/EveryObject: line 425) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/ElectricPotential.html
09:33:40 (developers/Model/EveryObject: line 580) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Length.html
09:33:40 (developers/Model/EveryObject: line 1190) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Pressure.html
09:33:40 (developers/Model/EveryObject: line 114) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Power.html
09:33:40 (developers/Server/LightAdmins: line 219) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/logic/AdminImpl.html
09:33:40 (developers/Model/EveryObject: line 2238) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Time.html
09:33:40 (developers/Model/EveryObject: line 1190) ok https://docs.openmicroscopy.org/omero-model/5.6.14/javadoc/ome/model/units/Temperature.html
09:33:40 (developers/Server/LightAdmins: line 219) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/security/basic/BasicACLVoter.html
09:33:40 (developers/Server/LightAdmins: line 219) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/security/basic/OmeroInterceptor.html
09:33:40 (developers/Server/LightAdmins: line 102) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/security/basic/LightAdminPrivilegesSecurityFilter.html
09:33:40 (developers/Server/LightAdmins: line 242) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/security/basic/LightAdminPrivilegesCleanup.html
09:33:40 (developers/Server/GraphsImpl: line 11) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphPathBean.html
09:33:40 (developers/Server/GraphsImpl: line 60) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphPolicyRule.html
09:33:40 (developers/Server/GraphsImpl: line 11) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphPathReport.html
09:33:40 (developers/Server/GraphsImpl: line 60) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphPolicy.html
09:33:40 (developers/Server/GraphsImpl: line 32) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphTraversal.PlanExecutor.html
09:33:40 (developers/Server/GraphsImpl: line 88) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphPolicyRulePredicate.html
09:33:40 (developers/Server/GraphsImpl: line 22) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphTraversal.html
09:33:40 (developers/Server/GraphsImpl: line 32) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GraphTraversal.Processor.html
09:33:40 (developers/Server/GraphsImpl: line 88) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/PermissionsPredicate.html
09:33:40 (developers/Server/GraphsImpl: line 42) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/ModelObjectSequencer.html
09:33:40 (developers/Server/GraphsImpl: line 88) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/graphs/GroupPredicate.html
09:33:40 (developers/Server/LightAdmins: line 236) ok https://docs.openmicroscopy.org/omero-server/5.6.11/javadoc/ome/services/util/DBUserCheck.html
09:33:40 ( users/history: line 1017) ok https://docs.openmicroscopy.org/omero/5.3.0/developers/whatsnew.html
09:33:40 (sysadmins/whatsnew: line 16) redirect https://docs.openmicroscopy.org/omero/5.5/sysadmins/whatsnew.html - permanently to https://docs.openmicroscopy.org/omero/5.5.1/sysadmins/whatsnew.html
09:33:41 (sysadmins/config: line 2205) redirect https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples - with Found to https://omero.readthedocs.io/en/stable/sysadmins/grid.html#deployment-examples
09:33:41 (sysadmins/server-ldap: line 318) ok https://docs.oracle.com/javase/jndi/tutorial/ldap/referral/jndi.html
09:33:41 (sysadmins/config: line 811) ok https://docs.oracle.com/javase/jndi/tutorial/ldap/connect/create.html
09:33:41 (users/cli/import-target: line 157) ok https://docs.oracle.com/javase/7/docs/api/java/util/regex/Pattern.html
09:33:41 (developers/Modules/Api: line 223) ok https://docs.oracle.com/javase/tutorial/java/annotations/basics.html
09:33:41 (sysadmins/config: line 924) ok https://docs.oracle.com/javase/tutorial/jndi/newstuff/readtimeout.html
09:33:41 (developers/testing: line 45) ok https://docs.pytest.org/en/latest/
09:33:41 (sysadmins/dropbox: line 152) ok https://docs.python.org/2.7/library/site.html
09:33:41 (developers/testing: line 342) ok https://docs.pytest.org/en/latest/how-to/usage.html
09:33:41 (sysadmins/config: line 1011) ok https://docs.python.org/3/library/logging.html#levels
09:33:41 (sysadmins/python3-migration: line 84) ok https://downloads.openmicroscopy.org
09:33:41 (sysadmins/version-requirements: line 248) ok https://download.postgresql.org/pub/repos/yum/12/redhat/rhel-9-x86_64/
09:33:41 (sysadmins/UpgradeCheck: line 29) redirect https://downloads.openmicroscopy.org/latest/omero - permanently to https://downloads.openmicroscopy.org/omero/5.6.12/
09:33:41 (sysadmins/unix/server-install-homebrew: line 204) redirect https://downloads.openmicroscopy.org/latest/omero/artifacts/ - permanently to https://downloads.openmicroscopy.org/omero/5.6.12/artifacts/
09:33:41 (developers/GettingStarted: line 56) redirect https://downloads.openmicroscopy.org/latest/omero5.5/ - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/
09:33:41 (developers/analysis: line 12) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/ - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/
09:33:41 ( index: line 35) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/python/ - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/python/
09:33:41 (developers/Server/Aop: line 77) redirect https://docs.spring.io/spring/docs/2.0.x/reference/aop.html - permanently to https://docs.spring.io/spring-framework/docs/2.0.x/reference/aop.html
09:33:41 (developers/PythonBlitzGateway: line 91) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/python/omero/omero.gateway.html - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/python/omero/omero.gateway.html
09:33:41 (developers/PythonBlitzGateway: line 171) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/python/omero/omero.gateway.html#omero.gateway.ImageWrapper - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/python/omero/omero.gateway.html#omero.gateway.ImageWrapper
09:33:42 (sysadmins/version-requirements: line 195) ok https://download.rockylinux.org/pub/rocky/9/BaseOS/x86_64/os/Packages/
09:33:42 (developers/PythonBlitzGateway: line 19) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/python/omero/omero.gateway.html#omero.gateway._BlitzGateway - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/python/omero/omero.gateway.html#omero.gateway._BlitzGateway
09:33:42 (developers/PythonBlitzGateway: line 123) redirect https://downloads.openmicroscopy.org/latest/omero5.5/api/python/omero/omero.gateway.html#omero.gateway._BlitzGateway._createProxies - permanently to https://downloads.openmicroscopy.org/omero/5.5.1/api/python/omero/omero.gateway.html#omero.gateway._BlitzGateway._createProxies
09:33:42 (developers/Server/HowToCreateAService: line 101) redirect https://docs.spring.io/spring/docs/2.0.x/reference/beans.html#beans-factory-scopes-singleton - permanently to https://docs.spring.io/spring-framework/docs/2.0.x/reference/beans.html#beans-factory-scopes-singleton
09:33:42 (developers/GettingStarted/AdvancedClientDevelopment: line 477) ok https://downloads.openmicroscopy.org/presentations/2017/Team-Training/Hibernate/
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09:33:42 (sysadmins/server-ldap: line 322) ok https://en.wikipedia.org/wiki/Active_Directory
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09:33:42 (sysadmins/config: line 2835) ok https://en.wikipedia.org/wiki/List_of_tz_database_time_zones
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09:33:43 (sysadmins/python3-migration: line 52) ok https://galaxy.ansible.com/ome
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09:33:43 ( developers/Web: line 73) ok https://github.com/German-BioImaging/omero-autotag
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09:33:47 (developers/Web/CreateApp: line 35) ok https://omero.readthedocs.io/en/latest/developers/Python.html
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09:33:52 (sysadmins/unix/server-installation: line 472) ok https://www.openmicroscopy.org/community/viewtopic.php?f=5&t=360#p922
09:33:52 (sysadmins/server-performance: line 187) ok https://www.nagios.org/
09:33:52 (sysadmins/server-upgrade: line 256) ok https://www.openmicroscopy.org/community/viewtopic.php?f=5&t=7778
09:33:52 (sysadmins/troubleshooting: line 284) ok https://www.openmicroscopy.org/community/viewtopic.php?f=6&t=7722&p=15264&hilit=CheckedPath#p15264
09:33:52 ( users/index: line 59) ok https://www.openmicroscopy.org/explore/
09:33:52 (sysadmins/unix/install-web/walkthrough/omeroweb-install-rockylinux9-ice3.6: line 77) ok https://www.openmicroscopy.org/omero/apps/
09:33:52 (users/clients-overview: line 28) ok https://www.openmicroscopy.org/omero/analyze
09:33:52 (developers/Matlab: line 12) ok https://www.openmicroscopy.org/omero/downloads/
09:33:52 (sysadmins/unix/install-web/walkthrough/omeroweb-install-rockylinux9-ice3.6: line 77) ok https://www.openmicroscopy.org/omero/figure/
09:33:52 (sysadmins/public: line 97) ok https://www.openmicroscopy.org/omero/iviewer/
09:33:52 ( users/index: line 54) ok https://www.openmicroscopy.org/omero/new
09:33:52 ( users/index: line 54) ok https://www.openmicroscopy.org/omero/scientists
09:33:52 (sysadmins/server-security: line 21) ok https://www.openmicroscopy.org/security/
09:33:52 ( index: line 28) ok https://www.openmicroscopy.org/security/advisories/
09:33:52 ( users/history: line 1751) ok https://www.openmicroscopy.org/security/advisories/2012-SV1-ldap-authentication
09:33:52 ( users/history: line 1583) ok https://www.openmicroscopy.org/security/advisories/2014-SV1-unicode-passwords
09:33:52 ( users/history: line 1584) ok https://www.openmicroscopy.org/security/advisories/2014-SV2-empty-passwords
09:33:52 ( users/history: line 1544) ok https://www.openmicroscopy.org/security/advisories/2014-SV3-csrf
09:33:52 ( users/history: line 1545) ok https://www.openmicroscopy.org/security/advisories/2014-SV4-poodle
09:33:52 ( users/history: line 1089) ok https://www.openmicroscopy.org/security/advisories/2016-SV1-cleanse
09:33:52 ( users/history: line 1074) ok https://www.openmicroscopy.org/security/advisories/2016-SV2-share
09:33:52 ( users/history: line 1027) ok https://www.openmicroscopy.org/security/advisories/2017-SV1-filename
09:33:52 ( users/history: line 1031) ok https://www.openmicroscopy.org/security/advisories/2017-SV2-edit-rw
09:33:52 ( users/history: line 1034) ok https://www.openmicroscopy.org/security/advisories/2017-SV3-delete-script
09:33:52 ( users/history: line 853) ok https://www.openmicroscopy.org/security/advisories/2017-SV4-guest-user
09:33:52 (sysadmins/server-upgrade: line 135) ok https://www.openmicroscopy.org/security/advisories/2017-SV5-filename-2
09:33:52 ( users/history: line 638) ok https://www.openmicroscopy.org/security/advisories/2017-SV6-job-file-link
09:33:52 (developers/Modules/Api: line 28) ok https://www.openmicroscopy.org/support/
09:33:52 (sysadmins/version-requirements: line 395) ok https://www.oracle.com/technetwork/java/eol-135779.html
09:33:52 (sysadmins/in-place-import: line 292) ok https://www.openwall.com/lists/kernel-hardening/2012/02/21/20
09:33:52 (sysadmins/server-backup-and-restore: line 162) redirect https://www.nongnu.org/rdiff-backup/docs.html - with Found to https://rdiff-backup.net/
09:33:52 (sysadmins/unix/server-installation: line 124) redirect https://www.oracle.com/technetwork/java/javase/downloads/index.html - permanently to https://www.oracle.com/java/technologies/downloads/?er=221886
09:33:52 (developers/Server/ExtendingOmero: line 6) redirect https://www.openmicroscopy.org/forums - permanently to https://forum.image.sc/c/data-management/29
09:33:52 (developers/Server: line 32) redirect https://www.oracle.com/technetwork/java/javaee/ejb/index.html - permanently to https://www.oracle.com/java/technologies/enterprise-javabeans-technology.html
09:33:52 (developers/Web/LinkingFromWebclient: line 86) ok https://www.ncbi.nlm.nih.gov/protein/000397
09:33:53 (sysadmins/version-requirements: line 446) redirect https://www.oracle.com/technetwork/java/javase/downloads/index-jsp-138363.html - permanently to https://www.oracle.com/java/technologies/downloads/?er=221886
09:33:53 (developers/GettingStarted: line 126) ok https://www.pgadmin.org/
09:33:54 (sysadmins/version-requirements: line 264) ok https://www.postgresql.org/download/
09:33:54 (sysadmins/server-backup-and-restore: line 112) ok https://www.postgresql.org/docs/10/backup.html
09:33:54 ( users/cli/index: line 4) ok https://www.python.org
09:33:54 (sysadmins/unix/server-postgresql: line 140) redirect https://www.postgresql.org/docs/current/interactive/index.html - permanently to https://www.postgresql.org/docs/current/index.html
09:33:54 (sysadmins/version-requirements: line 288) redirect https://www.python.org/dev/peps/pep-0494/ - with Found to https://peps.python.org/pep-0494/
09:33:54 (sysadmins/version-requirements: line 293) redirect https://www.python.org/dev/peps/pep-0537/ - with Found to https://peps.python.org/pep-0537/
09:33:54 (developers/Web/CSRF: line 14) ok https://www.rfc-editor.org/rfc/rfc2616.html#section-9.1.1
09:33:54 (sysadmins/config: line 1446) ok https://www.quartz-scheduler.org/api/1.8.6/org/quartz/CronExpression.html
09:33:54 (sysadmins/unix/server-postgresql: line 143) redirect https://www.postgresql.org/docs/current/interactive/runtime-config-connection.html - permanently to https://www.postgresql.org/docs/current/runtime-config-connection.html
09:33:54 (sysadmins/unix/server-postgresql: line 12) ok https://www.postgresql.org/support/versioning/
09:33:54 (sysadmins/omeromovie: line 36) redirect https://www.scipy.org/install.html - permanently to https://scipy.org/install/
09:33:54 (sysadmins/unix/server-postgresql: line 145) redirect https://www.postgresql.org/docs/current/interactive/client-authentication.html - permanently to https://www.postgresql.org/docs/current/client-authentication.html
09:33:54 (sysadmins/server-syslog: line 52) ok https://www.splunk.com/
09:33:54 (developers/GettingStarted/AdvancedClientDevelopment: line 19) ok https://www.scons.org
09:33:54 (developers/logging: line 4) ok https://www.slf4j.org
09:33:54 (sysadmins/config: line 2395) ok https://www.w3.org/TR/referrer-policy/#referrer-policies
09:33:55 ( developers/Cpp: line 4) ok https://zeroc.com
09:33:55 (sysadmins/version-requirements: line 257) redirect https://yum.postgresql.org/15/redhat/rhel-9-x86_64/ - permanently to https://download.postgresql.org/pub/repos/yum/15/redhat/rhel-9-x86_64/
09:33:55 (sysadmins/version-requirements: line 254) redirect https://yum.postgresql.org/14/redhat/rhel-9-x86_64/ - permanently to https://download.postgresql.org/pub/repos/yum/14/redhat/rhel-9-x86_64/
09:33:55 (sysadmins/version-requirements: line 260) redirect https://yum.postgresql.org/16/redhat/rhel-9-x86_64/ - permanently to https://download.postgresql.org/pub/repos/yum/16/redhat/rhel-9-x86_64/
09:33:55 (developers/Python: line 7) ok https://zeroc.com/ice/downloads/3.6
09:33:55 (sysadmins/unix/server-installation: line 190) redirect https://zeroc.com/downloads/ice - temporarily to https://zeroc.com/ice/downloads/3.7
09:33:55 ( developers/Web: line 29) redirect https://zeroc.com/products/ice - permanently to https://zeroc.com/ice
09:33:55 Adding redirects:
09:33:55 build succeeded.
09:33:55
09:33:55 Look for any errors in the above output or in _build/linkcheck/output.txt
09:33:56
09:33:56 Link check complete; look for any errors in the above output or in _build/linkcheck/output.txt.
09:33:56 Archiving artifacts
09:33:57 Finished: SUCCESS
![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
